Rmu_sc0022054.1_g000001

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0022054.1
OG0000055
Physical Location & Seq
Forward (+)
4285 .. 9119
4835 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0022054.1_g000001.1.cds

Sequence Viewer

Length: 3630 bp
atggctaatgtcaacatagacccaaaagccttcccttcatcatcctcatcctcttccacagaacaatggaggtacgaagtcttcttgagcttcagaggtgaagacacacgcaagggcttcacagaccacctccacacggcattaaggaatgctggaattaacgtttttattgatgagcagctaagaagaggggaagttatagatgccgaactggtgcaggcaatccaactctccatgatctctgtgattgttttttcaagtaattatgccgaatctacttggtgtctggatgagctggtgaagatcatggagtgcaaaagcacattggagcaaatggtattgccaatattctatgatgttgatccttcggttgtcaggaaacagactggtgtttttgcactagcctttcagaaacatgaagagcgcttcgtctcagatacagataaggtaaaaaggtggagaagtactcttactagagctgcaaatttgtctggcttggaacttcagaacaccgcaaatgggcacgaagcaaagttcatcaaggaaattcttcaggagatcattagaaaactgaacaatgggacgtgcttgaatgtagctaggtaccaagttggaattgaatctcgtgtgaaagaaatcagtgattgtctatgtgttggattacctgatcatcgcatagttgcgatttgtggcataggtggaatgggtaaaacaacggttgcgagagccatttataacagcatttatcataggttcgatggaagaagtttccttgaaaatgtgagggaaacgccactgcttgatttgcaaaaccaacttctttctcaaatcttgaaattgaccaatataaaggtaattgatagtgttgctgaagggatcagtgtgatagaaaacagacttagaagtataaaggtacttgttgtagttgatgatgtagatagtgagagccaactagatgctttagctataaaaccttgcccatttgctcctgggagtagaattattataacaacacgagatgaacatgttctaaggagacttcaagtagataatatatatgaggctcgaaagatgaatgaagaagaagcactggagctctttcgtctgcatgcctttggaaatcgttgtcctaataaagaattctctgaactagccagaaaagttgttgattactgtgggggtttgccgctggctcttgaagttttaggttcttttctctccacgaaatatacagcaggagaatggggtagtacattggatctgttgaaaagaactcctaatgacaatattcaaaaaaagcttgagataagctactatgggctaggtgatggtggaactggcgagtacttaaagaatatattccttgatatatcttgcttctttattggaatgcacagaggagaggtcatacgaatattggatggttgcggcatttcttcagaaacaggaattcgtgtcctggaggaaaggcaccttgtatcttttgatgaagtagacaacctgattatgcatgatttggttcgggacatgggcagagaaattgtgcgggcaacatcccccaataaccctgcaaaacgtagtagattgtgggatcacgaagatgtaaaacgcgtgttgggattcaaatctggaactaagaaaattgaaggactagttctagatctgccaagttctgaacacaatagttatagcacagaagcatttagaaatatgcagagtctgcggttgctccaactcaactatgtaaagctcactggaagctacgaatttcttccccaagagttaaattggctctgctggcatggatttcctgaaatgagcataccaaacaactttaatcaacgaagcctagtggctatcgacatgcaatatagcaagctcaagcaagtgtgggagaaccctgaggtacttgagaaattgaaacttctagatctcaggcattcccgttacctaacaaaatcaccagacttttcaaaactcccaaatcttgaggacctgaaactcgacaactgtgagaatttgcatgaggttgaccactccataggaggattgaagaaccttagaaatttatctctagatggcctgaaaggttcaccatccgaatcaagtaatctattgattccttccttagaagacttatcctctctaatgtcattatctcttaggaactgcaatctaactgacgatgcagttcctcagggtctgggaagtctatcctgtttaatagctttggatcttcaaggaaacaattttcataggctacctatcctcagccaccttaccaatcttagatatctaacattggacaattgcaaggaccttgaagaaatcccagatttaccaagaagtttgatgcgtcttgtagcaaaccactgcactgcattagaaagaatgccaaatttttcacatatgtcgaatatgagagaattgcatctcagacattccatcaagctcactgaggttctaggcttggataaatcattgagctgcatggaaatgattcatatggaagggtgcaccagcctcacagatacttttaaggagagtattttgaagggatggactacgagcggtaatggtggtctttttctctctggaaatgacattcctaactggcttacagatgttgacgatgatgaggtcaaatttcaagtgccaatagttttacgccgtagtgtaaaagcactaactgtgtgcattgtctattcttcatcaaatgtctccaaatttggtgaaaatctttatcttcgtgttataaataatacccagcgcactcagtttggcatatggctgaatggcaatgtaactttagctgccaacgaagattatctttggctagcgcatgtgtcaaatgatatcctcaatttggaagggggtgacgcagttgtagcatgtgcaaccttgggacctgagcctttggaggtgaagaaaataggggtcaatgtagaatgggaaaacattatgcttgaatatccaatagactgggagtctcaaccatatctcagtgaagactatgtgaaggaagatgttgaggaaaactacgatgaagatgacaatagtgacactgagaatgaccatgatgaagataactatgttgatgatgactactctgatgatgaggcaggacctagccgtagctaccgaagtctcaaaagaatgaggtctgattttaaggaatggttccaagagaaacgcgcacggcttgttaaagatggatcatgtgcctataacgcctctccggagataaattgctgcaatgagactatagagttgcgacaacaacctggtgttttggcgccagtggatgccgagtcccctaatagagtttctggtttcccaattgggttcacaccttctccattacatgctcattttgtcccgactcagattgagtcctcatctcagggaggaccagaaaatgtctgcacaaagccacaatgtatggggctgcaggcactctaccagcagcaacaaatgctaatccaacaactgcaaactgagaataaggagttgcaaagacaggtgatactatcacaacagccaaatcagaatgttgttgaaagaaattttttgcaacagtgtattccgccagaatctcagatgacaacccaaggacctgatgagttttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

1209

Amino Acids

136.83

Weight (kDa)

5.13

Isoelectric Point (pI)

49.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 735, 1007, 2756
Acc65I GGTACC 1 cut(s) 603
AccB1I GGYRCC 3 cut(s) 603, 1470, 3295
AccBSI CCGCTC 1 cut(s) 2571
AccI GTMKAC 1 cut(s) 1494
AccII CGCG 2 cut(s) 1611, 3195
AccIII TCCGGA 1 cut(s) 3238
AciI CCGC 7 cut(s) 513, 1187, 1428, 1546, 1723, 2571, 3587
AclI AACGTT 1 cut(s) 162
AclWI GGATC 6 cut(s) 356, 884, 1266, 1599, 2241, 3223
AcuI CTGAAG 5 cut(s) 76, 488, 536, 891, 1422
AcyI GRCGYC 1 cut(s) 3296
AfaI GTAC 7 cut(s) 74, 466, 605, 915, 1252, 1346, 1908
AfeI AGCGCT 1 cut(s) 425
AfiI CCNNNNNNNGG 3 cut(s) 136, 519, 2866
AflIII ACRYGT 2 cut(s) 1024, 1609
AhdI GACNNNNNGTC 1 cut(s) 2986
AhlI ACTAGT 1 cut(s) 1651
AjiI CACGTC 1 cut(s) 585
AjnI CCWGG 3 cut(s) 988, 1458, 3283
Alw21I GWGCWC 2 cut(s) 1098, 2519
Alw26I GTCTC 6 cut(s) 436, 1030, 2725, 2994, 3152, 3254
Alw44I GTGCAC 1 cut(s) 2515
AlwI GGATC 6 cut(s) 356, 884, 1266, 1599, 2241, 3223
AlwNI CAGNNNCTG 2 cut(s) 1720, 2203
Aor13HI TCCGGA 1 cut(s) 3238
Aor51HI AGCGCT 1 cut(s) 425
AoxI GGCC 1 cut(s) 2080
ApaLI GTGCAC 1 cut(s) 2515
ApeKI GCWGC 7 cut(s) 178, 479, 2487, 2813, 3252, 3448, 3466
Asp700I GAANNNNTTC 5 cut(s) 549, 1026, 1358, 1770, 2499
Asp718I GGTACC 1 cut(s) 603
AspLEI GCGC 5 cut(s) 426, 2772, 2842, 3197, 3298
AspS9I GGNCC 6 cut(s) 1993, 2317, 2906, 3125, 3410, 3614
AsuHPI GGTGA 9 cut(s) 110, 310, 1337, 1953, 2085, 2744, 2888, 2935, 3535
AsuNHI GCTAGC 1 cut(s) 2836
AvaII GGWCC 6 cut(s) 1993, 2317, 2906, 3125, 3410, 3614
AxyI CCTNAGG 2 cut(s) 1902, 2196
BaeGI GKGCMC 2 cut(s) 525, 2519
BanI GGYRCC 3 cut(s) 603, 1470, 3295
BanII GRGCYC 1 cut(s) 1098
BarI GAAGNNNNNNTAC 4 cut(s) 65, 97, 454, 486
BauI CACGAG 2 cut(s) 624, 1014
BbsI GAAGAC 4 cut(s) 73, 108, 2139, 3015
Bbv12I GWGCWC 2 cut(s) 1098, 2519
BbvCI CCTCAGC 1 cut(s) 2270
BbvI GCAGC 7 cut(s) 190, 466, 2474, 2800, 3239, 3435, 3478
BccI CCATC 8 cut(s) 752, 1322, 1415, 2072, 2104, 2453, 2553, 3206
BceAI ACGGC 4 cut(s) 153, 2655, 3117, 3215
BciT130I CCWGG 3 cut(s) 990, 1460, 3285
BclI TGATCA 1 cut(s) 667
BcoDI GTCTC 6 cut(s) 436, 1030, 2725, 2994, 3152, 3254
BcuI ACTAGT 1 cut(s) 1651
BfmI CTRYAG 2 cut(s) 3264, 3449
BfoI RGCGCY 2 cut(s) 427, 3299
BglII AGATCT 2 cut(s) 1660, 1930
BisI GCNGC 9 cut(s) 179, 480, 1187, 1429, 2488, 2814, 3253, 3449, 3467
BlsI GCNGC 9 cut(s) 180, 481, 1188, 1430, 2489, 2815, 3254, 3450, 3468
BmcAI AGTACT 2 cut(s) 466, 1346
Bme1390I CCNGG 3 cut(s) 990, 1460, 3285
Bme18I GGWCC 6 cut(s) 1993, 2317, 2906, 3125, 3410, 3614
BmeRI GACNNNNNGTC 1 cut(s) 2986
BmgBI CACGTC 1 cut(s) 585
BmgT120I GGNCC 6 cut(s) 1993, 2317, 2906, 3125, 3410, 3614
BmiI GGNNCC 5 cut(s) 605, 1472, 2907, 3182, 3297
BmrFI CCNGG 3 cut(s) 990, 1460, 3285
BmrI ACTGGG 1 cut(s) 2992
BmsI GCATC 6 cut(s) 193, 946, 2176, 2343, 2440, 3295
BmtI GCTAGC 1 cut(s) 2840
BmuI ACTGGG 1 cut(s) 2992
BpiI GAAGAC 4 cut(s) 73, 108, 2139, 3015
BplI GAGNNNNNCTC 2 cut(s) 451, 483
BpmI CTGGAG 2 cut(s) 1112, 1481
Bpu10I CCTNAGC 2 cut(s) 2270, 2910
BpuEI CTTGAG 5 cut(s) 106, 1322, 1865, 1931, 2009
BsaBI GATNNNNATC 2 cut(s) 360, 1624
BsaHI GRCGYC 1 cut(s) 3296
BsaJI CCNNGG 3 cut(s) 989, 2901, 3610
BsaWI WCCGGW 1 cut(s) 3238
BsaXI ACNNNNNCTCC 2 cut(s) 3340, 3370
Bsc4I CCNNNNNNNGG 3 cut(s) 136, 519, 2866
Bse1I ACTGG 8 cut(s) 216, 391, 1095, 1342, 1759, 2618, 2987, 3299
Bse21I CCTNAGG 2 cut(s) 1902, 2196
Bse3DI GCAATG 2 cut(s) 2806, 3262
Bse8I GATNNNNATC 2 cut(s) 360, 1624
BseAI TCCGGA 1 cut(s) 3238
BseBI CCWGG 3 cut(s) 990, 1460, 3285
BseDI CCNNGG 3 cut(s) 989, 2901, 3610
BseGI GGATG 8 cut(s) 41, 47, 295, 1426, 1553, 2096, 2564, 3310
BseJI GATNNNNATC 2 cut(s) 360, 1624
BseLI CCNNNNNNNGG 3 cut(s) 136, 519, 2866
BseMI GCAATG 2 cut(s) 2806, 3262
BseNI ACTGG 8 cut(s) 216, 391, 1095, 1342, 1759, 2618, 2987, 3299
BseRI GAGGAG 1 cut(s) 1413
BseSI GKGCMC 2 cut(s) 525, 2519
BseXI GCAGC 7 cut(s) 190, 466, 2474, 2800, 3239, 3435, 3478
BseYI CCCAGC 1 cut(s) 2766
BsgI GTGCAG 3 cut(s) 236, 2359, 3409
Bsh1236I CGCG 2 cut(s) 1611, 3195
BshFI GGCC 1 cut(s) 2082
BshNI GGYRCC 3 cut(s) 603, 1470, 3295
BsiHKAI GWGCWC 2 cut(s) 1098, 2519
BsiSI CCGG 1 cut(s) 3239
BslFI GGGAC 5 cut(s) 595, 1538, 2919, 3298, 3362
BslI CCNNNNNNNGG 3 cut(s) 136, 519, 2866
BsmAI GTCTC 6 cut(s) 436, 1030, 2725, 2994, 3152, 3254
BsmBI CGTCTC 1 cut(s) 436
BsmFI GGGAC 5 cut(s) 595, 1538, 2919, 3298, 3362
BsmI GAATGC 4 cut(s) 154, 1395, 1939, 2397
BsnI GGCC 1 cut(s) 2082
Bsp1286I GDGCHC 3 cut(s) 525, 1098, 2519
Bsp13I TCCGGA 1 cut(s) 3238
BspACI CCGC 7 cut(s) 513, 1187, 1428, 1546, 1723, 2571, 3587
BspANI GGCC 1 cut(s) 2082
BspEI TCCGGA 1 cut(s) 3238
BspFNI CGCG 2 cut(s) 1611, 3195
BspLI GGNNCC 5 cut(s) 605, 1472, 2907, 3182, 3297
BspMAI CTGCAG 1 cut(s) 3453
BspOI GCTAGC 1 cut(s) 2840
BspPI GGATC 6 cut(s) 356, 884, 1266, 1599, 2241, 3223
BspQI GCTCTTC 1 cut(s) 414
BspT107I GGYRCC 3 cut(s) 603, 1470, 3295
BsrBI CCGCTC 1 cut(s) 2571
BsrDI GCAATG 2 cut(s) 2806, 3262
BsrI ACTGG 8 cut(s) 216, 391, 1095, 1342, 1759, 2618, 2987, 3299
BssECI CCNNGG 3 cut(s) 989, 2901, 3610
BssNI GRCGYC 1 cut(s) 3296
BssSI CACGAG 2 cut(s) 624, 1014
BssT1I CCWWGG 2 cut(s) 2901, 3610
Bst2BI CACGAG 2 cut(s) 624, 1014
Bst2UI CCWGG 3 cut(s) 990, 1460, 3285
Bst4CI ACNGT 5 cut(s) 718, 1175, 2012, 2692, 3579
Bst6I CTCTTC 3 cut(s) 58, 181, 414
BstACI GRCGYC 1 cut(s) 3296
BstAPI GCANNNNNTGC 2 cut(s) 1720, 3475
BstC8I GCNNGC 8 cut(s) 219, 1110, 1191, 1548, 1799, 1877, 2838, 3453
BstF5I GGATG 8 cut(s) 41, 47, 295, 1426, 1553, 2096, 2564, 3310
BstFNI CGCG 2 cut(s) 1611, 3195
BstH2I RGCGCY 2 cut(s) 427, 3299
BstHHI GCGC 5 cut(s) 426, 2772, 2842, 3197, 3298
BstMAI GTCTC 6 cut(s) 436, 1030, 2725, 2994, 3152, 3254
BstMWI GCNNNNNNNGC 6 cut(s) 805, 1720, 1798, 2888, 3230, 3475
BstNI CCWGG 3 cut(s) 990, 1460, 3285
BstNSI RCATGY 6 cut(s) 1028, 1112, 1867, 2846, 2895, 3368
BstSCI CCNGG 3 cut(s) 988, 1458, 3283
BstSFI CTRYAG 2 cut(s) 3264, 3449
BstSLI GKGCMC 2 cut(s) 525, 2519
BstUI CGCG 2 cut(s) 1611, 3195
BstV1I GCAGC 7 cut(s) 190, 466, 2474, 2800, 3239, 3435, 3478
BstV2I GAAGAC 4 cut(s) 73, 108, 2139, 3015
BstX2I RGATCY 4 cut(s) 1258, 1660, 1930, 2233
BstXI CCANNNNNNTGG 1 cut(s) 2982
BstYI RGATCY 4 cut(s) 1258, 1660, 1930, 2233
Bsu36I CCTNAGG 2 cut(s) 1902, 2196
BsuRI GGCC 1 cut(s) 2082
BtgZI GCGATG 1 cut(s) 656
BtrI CACGTC 1 cut(s) 585
BtsCI GGATG 8 cut(s) 41, 47, 295, 1426, 1553, 2096, 2564, 3310
BtsI GCAGTG 3 cut(s) 794, 2371, 2376
Cac8I GCNNGC 8 cut(s) 219, 1110, 1191, 1548, 1799, 1877, 2838, 3453
CaiI CAGNNNCTG 2 cut(s) 1720, 2203
CfoI GCGC 5 cut(s) 426, 2772, 2842, 3197, 3298
Cfr13I GGNCC 6 cut(s) 1993, 2317, 2906, 3125, 3410, 3614
CseI GACGC 2 cut(s) 2345, 2888
CsiI ACCWGGT 1 cut(s) 3283
Csp6I GTAC 7 cut(s) 73, 465, 604, 914, 1251, 1345, 1907
CviQI GTAC 7 cut(s) 73, 465, 604, 914, 1251, 1345, 1907
DinI GGCGCC 1 cut(s) 3297
DriI GACNNNNNGTC 1 cut(s) 2986
Eam1104I CTCTTC 3 cut(s) 58, 181, 414
Eam1105I GACNNNNNGTC 1 cut(s) 2986
EarI CTCTTC 3 cut(s) 58, 181, 414
EciI GGCGGA 1 cut(s) 3576
Ecl136II GAGCTC 1 cut(s) 1096
Eco130I CCWWGG 2 cut(s) 2901, 3610
Eco24I GRGCYC 1 cut(s) 1098
Eco32I GATATC 2 cut(s) 2294, 2857
Eco47I GGWCC 6 cut(s) 1993, 2317, 2906, 3125, 3410, 3614
Eco47III AGCGCT 1 cut(s) 425
Eco53kI GAGCTC 1 cut(s) 1096
Eco57I CTGAAG 5 cut(s) 76, 488, 536, 891, 1422
Eco81I CCTNAGG 2 cut(s) 1902, 2196
EcoICRI GAGCTC 1 cut(s) 1096
EcoO109I RGGNCCY 5 cut(s) 1993, 2317, 2906, 3125, 3614
EcoRI GAATTC 2 cut(s) 1139, 1449
EcoRII CCWGG 3 cut(s) 988, 1458, 3283
EcoRV GATATC 2 cut(s) 2294, 2857
EcoT14I CCWWGG 2 cut(s) 2901, 3610
EcoT22I ATGCAT 1 cut(s) 1512
EcoT38I GRGCYC 1 cut(s) 1098
EgeI GGCGCC 1 cut(s) 3297
EheI GGCGCC 1 cut(s) 3297
ErhI CCWWGG 2 cut(s) 2901, 3610
Esp3I CGTCTC 1 cut(s) 436
FalI AAGNNNNNCTT 2 cut(s) 2814, 2846
FaqI GGGAC 5 cut(s) 595, 1538, 2919, 3298, 3362
FauI CCCGC 1 cut(s) 1539
FauNDI CATATG 3 cut(s) 2409, 2505, 2786
FbaI TGATCA 1 cut(s) 667
FblI GTMKAC 1 cut(s) 1494
Fnu4HI GCNGC 9 cut(s) 179, 480, 1187, 1429, 2488, 2814, 3253, 3449, 3467
FokI GGATG 8 cut(s) 28, 34, 302, 1433, 1540, 2083, 2571, 3317
FriOI GRGCYC 1 cut(s) 1098
Fsp4HI GCNGC 9 cut(s) 179, 480, 1187, 1429, 2488, 2814, 3253, 3449, 3467
GlaI GCGC 5 cut(s) 425, 2771, 2841, 3196, 3297
GluI GCNGC 9 cut(s) 179, 480, 1187, 1429, 2488, 2814, 3253, 3449, 3467
GsaI CCCAGC 1 cut(s) 2770
GsuI CTGGAG 2 cut(s) 1112, 1481
HaeII RGCGCY 2 cut(s) 427, 3299
HaeIII GGCC 1 cut(s) 2082
HapII CCGG 1 cut(s) 3239
HgaI GACGC 2 cut(s) 2345, 2888
HhaI GCGC 5 cut(s) 426, 2772, 2842, 3197, 3298
Hin1I GRCGYC 1 cut(s) 3296
Hin6I GCGC 5 cut(s) 424, 2770, 2840, 3195, 3296
HinP1I GCGC 5 cut(s) 424, 2770, 2840, 3195, 3296
HincII GTYRAC 3 cut(s) 13, 2032, 2629
HindII GTYRAC 3 cut(s) 13, 2032, 2629
HindIII AAGCTT 1 cut(s) 1298
HpaII CCGG 1 cut(s) 3239
HphI GGTGA 9 cut(s) 110, 310, 1337, 1953, 2085, 2744, 2888, 2935, 3535
Hpy166II GTNNAC 7 cut(s) 13, 1495, 2032, 2093, 2517, 2629, 3348
Hpy8I GTNNAC 7 cut(s) 13, 1495, 2032, 2093, 2517, 2629, 3348
HpyCH4III ACNGT 5 cut(s) 718, 1175, 2012, 2692, 3579
HpyCH4IV ACGT 3 cut(s) 162, 584, 1576
HpyF10VI GCNNNNNNNGC 6 cut(s) 805, 1720, 1798, 2888, 3230, 3475
HpySE526I ACGT 3 cut(s) 162, 584, 1576
Hsp92I GRCGYC 1 cut(s) 3296
HspAI GCGC 5 cut(s) 424, 2770, 2840, 3195, 3296
KasI GGCGCC 1 cut(s) 3295
Kpn2I TCCGGA 1 cut(s) 3238
KpnI GGTACC 1 cut(s) 607
Ksp22I TGATCA 1 cut(s) 667
LguI GCTCTTC 1 cut(s) 414
LmnI GCTCC 4 cut(s) 328, 991, 1093, 1734
Lsp1109I GCAGC 7 cut(s) 190, 466, 2474, 2800, 3239, 3435, 3478
LweI GCATC 6 cut(s) 193, 946, 2176, 2343, 2440, 3295
MabI ACCWGGT 1 cut(s) 3283
MaeII ACGT 3 cut(s) 162, 584, 1576
MaeIII GTNAC 4 cut(s) 1946, 2803, 2876, 3059
MbiI CCGCTC 1 cut(s) 2571
MfeI CAATTG 2 cut(s) 2308, 3339
MflI RGATCY 4 cut(s) 1258, 1660, 1930, 2233
MhlI GDGCHC 3 cut(s) 525, 1098, 2519
MluI ACGCGT 1 cut(s) 1609
Mly113I GGCGCC 1 cut(s) 3296
MlyI GAGTC 5 cut(s) 1726, 2996, 3320, 3376, 3401
MmeI TCCRAC 5 cut(s) 250, 592, 637, 1756, 3508
Mph1103I ATGCAT 1 cut(s) 1512
MroI TCCGGA 1 cut(s) 3238
MroXI GAANNNNTTC 5 cut(s) 549, 1026, 1358, 1770, 2499
MseI TTAA 9 cut(s) 143, 159, 1349, 1784, 1836, 2222, 2538, 3171, 3207
MslI CAYNNNNRTG 2 cut(s) 1599, 2495
MspA1I CMGCKG 1 cut(s) 1189
MspI CCGG 1 cut(s) 3239
MspR9I CCNGG 3 cut(s) 990, 1460, 3285
MunI CAATTG 2 cut(s) 2308, 3339
Mva1269I GAATGC 4 cut(s) 154, 1395, 1939, 2397
MvaI CCWGG 3 cut(s) 990, 1460, 3285
MvnI CGCG 2 cut(s) 1611, 3195
MwoI GCNNNNNNNGC 6 cut(s) 805, 1720, 1798, 2888, 3230, 3475
NarI GGCGCC 1 cut(s) 3296
NdeI CATATG 3 cut(s) 2409, 2505, 2786
NheI GCTAGC 1 cut(s) 2836
NlaIV GGNNCC 5 cut(s) 605, 1472, 2907, 3182, 3297
NmeAIII GCCGAG 1 cut(s) 3334
NmuCI GTSAC 2 cut(s) 2876, 3059
NsiI ATGCAT 1 cut(s) 1512
NspI RCATGY 6 cut(s) 1028, 1112, 1867, 2846, 2895, 3368
PaeI GCATGC 1 cut(s) 1112
PciI ACATGT 1 cut(s) 1024
PciSI GCTCTTC 1 cut(s) 414
PctI GAATGC 4 cut(s) 154, 1395, 1939, 2397
PdmI GAANNNNTTC 5 cut(s) 549, 1026, 1358, 1770, 2499
PfeI GAWTC 7 cut(s) 272, 620, 1620, 2102, 2119, 2500, 3593
PfoI TCCNGGA 1 cut(s) 1458
PkrI GCNGC 9 cut(s) 180, 481, 1188, 1430, 2489, 2815, 3254, 3450, 3468
PleI GAGTC 5 cut(s) 1725, 2995, 3319, 3376, 3400
PluTI GGCGCC 1 cut(s) 3299
PpsI GAGTC 5 cut(s) 1725, 2995, 3319, 3376, 3400
PpuMI RGGWCCY 5 cut(s) 1993, 2317, 2906, 3125, 3614
PscI ACATGT 1 cut(s) 1024
PsiI TTATAA 3 cut(s) 735, 1007, 2756
Psp124BI GAGCTC 1 cut(s) 1098
Psp1406I AACGTT 1 cut(s) 162
Psp5II RGGWCCY 5 cut(s) 1993, 2317, 2906, 3125, 3614
Psp6I CCWGG 3 cut(s) 988, 1458, 3283
PspFI CCCAGC 1 cut(s) 2766
PspGI CCWGG 3 cut(s) 988, 1458, 3283
PspN4I GGNNCC 5 cut(s) 605, 1472, 2907, 3182, 3297
PspPI GGNCC 6 cut(s) 1993, 2317, 2906, 3125, 3410, 3614
PspPPI RGGWCCY 5 cut(s) 1993, 2317, 2906, 3125, 3614
PstI CTGCAG 1 cut(s) 3453
PstNI CAGNNNCTG 2 cut(s) 1720, 2203
PsuI RGATCY 4 cut(s) 1258, 1660, 1930, 2233
RsaI GTAC 7 cut(s) 74, 466, 605, 915, 1252, 1346, 1908
RsaNI GTAC 7 cut(s) 73, 465, 604, 914, 1251, 1345, 1907
RseI CAYNNNNRTG 2 cut(s) 1599, 2495
SacI GAGCTC 1 cut(s) 1098
SapI GCTCTTC 1 cut(s) 414
SaqAI TTAA 9 cut(s) 143, 159, 1349, 1784, 1836, 2222, 2538, 3171, 3207
SatI GCNGC 9 cut(s) 179, 480, 1187, 1429, 2488, 2814, 3253, 3449, 3467
Sau96I GGNCC 6 cut(s) 1993, 2317, 2906, 3125, 3410, 3614
ScaI AGTACT 2 cut(s) 466, 1346
SchI GAGTC 5 cut(s) 1726, 2996, 3320, 3376, 3401
ScrFI CCNGG 3 cut(s) 990, 1460, 3285
SduI GDGCHC 3 cut(s) 525, 1098, 2519
SexAI ACCWGGT 1 cut(s) 3283
SfaNI GCATC 6 cut(s) 193, 946, 2176, 2343, 2440, 3295
SfcI CTRYAG 2 cut(s) 3264, 3449
SfoI GGCGCC 1 cut(s) 3297
SinI GGWCC 6 cut(s) 1993, 2317, 2906, 3125, 3410, 3614
SmiMI CAYNNNNRTG 2 cut(s) 1599, 2495
SmlI CTYRAG 5 cut(s) 85, 1301, 1880, 1910, 1988
SmoI CTYRAG 5 cut(s) 85, 1301, 1880, 1910, 1988
SpeI ACTAGT 1 cut(s) 1651
SphI GCATGC 1 cut(s) 1112
SsiI CCGC 7 cut(s) 513, 1187, 1428, 1546, 1723, 2571, 3587
SspDI GGCGCC 1 cut(s) 3295
SspI AATATT 3 cut(s) 348, 1288, 1416
SstI GAGCTC 1 cut(s) 1098
StyD4I CCNGG 3 cut(s) 988, 1458, 3283
StyI CCWWGG 2 cut(s) 2901, 3610
TaaI ACNGT 5 cut(s) 718, 1175, 2012, 2692, 3579
TaiI ACGT 3 cut(s) 165, 587, 1579
TaqI TCGA 5 cut(s) 756, 1066, 1860, 2004, 2414
TatI WGTACW 3 cut(s) 464, 1250, 1344
TauI GCSGC 2 cut(s) 1189, 1431
TfiI GAWTC 7 cut(s) 272, 620, 1620, 2102, 2119, 2500, 3593
Tru1I TTAA 9 cut(s) 143, 159, 1349, 1784, 1836, 2222, 2538, 3171, 3207
Tru9I TTAA 9 cut(s) 143, 159, 1349, 1784, 1836, 2222, 2538, 3171, 3207
TseFI GTSAC 2 cut(s) 2876, 3059
TseI GCWGC 7 cut(s) 178, 479, 2487, 2813, 3252, 3448, 3466
Tsp45I GTSAC 2 cut(s) 2876, 3059
VneI GTGCAC 1 cut(s) 2515
VpaK11BI GGWCC 6 cut(s) 1993, 2317, 2906, 3125, 3410, 3614
XbaI TCTAGA 3 cut(s) 1657, 1927, 2074
XceI RCATGY 6 cut(s) 1028, 1112, 1867, 2846, 2895, 3368
XmiI GTMKAC 1 cut(s) 1494
XmnI GAANNNNTTC 5 cut(s) 549, 1026, 1358, 1770, 2499
ZrmI AGTACT 2 cut(s) 466, 1346
Zsp2I ATGCAT 1 cut(s) 1512
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.