pycom10g02800

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0000055
Physical Location & Seq
Reverse (-)
3141246 .. 3146070
4825 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g02800.4

Sequence Viewer

Length: 3606 bp
ATGTTGACACTTGAAGTCTTAGGTTCTTATCTACGTACAAAAAGCACAAGTGAATGGGAAACTGTACTGGATAAATGGAAAAGATCACAGCCTTATCGGGAAATTCACGGAAGACTTGAAATAAGCTATGATAGGCTAACTGATGATGACGTGAAGGCTATATTCCTTGATATCTCTTGTTTCTTTACTGGAATGAACAAGGACTATGTTATGACAGTACTCGACGGCTGTCAGTTTTATCCGGAAATAGGGATTCGAGAACTCCAAGATCAGTGCCTTGTAACTGTTGATAAAGAAGGCAATCTCATGATGCATGATTTGATTCAAGGCATGGGCAGAGAAATCGTGCATGCAGAATCCCCTGACAATCCTGGAAAACGTAGTAGATTGTGGCATAATGAAGATATAACAGACGTATTGACGAAGGAATCTGGAACAGAAGACGTTGAAGGACTTGCTTTAGATATGCAAGAGTCCGGCAAGTCTAGCTTCAGTTCAGAATCATTTCGAAACATGCAGAGTCTGAGACTGCTCAAACTCAATAACGTAAAGCTCACTGGAAGTTACCACAATCTTTCCAAAGAGTTAAGATGGTTGTGTTGGCATGGTTTTCCTCTGGAGGTCTTACCAAAAGATTTTGATCAACCAAACCTAGTTGCTATTGACCTGAGCTATAGCAAACTCATACGAGTTTGGGAGGATTCTGATTTGTTGCTCGAGAAGTTGAAGCTTCTTAATGTCAGTCATTCCCATAACCTGGCACAAACACCAGACTTTTCAAAACTCCCAAATCTCGAGGAATTGATATTGAATGATTGTGAGAGTTTGTCTGAGGTTCACTCATCCATTGGGAATCTTGAAAGACTTACTTTGGTAAATCTTGAAGGCTGCAAAAATCTCAAGGATCTCCCACTGAATTTCTTTAATTCCAAGTCTATTGAAACTCTTCTTCTTAATGGCTGTTCAAGATTTGAAAACTTGGCTGAAGGCTTGGGACAGACCTACCATAAGACAGCAGATGGCACACCCATAAGACAAATACTAAAGCTGAGTTTTTCATCTCAATATGGTGTGAAAGAGTCACCATCAACTAGTCTTTTGCCCCCTTCTATACATTGCTTAAACTCTTTACGGAAATTAGATCTTGGATGCTGCACTTTAACCGATGACGAAATCCCAAAGGATCTTGGGAGTCTAATTTCTTTAGAAGATTTAGATCTTCGAAAAAATAGTTTTTGTAGCCTACCAAGCCTCAGTGGTCTTTCTAAGCTTGAAACATTGTGTTTAGATGATTGCACAAACCTACATGCAATCCCAAATTTACCAACAACTTTGAAAGTCTTGCGAGCGGGTTTGTGCACTGCATTAGAAACAATGCCAGATTTTTCAGAATTGTCGAATTTGAGAGAGTTGTATCTAAGTCATTCATGCAAACTCACAGAGATTTCGGGCTTGAATATGTCATTAAACTCGATGACAAGGGTTCATATGGAAGGGTGCATCAATCTCACTGCTAATTTTAGGAAGAACATCCTTCAGGGATGGACTTCTTGCGGATATGGTGGCATTTTTCTCAATGGAAATTATATTCCTGACTGGTTTGATTTTGTCAAGGGTGATCTGGTCAGTTTTCACATACCTCTAATTTTTGGTCGCAATTTTAGCGGGTTGACTCTGTACTGCATATACTCTTCGAAGAAACAACGTGAAGGTCCTCTCGGCATTATTGTTATCAATAAAACCAAGCGTACTGCTTTGCTCGCCCGGATAACATACGCTTCGGTACCAACTTCCTGTACACTTGATGACCATTATCTTTGGCAGGGACAGATATCGAACTATGTGCTCTGTCTGCAAGGAGGGGACAAGGTCGTTATAGTTGTAGTGCCTGTTGAAACTGCAGATGCTTCTGTGAGTGTGAAGAAATTAGGGGTTAATCTAGCATGGGACAAATTTATGAAGGAAAATATGCATGATTCAGACTTTCATCTATACGATTTTGGCCTACATCCGGATTGGTTATTGGGAGCTGATGGGTATGAAGGAATTAGTAGAGAACTGAGAAGCAATTACTTGGACGTAGCCATACACCCAGTTGGAATGGATTCTCGCGTGCAAAAAATCAGTAATTATTTAGATGTTGGAGGATCAAACGATGTCCGTATCATTGGAATCTGGGGTATGGGCGGACTGGGTAAAACAATGGTTGCAAAAGTAATTTTCAACAAATATCAGCACATGTTTGATGGTAGAAGTTTTCTTCCAAATGTGAGAAAAGATAAGGTTCTGGTTGATTCACAAAACAAACTTCTTTCTGATAGCTTGAGATCGGGAAACATGAAGGTTAGTAGGGTCGATGAGGAACTGGTTGATTCACAAAACAAACTTCTTTCTGATATCTTGAGATCGGGAAACATGAAGGTTAGTAGGGTCGATGAAGGGACCAAGGAGATTAAAAGAAGACTTGGCAACAAAAGAGTACTTGTCATAGTAGATGATGTAGACAGCGATGCACAATTAGATGCATTAGCTATAAAGCATGACTCATTTGGTCCAGGAAGTAGAATTATTATAACAACAAGGGATCAACATTTGCTAAAGATACTTAATGTGGAGGCGACATGTACTGTGCAAGAAATGAATAAAGAAGAAGCTCTTGAGCTACTTAGTTGGCATGCCTTTGGAAAGAATTATCCTAATGAAGAGTATGTTGAGCTCTCAAGAAAAGTTGTTGGCTACTGTGGAGGTTTGCCACTAGCACTTGAAGTCTTAGGTTCTTGTCTGCATAAAAAAAGCAGAAGTGAATGGAAAACTGAACTGGATAAATGGAAAAGATTACGGCCTTATTTCACCTTCAACAGCATGGATTATTTAATAGAAAAATATCCGAGAAGAGAGCTTCAACTCAAAGGTCCACGTCCAACGCCTCTCAAGATAAACAAAGACTCAGTCAAGATCAAGAAACCTCCAGTTGTACGCTCAAGTCCCCGAAGGTCATACGCTCAAGATTACAGCCTTACTTCACCATCACCGGTCGTAATCTACTCAGTGTCCCCGAAAGTCATACGCTCAAGTCCTAGCGGGCTCATGGACCTTGTCCAAAGCCTCACTGGCTTACCACCATCAAATTATTCCAATACATCTTCTTCCCCGCCCAGTAATATTAATCCTCCGAATTACGATAACTTTAATAAACCTCCGGCTCATGATCAAGGGATAAATAAAAGCAGTACTGCTCGAGATGTTGTGGAAGGAATGGAAATAATGGATGATGGTGGTGATGGTTGTGTGAGGCAAAAGGGTGTGTTTCGGGGGATCTTGTCGCCTGGGCCCGCTTCGATTACTCCGATTCCTTCAAACTTCTTCTCGCAGGCTGGGCCCGCTTGGATTACTCCGACTCCTTCAAACTTCTTCTCTCCGCCGGCGGGAGTCATACCTTTAGAAACAAAGAATGAAGATTATGTTGAGCACTCAGGAAAAGCTGTTGGCTACCGTGGAGGTTTGCCAATAGCACTTGAAGTCCTAGGTTCTTGTCTACATAAAAGAAGCACAAGTGAACGGGAAACTGTACTGGATAAATGGAAAGATCACAGCCCTGCCGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

1202

Amino Acids

134.39

Weight (kDa)

6.28

Isoelectric Point (pI)

49.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2573
Acc65I GGTACC 1 cut(s) 1783
AccB1I GGYRCC 1 cut(s) 1783
AccB7I CCANNNNNTGG 1 cut(s) 757
AccBSI CCGCTC 1 cut(s) 1349
AccI GTMKAC 2 cut(s) 2502, 3535
AccII CGCG 1 cut(s) 2112
AccIII TCCGGA 2 cut(s) 241, 2011
AclWI GGATC 5 cut(s) 912, 1191, 2155, 2592, 3323
AcsI RAATTY 5 cut(s) 102, 916, 1318, 1399, 1952
AcuI CTGAAG 3 cut(s) 475, 1005, 1520
AfiI CCNNNNNNNGG 4 cut(s) 248, 757, 2011, 3425
AflIII ACRYGT 2 cut(s) 2238, 2621
AgeI ACCGGT 1 cut(s) 3031
AhlI ACTAGT 1 cut(s) 1091
AjiI CACGTC 2 cut(s) 151, 2918
AjnI CCWGG 4 cut(s) 370, 756, 2554, 3325
Alw21I GWGCWC 4 cut(s) 1361, 1848, 2718, 3471
Alw26I GTCTC 1 cut(s) 520
Alw44I GTGCAC 1 cut(s) 1357
AlwI GGATC 5 cut(s) 912, 1191, 2155, 2592, 3323
AlwNI CAGNNNCTG 1 cut(s) 523
Ama87I CYCGRG 3 cut(s) 716, 794, 3237
Aor13HI TCCGGA 2 cut(s) 241, 2011
AoxI GGCC 4 cut(s) 2002, 2840, 3329, 3377
ApaI GGGCCC 2 cut(s) 3333, 3381
ApaLI GTGCAC 1 cut(s) 1357
ApeKI GCWGC 2 cut(s) 888, 1152
ApoI RAATTY 5 cut(s) 102, 916, 1318, 1399, 1952
ArsI GACNNNNNNTTYG 2 cut(s) 2934, 2966
AseI ATTAAT 1 cut(s) 3165
AsiGI ACCGGT 1 cut(s) 3031
Asp700I GAANNNNTTC 3 cut(s) 504, 945, 2104
Asp718I GGTACC 1 cut(s) 1783
AspA2I CCTAGG 1 cut(s) 3523
AspS9I GGNCC 9 cut(s) 1712, 2442, 2552, 2912, 3091, 3329, 3330, 3377, 3378
AsuC2I CCSGG 2 cut(s) 1765, 3601
AsuHPI GGTGA 6 cut(s) 1074, 1628, 2842, 3015, 3021, 3290
AsuII TTCGAA 3 cut(s) 508, 1222, 1694
AvaI CYCGRG 3 cut(s) 716, 794, 3237
AvaII GGWCC 5 cut(s) 1712, 2442, 2552, 2912, 3091
AvrII CCTAGG 1 cut(s) 3523
BaeGI GKGCMC 3 cut(s) 1361, 3333, 3381
BanI GGYRCC 1 cut(s) 1783
BanII GRGCYC 4 cut(s) 2718, 3087, 3333, 3381
BbsI GAAGAC 3 cut(s) 118, 447, 2467
Bbv12I GWGCWC 4 cut(s) 1361, 1848, 2718, 3471
BbvI GCAGC 2 cut(s) 875, 1139
BceAI ACGGC 2 cut(s) 241, 2855
BcgI CGANNNNNNTGC 4 cut(s) 325, 359, 1825, 1859
BciT130I CCWGG 4 cut(s) 372, 758, 2556, 3327
BclI TGATCA 2 cut(s) 640, 3208
BcnI CCSGG 2 cut(s) 1765, 3601
BcoDI GTCTC 1 cut(s) 520
BcuI ACTAGT 1 cut(s) 1091
BfaI CTAG 7 cut(s) 486, 653, 1092, 1940, 2756, 3078, 3524
BfmI CTRYAG 2 cut(s) 673, 1899
BglI GCCNNNNNGGC 1 cut(s) 3111
BglII AGATCT 2 cut(s) 1141, 1216
BisI GCNGC 2 cut(s) 889, 1153
BlnI CCTAGG 1 cut(s) 3523
BlsI GCNGC 2 cut(s) 890, 1154
BmcAI AGTACT 3 cut(s) 219, 2481, 3232
Bme1390I CCNGG 6 cut(s) 372, 758, 1765, 2556, 3327, 3601
Bme18I GGWCC 5 cut(s) 1712, 2442, 2552, 2912, 3091
BmeT110I CYCGRG 3 cut(s) 716, 794, 3237
BmgBI CACGTC 2 cut(s) 151, 2918
BmgT120I GGNCC 9 cut(s) 1712, 2442, 2552, 2912, 3091, 3329, 3330, 3377, 3378
BmiI GGNNCC 4 cut(s) 1785, 2443, 3331, 3379
BmrFI CCNGG 6 cut(s) 372, 758, 1765, 2556, 3327, 3601
BmrI ACTGGG 3 cut(s) 2087, 2201, 3150
BmsI GCATC 6 cut(s) 300, 1139, 1509, 1894, 2500, 2512
BmuI ACTGGG 3 cut(s) 2087, 2201, 3150
BoxI GACNNNNGTC 1 cut(s) 228
BpiI GAAGAC 3 cut(s) 118, 447, 2467
BplI GAGNNNNNCTC 2 cut(s) 824, 856
BpmI CTGGAG 2 cut(s) 638, 2952
Bpu10I CCTNAGC 1 cut(s) 668
Bpu14I TTCGAA 3 cut(s) 508, 1222, 1694
BpuEI CTTGAG 9 cut(s) 884, 2344, 2422, 2678, 2704, 2915, 2965, 2988, 3055
BpuMI CCSGG 2 cut(s) 1765, 3601
BsaAI YACGTR 1 cut(s) 35
BsaBI GATNNNNATC 2 cut(s) 639, 1215
BsaJI CCNNGG 4 cut(s) 2445, 3326, 3493, 3523
BsaWI WCCGGW 3 cut(s) 241, 2011, 3031
BsaXI ACNNNNNCTCC 2 cut(s) 3382, 3412
Bsc4I CCNNNNNNNGG 4 cut(s) 248, 757, 2011, 3425
Bse118I RCCGGY 2 cut(s) 3031, 3421
Bse3DI GCAATG 1 cut(s) 1114
Bse8I GATNNNNATC 2 cut(s) 639, 1215
BseAI TCCGGA 2 cut(s) 241, 2011
BseBI CCWGG 4 cut(s) 372, 758, 2556, 3327
BseDI CCNNGG 4 cut(s) 2445, 3326, 3493, 3523
BseGI GGATG 6 cut(s) 842, 1154, 1530, 1547, 2008, 3274
BseJI GATNNNNATC 2 cut(s) 639, 1215
BseLI CCNNNNNNNGG 4 cut(s) 248, 757, 2011, 3425
BseMI GCAATG 1 cut(s) 1114
BseMII CTCAG 9 cut(s) 515, 659, 822, 1040, 1267, 2051, 2961, 3060, 3486
BseSI GKGCMC 3 cut(s) 1361, 3333, 3381
BseXI GCAGC 2 cut(s) 875, 1139
BseYI CCCAGC 1 cut(s) 3374
BsgI GTGCAG 1 cut(s) 1138
Bsh1236I CGCG 1 cut(s) 2112
Bsh1285I CGRYCG 1 cut(s) 3036
BshFI GGCC 4 cut(s) 2004, 2842, 3331, 3379
BshNI GGYRCC 1 cut(s) 1783
BshTI ACCGGT 1 cut(s) 3031
BsiEI CGRYCG 1 cut(s) 3036
BsiHKAI GWGCWC 4 cut(s) 1361, 1848, 2718, 3471
BsiHKCI CYCGRG 3 cut(s) 716, 794, 3237
BsiSI CCGG 8 cut(s) 242, 477, 1765, 2012, 3032, 3200, 3422, 3600
BslFI GGGAC 7 cut(s) 1008, 1839, 1877, 1961, 2455, 2970, 3037
BslI CCNNNNNNNGG 4 cut(s) 248, 757, 2011, 3425
BsmAI GTCTC 1 cut(s) 520
BsmFI GGGAC 7 cut(s) 1008, 1839, 1877, 1961, 2455, 2970, 3037
BsnI GGCC 4 cut(s) 2004, 2842, 3331, 3379
BsoBI CYCGRG 3 cut(s) 716, 794, 3237
Bsp119I TTCGAA 3 cut(s) 508, 1222, 1694
Bsp120I GGGCCC 2 cut(s) 3329, 3377
Bsp1286I GDGCHC 7 cut(s) 1361, 1848, 2718, 3087, 3333, 3381, 3471
Bsp13I TCCGGA 2 cut(s) 241, 2011
Bsp1407I TGTACA 1 cut(s) 1796
BspANI GGCC 4 cut(s) 2004, 2842, 3331, 3379
BspCNI CTCAG 9 cut(s) 516, 660, 823, 1041, 1266, 2052, 2960, 3059, 3485
BspEI TCCGGA 2 cut(s) 241, 2011
BspFNI CGCG 1 cut(s) 2112
BspHI TCATGA 2 cut(s) 306, 3205
BspLI GGNNCC 4 cut(s) 1785, 2443, 3331, 3379
BspMAI CTGCAG 1 cut(s) 1903
BspPI GGATC 5 cut(s) 912, 1191, 2155, 2592, 3323
BspT104I TTCGAA 3 cut(s) 508, 1222, 1694
BspT107I GGYRCC 1 cut(s) 1783
BsrBI CCGCTC 1 cut(s) 1349
BsrDI GCAATG 1 cut(s) 1114
BsrFI RCCGGY 2 cut(s) 3031, 3421
BsrGI TGTACA 1 cut(s) 1796
BssAI RCCGGY 2 cut(s) 3031, 3421
BssECI CCNNGG 4 cut(s) 2445, 3326, 3493, 3523
BssT1I CCWWGG 2 cut(s) 2445, 3523
Bst2UI CCWGG 4 cut(s) 372, 758, 2556, 3327
Bst4CI ACNGT 7 cut(s) 64, 217, 286, 2629, 2741, 3494, 3568
Bst6I CTCTTC 4 cut(s) 951, 1696, 2697, 2887
BstAUI TGTACA 1 cut(s) 1796
BstBAI YACGTR 1 cut(s) 35
BstBI TTCGAA 3 cut(s) 508, 1222, 1694
BstDSI CCRYGG 1 cut(s) 3493
BstF5I GGATG 6 cut(s) 842, 1154, 1530, 1547, 2008, 3274
BstFNI CGCG 1 cut(s) 2112
BstMAI GTCTC 1 cut(s) 520
BstMCI CGRYCG 1 cut(s) 3036
BstMWI GCNNNNNNNGC 8 cut(s) 486, 1248, 1662, 1760, 1852, 3111, 3376, 3380
BstNI CCWGG 4 cut(s) 372, 758, 2556, 3327
BstNSI RCATGY 6 cut(s) 353, 517, 1310, 2242, 2625, 2678
BstPAI GACNNNNGTC 1 cut(s) 228
BstSCI CCNGG 6 cut(s) 370, 756, 1763, 2554, 3325, 3599
BstSFI CTRYAG 2 cut(s) 673, 1899
BstSLI GKGCMC 3 cut(s) 1361, 3333, 3381
BstSNI TACGTA 1 cut(s) 35
BstUI CGCG 1 cut(s) 2112
BstV1I GCAGC 2 cut(s) 875, 1139
BstV2I GAAGAC 3 cut(s) 118, 447, 2467
BstX2I RGATCY 5 cut(s) 904, 1141, 1183, 1216, 3315
BstYI RGATCY 5 cut(s) 904, 1141, 1183, 1216, 3315
BsuRI GGCC 4 cut(s) 2004, 2842, 3331, 3379
BtgI CCRYGG 1 cut(s) 3493
BtgZI GCGATG 1 cut(s) 2523
BtrI CACGTC 2 cut(s) 151, 2918
BtsCI GGATG 6 cut(s) 842, 1154, 1530, 1547, 2008, 3274
BtsI GCAGTG 2 cut(s) 1359, 1509
BtsIMutI CAGTG 8 cut(s) 278, 555, 911, 1261, 1359, 1509, 3054, 3108
CaiI CAGNNNCTG 1 cut(s) 523
CciI TCATGA 2 cut(s) 306, 3205
Cfr10I RCCGGY 2 cut(s) 3031, 3421
Cfr13I GGNCC 9 cut(s) 1712, 2442, 2552, 2912, 3091, 3329, 3330, 3377, 3378
CspAI ACCGGT 1 cut(s) 3031
Eam1104I CTCTTC 4 cut(s) 951, 1696, 2697, 2887
EarI CTCTTC 4 cut(s) 951, 1696, 2697, 2887
EciI GGCGGA 2 cut(s) 2202, 3408
Ecl136II GAGCTC 1 cut(s) 2716
Eco105I TACGTA 1 cut(s) 35
Eco130I CCWWGG 2 cut(s) 2445, 3523
Eco24I GRGCYC 4 cut(s) 2718, 3087, 3333, 3381
Eco32I GATATC 3 cut(s) 172, 1833, 2398
Eco47I GGWCC 5 cut(s) 1712, 2442, 2552, 2912, 3091
Eco53kI GAGCTC 1 cut(s) 2716
Eco57I CTGAAG 3 cut(s) 475, 1005, 1520
Eco88I CYCGRG 3 cut(s) 716, 794, 3237
EcoICRI GAGCTC 1 cut(s) 2716
EcoO109I RGGNCCY 1 cut(s) 1712
EcoRII CCWGG 4 cut(s) 370, 756, 2554, 3325
EcoRV GATATC 3 cut(s) 172, 1833, 2398
EcoT14I CCWWGG 2 cut(s) 2445, 3523
EcoT22I ATGCAT 3 cut(s) 315, 1974, 2527
EcoT38I GRGCYC 4 cut(s) 2718, 3087, 3333, 3381
ErhI CCWWGG 2 cut(s) 2445, 3523
FalI AAGNNNNNCTT 6 cut(s) 473, 505, 853, 885, 2640, 2672
FaqI GGGAC 7 cut(s) 1008, 1839, 1877, 1961, 2455, 2970, 3037
FauI CCCGC 7 cut(s) 1342, 1658, 3074, 3159, 3340, 3388, 3418
FauNDI CATATG 1 cut(s) 1488
FbaI TGATCA 2 cut(s) 640, 3208
FblI GTMKAC 2 cut(s) 2502, 3535
Fnu4HI GCNGC 2 cut(s) 889, 1153
FokI GGATG 6 cut(s) 829, 1161, 1517, 1554, 1995, 3281
FriOI GRGCYC 4 cut(s) 2718, 3087, 3333, 3381
Fsp4HI GCNGC 2 cut(s) 889, 1153
FspBI CTAG 7 cut(s) 486, 653, 1092, 1940, 2756, 3078, 3524
GluI GCNGC 2 cut(s) 889, 1153
GsaI CCCAGC 1 cut(s) 3378
GsuI CTGGAG 2 cut(s) 638, 2952
HaeIII GGCC 4 cut(s) 2004, 2842, 3331, 3379
HapII CCGG 8 cut(s) 242, 477, 1765, 2012, 3032, 3200, 3422, 3600
HincII GTYRAC 2 cut(s) 6, 1671
HindII GTYRAC 2 cut(s) 6, 1671
HindIII AAGCTT 2 cut(s) 728, 1268
HpaII CCGG 8 cut(s) 242, 477, 1765, 2012, 3032, 3200, 3422, 3600
HphI GGTGA 6 cut(s) 1074, 1628, 2842, 3015, 3021, 3290
Hpy166II GTNNAC 9 cut(s) 6, 838, 1359, 1671, 1799, 2503, 2915, 3536, 3557
Hpy8I GTNNAC 9 cut(s) 6, 838, 1359, 1671, 1799, 2503, 2915, 3536, 3557
Hpy99I CGWCG 1 cut(s) 227
HpyCH4III ACNGT 7 cut(s) 64, 217, 286, 2629, 2741, 3494, 3568
HpyCH4IV ACGT 9 cut(s) 34, 150, 379, 414, 444, 546, 1705, 2079, 2917
HpyF10VI GCNNNNNNNGC 8 cut(s) 486, 1248, 1662, 1760, 1852, 3111, 3376, 3380
HpySE526I ACGT 9 cut(s) 34, 150, 379, 414, 444, 546, 1705, 2079, 2917
Kpn2I TCCGGA 2 cut(s) 241, 2011
KpnI GGTACC 1 cut(s) 1787
KroI GCCGGC 1 cut(s) 3421
KroNI GCCGGC 1 cut(s) 3423
Ksp22I TGATCA 2 cut(s) 640, 3208
LmnI GCTCC 1 cut(s) 2027
Lsp1109I GCAGC 2 cut(s) 875, 1139
LweI GCATC 6 cut(s) 300, 1139, 1509, 1894, 2500, 2512
MaeI CTAG 7 cut(s) 486, 653, 1092, 1940, 2756, 3078, 3524
MaeII ACGT 9 cut(s) 34, 150, 379, 414, 444, 546, 1705, 2079, 2917
MaeIII GTNAC 3 cut(s) 280, 563, 1080
MbiI CCGCTC 1 cut(s) 1349
MflI RGATCY 5 cut(s) 904, 1141, 1183, 1216, 3315
MhlI GDGCHC 7 cut(s) 1361, 1848, 2718, 3087, 3333, 3381, 3471
MlyI GAGTC 9 cut(s) 482, 529, 1088, 1201, 1666, 2537, 2939, 3391, 3438
MmeI TCCRAC 4 cut(s) 2077, 2122, 2945, 3419
Mph1103I ATGCAT 3 cut(s) 315, 1974, 2527
MreI CGCCGGCG 1 cut(s) 3421
MroI TCCGGA 2 cut(s) 241, 2011
MroNI GCCGGC 1 cut(s) 3421
MroXI GAANNNNTTC 3 cut(s) 504, 945, 2104
MspI CCGG 8 cut(s) 242, 477, 1765, 2012, 3032, 3200, 3422, 3600
MspR9I CCNGG 6 cut(s) 372, 758, 1765, 2556, 3327, 3601
MvaI CCWGG 4 cut(s) 372, 758, 2556, 3327
MvnI CGCG 1 cut(s) 2112
MwoI GCNNNNNNNGC 8 cut(s) 486, 1248, 1662, 1760, 1852, 3111, 3376, 3380
NaeI GCCGGC 1 cut(s) 3423
NciI CCSGG 2 cut(s) 1765, 3601
NdeI CATATG 1 cut(s) 1488
NgoMIV GCCGGC 1 cut(s) 3421
NlaIV GGNNCC 4 cut(s) 1785, 2443, 3331, 3379
NmeAIII GCCGAG 1 cut(s) 1698
NmuCI GTSAC 1 cut(s) 1080
NsiI ATGCAT 3 cut(s) 315, 1974, 2527
NspI RCATGY 6 cut(s) 353, 517, 1310, 2242, 2625, 2678
NspV TTCGAA 3 cut(s) 508, 1222, 1694
PaeI GCATGC 2 cut(s) 353, 2678
PaeR7I CTCGAG 3 cut(s) 716, 794, 3237
PagI TCATGA 2 cut(s) 306, 3205
PciI ACATGT 2 cut(s) 2238, 2621
PcsI WCGNNNNNNNCGW 1 cut(s) 3344
PdiI GCCGGC 1 cut(s) 3423
PdmI GAANNNNTTC 3 cut(s) 504, 945, 2104
PflFI GACNNNGTC 3 cut(s) 1868, 2948, 3095
PflMI CCANNNNNTGG 1 cut(s) 757
PfoI TCCNGGA 2 cut(s) 370, 2554
PinAI ACCGGT 1 cut(s) 3031
PkrI GCNGC 2 cut(s) 890, 1154
PleI GAGTC 9 cut(s) 481, 528, 1087, 1200, 1666, 2537, 2939, 3391, 3437
PpsI GAGTC 9 cut(s) 481, 528, 1087, 1200, 1666, 2537, 2939, 3391, 3437
Ppu21I YACGTR 1 cut(s) 35
PpuMI RGGWCCY 1 cut(s) 1712
PscI ACATGT 2 cut(s) 2238, 2621
PshAI GACNNNNGTC 1 cut(s) 228
PshBI ATTAAT 1 cut(s) 3165
PsiI TTATAA 1 cut(s) 2573
Psp124BI GAGCTC 1 cut(s) 2718
Psp5II RGGWCCY 1 cut(s) 1712
Psp6I CCWGG 4 cut(s) 370, 756, 2554, 3325
PspFI CCCAGC 1 cut(s) 3374
PspGI CCWGG 4 cut(s) 370, 756, 2554, 3325
PspN4I GGNNCC 4 cut(s) 1785, 2443, 3331, 3379
PspOMI GGGCCC 2 cut(s) 3329, 3377
PspPI GGNCC 9 cut(s) 1712, 2442, 2552, 2912, 3091, 3329, 3330, 3377, 3378
PspPPI RGGWCCY 1 cut(s) 1712
PstI CTGCAG 1 cut(s) 1903
PstNI CAGNNNCTG 1 cut(s) 523
PsuI RGATCY 5 cut(s) 904, 1141, 1183, 1216, 3315
PsyI GACNNNGTC 3 cut(s) 1868, 2948, 3095
SacI GAGCTC 1 cut(s) 2718
SatI GCNGC 2 cut(s) 889, 1153
Sau96I GGNCC 9 cut(s) 1712, 2442, 2552, 2912, 3091, 3329, 3330, 3377, 3378
ScaI AGTACT 3 cut(s) 219, 2481, 3232
SchI GAGTC 9 cut(s) 482, 529, 1088, 1201, 1666, 2537, 2939, 3391, 3438
ScrFI CCNGG 6 cut(s) 372, 758, 1765, 2556, 3327, 3601
SduI GDGCHC 7 cut(s) 1361, 1848, 2718, 3087, 3333, 3381, 3471
SfaNI GCATC 6 cut(s) 300, 1139, 1509, 1894, 2500, 2512
SfcI CTRYAG 2 cut(s) 673, 1899
Sfr274I CTCGAG 3 cut(s) 716, 794, 3237
SfuI TTCGAA 3 cut(s) 508, 1222, 1694
SgrAI CRCCGGYG 1 cut(s) 3421
SinI GGWCC 5 cut(s) 1712, 2442, 2552, 2912, 3091
SlaI CTCGAG 3 cut(s) 716, 794, 3237
SnaBI TACGTA 1 cut(s) 35
SpeI ACTAGT 1 cut(s) 1091
SphI GCATGC 2 cut(s) 353, 2678
SspI AATATT 1 cut(s) 3163
SspMI CTAG 7 cut(s) 486, 653, 1092, 1940, 2756, 3078, 3524
SstI GAGCTC 1 cut(s) 2718
StyD4I CCNGG 6 cut(s) 370, 756, 1763, 2554, 3325, 3599
StyI CCWWGG 2 cut(s) 2445, 3523
TaaI ACNGT 7 cut(s) 64, 217, 286, 2629, 2741, 3494, 3568
TaiI ACGT 9 cut(s) 37, 153, 382, 417, 447, 549, 1708, 2082, 2920
TatI WGTACW 8 cut(s) 64, 217, 1677, 1796, 2479, 2624, 3230, 3568
TscAI CASTG 8 cut(s) 278, 562, 918, 1261, 1366, 1516, 3054, 3115
TseFI GTSAC 1 cut(s) 1080
TseI GCWGC 2 cut(s) 888, 1152
Tsp45I GTSAC 1 cut(s) 1080
TspGWI ACGGA 3 cut(s) 123, 1147, 2150
TspRI CASTG 8 cut(s) 278, 562, 918, 1261, 1366, 1516, 3054, 3115
Tth111I GACNNNGTC 3 cut(s) 1868, 2948, 3095
Van91I CCANNNNNTGG 1 cut(s) 757
VneI GTGCAC 1 cut(s) 1357
VpaK11BI GGWCC 5 cut(s) 1712, 2442, 2552, 2912, 3091
VspI ATTAAT 1 cut(s) 3165
XapI RAATTY 5 cut(s) 102, 916, 1318, 1399, 1952
XceI RCATGY 6 cut(s) 353, 517, 1310, 2242, 2625, 2678
XcmI CCANNNNNNNNNTGG 1 cut(s) 3107
XhoI CTCGAG 3 cut(s) 716, 794, 3237
XmaJI CCTAGG 1 cut(s) 3523
XmiI GTMKAC 2 cut(s) 2502, 3535
XmnI GAANNNNTTC 3 cut(s) 504, 945, 2104
XspI CTAG 7 cut(s) 486, 653, 1092, 1940, 2756, 3078, 3524
ZrmI AGTACT 3 cut(s) 219, 2481, 3232
Zsp2I ATGCAT 3 cut(s) 315, 1974, 2527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.