TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 2 - 119 | 4.7e-21 | TIR domain |
| NB-ARC | PF00931 | 132 - 298 | 2.4e-17 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 367 - 436 | 9.8e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 676 - 775 | 3.3e-07 | Leucine-rich repeat region |
| LRR_4 | PF12799 | 704 - 745 | 3.7e-07 | Leucine Rich repeats (2 copies) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 4 cut(s) | 507, 1232, 1668, 2639 |
| AccB1I | GGYRCC | 1 cut(s) | 1428 |
| AccI | GTMKAC | 1 cut(s) | 805 |
| AccII | CGCG | 1 cut(s) | 558 |
| AciI | CCGC | 4 cut(s) | 8, 1182, 1356, 2463 |
| AclWI | GGATC | 5 cut(s) | 95, 439, 988, 1415, 2133 |
| AcoI | YGGCCR | 3 cut(s) | 259, 366, 1281 |
| AcsI | RAATTY | 9 cut(s) | 250, 456, 513, 530, 1411, 1928, 2239, 2246, 2491 |
| AcuI | CTGAAG | 2 cut(s) | 159, 1407 |
| AfaI | GTAC | 4 cut(s) | 1456, 1650, 2218, 2569 |
| AfeI | AGCGCT | 1 cut(s) | 966 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 908, 1027, 1351, 1808, 2275, 2561 |
| AflII | CTTAAG | 1 cut(s) | 2674 |
| AflIII | ACRYGT | 3 cut(s) | 73, 109, 361 |
| AhlI | ACTAGT | 1 cut(s) | 1615 |
| AjnI | CCWGG | 4 cut(s) | 766, 1318, 1644, 2356 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 739, 771 |
| Alw26I | GTCTC | 1 cut(s) | 1895 |
| AlwI | GGATC | 5 cut(s) | 95, 439, 988, 1415, 2133 |
| Aor51HI | AGCGCT | 1 cut(s) | 966 |
| AoxI | GGCC | 5 cut(s) | 259, 366, 658, 1281, 1353 |
| ApeKI | GCWGC | 5 cut(s) | 245, 491, 1270, 1641, 2679 |
| ApoI | RAATTY | 9 cut(s) | 250, 456, 513, 530, 1411, 1928, 2239, 2246, 2491 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 388 |
| AspLEI | GCGC | 1 cut(s) | 967 |
| AspS9I | GGNCC | 2 cut(s) | 764, 2860 |
| AsuHPI | GGTGA | 7 cut(s) | 49, 334, 1307, 1719, 1790, 1846, 2630 |
| AvaII | GGWCC | 2 cut(s) | 764, 2860 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 637, 670 |
| BalI | TGGCCA | 3 cut(s) | 261, 368, 1283 |
| BanI | GGYRCC | 1 cut(s) | 1428 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1749, 1781 |
| BauI | CACGAG | 1 cut(s) | 792 |
| BbvI | GCAGC | 5 cut(s) | 232, 478, 1257, 1653, 2691 |
| BceAI | ACGGC | 1 cut(s) | 2253 |
| BciT130I | CCWGG | 4 cut(s) | 768, 1320, 1646, 2358 |
| BciVI | GTATCC | 1 cut(s) | 2686 |
| BclI | TGATCA | 2 cut(s) | 904, 1312 |
| BcoDI | GTCTC | 1 cut(s) | 1895 |
| BcuI | ACTAGT | 1 cut(s) | 1615 |
| BfaI | CTAG | 7 cut(s) | 962, 1446, 1616, 1676, 2700, 2819, 2868 |
| BfmI | CTRYAG | 1 cut(s) | 2444 |
| BfoI | RGCGCY | 1 cut(s) | 968 |
| BfrI | CTTAAG | 1 cut(s) | 2674 |
| BfuI | GTATCC | 1 cut(s) | 2686 |
| BisI | GCNGC | 6 cut(s) | 246, 492, 1271, 1356, 1642, 2680 |
| BlsI | GCNGC | 6 cut(s) | 247, 493, 1272, 1357, 1643, 2681 |
| Bme1390I | CCNGG | 4 cut(s) | 768, 1320, 1646, 2358 |
| Bme18I | GGWCC | 2 cut(s) | 764, 2860 |
| BmgT120I | GGNCC | 2 cut(s) | 764, 2860 |
| BmiI | GGNNCC | 2 cut(s) | 1343, 1430 |
| BmrFI | CCNGG | 4 cut(s) | 768, 1320, 1646, 2358 |
| BmrI | ACTGGG | 1 cut(s) | 74 |
| BmsI | GCATC | 4 cut(s) | 724, 1169, 1559, 2068 |
| BmuI | ACTGGG | 1 cut(s) | 74 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 217, 249, 219, 251 |
| BpuEI | CTTGAG | 2 cut(s) | 884, 1387 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2943 |
| BsaJI | CCNNGG | 3 cut(s) | 1318, 1424, 1871 |
| BsaWI | WCCGGW | 1 cut(s) | 1729 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 908, 1027, 1351, 1808, 2275, 2561 |
| Bse1I | ACTGG | 3 cut(s) | 69, 735, 1773 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2943 |
| BseBI | CCWGG | 4 cut(s) | 768, 1320, 1646, 2358 |
| BseDI | CCNNGG | 3 cut(s) | 1318, 1424, 1871 |
| BseGI | GGATG | 8 cut(s) | 165, 471, 517, 739, 1184, 2439, 2456, 2887 |
| BseJI | GATNNNNATC | 1 cut(s) | 2943 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 908, 1027, 1351, 1808, 2275, 2561 |
| BseMII | CTCAG | 9 cut(s) | 1084, 1475, 1513, 1714, 1782, 2176, 2340, 2916, 2962 |
| BseNI | ACTGG | 3 cut(s) | 69, 735, 1773 |
| BseRI | GAGGAG | 1 cut(s) | 2921 |
| BseXI | GCAGC | 5 cut(s) | 232, 478, 1257, 1653, 2691 |
| BseYI | CCCAGC | 1 cut(s) | 2156 |
| BsgI | GTGCAG | 1 cut(s) | 73 |
| Bsh1236I | CGCG | 1 cut(s) | 558 |
| BshFI | GGCC | 5 cut(s) | 261, 368, 660, 1283, 1355 |
| BshNI | GGYRCC | 1 cut(s) | 1428 |
| BsiSI | CCGG | 1 cut(s) | 1730 |
| BslFI | GGGAC | 1 cut(s) | 1730 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 908, 1027, 1351, 1808, 2275, 2561 |
| BsmAI | GTCTC | 1 cut(s) | 1895 |
| BsmFI | GGGAC | 1 cut(s) | 1730 |
| BsmI | GAATGC | 1 cut(s) | 396 |
| BsnI | GGCC | 5 cut(s) | 261, 368, 660, 1283, 1355 |
| Bsp68I | TCGCGA | 1 cut(s) | 558 |
| BspACI | CCGC | 4 cut(s) | 8, 1182, 1356, 2463 |
| BspANI | GGCC | 5 cut(s) | 261, 368, 660, 1283, 1355 |
| BspCNI | CTCAG | 9 cut(s) | 1083, 1476, 1512, 1713, 1783, 2175, 2341, 2917, 2961 |
| BspFNI | CGCG | 1 cut(s) | 558 |
| BspHI | TCATGA | 3 cut(s) | 751, 2089, 2382 |
| BspLI | GGNNCC | 2 cut(s) | 1343, 1430 |
| BspPI | GGATC | 5 cut(s) | 95, 439, 988, 1415, 2133 |
| BspT107I | GGYRCC | 1 cut(s) | 1428 |
| BspTI | CTTAAG | 1 cut(s) | 2674 |
| BsrI | ACTGG | 3 cut(s) | 69, 735, 1773 |
| BssECI | CCNNGG | 3 cut(s) | 1318, 1424, 1871 |
| BssSI | CACGAG | 1 cut(s) | 792 |
| BssT1I | CCWWGG | 2 cut(s) | 1424, 1871 |
| Bst2BI | CACGAG | 1 cut(s) | 792 |
| Bst2UI | CCWGG | 4 cut(s) | 768, 1320, 1646, 2358 |
| Bst4CI | ACNGT | 6 cut(s) | 947, 1237, 1922, 2023, 2536, 2635 |
| Bst6I | CTCTTC | 3 cut(s) | 1752, 1872, 1911 |
| BstAFI | CTTAAG | 1 cut(s) | 2674 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1267, 2078 |
| BstC8I | GCNNGC | 3 cut(s) | 882, 1849, 2667 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 906 |
| BstF5I | GGATG | 8 cut(s) | 165, 471, 517, 739, 1184, 2439, 2456, 2887 |
| BstFNI | CGCG | 1 cut(s) | 558 |
| BstH2I | RGCGCY | 1 cut(s) | 968 |
| BstHHI | GCGC | 1 cut(s) | 967 |
| BstMAI | GTCTC | 1 cut(s) | 1895 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 40, 497, 1267, 2078, 2755 |
| BstNI | CCWGG | 4 cut(s) | 768, 1320, 1646, 2358 |
| BstNSI | RCATGY | 4 cut(s) | 77, 113, 365, 884 |
| BstSCI | CCNGG | 4 cut(s) | 766, 1318, 1644, 2356 |
| BstSFI | CTRYAG | 1 cut(s) | 2444 |
| BstUI | CGCG | 1 cut(s) | 558 |
| BstV1I | GCAGC | 5 cut(s) | 232, 478, 1257, 1653, 2691 |
| BstX2I | RGATCY | 2 cut(s) | 980, 2125 |
| BstYI | RGATCY | 2 cut(s) | 980, 2125 |
| BsuI | GTATCC | 1 cut(s) | 2686 |
| BsuRI | GGCC | 5 cut(s) | 261, 368, 660, 1283, 1355 |
| BtgZI | GCGATG | 1 cut(s) | 573 |
| BtsCI | GGATG | 8 cut(s) | 165, 471, 517, 739, 1184, 2439, 2456, 2887 |
| BtsI | GCAGTG | 1 cut(s) | 1640 |
| BtsIMutI | CAGTG | 4 cut(s) | 1213, 1640, 2170, 2346 |
| BtuMI | TCGCGA | 1 cut(s) | 558 |
| Cac8I | GCNNGC | 3 cut(s) | 882, 1849, 2667 |
| CciI | TCATGA | 3 cut(s) | 751, 2089, 2382 |
| CfoI | GCGC | 1 cut(s) | 967 |
| Cfr13I | GGNCC | 2 cut(s) | 764, 2860 |
| Csp6I | GTAC | 4 cut(s) | 1455, 1649, 2217, 2568 |
| CviQI | GTAC | 4 cut(s) | 1455, 1649, 2217, 2568 |
| DraI | TTTAAA | 2 cut(s) | 889, 1578 |
| EaeI | YGGCCR | 3 cut(s) | 259, 366, 1281 |
| Eam1104I | CTCTTC | 3 cut(s) | 1752, 1872, 1911 |
| EarI | CTCTTC | 3 cut(s) | 1752, 1872, 1911 |
| Eco130I | CCWWGG | 2 cut(s) | 1424, 1871 |
| Eco32I | GATATC | 2 cut(s) | 914, 1043 |
| Eco47I | GGWCC | 2 cut(s) | 764, 2860 |
| Eco47III | AGCGCT | 1 cut(s) | 966 |
| Eco57I | CTGAAG | 2 cut(s) | 159, 1407 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 906 |
| EcoRI | GAATTC | 2 cut(s) | 530, 1928 |
| EcoRII | CCWGG | 4 cut(s) | 766, 1318, 1644, 2356 |
| EcoRV | GATATC | 2 cut(s) | 914, 1043 |
| EcoT14I | CCWWGG | 2 cut(s) | 1424, 1871 |
| EcoT22I | ATGCAT | 1 cut(s) | 1263 |
| ErhI | CCWWGG | 2 cut(s) | 1424, 1871 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 846, 878, 900, 932, 2769, 2801 |
| FaqI | GGGAC | 1 cut(s) | 1730 |
| FbaI | TGATCA | 2 cut(s) | 904, 1312 |
| FblI | GTMKAC | 1 cut(s) | 805 |
| Fnu4HI | GCNGC | 6 cut(s) | 246, 492, 1271, 1356, 1642, 2680 |
| FokI | GGATG | 8 cut(s) | 152, 478, 504, 746, 1191, 2426, 2463, 2874 |
| Fsp4HI | GCNGC | 6 cut(s) | 246, 492, 1271, 1356, 1642, 2680 |
| FspBI | CTAG | 7 cut(s) | 962, 1446, 1616, 1676, 2700, 2819, 2868 |
| GlaI | GCGC | 1 cut(s) | 966 |
| GluI | GCNGC | 6 cut(s) | 246, 492, 1271, 1356, 1642, 2680 |
| GsaI | CCCAGC | 1 cut(s) | 2160 |
| HaeII | RGCGCY | 1 cut(s) | 968 |
| HaeIII | GGCC | 5 cut(s) | 261, 368, 660, 1283, 1355 |
| HapII | CCGG | 1 cut(s) | 1730 |
| HhaI | GCGC | 1 cut(s) | 967 |
| Hin6I | GCGC | 1 cut(s) | 965 |
| HinP1I | GCGC | 1 cut(s) | 965 |
| HincII | GTYRAC | 3 cut(s) | 646, 1814, 2521 |
| HindII | GTYRAC | 3 cut(s) | 646, 1814, 2521 |
| HindIII | AAGCTT | 3 cut(s) | 1078, 1845, 2177 |
| HpaI | GTTAAC | 1 cut(s) | 2521 |
| HpaII | CCGG | 1 cut(s) | 1730 |
| HphI | GGTGA | 7 cut(s) | 49, 334, 1307, 1719, 1790, 1846, 2630 |
| Hpy188I | TCNGA | 9 cut(s) | 928, 1073, 1102, 1300, 1502, 1741, 1792, 2299, 2926 |
| Hpy99I | CGWCG | 1 cut(s) | 1098 |
| HpyAV | CCTTC | 7 cut(s) | 114, 1099, 1391, 1502, 2222, 2570, 2833 |
| HpyCH4III | ACNGT | 6 cut(s) | 947, 1237, 1922, 2023, 2536, 2635 |
| HpyCH4IV | ACGT | 4 cut(s) | 96, 193, 802, 1093 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 40, 497, 1267, 2078, 2755 |
| HpySE526I | ACGT | 4 cut(s) | 96, 193, 802, 1093 |
| HspAI | GCGC | 1 cut(s) | 965 |
| Ksp22I | TGATCA | 2 cut(s) | 904, 1312 |
| KspAI | GTTAAC | 1 cut(s) | 2521 |
| LmnI | GCTCC | 1 cut(s) | 1638 |
| Lsp1109I | GCAGC | 5 cut(s) | 232, 478, 1257, 1653, 2691 |
| LweI | GCATC | 4 cut(s) | 724, 1169, 1559, 2068 |
| MaeI | CTAG | 7 cut(s) | 962, 1446, 1616, 1676, 2700, 2819, 2868 |
| MaeII | ACGT | 4 cut(s) | 96, 193, 802, 1093 |
| MfeI | CAATTG | 1 cut(s) | 1022 |
| MflI | RGATCY | 2 cut(s) | 980, 2125 |
| MlsI | TGGCCA | 3 cut(s) | 261, 368, 1283 |
| MluNI | TGGCCA | 3 cut(s) | 261, 368, 1283 |
| MlyI | GAGTC | 5 cut(s) | 1062, 1897, 2110, 2578, 2918 |
| MmeI | TCCRAC | 3 cut(s) | 361, 433, 724 |
| Mox20I | TGGCCA | 3 cut(s) | 261, 368, 1283 |
| Mph1103I | ATGCAT | 1 cut(s) | 1263 |
| MroXI | GAANNNNTTC | 1 cut(s) | 388 |
| MscI | TGGCCA | 3 cut(s) | 261, 368, 1283 |
| Msp20I | TGGCCA | 3 cut(s) | 261, 368, 1283 |
| MspA1I | CMGCKG | 2 cut(s) | 491, 2423 |
| MspCI | CTTAAG | 1 cut(s) | 2674 |
| MspI | CCGG | 1 cut(s) | 1730 |
| MspR9I | CCNGG | 4 cut(s) | 768, 1320, 1646, 2358 |
| MunI | CAATTG | 1 cut(s) | 1022 |
| Mva1269I | GAATGC | 1 cut(s) | 396 |
| MvaI | CCWGG | 4 cut(s) | 768, 1320, 1646, 2358 |
| MvnI | CGCG | 1 cut(s) | 558 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 40, 497, 1267, 2078, 2755 |
| NlaIV | GGNNCC | 2 cut(s) | 1343, 1430 |
| NruI | TCGCGA | 1 cut(s) | 558 |
| NsiI | ATGCAT | 1 cut(s) | 1263 |
| NspI | RCATGY | 4 cut(s) | 77, 113, 365, 884 |
| PaeI | GCATGC | 1 cut(s) | 884 |
| PagI | TCATGA | 3 cut(s) | 751, 2089, 2382 |
| PciI | ACATGT | 3 cut(s) | 73, 109, 361 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 799 |
| PctI | GAATGC | 1 cut(s) | 396 |
| PdmI | GAANNNNTTC | 1 cut(s) | 388 |
| PfeI | GAWTC | 9 cut(s) | 11, 384, 1203, 1488, 1696, 1795, 2035, 2333, 2353 |
| PflFI | GACNNNGTC | 1 cut(s) | 1157 |
| PfoI | TCCNGGA | 1 cut(s) | 766 |
| PkrI | GCNGC | 6 cut(s) | 247, 493, 1272, 1357, 1643, 2681 |
| PleI | GAGTC | 5 cut(s) | 1062, 1897, 2109, 2578, 2917 |
| PpsI | GAGTC | 5 cut(s) | 1062, 1897, 2109, 2578, 2917 |
| PscI | ACATGT | 3 cut(s) | 73, 109, 361 |
| PsiI | TTATAA | 4 cut(s) | 507, 1232, 1668, 2639 |
| Psp6I | CCWGG | 4 cut(s) | 766, 1318, 1644, 2356 |
| PspFI | CCCAGC | 1 cut(s) | 2156 |
| PspGI | CCWGG | 4 cut(s) | 766, 1318, 1644, 2356 |
| PspN4I | GGNNCC | 2 cut(s) | 1343, 1430 |
| PspPI | GGNCC | 2 cut(s) | 764, 2860 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 792, 824 |
| PsuI | RGATCY | 2 cut(s) | 980, 2125 |
| PsyI | GACNNNGTC | 1 cut(s) | 1157 |
| PvuII | CAGCTG | 2 cut(s) | 491, 2423 |
| RruI | TCGCGA | 1 cut(s) | 558 |
| RsaI | GTAC | 4 cut(s) | 1456, 1650, 2218, 2569 |
| RsaNI | GTAC | 4 cut(s) | 1455, 1649, 2217, 2568 |
| SatI | GCNGC | 6 cut(s) | 246, 492, 1271, 1356, 1642, 2680 |
| Sau96I | GGNCC | 2 cut(s) | 764, 2860 |
| SchI | GAGTC | 5 cut(s) | 1062, 1897, 2110, 2578, 2918 |
| ScrFI | CCNGG | 4 cut(s) | 768, 1320, 1646, 2358 |
| SfaNI | GCATC | 4 cut(s) | 724, 1169, 1559, 2068 |
| SfcI | CTRYAG | 1 cut(s) | 2444 |
| SinI | GGWCC | 2 cut(s) | 764, 2860 |
| SmlI | CTYRAG | 3 cut(s) | 863, 1366, 2674 |
| SmoI | CTYRAG | 3 cut(s) | 863, 1366, 2674 |
| SpeI | ACTAGT | 1 cut(s) | 1615 |
| SphI | GCATGC | 1 cut(s) | 884 |
| SsiI | CCGC | 4 cut(s) | 8, 1182, 1356, 2463 |
| SspI | AATATT | 3 cut(s) | 87, 328, 2687 |
| SspMI | CTAG | 7 cut(s) | 962, 1446, 1616, 1676, 2700, 2819, 2868 |
| StyD4I | CCNGG | 4 cut(s) | 766, 1318, 1644, 2356 |
| StyI | CCWWGG | 2 cut(s) | 1424, 1871 |
| TaaI | ACNGT | 6 cut(s) | 947, 1237, 1922, 2023, 2536, 2635 |
| TaiI | ACGT | 4 cut(s) | 99, 196, 805, 1096 |
| TaqI | TCGA | 4 cut(s) | 14, 1066, 1602, 2738 |
| TaqII | GACCGA | 1 cut(s) | 1799 |
| TatI | WGTACW | 1 cut(s) | 1454 |
| TauI | GCSGC | 1 cut(s) | 1358 |
| TfiI | GAWTC | 9 cut(s) | 11, 384, 1203, 1488, 1696, 1795, 2035, 2333, 2353 |
| TscAI | CASTG | 4 cut(s) | 1213, 1640, 2170, 2353 |
| TseI | GCWGC | 5 cut(s) | 245, 491, 1270, 1641, 2679 |
| TspGWI | ACGGA | 3 cut(s) | 141, 158, 1205 |
| TspRI | CASTG | 4 cut(s) | 1213, 1640, 2170, 2353 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1157 |
| Vha464I | CTTAAG | 1 cut(s) | 2674 |
| VpaK11BI | GGWCC | 2 cut(s) | 764, 2860 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 906 |
| XapI | RAATTY | 9 cut(s) | 250, 456, 513, 530, 1411, 1928, 2239, 2246, 2491 |
| XceI | RCATGY | 4 cut(s) | 77, 113, 365, 884 |
| XmiI | GTMKAC | 1 cut(s) | 805 |
| XmnI | GAANNNNTTC | 1 cut(s) | 388 |
| XspI | CTAG | 7 cut(s) | 962, 1446, 1616, 1676, 2700, 2819, 2868 |
| Zsp2I | ATGCAT | 1 cut(s) | 1263 |