TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 23 - 194 | 1.1e-52 | TIR domain |
| TIR_2 | PF13676 | 25 - 148 | 5.2e-17 | TIR domain |
| NB-ARC | PF00931 | 205 - 374 | 1e-21 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 445 - 513 | 6.5e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 639 - 726 | 1.9e-06 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1869 |
| AccI | GTMKAC | 1 cut(s) | 936 |
| AccII | CGCG | 2 cut(s) | 103, 1548 |
| AccIII | TCCGGA | 1 cut(s) | 372 |
| AciI | CCGC | 4 cut(s) | 214, 266, 1546, 2075 |
| AclI | AACGTT | 1 cut(s) | 1456 |
| AclWI | GGATC | 8 cut(s) | 353, 498, 701, 884, 905, 1219, 1627, 1915 |
| AcsI | RAATTY | 8 cut(s) | 475, 675, 731, 1238, 1437, 1629, 1802, 2085 |
| AcuI | CTGAAG | 3 cut(s) | 70, 348, 486 |
| AfaI | GTAC | 1 cut(s) | 858 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1433 |
| AflIII | ACRYGT | 1 cut(s) | 1650 |
| AgsI | TTSAA | 9 cut(s) | 255, 749, 756, 1292, 1454, 1634, 1802, 1918, 1971 |
| AhlI | ACTAGT | 1 cut(s) | 331 |
| AjnI | CCWGG | 2 cut(s) | 129, 1555 |
| Alw21I | GWGCWC | 1 cut(s) | 1749 |
| Alw26I | GTCTC | 2 cut(s) | 414, 1708 |
| AlwI | GGATC | 8 cut(s) | 353, 498, 701, 884, 905, 1219, 1627, 1915 |
| Aor13HI | TCCGGA | 1 cut(s) | 372 |
| AoxI | GGCC | 3 cut(s) | 118, 132, 970 |
| ApeKI | GCWGC | 3 cut(s) | 455, 470, 2079 |
| ApoI | RAATTY | 8 cut(s) | 475, 675, 731, 1238, 1437, 1629, 1802, 2085 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 819 |
| AspLEI | GCGC | 2 cut(s) | 105, 1581 |
| AspS9I | GGNCC | 5 cut(s) | 118, 228, 970, 1444, 1903 |
| AsuHPI | GGTGA | 3 cut(s) | 104, 1950, 2021 |
| AvaII | GGWCC | 3 cut(s) | 228, 1444, 1903 |
| BanII | GRGCYC | 1 cut(s) | 1749 |
| BauI | CACGAG | 1 cut(s) | 1014 |
| BbsI | GAAGAC | 1 cut(s) | 102 |
| Bbv12I | GWGCWC | 1 cut(s) | 1749 |
| BbvI | GCAGC | 3 cut(s) | 442, 457, 2066 |
| BccI | CCATC | 6 cut(s) | 129, 503, 1066, 1310, 1378, 1779 |
| BceAI | ACGGC | 1 cut(s) | 957 |
| BciT130I | CCWGG | 2 cut(s) | 131, 1557 |
| BclI | TGATCA | 1 cut(s) | 406 |
| BcoDI | GTCTC | 2 cut(s) | 414, 1708 |
| BcuI | ACTAGT | 1 cut(s) | 331 |
| BfaI | CTAG | 5 cut(s) | 293, 332, 1193, 1208, 1838 |
| BfmI | CTRYAG | 1 cut(s) | 2127 |
| BfoI | RGCGCY | 1 cut(s) | 1582 |
| BfuAI | ACCTGC | 1 cut(s) | 1869 |
| BglII | AGATCT | 1 cut(s) | 234 |
| BisI | GCNGC | 4 cut(s) | 456, 471, 1546, 2080 |
| BlsI | GCNGC | 4 cut(s) | 457, 472, 1547, 2081 |
| Bme1390I | CCNGG | 2 cut(s) | 131, 1557 |
| Bme18I | GGWCC | 3 cut(s) | 228, 1444, 1903 |
| BmgT120I | GGNCC | 5 cut(s) | 118, 228, 970, 1444, 1903 |
| BmiI | GGNNCC | 3 cut(s) | 229, 1790, 1904 |
| BmrFI | CCNGG | 2 cut(s) | 131, 1557 |
| BmrI | ACTGGG | 1 cut(s) | 332 |
| BmsI | GCATC | 3 cut(s) | 1485, 1579, 1997 |
| BmuI | ACTGGG | 1 cut(s) | 332 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1833 |
| BpiI | GAAGAC | 1 cut(s) | 102 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 442, 474, 1731, 1763 |
| BpmI | CTGGAG | 2 cut(s) | 1773, 2006 |
| BpuEI | CTTGAG | 5 cut(s) | 100, 305, 1141, 1286, 2111 |
| BsaBI | GATNNNNATC | 1 cut(s) | 357 |
| BsaJI | CCNNGG | 3 cut(s) | 223, 1555, 2102 |
| BsaWI | WCCGGW | 1 cut(s) | 372 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1261, 1291, 1833, 1863 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1433 |
| Bse1I | ACTGG | 6 cut(s) | 213, 273, 327, 1756, 1799, 2032 |
| Bse8I | GATNNNNATC | 1 cut(s) | 357 |
| BseAI | TCCGGA | 1 cut(s) | 372 |
| BseBI | CCWGG | 2 cut(s) | 131, 1557 |
| BseDI | CCNNGG | 3 cut(s) | 223, 1555, 2102 |
| BseGI | GGATG | 5 cut(s) | 47, 540, 908, 1081, 2178 |
| BseJI | GATNNNNATC | 1 cut(s) | 357 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1433 |
| BseMII | CTCAG | 4 cut(s) | 192, 1709, 1891, 1945 |
| BseNI | ACTGG | 6 cut(s) | 213, 273, 327, 1756, 1799, 2032 |
| BseRI | GAGGAG | 4 cut(s) | 31, 302, 2003, 2108 |
| BseXI | GCAGC | 3 cut(s) | 442, 457, 2066 |
| BseYI | CCCAGC | 1 cut(s) | 486 |
| Bsh1236I | CGCG | 2 cut(s) | 103, 1548 |
| BshFI | GGCC | 3 cut(s) | 120, 134, 972 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1749 |
| BsiSI | CCGG | 1 cut(s) | 373 |
| BslFI | GGGAC | 4 cut(s) | 1113, 1355, 1526, 1622 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1433 |
| BsmAI | GTCTC | 2 cut(s) | 414, 1708 |
| BsmFI | GGGAC | 4 cut(s) | 1113, 1355, 1526, 1622 |
| BsnI | GGCC | 3 cut(s) | 120, 134, 972 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1749 |
| Bsp13I | TCCGGA | 1 cut(s) | 372 |
| BspACI | CCGC | 4 cut(s) | 214, 266, 1546, 2075 |
| BspANI | GGCC | 3 cut(s) | 120, 134, 972 |
| BspCNI | CTCAG | 4 cut(s) | 193, 1710, 1890, 1944 |
| BspEI | TCCGGA | 1 cut(s) | 372 |
| BspFNI | CGCG | 2 cut(s) | 103, 1548 |
| BspLI | GGNNCC | 3 cut(s) | 229, 1790, 1904 |
| BspMI | ACCTGC | 1 cut(s) | 1869 |
| BspPI | GGATC | 8 cut(s) | 353, 498, 701, 884, 905, 1219, 1627, 1915 |
| BsrI | ACTGG | 6 cut(s) | 213, 273, 327, 1756, 1799, 2032 |
| BssECI | CCNNGG | 3 cut(s) | 223, 1555, 2102 |
| BssSI | CACGAG | 1 cut(s) | 1014 |
| BssT1I | CCWWGG | 2 cut(s) | 223, 2102 |
| Bst2BI | CACGAG | 1 cut(s) | 1014 |
| Bst2UI | CCWGG | 2 cut(s) | 131, 1557 |
| Bst4CI | ACNGT | 1 cut(s) | 709 |
| Bst6I | CTCTTC | 2 cut(s) | 178, 1706 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1504 |
| BstC8I | GCNNGC | 3 cut(s) | 216, 1110, 2077 |
| BstDEI | CTNAG | 7 cut(s) | 179, 201, 494, 1660, 1718, 1877, 1931 |
| BstF5I | GGATG | 5 cut(s) | 47, 540, 908, 1081, 2178 |
| BstFNI | CGCG | 2 cut(s) | 103, 1548 |
| BstH2I | RGCGCY | 1 cut(s) | 1582 |
| BstHHI | GCGC | 2 cut(s) | 105, 1581 |
| BstMAI | GTCTC | 2 cut(s) | 414, 1708 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1495, 1504, 2062 |
| BstNI | CCWGG | 2 cut(s) | 131, 1557 |
| BstNSI | RCATGY | 1 cut(s) | 1654 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1833 |
| BstSCI | CCNGG | 2 cut(s) | 129, 1555 |
| BstSFI | CTRYAG | 1 cut(s) | 2127 |
| BstUI | CGCG | 2 cut(s) | 103, 1548 |
| BstV1I | GCAGC | 3 cut(s) | 442, 457, 2066 |
| BstV2I | GAAGAC | 1 cut(s) | 102 |
| BstX2I | RGATCY | 5 cut(s) | 234, 490, 1211, 1619, 1920 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2039 |
| BstYI | RGATCY | 5 cut(s) | 234, 490, 1211, 1619, 1920 |
| BsuRI | GGCC | 3 cut(s) | 120, 134, 972 |
| BtsCI | GGATG | 5 cut(s) | 47, 540, 908, 1081, 2178 |
| BtsIMutI | CAGTG | 5 cut(s) | 320, 1050, 1749, 1792, 1939 |
| BveI | ACCTGC | 1 cut(s) | 1869 |
| Cac8I | GCNNGC | 3 cut(s) | 216, 1110, 2077 |
| CfoI | GCGC | 2 cut(s) | 105, 1581 |
| Cfr13I | GGNCC | 5 cut(s) | 118, 228, 970, 1444, 1903 |
| Csp6I | GTAC | 1 cut(s) | 857 |
| CviQI | GTAC | 1 cut(s) | 857 |
| DdeI | CTNAG | 7 cut(s) | 179, 201, 494, 1660, 1718, 1877, 1931 |
| DraI | TTTAAA | 1 cut(s) | 1117 |
| Eam1104I | CTCTTC | 2 cut(s) | 178, 1706 |
| EarI | CTCTTC | 2 cut(s) | 178, 1706 |
| Ecl136II | GAGCTC | 1 cut(s) | 1747 |
| Eco130I | CCWWGG | 2 cut(s) | 223, 2102 |
| Eco24I | GRGCYC | 1 cut(s) | 1749 |
| Eco32I | GATATC | 1 cut(s) | 832 |
| Eco47I | GGWCC | 3 cut(s) | 228, 1444, 1903 |
| Eco53kI | GAGCTC | 1 cut(s) | 1747 |
| Eco57I | CTGAAG | 3 cut(s) | 70, 348, 486 |
| EcoICRI | GAGCTC | 1 cut(s) | 1747 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1444, 1903 |
| EcoRI | GAATTC | 2 cut(s) | 1437, 1802 |
| EcoRII | CCWGG | 2 cut(s) | 129, 1555 |
| EcoRV | GATATC | 1 cut(s) | 832 |
| EcoT14I | CCWWGG | 2 cut(s) | 223, 2102 |
| EcoT22I | ATGCAT | 1 cut(s) | 1500 |
| EcoT38I | GRGCYC | 1 cut(s) | 1749 |
| ErhI | CCWWGG | 2 cut(s) | 223, 2102 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 804, 836, 1131, 1163, 2044, 2076 |
| FaqI | GGGAC | 4 cut(s) | 1113, 1355, 1526, 1622 |
| FauI | CCCGC | 2 cut(s) | 207, 2068 |
| FbaI | TGATCA | 1 cut(s) | 406 |
| FblI | GTMKAC | 1 cut(s) | 936 |
| Fnu4HI | GCNGC | 4 cut(s) | 456, 471, 1546, 2080 |
| FokI | GGATG | 4 cut(s) | 34, 547, 915, 1088 |
| FriOI | GRGCYC | 1 cut(s) | 1749 |
| Fsp4HI | GCNGC | 4 cut(s) | 456, 471, 1546, 2080 |
| FspBI | CTAG | 5 cut(s) | 293, 332, 1193, 1208, 1838 |
| GlaI | GCGC | 2 cut(s) | 104, 1580 |
| GluI | GCNGC | 4 cut(s) | 456, 471, 1546, 2080 |
| GsaI | CCCAGC | 1 cut(s) | 490 |
| GsuI | CTGGAG | 2 cut(s) | 1773, 2006 |
| HaeII | RGCGCY | 1 cut(s) | 1582 |
| HaeIII | GGCC | 3 cut(s) | 120, 134, 972 |
| HapII | CCGG | 1 cut(s) | 373 |
| HhaI | GCGC | 2 cut(s) | 105, 1581 |
| Hin6I | GCGC | 2 cut(s) | 103, 1579 |
| HinP1I | GCGC | 2 cut(s) | 103, 1579 |
| HincII | GTYRAC | 2 cut(s) | 868, 937 |
| HindII | GTYRAC | 2 cut(s) | 868, 937 |
| HindIII | AAGCTT | 2 cut(s) | 742, 750 |
| HpaII | CCGG | 1 cut(s) | 373 |
| HphI | GGTGA | 3 cut(s) | 104, 1950, 2021 |
| Hpy166II | GTNNAC | 4 cut(s) | 298, 868, 937, 2029 |
| Hpy188I | TCNGA | 8 cut(s) | 367, 411, 698, 829, 902, 1585, 1624, 1880 |
| Hpy8I | GTNNAC | 4 cut(s) | 298, 868, 937, 2029 |
| Hpy99I | CGWCG | 1 cut(s) | 170 |
| HpyAV | CCTTC | 7 cut(s) | 121, 372, 512, 773, 830, 903, 1155 |
| HpyCH4III | ACNGT | 1 cut(s) | 709 |
| HpyCH4IV | ACGT | 4 cut(s) | 660, 859, 1456, 1884 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1495, 1504, 2062 |
| HpyF3I | CTNAG | 7 cut(s) | 179, 201, 494, 1660, 1718, 1877, 1931 |
| HpySE526I | ACGT | 4 cut(s) | 660, 859, 1456, 1884 |
| HspAI | GCGC | 2 cut(s) | 103, 1579 |
| Kpn2I | TCCGGA | 1 cut(s) | 372 |
| Ksp22I | TGATCA | 1 cut(s) | 406 |
| LmnI | GCTCC | 5 cut(s) | 289, 946, 1656, 1794, 2095 |
| Lsp1109I | GCAGC | 3 cut(s) | 442, 457, 2066 |
| LweI | GCATC | 3 cut(s) | 1485, 1579, 1997 |
| MaeI | CTAG | 5 cut(s) | 293, 332, 1193, 1208, 1838 |
| MaeII | ACGT | 4 cut(s) | 660, 859, 1456, 1884 |
| MaeIII | GTNAC | 3 cut(s) | 974, 1415, 2131 |
| MfeI | CAATTG | 1 cut(s) | 1527 |
| MflI | RGATCY | 5 cut(s) | 234, 490, 1211, 1619, 1920 |
| MhlI | GDGCHC | 1 cut(s) | 1749 |
| MlyI | GAGTC | 5 cut(s) | 602, 971, 1008, 1632, 1749 |
| MmeI | TCCRAC | 3 cut(s) | 580, 625, 652 |
| Mph1103I | ATGCAT | 1 cut(s) | 1500 |
| MroI | TCCGGA | 1 cut(s) | 372 |
| MroXI | GAANNNNTTC | 1 cut(s) | 819 |
| MslI | CAYNNNNRTG | 1 cut(s) | 639 |
| MspI | CCGG | 1 cut(s) | 373 |
| MspR9I | CCNGG | 2 cut(s) | 131, 1557 |
| MunI | CAATTG | 1 cut(s) | 1527 |
| MvaI | CCWGG | 2 cut(s) | 131, 1557 |
| MvnI | CGCG | 2 cut(s) | 103, 1548 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1495, 1504, 2062 |
| NlaIV | GGNNCC | 3 cut(s) | 229, 1790, 1904 |
| NmuCI | GTSAC | 2 cut(s) | 974, 1415 |
| NsiI | ATGCAT | 1 cut(s) | 1500 |
| NspI | RCATGY | 1 cut(s) | 1654 |
| PciI | ACATGT | 1 cut(s) | 1650 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 171, 1740 |
| PdmI | GAANNNNTTC | 1 cut(s) | 819 |
| PfeI | GAWTC | 8 cut(s) | 150, 269, 1049, 1085, 1430, 1613, 1895, 1937 |
| PflFI | GACNNNGTC | 1 cut(s) | 1391 |
| PkrI | GCNGC | 4 cut(s) | 457, 472, 1547, 2081 |
| PleI | GAGTC | 5 cut(s) | 602, 971, 1007, 1632, 1748 |
| PpsI | GAGTC | 5 cut(s) | 602, 971, 1007, 1632, 1748 |
| PpuMI | RGGWCCY | 2 cut(s) | 1444, 1903 |
| PscI | ACATGT | 1 cut(s) | 1650 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1833 |
| Psp124BI | GAGCTC | 1 cut(s) | 1749 |
| Psp1406I | AACGTT | 1 cut(s) | 1456 |
| Psp5II | RGGWCCY | 2 cut(s) | 1444, 1903 |
| Psp6I | CCWGG | 2 cut(s) | 129, 1555 |
| PspFI | CCCAGC | 1 cut(s) | 486 |
| PspGI | CCWGG | 2 cut(s) | 129, 1555 |
| PspN4I | GGNNCC | 3 cut(s) | 229, 1790, 1904 |
| PspPI | GGNCC | 5 cut(s) | 118, 228, 970, 1444, 1903 |
| PspPPI | RGGWCCY | 2 cut(s) | 1444, 1903 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2124, 2156 |
| PsuI | RGATCY | 5 cut(s) | 234, 490, 1211, 1619, 1920 |
| PsyI | GACNNNGTC | 1 cut(s) | 1391 |
| RsaI | GTAC | 1 cut(s) | 858 |
| RsaNI | GTAC | 1 cut(s) | 857 |
| RseI | CAYNNNNRTG | 1 cut(s) | 639 |
| SacI | GAGCTC | 1 cut(s) | 1749 |
| SalI | GTCGAC | 1 cut(s) | 935 |
| SatI | GCNGC | 4 cut(s) | 456, 471, 1546, 2080 |
| Sau96I | GGNCC | 5 cut(s) | 118, 228, 970, 1444, 1903 |
| SchI | GAGTC | 5 cut(s) | 602, 971, 1008, 1632, 1749 |
| ScrFI | CCNGG | 2 cut(s) | 131, 1557 |
| SduI | GDGCHC | 1 cut(s) | 1749 |
| SfaNI | GCATC | 3 cut(s) | 1485, 1579, 1997 |
| SfcI | CTRYAG | 1 cut(s) | 2127 |
| SinI | GGWCC | 3 cut(s) | 228, 1444, 1903 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 639 |
| SmlI | CTYRAG | 5 cut(s) | 79, 284, 1156, 1301, 2090 |
| SmoI | CTYRAG | 5 cut(s) | 79, 284, 1156, 1301, 2090 |
| SpeI | ACTAGT | 1 cut(s) | 331 |
| SsiI | CCGC | 4 cut(s) | 214, 266, 1546, 2075 |
| SspI | AATATT | 1 cut(s) | 1404 |
| SspMI | CTAG | 5 cut(s) | 293, 332, 1193, 1208, 1838 |
| SstI | GAGCTC | 1 cut(s) | 1749 |
| StyD4I | CCNGG | 2 cut(s) | 129, 1555 |
| StyI | CCWWGG | 2 cut(s) | 223, 2102 |
| TaaI | ACNGT | 1 cut(s) | 709 |
| TaiI | ACGT | 4 cut(s) | 663, 862, 1459, 1887 |
| TaqI | TCGA | 4 cut(s) | 165, 936, 1728, 1743 |
| TauI | GCSGC | 1 cut(s) | 1548 |
| TfiI | GAWTC | 8 cut(s) | 150, 269, 1049, 1085, 1430, 1613, 1895, 1937 |
| TscAI | CASTG | 5 cut(s) | 327, 1050, 1756, 1799, 1939 |
| TseFI | GTSAC | 2 cut(s) | 974, 1415 |
| TseI | GCWGC | 3 cut(s) | 455, 470, 2079 |
| Tsp45I | GTSAC | 2 cut(s) | 974, 1415 |
| TspGWI | ACGGA | 1 cut(s) | 1523 |
| TspRI | CASTG | 5 cut(s) | 327, 1050, 1756, 1799, 1939 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1391 |
| VpaK11BI | GGWCC | 3 cut(s) | 228, 1444, 1903 |
| XapI | RAATTY | 8 cut(s) | 475, 675, 731, 1238, 1437, 1629, 1802, 2085 |
| XceI | RCATGY | 1 cut(s) | 1654 |
| XmiI | GTMKAC | 1 cut(s) | 936 |
| XmnI | GAANNNNTTC | 1 cut(s) | 819 |
| XspI | CTAG | 5 cut(s) | 293, 332, 1193, 1208, 1838 |
| Zsp2I | ATGCAT | 1 cut(s) | 1500 |