pycom02g05200

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
3437666 .. 3446446
8781 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g05200.4

Sequence Viewer

Length: 3267 bp
ATGCAGCATTGGAAAAAAAGGGCTACAAGAAAACCCGAACTGTTGCGGGCCATCGAAGAGTCGAGGATCTCGATCATTGTCTTCTCAAAGAGGTATGCGGATTCGAGTTGGTGCCTCGACGAGCTAGTGAAGATCATGGAGTGCAGATCCAAACTGGGGCAACATGTTTTGCCAATATTCTATCATGTTGAAACTTCAGACATCAGGAAGCAAGAAGGTAGCATAGCCCCAATGTTTCAGAAGCACGAAGAGGACATCAGTAAAGAAGAAGATGACAACAAACGGGAAGCTAAGAGAAAAAGGGTAGAGCAATGGAGAGAGGCTCTTACTAAAGCTGCAGACTTGTCTGGTCACGATCTTAAAAACACTGAGAACGGGCATGAAGCAAAGCTTATTCAGAAAATTATTTATGAGAATATTTGGAAATGGCTCCCCAGCACAAACAAATTACATGTGGCCAAGTACCCAATTGGAATCAATTCTCGTGTTGGAGATATTATTACTTATCTCTCGAGTGGTGAATCGAAAGATGTGGTCATGGTTGGAATTTGGGGGATGGGTGGATTGGGTAAAACAACAGCTGCCAAAGCCATTTATAACCAAATTCATCCTAAGTTTGAATCGAAGAGTTTCCTTGCCGATGTTAGCGACACTACAAGTAAACATGGCCTGGTTCATTTGCAAAAAAAACTTATTTGTGACATCTTGGATCAAGAGTCTAAAATAAGCACTGTTGATGAAGGTATCTGTCAGATAGAAGAGCAATTTTCAGATAAAAGGGTACTTGTCATCATGGACAACATAGATGAAGTGGAACAACTCAATGCAATAGCTGGAAATCACAAGTGGTTTGGTCCAGGAAGTAGAATTATCATAACGACACGAAATGTACGTCTACTAATAAATGTGGACAAAGTATATCCGGCTCAAAAATTGAATGAAGGAGAAGCTGTGGAGCTCTTTAGTTGGCATGCATTTGGAAATAGTTGGCCTAATGAAGGATATCTTCAACTCTCAGAAAAAGTTGTTTCTTACTGTGATGGTTTGCCACTAGCCCTTGAAGTTTTAGGTTCTTCTTTGTTTAAAAGAACCATAGCCTGGTGGGAATGTCAATTGAAGAAATTGGAAAGAATTCCTAATGGAAAAATAATAAAACCACTAAGAATGAGCTTTGACGGGCTAGATGATACGGAGAAGGCTACATTCCTTAACATAGCTTGTTTCTTTATTGGACAGGACACGGACCGTGTTGCAAAATTATTAGATGCATGTGGATTTTTTGCAACAGTAGGAATTGGTGTTCTCTGTGAACGATGCCTTATAACTGTTGAAGACAACACGTTGAGTATGCATGATTTGCTTCAAGAAATGGCCAAAGTAATCATTTCTGAGAAATCTCCTGATCACCCTGGAAAATGGAGCAGGTTATGGAATTGTGAAGATGTCATCGATGTATTGACATATAAATCTGGAACTGAAGAAGTTGAAGGACTTGCTCTATGTTTGCCTTATGGTAATGACAATGCTAGTTTCAGTACAGAAGCATTTGCCAATATGAAGAACCTGAGATTGCTCCAGCTCTACGACGTAGAGCTTAATGGAGAATACAAACATTTTCCCAAAGAGTTACTATGGCTGTGCTGGGAAGAGTGCCCTTTAGAGTCCATACCAGATGACTTTTTTAATCAAGATAAACTAGTTGTTTTAGAGATGCGGAGGAGCAAACTGGTACAAGTTTGGGAGGTTCAATTTTCCTTTGATTTTCTACAACAGTCGCTACATAACTTGAAAACCCTCGATCTTAGCAATTCCCATTCCTTAGAGAAATCACCGGACTTTTCACAAGTCCCAAATCTTGAAGAGTTGATATTGGAAAGCTGTTGGAGGTTGACCGAGATTCACCCCTCCGTTGGTCATCTTAAAAGACTTTCTTTGGTGAACCTTACACATTGCCATGAGCTTATTTCTCTTCCAAGGGATTTCTATAAGTCAAAATCTGTTGAGACTCTTCTTCTTCATGGGTGTTGGAAATTCAGAGAAGTGCATGAGGATATAGGGGAGATGATATCACTGAGAACACTTGAAGCAAAGCATACAGCCATAAGAGAAGTACCACATTCCATAGTAAGATTGAAGAATCTCACTCGTTTATCCCTTGACAGGTACTGCATCAGCGTAGAGCTCAAAGGAGAATACAAATATCTGTGTTGGGAACGATGCCCTTTAAAGTCCATACCAGATGACTTTTTTAATCAAGATAAACTAGTTGTTTTAGAGATGCAGTGTAGCAGTCTGGTACAAGTTTGGGAGGGTTCCAAGACGCTTTATAACTTGAAAACCCTTGATCTCAGCCAGTCCCTTTCCTTACAGAAATCACCAGACTTTTCACAAATCCCAAATCTTGAAAAGTTGATATTGGAATGGTGTGAGAGTTTGTCCGAGATTCACCCCTCCATTGGTCATCTTAAAAGACTTTCTTTGGTGAACCTTTCAGAATGCTATAAGCTTATTTCTCTTCCAAGGGATTTCTATAAGTCAAAATCTGTTGAGACTCTTCTTCTTCATGGGTGTTGGAAATTCAGAAAAGTGCATGAGGATATAGGGGAGATGATATCACTGAGAACACTTGAAGCAGAGTATACAGCCATAAGAGAAGTACCACCTTCCATGGTAGGATTGAAGAATCTCACTCGTTTATCCCTTAACCACATCAGTTTAAAGCATACAGCCAAAGAGTTAATACAGTTGCGTTGGAAAAGATGCCATTTAAAGTCCATACCAGATGACTTTTTTAATCAAGATAAACTAGTTGTTTTAGAGATGCGGAGGAGCAAACTGGTACAAGTTTGGGAGGGTTCCAAGTCCCTACATAACTTGAAAACCCTTGATCTCAGCTATTCCTCTTCCTTACGAAAATCACCGGACTTTTCACAAGTCCCAAATCTTGAAGGGTTGATATTGGATGGCTGTTTGAATTTGTCCGAGATTCACCCCTCCATTGGTCATCTTAAAAGACTTTCTTTGGTGAACCTTGAGTGGTGTGATAAGCTTATTTCTCTACCAAGGGATTTCTATAAATTGAAATCTGTTGAGACTCTTATTCTTAATGACTGTTCAAAATTCATAGAACTGCATGAGGATATAGGGGAGATGATATCACTGAGAACACTTGAAGCAGAGGATACATCAATAAGAGAAGTACCACCTTCCATAGTAAGATTGAAGAATCTCACTCGTTTATCCCTATCAGGTGTGGAAAGGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1089

Amino Acids

125.18

Weight (kDa)

6.3

Isoelectric Point (pI)

41.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 597, 1322, 2328
Acc36I ACCTGC 1 cut(s) 1413
AccB1I GGYRCC 1 cut(s) 111
AccB7I CCANNNNNTGG 1 cut(s) 1098
AccI GTMKAC 2 cut(s) 895, 2639
AciI CCGC 4 cut(s) 46, 98, 1714, 2824
AclWI GGATC 3 cut(s) 74, 141, 717
AcoI YGGCCR 2 cut(s) 456, 1371
AcsI RAATTY 7 cut(s) 546, 603, 1131, 2030, 2576, 2974, 3119
AcuI CTGAAG 2 cut(s) 180, 1497
AfiI CCNNNNNNNGG 7 cut(s) 156, 998, 1098, 1910, 2160, 2456, 2999
AflIII ACRYGT 3 cut(s) 163, 451, 1338
AhlI ACTAGT 3 cut(s) 1696, 2263, 2806
AjnI CCWGG 4 cut(s) 669, 856, 1097, 1408
AloI GAACNNNNNNTCC 2 cut(s) 1284, 1316
Alw21I GWGCWC 2 cut(s) 960, 2184
Alw26I GTCTC 3 cut(s) 1997, 2543, 3086
AlwI GGATC 3 cut(s) 74, 141, 717
AlwNI CAGNNNCTG 1 cut(s) 2166
Ama87I CYCGRG 1 cut(s) 511
AoxI GGCC 5 cut(s) 48, 456, 667, 989, 1371
ApeKI GCWGC 3 cut(s) 4, 335, 581
ApoI RAATTY 7 cut(s) 546, 603, 1131, 2030, 2576, 2974, 3119
ArsI GACNNNNNNTTYG 2 cut(s) 877, 909
Asp700I GAANNNNTTC 3 cut(s) 478, 629, 1131
AspS9I GGNCC 3 cut(s) 48, 854, 1243
AvaI CYCGRG 1 cut(s) 511
AvaII GGWCC 2 cut(s) 854, 1243
BaeGI GKGCMC 1 cut(s) 1655
BalI TGGCCA 2 cut(s) 458, 1373
BanI GGYRCC 1 cut(s) 111
BanII GRGCYC 2 cut(s) 960, 2184
BauI CACGAG 1 cut(s) 483
BbsI GAAGAC 2 cut(s) 73, 1338
Bbv12I GWGCWC 2 cut(s) 960, 2184
BbvI GCAGC 3 cut(s) 16, 322, 568
BccI CCATC 4 cut(s) 59, 550, 1034, 2957
BciT130I CCWGG 4 cut(s) 671, 858, 1099, 1410
BciVI GTATCC 1 cut(s) 3175
BclI TGATCA 1 cut(s) 1402
BcoDI GTCTC 3 cut(s) 1997, 2543, 3086
BcuI ACTAGT 3 cut(s) 1696, 2263, 2806
BfaI CTAG 7 cut(s) 125, 1052, 1181, 1527, 1697, 2264, 2807
BfmI CTRYAG 1 cut(s) 336
BfuAI ACCTGC 1 cut(s) 1413
BfuI GTATCC 1 cut(s) 3175
BisI GCNGC 3 cut(s) 5, 336, 582
BlsI GCNGC 3 cut(s) 6, 337, 583
Bme1390I CCNGG 4 cut(s) 671, 858, 1099, 1410
Bme18I GGWCC 2 cut(s) 854, 1243
BmeT110I CYCGRG 1 cut(s) 511
BmgT120I GGNCC 3 cut(s) 48, 854, 1243
BmiI GGNNCC 4 cut(s) 113, 431, 2314, 2857
BmrFI CCNGG 4 cut(s) 671, 858, 1099, 1410
BmrI ACTGGG 1 cut(s) 164
BmsI GCATC 8 cut(s) 1255, 1304, 1701, 2178, 2207, 2268, 2750, 2811
BmuI ACTGGG 1 cut(s) 164
BpiI GAAGAC 2 cut(s) 73, 1338
BplI GAGNNNNNCTC 2 cut(s) 307, 339
BpmI CTGGAG 1 cut(s) 1559
BpuEI CTTGAG 1 cut(s) 3053
Bsa29I ATCGAT 1 cut(s) 1449
BsaBI GATNNNNATC 1 cut(s) 71
BsaJI CCNNGG 5 cut(s) 1408, 1973, 2519, 2667, 3062
BsaWI WCCGGW 2 cut(s) 1831, 2920
BsaXI ACNNNNNCTCC 2 cut(s) 936, 966
Bsc4I CCNNNNNNNGG 7 cut(s) 156, 998, 1098, 1910, 2160, 2456, 2999
Bse1I ACTGG 4 cut(s) 159, 1731, 2353, 2841
Bse3DI GCAATG 2 cut(s) 317, 1948
Bse8I GATNNNNATC 1 cut(s) 71
BseBI CCWGG 4 cut(s) 671, 858, 1099, 1410
BseCI ATCGAT 1 cut(s) 1449
BseDI CCNNGG 5 cut(s) 1408, 1973, 2519, 2667, 3062
BseGI GGATG 3 cut(s) 561, 607, 2968
BseJI GATNNNNATC 1 cut(s) 71
BseLI CCNNNNNNNGG 7 cut(s) 156, 998, 1098, 1910, 2160, 2456, 2999
BseMI GCAATG 2 cut(s) 317, 1948
BseMII CTCAG 9 cut(s) 360, 1029, 1380, 1556, 2063, 2362, 2609, 2905, 3152
BseNI ACTGG 4 cut(s) 159, 1731, 2353, 2841
BseRI GAGGAG 2 cut(s) 1732, 2842
BseSI GKGCMC 1 cut(s) 1655
BseXI GCAGC 3 cut(s) 16, 322, 568
BseYI CCCAGC 2 cut(s) 434, 1641
BsgI GTGCAG 1 cut(s) 163
BshFI GGCC 5 cut(s) 50, 458, 669, 991, 1373
BshNI GGYRCC 1 cut(s) 111
BshVI ATCGAT 1 cut(s) 1449
BsiHKAI GWGCWC 2 cut(s) 960, 2184
BsiHKCI CYCGRG 1 cut(s) 511
BsiSI CCGG 3 cut(s) 923, 1832, 2921
BslFI GGGAC 4 cut(s) 1832, 2341, 2848, 2921
BslI CCNNNNNNNGG 7 cut(s) 156, 998, 1098, 1910, 2160, 2456, 2999
BsmAI GTCTC 3 cut(s) 1997, 2543, 3086
BsmFI GGGAC 4 cut(s) 1832, 2341, 2848, 2921
BsmI GAATGC 1 cut(s) 2501
BsnI GGCC 5 cut(s) 50, 458, 669, 991, 1373
BsoBI CYCGRG 1 cut(s) 511
Bsp1286I GDGCHC 3 cut(s) 960, 1655, 2184
Bsp19I CCATGG 1 cut(s) 2667
BspACI CCGC 4 cut(s) 46, 98, 1714, 2824
BspANI GGCC 5 cut(s) 50, 458, 669, 991, 1373
BspCNI CTCAG 9 cut(s) 361, 1028, 1381, 1557, 2064, 2361, 2610, 2904, 3153
BspDI ATCGAT 1 cut(s) 1449
BspLI GGNNCC 4 cut(s) 113, 431, 2314, 2857
BspMAI CTGCAG 1 cut(s) 340
BspMI ACCTGC 1 cut(s) 1413
BspPI GGATC 3 cut(s) 74, 141, 717
BspQI GCTCTTC 1 cut(s) 753
BspT107I GGYRCC 1 cut(s) 111
BsrDI GCAATG 2 cut(s) 317, 1948
BsrI ACTGG 4 cut(s) 159, 1731, 2353, 2841
BssECI CCNNGG 5 cut(s) 1408, 1973, 2519, 2667, 3062
BssNAI GTATAC 1 cut(s) 2640
BssSI CACGAG 1 cut(s) 483
BssT1I CCWWGG 4 cut(s) 1973, 2519, 2667, 3062
Bst1107I GTATAC 1 cut(s) 2640
Bst2BI CACGAG 1 cut(s) 483
Bst2UI CCWGG 4 cut(s) 671, 858, 1099, 1410
Bst4CI ACNGT 9 cut(s) 42, 733, 1037, 1247, 1288, 1327, 1773, 2745, 3113
BstAPI GCANNNNNTGC 1 cut(s) 1357
BstC8I GCNNGC 2 cut(s) 48, 972
BstDSI CCRYGG 1 cut(s) 2667
BstENI CCTNNNNNAGG 1 cut(s) 996
BstF5I GGATG 3 cut(s) 561, 607, 2968
BstMAI GTCTC 3 cut(s) 1997, 2543, 3086
BstMWI GCNNNNNNNGC 2 cut(s) 587, 1357
BstNI CCWGG 4 cut(s) 671, 858, 1099, 1410
BstNSI RCATGY 4 cut(s) 167, 455, 974, 1272
BstSCI CCNGG 4 cut(s) 669, 856, 1097, 1408
BstSFI CTRYAG 1 cut(s) 336
BstSLI GKGCMC 1 cut(s) 1655
BstV1I GCAGC 3 cut(s) 16, 322, 568
BstV2I GAAGAC 2 cut(s) 73, 1338
BstX2I RGATCY 2 cut(s) 66, 146
BstYI RGATCY 2 cut(s) 66, 146
BstZ17I GTATAC 1 cut(s) 2640
Bsu15I ATCGAT 1 cut(s) 1449
BsuI GTATCC 1 cut(s) 3175
BsuRI GGCC 5 cut(s) 50, 458, 669, 991, 1373
BsuTUI ATCGAT 1 cut(s) 1449
BtgI CCRYGG 1 cut(s) 2667
BtsCI GGATG 3 cut(s) 561, 607, 2968
BtsI GCAGTG 1 cut(s) 2288
BtsIMutI CAGTG 6 cut(s) 366, 729, 2069, 2288, 2615, 3158
BveI ACCTGC 1 cut(s) 1413
Cac8I GCNNGC 2 cut(s) 48, 972
CaiI CAGNNNCTG 1 cut(s) 2166
Cfr13I GGNCC 3 cut(s) 48, 854, 1243
ClaI ATCGAT 1 cut(s) 1449
CpoI CGGWCCG 1 cut(s) 1243
CseI GACGC 1 cut(s) 2329
CspI CGGWCCG 1 cut(s) 1243
DraI TTTAAA 4 cut(s) 1084, 2226, 2718, 2769
EaeI YGGCCR 2 cut(s) 456, 1371
Ecl136II GAGCTC 2 cut(s) 958, 2182
Eco130I CCWWGG 4 cut(s) 1973, 2519, 2667, 3062
Eco24I GRGCYC 2 cut(s) 960, 2184
Eco32I GATATC 4 cut(s) 1004, 2067, 2613, 3156
Eco47I GGWCC 2 cut(s) 854, 1243
Eco53kI GAGCTC 2 cut(s) 958, 2182
Eco57I CTGAAG 2 cut(s) 180, 1497
Eco88I CYCGRG 1 cut(s) 511
EcoICRI GAGCTC 2 cut(s) 958, 2182
EcoNI CCTNNNNNAGG 1 cut(s) 996
EcoRI GAATTC 1 cut(s) 1131
EcoRII CCWGG 4 cut(s) 669, 856, 1097, 1408
EcoRV GATATC 4 cut(s) 1004, 2067, 2613, 3156
EcoT14I CCWWGG 4 cut(s) 1973, 2519, 2667, 3062
EcoT22I ATGCAT 3 cut(s) 976, 1270, 1353
EcoT38I GRGCYC 2 cut(s) 960, 2184
ErhI CCWWGG 4 cut(s) 1973, 2519, 2667, 3062
FaqI GGGAC 4 cut(s) 1832, 2341, 2848, 2921
FauI CCCGC 1 cut(s) 39
FbaI TGATCA 1 cut(s) 1402
FblI GTMKAC 2 cut(s) 895, 2639
Fnu4HI GCNGC 3 cut(s) 5, 336, 582
FokI GGATG 3 cut(s) 568, 594, 2975
FriOI GRGCYC 2 cut(s) 960, 2184
Fsp4HI GCNGC 3 cut(s) 5, 336, 582
FspBI CTAG 7 cut(s) 125, 1052, 1181, 1527, 1697, 2264, 2807
GluI GCNGC 3 cut(s) 5, 336, 582
GsaI CCCAGC 2 cut(s) 438, 1645
GsuI CTGGAG 1 cut(s) 1559
HaeIII GGCC 5 cut(s) 50, 458, 669, 991, 1373
HapII CCGG 3 cut(s) 923, 1832, 2921
HgaI GACGC 1 cut(s) 2329
HincII GTYRAC 1 cut(s) 1890
HindII GTYRAC 1 cut(s) 1890
HindIII AAGCTT 3 cut(s) 389, 2504, 3047
HpaII CCGG 3 cut(s) 923, 1832, 2921
Hpy166II GTNNAC 9 cut(s) 662, 896, 910, 1310, 1890, 1939, 2485, 2640, 3028
Hpy8I GTNNAC 9 cut(s) 662, 896, 910, 1310, 1890, 1939, 2485, 2640, 3028
Hpy99I CGWCG 2 cut(s) 122, 1589
HpyAV CCTTC 9 cut(s) 209, 734, 935, 992, 1189, 1481, 2673, 2942, 3216
HpyCH4III ACNGT 9 cut(s) 42, 733, 1037, 1247, 1288, 1327, 1773, 2745, 3113
HpyCH4IV ACGT 3 cut(s) 892, 1340, 1587
HpyF10VI GCNNNNNNNGC 2 cut(s) 587, 1357
HpySE526I ACGT 3 cut(s) 892, 1340, 1587
Ksp22I TGATCA 1 cut(s) 1402
LguI GCTCTTC 1 cut(s) 753
LmnI GCTCC 6 cut(s) 435, 955, 1419, 1578, 1719, 2829
Lsp1109I GCAGC 3 cut(s) 16, 322, 568
LweI GCATC 8 cut(s) 1255, 1304, 1701, 2178, 2207, 2268, 2750, 2811
MaeI CTAG 7 cut(s) 125, 1052, 1181, 1527, 1697, 2264, 2807
MaeII ACGT 3 cut(s) 892, 1340, 1587
MaeIII GTNAC 3 cut(s) 350, 698, 1626
MfeI CAATTG 2 cut(s) 468, 1112
MflI RGATCY 2 cut(s) 66, 146
MhlI GDGCHC 3 cut(s) 960, 1655, 2184
MlsI TGGCCA 2 cut(s) 458, 1373
MluNI TGGCCA 2 cut(s) 458, 1373
MlyI GAGTC 6 cut(s) 68, 725, 1670, 1999, 2545, 3088
MmeI TCCRAC 6 cut(s) 469, 523, 1862, 2006, 2552, 2732
Mox20I TGGCCA 2 cut(s) 458, 1373
Mph1103I ATGCAT 3 cut(s) 976, 1270, 1353
MroXI GAANNNNTTC 3 cut(s) 478, 629, 1131
MscI TGGCCA 2 cut(s) 458, 1373
MslI CAYNNNNRTG 1 cut(s) 1953
Msp20I TGGCCA 2 cut(s) 458, 1373
MspA1I CMGCKG 1 cut(s) 581
MspI CCGG 3 cut(s) 923, 1832, 2921
MspR9I CCNGG 4 cut(s) 671, 858, 1099, 1410
MunI CAATTG 2 cut(s) 468, 1112
Mva1269I GAATGC 1 cut(s) 2501
MvaI CCWGG 4 cut(s) 671, 858, 1099, 1410
MwoI GCNNNNNNNGC 2 cut(s) 587, 1357
NcoI CCATGG 1 cut(s) 2667
NlaIV GGNNCC 4 cut(s) 113, 431, 2314, 2857
NmuCI GTSAC 2 cut(s) 350, 698
NsiI ATGCAT 3 cut(s) 976, 1270, 1353
NspI RCATGY 4 cut(s) 167, 455, 974, 1272
PaeI GCATGC 1 cut(s) 974
PaeR7I CTCGAG 1 cut(s) 511
PciI ACATGT 2 cut(s) 163, 451
PciSI GCTCTTC 1 cut(s) 753
PcsI WCGNNNNNNNCGW 2 cut(s) 68, 889
PctI GAATGC 1 cut(s) 2501
PdmI GAANNNNTTC 3 cut(s) 478, 629, 1131
PflMI CCANNNNNTGG 1 cut(s) 1098
PfoI TCCNGGA 1 cut(s) 856
PkrI GCNGC 3 cut(s) 6, 337, 583
PleI GAGTC 6 cut(s) 67, 724, 1669, 1999, 2545, 3088
PpsI GAGTC 6 cut(s) 67, 724, 1669, 1999, 2545, 3088
PscI ACATGT 2 cut(s) 163, 451
PsiI TTATAA 3 cut(s) 597, 1322, 2328
Psp124BI GAGCTC 2 cut(s) 960, 2184
Psp6I CCWGG 4 cut(s) 669, 856, 1097, 1408
PspFI CCCAGC 2 cut(s) 434, 1641
PspGI CCWGG 4 cut(s) 669, 856, 1097, 1408
PspN4I GGNNCC 4 cut(s) 113, 431, 2314, 2857
PspPI GGNCC 3 cut(s) 48, 854, 1243
PstI CTGCAG 1 cut(s) 340
PstNI CAGNNNCTG 1 cut(s) 2166
PsuI RGATCY 2 cut(s) 66, 146
PvuII CAGCTG 1 cut(s) 581
RseI CAYNNNNRTG 1 cut(s) 1953
Rsr2I CGGWCCG 1 cut(s) 1243
RsrII CGGWCCG 1 cut(s) 1243
SacI GAGCTC 2 cut(s) 960, 2184
SapI GCTCTTC 1 cut(s) 753
SatI GCNGC 3 cut(s) 5, 336, 582
Sau96I GGNCC 3 cut(s) 48, 854, 1243
SchI GAGTC 6 cut(s) 68, 725, 1670, 1999, 2545, 3088
ScrFI CCNGG 4 cut(s) 671, 858, 1099, 1410
SduI GDGCHC 3 cut(s) 960, 1655, 2184
SfaNI GCATC 8 cut(s) 1255, 1304, 1701, 2178, 2207, 2268, 2750, 2811
SfcI CTRYAG 1 cut(s) 336
Sfr274I CTCGAG 1 cut(s) 511
SinI GGWCC 2 cut(s) 854, 1243
SlaI CTCGAG 1 cut(s) 511
SmiMI CAYNNNNRTG 1 cut(s) 1953
SmlI CTYRAG 2 cut(s) 511, 3032
SmoI CTYRAG 2 cut(s) 511, 3032
SpeI ACTAGT 3 cut(s) 1696, 2263, 2806
SphI GCATGC 1 cut(s) 974
SsiI CCGC 4 cut(s) 46, 98, 1714, 2824
SspI AATATT 2 cut(s) 177, 418
SspMI CTAG 7 cut(s) 125, 1052, 1181, 1527, 1697, 2264, 2807
SstI GAGCTC 2 cut(s) 960, 2184
StyD4I CCNGG 4 cut(s) 669, 856, 1097, 1408
StyI CCWWGG 4 cut(s) 1973, 2519, 2667, 3062
TaaI ACNGT 9 cut(s) 42, 733, 1037, 1247, 1288, 1327, 1773, 2745, 3113
TaiI ACGT 3 cut(s) 895, 1343, 1590
TaqII GACCGA 1 cut(s) 1907
TatI WGTACW 1 cut(s) 1535
TscAI CASTG 6 cut(s) 373, 736, 2076, 2288, 2622, 3165
TseFI GTSAC 2 cut(s) 350, 698
TseI GCWGC 3 cut(s) 4, 335, 581
Tsp45I GTSAC 2 cut(s) 350, 698
TspGWI ACGGA 3 cut(s) 1205, 1256, 1897
TspRI CASTG 6 cut(s) 373, 736, 2076, 2288, 2622, 3165
Van91I CCANNNNNTGG 1 cut(s) 1098
VpaK11BI GGWCC 2 cut(s) 854, 1243
XagI CCTNNNNNAGG 1 cut(s) 996
XapI RAATTY 7 cut(s) 546, 603, 1131, 2030, 2576, 2974, 3119
XceI RCATGY 4 cut(s) 167, 455, 974, 1272
XhoI CTCGAG 1 cut(s) 511
XmiI GTMKAC 2 cut(s) 895, 2639
XmnI GAANNNNTTC 3 cut(s) 478, 629, 1131
XspI CTAG 7 cut(s) 125, 1052, 1181, 1527, 1697, 2264, 2807
Zsp2I ATGCAT 3 cut(s) 976, 1270, 1353
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.