Rw7G036210

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
54680817 .. 54684630
3814 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G036210.1

Sequence Viewer

Length: 2859 bp
ATGGCCTCCTCCTCTTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCAGAAAAACGGTGGAGGTATGACGTGTTCTTGAGCTTCAGAGGTAAAGACACACGCAAGACCTTCACGGACAACCTCTATAGGGCATTAGAACGGGCCGGAGTCAACGCCTTCATGGACGACAGCGAACTCAAAAAAGGGGAAAATATAACAGCGGAACTGGAGCGGGCGATCCGCGGGTCTAGGATCTCTGTCATCGTCTTCTCAGAAAACTATGGGGATTCAAGTTGGTGTCTTGAGGAGCTGGTGCAGATCATGGAGTGTAAAAAAACACTGGGGCAATTGGTGTTCCCCATATTTTATCATGTTGATCCTTCACATGTCAGAAGACAGATTGGTATGTTTGGTCCGGCATTTGAGAAACATGAAGCTAGATATGTGGGTACAGATAAAGTATCCAGGTGGAGAACTGCTCTTCGGGGAGCCGCAAATTTGTCTGGCTTCGATATTGCTGGCAGATATGAGGGAGATTTTATCCATGACATTATTGGTGAGATCTGTGGTCGGCTGAACAACACATACTTGCATGTAGCTGACTACCCAGTTGGAATAGATTCACGTGTTGCATATATCAGTAATTCTTTATCTGTTGGATTAGATGATGTTCGCATGGTTGGAATTTGGGGTATGGGTGGAATTGGGAAAACATCACTTGCAAAAGCCATCTATAACAAGTATATTCATAGCTTTGAAAGTAAAAGTTTCCTTGCAAATGTTAGGGAAACTGCAAAGGATTCAAATGGTCTGATTACTTTGCAAGAAAGACTTCTCTCTGATATCTTAAAACCAACCAAGATAGAGCTAAGTAGTGTTCCCAGAGGAATTACTGTGATAAAAGAGAGACTTGGATTCAGAAAGGTACTTGTCATTGTTGATGATGTGGATCATGTGGACCAATTAAATGCATTAGCCATAAGGCATTACTCATTTGGTCCAGGAAGTCTAATTATAATAACAACAAGAGATCGACATTTGCTAGAGCAAATTTCAGTGGATACAATACATCTGACTCAAGAAATGAATGAAGAAGAAGCTTTTGAGTTCTTTAATTGGCATGCGTTTCAAAATCATTGTCCTAATGCAGGATTTTTGAATTTCTCGAAAATTTTGGGGTCTTTTCTCTTTAAAGGAAGCAAAAGAGATTGGGAGAGCACATTGGAGAAATTGAAAAAAATTCCTGATGACAAAATTCAGGATAAGCTCAGAATAAGCTTTGATGCAATTGATGAGAATCAGAAGGACATATTGCTCCATATATCTTGTTTCTTAATTGGAATGGACAGGAACTATGTCACACAAATCCTGCACGGCTGTGGTTATTTTGCAGAGACAGGAATCCGTGTCCTCATTCATCGTTGCCTTGTCACTGTTAATGAAAGAAACAAGCTCATGATGCATGATTTGCTTCGAGAAATGGGCAGAGAAGTTGTTCGTGCGGAGTCCCCCAAACGCCCTGAAAAACGTAGTAGATTGTGGCGCAAGGATGATGTAATAGATGTATTGACAGAAGAATCTGGCACTGAAGAGATTGAAGGACTCGCTTTAAATTTGCAAAGAACTGACAAGAAGAGTTTCAGTTCAAAAGCATTTACCAACATGAGGAGATTGAACTTGCTCCAACTCAACTATGTACAGCTCACTGGAGACTACGCCAATCTTTCGAAAAAGTTGATATGGCTCTGCTGGCGTGGATTCTCTCCGAACTTCATAGGAACGGAGTTTCTTAACCAAGGAAAACTGGTTTCTATCGACCTGTGGTACAGCAATCTCATAAAATTTTGGGAGCACTCCAGGCTGCTTGAGAAGTTAAAGATTCTTAATCTCCGTCATTCACATTACCTAACACAATCACCAGACTTTTCAAAACTCCCAAATCTTGAGTATTTGATTCTAAAAGACTGTGAGAGTTTGTCAGAGATAGACCAGTCTGTTGGACATCTTAAGAGACTTGCTTTGCTATATCTGAAAAACTGCAAAATGCTGAAGGACCTTCCAAGGAGTTCTTATAAATTAACATCTCTCAAAACTCTTGTTCTTTTTGGCTGTTCAAGATTTGAGAATTTGGGTGAGGACATTGGGAAGATGATATCATTGACAACTCTTCTTGTACATGGCACTGCCATGAGTCAAGTACCATCCTCTGTAGGAAGATTGCAAAACCTGAACTACTCATCTATGCAAGGCCTGATTCGCGTGAAGCTACGCTTCCCAGAACTTCCAAAACTCAGTGGCCTTTCCAATCTTGAATATCTACGTTTCAATAATATGGCAAACCTTCCTGCAAGCAGAGATTTACCAACTAGTCTGAAGGAGTTGGAAGTGGATCACTGCACTGCACTGGAAATAATTCCAAATATTTCAAAAACGGATGGACTGCAAGTGAAGATGGTGGCATTTTTCTCCCTGATATTCCAAAGTGGTTTGCGTATGTCAGAAAGACACATATCTCCAACTGGTATTTCCATTTTTGTTACAAATTACACCAAGCTCATTAACTTTGCTGTCCGGCCAGATCATCTCACTGAAATAACTTCAGATGAAGTGAATACAGGGGTCGGTCTAGTATGGGATCCCAAACTTGTCAATGAAAATAAGATAGAGAGTGAGCCTATCCCATATGAGTGTGAGTCATCACTTCATCCTGCCTCTTCATTTGATCATGACTTATCTGATGAGAACCGACCTTCACAAACGTCGAGGCAGGAGCAACAGCCCATGAGACTGCAAGTACACCAGCTCAAAAGTGGCTCAAGCTCACAAGCAAAACCCAAAGTCAGACATCGCAATCCTTGCAGTTGTTGGTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

952

Amino Acids

108.51

Weight (kDa)

8.57

Isoelectric Point (pI)

45.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 24 - 191 2e-50 TIR domain
TIR_2 PF13676 26 - 122 6.3e-18 TIR domain
NB-ARC PF00931 207 - 373 9.4e-17 NB-ARC domain
WHD_ROQ1 PF23282 426 - 498 7.8e-16 Disease resistance protein Roq1-like, winged-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1001, 2058
AccBSI CCGCTC 1 cut(s) 217
AccII CGCG 2 cut(s) 228, 2244
AciI CCGC 6 cut(s) 206, 217, 226, 228, 477, 1487
AclWI GGATC 7 cut(s) 217, 245, 356, 942, 2382, 2615, 2628
AcoI YGGCCR 1 cut(s) 2558
AcuI CTGAAG 5 cut(s) 73, 1593, 2054, 2378, 2568
AcvI CACGTG 1 cut(s) 611
AfaI GTAC 7 cut(s) 436, 912, 1683, 1811, 2160, 2184, 2781
AfiI CCNNNNNNNGG 3 cut(s) 133, 1133, 1650
AflII CTTAAG 1 cut(s) 1991
AflIII ACRYGT 3 cut(s) 75, 370, 610
AhlI ACTAGT 1 cut(s) 2351
AjiI CACGTC 1 cut(s) 76
AjnI CCWGG 3 cut(s) 449, 985, 1841
AjuI GAANNNNNNNTTGG 2 cut(s) 2494, 2526
AleI CACNNNNGTG 1 cut(s) 1362
Alw21I GWGCWC 2 cut(s) 1205, 1839
Alw26I GTCTC 5 cut(s) 886, 1373, 1689, 1990, 2764
AlwI GGATC 7 cut(s) 217, 245, 356, 942, 2382, 2615, 2628
AoxI GGCC 5 cut(s) 3, 147, 2233, 2281, 2558
ApeKI GCWGC 1 cut(s) 1846
ArsI GACNNNNNNTTYG 2 cut(s) 1108, 1140
Asp700I GAANNNNTTC 5 cut(s) 604, 816, 1479, 1622, 2397
AspLEI GCGC 1 cut(s) 1530
AspS9I GGNCC 5 cut(s) 147, 398, 943, 983, 2038
AsuHPI GGTGA 3 cut(s) 554, 1893, 2129
AsuII TTCGAA 1 cut(s) 1712
AvaII GGWCC 4 cut(s) 398, 943, 983, 2038
BamHI GGATCC 1 cut(s) 2620
BbrPI CACGTG 1 cut(s) 611
BbsI GAAGAC 2 cut(s) 244, 385
Bbv12I GWGCWC 2 cut(s) 1205, 1839
BbvI GCAGC 1 cut(s) 1833
BccI CCATC 4 cut(s) 722, 2194, 2414, 2431
BceAI ACGGC 1 cut(s) 1375
BciT130I CCWGG 3 cut(s) 451, 987, 1843
BciVI GTATCC 2 cut(s) 457, 1039
BclI TGATCA 1 cut(s) 2707
BcoDI GTCTC 5 cut(s) 886, 1373, 1689, 1990, 2764
BcuI ACTAGT 1 cut(s) 2351
BfaI CTAG 5 cut(s) 234, 423, 1028, 2352, 2612
BfmI CTRYAG 2 cut(s) 130, 2193
BfrI CTTAAG 1 cut(s) 1991
BfuI GTATCC 2 cut(s) 457, 1039
BglII AGATCT 1 cut(s) 546
BisI GCNGC 2 cut(s) 477, 1847
BlsI GCNGC 2 cut(s) 478, 1848
Bme1390I CCNGG 3 cut(s) 451, 987, 1843
Bme18I GGWCC 4 cut(s) 398, 943, 983, 2038
BmgBI CACGTC 1 cut(s) 76
BmgT120I GGNCC 5 cut(s) 147, 398, 943, 983, 2038
BmiI GGNNCC 2 cut(s) 475, 2622
BmrFI CCNGG 3 cut(s) 451, 987, 1843
BmrI ACTGGG 2 cut(s) 335, 587
BmsI GCATC 2 cut(s) 1258, 1434
BmuI ACTGGG 2 cut(s) 335, 587
BpiI GAAGAC 2 cut(s) 244, 385
BplI GAGNNNNNCTC 2 cut(s) 448, 480
BpmI CTGGAG 3 cut(s) 233, 1713, 1825
Bpu14I TTCGAA 1 cut(s) 1712
BpuEI CTTGAG 6 cut(s) 103, 308, 1047, 1871, 1949, 2785
BsaAI YACGTR 1 cut(s) 611
BsaBI GATNNNNATC 2 cut(s) 933, 1281
BsaJI CCNNGG 3 cut(s) 226, 1780, 2045
Bsc4I CCNNNNNNNGG 3 cut(s) 133, 1133, 1650
Bse1I ACTGG 8 cut(s) 216, 330, 593, 1696, 1794, 1975, 2394, 2509
Bse8I GATNNNNATC 2 cut(s) 933, 1281
BseBI CCWGG 3 cut(s) 451, 987, 1843
BseDI CCNNGG 3 cut(s) 226, 1780, 2045
BseGI GGATG 4 cut(s) 1540, 2186, 2425, 2689
BseJI GATNNNNATC 2 cut(s) 933, 1281
BseLI CCNNNNNNNGG 3 cut(s) 133, 1133, 1650
BseMII CTCAG 4 cut(s) 66, 270, 1267, 2290
BseNI ACTGG 8 cut(s) 216, 330, 593, 1696, 1794, 1975, 2394, 2509
BseXI GCAGC 1 cut(s) 1833
BsgI GTGCAG 4 cut(s) 320, 1340, 2365, 2370
Bsh1236I CGCG 2 cut(s) 228, 2244
BshFI GGCC 5 cut(s) 5, 149, 2235, 2283, 2560
BsiHKAI GWGCWC 2 cut(s) 1205, 1839
BsiSI CCGG 3 cut(s) 150, 401, 2557
BslFI GGGAC 1 cut(s) 1477
BslI CCNNNNNNNGG 3 cut(s) 133, 1133, 1650
BsmAI GTCTC 5 cut(s) 886, 1373, 1689, 1990, 2764
BsmFI GGGAC 1 cut(s) 1477
BsnI GGCC 5 cut(s) 5, 149, 2235, 2283, 2560
Bsp119I TTCGAA 1 cut(s) 1712
Bsp1286I GDGCHC 2 cut(s) 1205, 1839
Bsp1407I TGTACA 2 cut(s) 1681, 2158
BspACI CCGC 6 cut(s) 206, 217, 226, 228, 477, 1487
BspANI GGCC 5 cut(s) 5, 149, 2235, 2283, 2560
BspCNI CTCAG 4 cut(s) 65, 269, 1266, 2289
BspFNI CGCG 2 cut(s) 228, 2244
BspHI TCATGA 2 cut(s) 1440, 2710
BspLI GGNNCC 2 cut(s) 475, 2622
BspPI GGATC 7 cut(s) 217, 245, 356, 942, 2382, 2615, 2628
BspQI GCTCTTC 1 cut(s) 471
BspT104I TTCGAA 1 cut(s) 1712
BspTI CTTAAG 1 cut(s) 1991
BsrBI CCGCTC 1 cut(s) 217
BsrGI TGTACA 2 cut(s) 1681, 2158
BsrI ACTGG 8 cut(s) 216, 330, 593, 1696, 1794, 1975, 2394, 2509
BssECI CCNNGG 3 cut(s) 226, 1780, 2045
BssT1I CCWWGG 2 cut(s) 1780, 2045
Bst2UI CCWGG 3 cut(s) 451, 987, 1843
Bst4CI ACNGT 4 cut(s) 63, 880, 1420, 1952
Bst6I CTCTTC 7 cut(s) 19, 25, 471, 1569, 1613, 2157, 2704
BstAFI CTTAAG 1 cut(s) 1991
BstAPI GCANNNNNTGC 2 cut(s) 1453, 2841
BstAUI TGTACA 2 cut(s) 1681, 2158
BstBAI YACGTR 1 cut(s) 611
BstBI TTCGAA 1 cut(s) 1712
BstC8I GCNNGC 5 cut(s) 219, 505, 1107, 1736, 2335
BstDEI CTNAG 5 cut(s) 52, 256, 854, 1253, 2276
BstDSI CCRYGG 1 cut(s) 226
BstENI CCTNNNNNAGG 1 cut(s) 1131
BstF5I GGATG 4 cut(s) 1540, 2186, 2425, 2689
BstFNI CGCG 2 cut(s) 228, 2244
BstHHI GCGC 1 cut(s) 1530
BstMAI GTCTC 5 cut(s) 886, 1373, 1689, 1990, 2764
BstMWI GCNNNNNNNGC 6 cut(s) 1444, 1453, 1735, 1843, 2241, 2841
BstNI CCWGG 3 cut(s) 451, 987, 1843
BstNSI RCATGY 3 cut(s) 374, 581, 1109
BstSCI CCNGG 3 cut(s) 449, 985, 1841
BstSFI CTRYAG 2 cut(s) 130, 2193
BstUI CGCG 2 cut(s) 228, 2244
BstV1I GCAGC 1 cut(s) 1833
BstV2I GAAGAC 2 cut(s) 244, 385
BstX2I RGATCY 3 cut(s) 237, 546, 2620
BstXI CCANNNNNNTGG 1 cut(s) 1982
BstYI RGATCY 3 cut(s) 237, 546, 2620
BsuI GTATCC 2 cut(s) 457, 1039
BsuRI GGCC 5 cut(s) 5, 149, 2235, 2283, 2560
BtgI CCRYGG 1 cut(s) 226
BtgZI GCGATG 1 cut(s) 2816
BtrI CACGTC 1 cut(s) 76
BtsCI GGATG 4 cut(s) 1540, 2186, 2425, 2689
BtsI GCAGTG 3 cut(s) 2166, 2377, 2382
Cac8I GCNNGC 5 cut(s) 219, 505, 1107, 1736, 2335
CciI TCATGA 2 cut(s) 1440, 2710
CfoI GCGC 1 cut(s) 1530
Cfr13I GGNCC 5 cut(s) 147, 398, 943, 983, 2038
Cfr42I CCGCGG 1 cut(s) 229
Csp6I GTAC 7 cut(s) 435, 911, 1682, 1810, 2159, 2183, 2780
CviQI GTAC 7 cut(s) 435, 911, 1682, 1810, 2159, 2183, 2780
DdeI CTNAG 5 cut(s) 52, 256, 854, 1253, 2276
DraI TTTAAA 2 cut(s) 1177, 1596
EaeI YGGCCR 1 cut(s) 2558
Eam1104I CTCTTC 7 cut(s) 19, 25, 471, 1569, 1613, 2157, 2704
EarI CTCTTC 7 cut(s) 19, 25, 471, 1569, 1613, 2157, 2704
Eco130I CCWWGG 2 cut(s) 1780, 2045
Eco147I AGGCCT 1 cut(s) 2235
Eco32I GATATC 2 cut(s) 829, 2139
Eco47I GGWCC 4 cut(s) 398, 943, 983, 2038
Eco57I CTGAAG 5 cut(s) 73, 1593, 2054, 2378, 2568
Eco72I CACGTG 1 cut(s) 611
EcoNI CCTNNNNNAGG 1 cut(s) 1131
EcoO109I RGGNCCY 1 cut(s) 2038
EcoRII CCWGG 3 cut(s) 449, 985, 1841
EcoRV GATATC 2 cut(s) 829, 2139
EcoT14I CCWWGG 2 cut(s) 1780, 2045
EcoT22I ATGCAT 2 cut(s) 958, 1449
ErhI CCWWGG 2 cut(s) 1780, 2045
FalI AAGNNNNNCTT 8 cut(s) 801, 833, 879, 911, 2038, 2070, 2240, 2272
FaqI GGGAC 1 cut(s) 1477
FauI CCCGC 2 cut(s) 210, 221
FauNDI CATATG 1 cut(s) 2668
FbaI TGATCA 1 cut(s) 2707
Fnu4HI GCNGC 2 cut(s) 477, 1847
FokI GGATG 4 cut(s) 1547, 2173, 2432, 2676
Fsp4HI GCNGC 2 cut(s) 477, 1847
FspBI CTAG 5 cut(s) 234, 423, 1028, 2352, 2612
GlaI GCGC 1 cut(s) 1529
GluI GCNGC 2 cut(s) 477, 1847
GsuI CTGGAG 3 cut(s) 233, 1713, 1825
HaeIII GGCC 5 cut(s) 5, 149, 2235, 2283, 2560
HapII CCGG 3 cut(s) 150, 401, 2557
HhaI GCGC 1 cut(s) 1530
Hin6I GCGC 1 cut(s) 1528
HinP1I GCGC 1 cut(s) 1528
HincII GTYRAC 1 cut(s) 157
HindII GTYRAC 1 cut(s) 157
HindIII AAGCTT 2 cut(s) 1083, 1261
HpaII CCGG 3 cut(s) 150, 401, 2557
HphI GGTGA 3 cut(s) 554, 1893, 2129
Hpy166II GTNNAC 3 cut(s) 157, 943, 2782
Hpy8I GTNNAC 3 cut(s) 157, 943, 2782
Hpy99I CGWCG 1 cut(s) 2749
HpyCH4III ACNGT 4 cut(s) 63, 880, 1420, 1952
HpyCH4IV ACGT 5 cut(s) 75, 610, 1513, 2305, 2744
HpyF10VI GCNNNNNNNGC 6 cut(s) 1444, 1453, 1735, 1843, 2241, 2841
HpyF3I CTNAG 5 cut(s) 52, 256, 854, 1253, 2276
HpySE526I ACGT 5 cut(s) 75, 610, 1513, 2305, 2744
HspAI GCGC 1 cut(s) 1528
Ksp22I TGATCA 1 cut(s) 2707
KspI CCGCGG 1 cut(s) 229
LguI GCTCTTC 1 cut(s) 471
LmnI GCTCC 7 cut(s) 214, 292, 473, 1305, 1671, 1834, 2755
Lsp1109I GCAGC 1 cut(s) 1833
LweI GCATC 2 cut(s) 1258, 1434
MaeI CTAG 5 cut(s) 234, 423, 1028, 2352, 2612
MaeII ACGT 5 cut(s) 75, 610, 1513, 2305, 2744
MaeIII GTNAC 3 cut(s) 1342, 1414, 2521
MbiI CCGCTC 1 cut(s) 217
MfeI CAATTG 2 cut(s) 332, 1272
MflI RGATCY 3 cut(s) 237, 546, 2620
MhlI GDGCHC 2 cut(s) 1205, 1839
MlyI GAGTC 6 cut(s) 162, 1054, 1499, 1581, 2185, 2687
MmeI TCCRAC 7 cut(s) 577, 622, 646, 1693, 1963, 2346, 2525
Mph1103I ATGCAT 2 cut(s) 958, 1449
MroXI GAANNNNTTC 5 cut(s) 604, 816, 1479, 1622, 2397
MslI CAYNNNNRTG 3 cut(s) 1362, 2171, 2671
MspA1I CMGCKG 2 cut(s) 206, 228
MspCI CTTAAG 1 cut(s) 1991
MspI CCGG 3 cut(s) 150, 401, 2557
MspR9I CCNGG 3 cut(s) 451, 987, 1843
MunI CAATTG 2 cut(s) 332, 1272
MvaI CCWGG 3 cut(s) 451, 987, 1843
MvnI CGCG 2 cut(s) 228, 2244
MwoI GCNNNNNNNGC 6 cut(s) 1444, 1453, 1735, 1843, 2241, 2841
NdeI CATATG 1 cut(s) 2668
NlaIV GGNNCC 2 cut(s) 475, 2622
NmuCI GTSAC 2 cut(s) 1342, 1414
NsiI ATGCAT 2 cut(s) 958, 1449
NspI RCATGY 3 cut(s) 374, 581, 1109
NspV TTCGAA 1 cut(s) 1712
OliI CACNNNNGTG 1 cut(s) 1362
PaeI GCATGC 1 cut(s) 1109
PagI TCATGA 2 cut(s) 1440, 2710
PceI AGGCCT 1 cut(s) 2235
PciI ACATGT 1 cut(s) 370
PciSI GCTCTTC 1 cut(s) 471
PdmI GAANNNNTTC 5 cut(s) 604, 816, 1479, 1622, 2397
PfoI TCCNGGA 1 cut(s) 985
PkrI GCNGC 2 cut(s) 478, 1848
PleI GAGTC 6 cut(s) 161, 1054, 1498, 1581, 2184, 2686
PmaCI CACGTG 1 cut(s) 611
PmlI CACGTG 1 cut(s) 611
PpsI GAGTC 6 cut(s) 161, 1054, 1498, 1581, 2184, 2686
Ppu21I YACGTR 1 cut(s) 611
PpuMI RGGWCCY 1 cut(s) 2038
PscI ACATGT 1 cut(s) 370
PsiI TTATAA 2 cut(s) 1001, 2058
Psp5II RGGWCCY 1 cut(s) 2038
Psp6I CCWGG 3 cut(s) 449, 985, 1841
PspCI CACGTG 1 cut(s) 611
PspGI CCWGG 3 cut(s) 449, 985, 1841
PspN4I GGNNCC 2 cut(s) 475, 2622
PspPI GGNCC 5 cut(s) 147, 398, 943, 983, 2038
PspPPI RGGWCCY 1 cut(s) 2038
PsrI GAACNNNNNNTAC 4 cut(s) 62, 94, 554, 586
PsuI RGATCY 3 cut(s) 237, 546, 2620
RsaI GTAC 7 cut(s) 436, 912, 1683, 1811, 2160, 2184, 2781
RsaNI GTAC 7 cut(s) 435, 911, 1682, 1810, 2159, 2183, 2780
RseI CAYNNNNRTG 3 cut(s) 1362, 2171, 2671
SacII CCGCGG 1 cut(s) 229
SapI GCTCTTC 1 cut(s) 471
SatI GCNGC 2 cut(s) 477, 1847
Sau96I GGNCC 5 cut(s) 147, 398, 943, 983, 2038
SchI GAGTC 6 cut(s) 162, 1054, 1499, 1581, 2185, 2687
ScrFI CCNGG 3 cut(s) 451, 987, 1843
SduI GDGCHC 2 cut(s) 1205, 1839
SfaNI GCATC 2 cut(s) 1258, 1434
SfcI CTRYAG 2 cut(s) 130, 2193
Sfr303I CCGCGG 1 cut(s) 229
SfuI TTCGAA 1 cut(s) 1712
SgrBI CCGCGG 1 cut(s) 229
SinI GGWCC 4 cut(s) 398, 943, 983, 2038
SmiMI CAYNNNNRTG 3 cut(s) 1362, 2171, 2671
SmlI CTYRAG 7 cut(s) 82, 287, 1062, 1850, 1928, 1991, 2800
SmoI CTYRAG 7 cut(s) 82, 287, 1062, 1850, 1928, 1991, 2800
SpeI ACTAGT 1 cut(s) 2351
SphI GCATGC 1 cut(s) 1109
SseBI AGGCCT 1 cut(s) 2235
SsiI CCGC 6 cut(s) 206, 217, 226, 228, 477, 1487
SspI AATATT 1 cut(s) 2407
SspMI CTAG 5 cut(s) 234, 423, 1028, 2352, 2612
StuI AGGCCT 1 cut(s) 2235
StyD4I CCNGG 3 cut(s) 449, 985, 1841
StyI CCWWGG 2 cut(s) 1780, 2045
TaaI ACNGT 4 cut(s) 63, 880, 1420, 1952
TaiI ACGT 5 cut(s) 78, 613, 1516, 2308, 2747
TaqI TCGA 7 cut(s) 495, 1018, 1151, 1459, 1712, 1800, 2747
TaqII GACCGA 1 cut(s) 2597
TatI WGTACW 3 cut(s) 1681, 2158, 2779
TauI GCSGC 1 cut(s) 479
TseFI GTSAC 2 cut(s) 1342, 1414
TseI GCWGC 1 cut(s) 1846
Tsp45I GTSAC 2 cut(s) 1342, 1414
TspGWI ACGGA 5 cut(s) 134, 1379, 1781, 1865, 2432
Vha464I CTTAAG 1 cut(s) 1991
VpaK11BI GGWCC 4 cut(s) 398, 943, 983, 2038
XagI CCTNNNNNAGG 1 cut(s) 1131
XceI RCATGY 3 cut(s) 374, 581, 1109
XcmI CCANNNNNNNNNTGG 2 cut(s) 536, 2792
XmnI GAANNNNTTC 5 cut(s) 604, 816, 1479, 1622, 2397
XspI CTAG 5 cut(s) 234, 423, 1028, 2352, 2612
Zsp2I ATGCAT 2 cut(s) 958, 1449
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.