threonine-type endopeptidase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 2 - 94 | 1.1e-13 | TIR domain |
| NB-ARC | PF00931 | 119 - 272 | 2.2e-23 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 346 - 415 | 1.2e-10 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 551 - 685 | 6.5e-10 | Leucine-rich repeat region |
| Suc_Fer-like | PF06999 | 896 - 1098 | 1.4e-14 | Sucrase/ferredoxin-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 704, 3066 |
| Acc16I | TGCGCA | 1 cut(s) | 3010 |
| Acc36I | ACCTGC | 1 cut(s) | 3041 |
| AccB1I | GGYRCC | 2 cut(s) | 6, 1796 |
| AccII | CGCG | 1 cut(s) | 2231 |
| AciI | CCGC | 9 cut(s) | 183, 393, 641, 1234, 2056, 2264, 2475, 3036, 3142 |
| AclWI | GGATC | 4 cut(s) | 122, 165, 2744, 3173 |
| AcoI | YGGCCR | 4 cut(s) | 204, 211, 904, 2720 |
| AcsI | RAATTY | 8 cut(s) | 323, 378, 984, 1186, 1227, 1418, 2184, 2501 |
| AcuI | CTGAAG | 8 cut(s) | 144, 182, 588, 1366, 1769, 1883, 1916, 3342 |
| AcyI | GRCGYC | 1 cut(s) | 1411 |
| AfaI | GTAC | 8 cut(s) | 388, 612, 949, 1387, 1578, 2128, 2143, 2578 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 472, 693, 913, 1305, 2724, 2987, 3412 |
| AflIII | ACRYGT | 3 cut(s) | 670, 721, 3482 |
| AgeI | ACCGGT | 1 cut(s) | 2214 |
| AjnI | CCWGG | 1 cut(s) | 2717 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 75, 107, 935, 967 |
| AleI | CACNNNNGTG | 1 cut(s) | 2594 |
| Alw21I | GWGCWC | 2 cut(s) | 795, 849 |
| Alw26I | GTCTC | 4 cut(s) | 679, 1166, 2138, 3074 |
| AlwI | GGATC | 4 cut(s) | 122, 165, 2744, 3173 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1779, 3632 |
| Ama87I | CYCGRG | 1 cut(s) | 1685 |
| ApeKI | GCWGC | 6 cut(s) | 1566, 1638, 3088, 3626, 3629, 3632 |
| ApoI | RAATTY | 8 cut(s) | 323, 378, 984, 1186, 1227, 1418, 2184, 2501 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 770, 802 |
| AseI | ATTAAT | 1 cut(s) | 3330 |
| AsiGI | ACCGGT | 1 cut(s) | 2214 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 102, 516, 2446 |
| AspLEI | GCGC | 2 cut(s) | 2730, 3011 |
| AspS9I | GGNCC | 5 cut(s) | 643, 683, 2738, 2990, 3292 |
| AsuC2I | CCSGG | 2 cut(s) | 687, 3338 |
| AsuHPI | GGTGA | 7 cut(s) | 348, 487, 2204, 2539, 2794, 3211, 3395 |
| AsuII | TTCGAA | 2 cut(s) | 1595, 2315 |
| AvaI | CYCGRG | 1 cut(s) | 1685 |
| AvaII | GGWCC | 2 cut(s) | 643, 683 |
| BalI | TGGCCA | 1 cut(s) | 2722 |
| BanI | GGYRCC | 2 cut(s) | 6, 1796 |
| BanII | GRGCYC | 2 cut(s) | 795, 849 |
| BbsI | GAAGAC | 1 cut(s) | 2628 |
| Bbv12I | GWGCWC | 2 cut(s) | 795, 849 |
| BbvI | GCAGC | 6 cut(s) | 1578, 1625, 3075, 3616, 3619, 3638 |
| BccI | CCATC | 7 cut(s) | 1007, 1068, 1100, 1490, 1787, 3179, 3467 |
| BceAI | ACGGC | 9 cut(s) | 198, 219, 226, 554, 891, 1110, 1784, 2965, 3215 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1585, 1619, 3604, 3638 |
| BciT130I | CCWGG | 1 cut(s) | 2719 |
| BciVI | GTATCC | 1 cut(s) | 3219 |
| BclI | TGATCA | 3 cut(s) | 1027, 1531, 2886 |
| BcnI | CCSGG | 2 cut(s) | 687, 3338 |
| BcoDI | GTCTC | 4 cut(s) | 679, 1166, 2138, 3074 |
| BfaI | CTAG | 6 cut(s) | 887, 1544, 2376, 2631, 2760, 3153 |
| BfmI | CTRYAG | 3 cut(s) | 171, 1125, 3670 |
| BfuAI | ACCTGC | 1 cut(s) | 3041 |
| BfuI | GTATCC | 1 cut(s) | 3219 |
| BglII | AGATCT | 1 cut(s) | 526 |
| Bme1390I | CCNGG | 3 cut(s) | 687, 2719, 3338 |
| Bme18I | GGWCC | 2 cut(s) | 643, 683 |
| BmeT110I | CYCGRG | 1 cut(s) | 1685 |
| BmgT120I | GGNCC | 5 cut(s) | 643, 683, 2738, 2990, 3292 |
| BmiI | GGNNCC | 6 cut(s) | 8, 574, 685, 1798, 2992, 3293 |
| BmrFI | CCNGG | 3 cut(s) | 687, 2719, 3338 |
| BmrI | ACTGGG | 1 cut(s) | 2343 |
| BmsI | GCATC | 9 cut(s) | 628, 1185, 1279, 2310, 2394, 2650, 2780, 3314, 3559 |
| BmuI | ACTGGG | 1 cut(s) | 2343 |
| BpiI | GAAGAC | 1 cut(s) | 2628 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1304 |
| Bpu14I | TTCGAA | 2 cut(s) | 1595, 2315 |
| BpuEI | CTTGAG | 2 cut(s) | 51, 1409 |
| BpuMI | CCSGG | 2 cut(s) | 687, 3338 |
| BsaAI | YACGTR | 1 cut(s) | 1022 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1530 |
| BsaHI | GRCGYC | 1 cut(s) | 1411 |
| BsaJI | CCNNGG | 7 cut(s) | 201, 576, 1470, 1699, 2723, 2957, 3457 |
| BsaWI | WCCGGW | 1 cut(s) | 2214 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 472, 693, 913, 1305, 2724, 2987, 3412 |
| Bse118I | RCCGGY | 1 cut(s) | 2214 |
| Bse1I | ACTGG | 7 cut(s) | 1453, 1998, 2130, 2143, 2338, 2992, 3608 |
| Bse3DI | GCAATG | 3 cut(s) | 1918, 2400, 3622 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1530 |
| BseBI | CCWGG | 1 cut(s) | 2719 |
| BseDI | CCNNGG | 7 cut(s) | 201, 576, 1470, 1699, 2723, 2957, 3457 |
| BseGI | GGATG | 8 cut(s) | 1079, 1111, 1200, 1501, 2245, 2869, 2920, 3574 |
| BseJI | GATNNNNATC | 1 cut(s) | 1530 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 472, 693, 913, 1305, 2724, 2987, 3412 |
| BseMI | GCAATG | 3 cut(s) | 1918, 2400, 3622 |
| BseMII | CTCAG | 7 cut(s) | 309, 1786, 1894, 1907, 2733, 2838, 3175 |
| BseNI | ACTGG | 7 cut(s) | 1453, 1998, 2130, 2143, 2338, 2992, 3608 |
| BseRI | GAGGAG | 2 cut(s) | 493, 3389 |
| BseX3I | CGGCCG | 2 cut(s) | 204, 211 |
| BseXI | GCAGC | 6 cut(s) | 1578, 1625, 3075, 3616, 3619, 3638 |
| BseYI | CCCAGC | 1 cut(s) | 2367 |
| BsgI | GTGCAG | 2 cut(s) | 1969, 1974 |
| Bsh1236I | CGCG | 1 cut(s) | 2231 |
| Bsh1285I | CGRYCG | 2 cut(s) | 207, 214 |
| BshNI | GGYRCC | 2 cut(s) | 6, 1796 |
| BshTI | ACCGGT | 1 cut(s) | 2214 |
| BsiEI | CGRYCG | 2 cut(s) | 207, 214 |
| BsiHKAI | GWGCWC | 2 cut(s) | 795, 849 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1685 |
| BsiSI | CCGG | 3 cut(s) | 687, 2215, 3337 |
| BslFI | GGGAC | 5 cut(s) | 260, 270, 669, 810, 2600 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 472, 693, 913, 1305, 2724, 2987, 3412 |
| BsmAI | GTCTC | 4 cut(s) | 679, 1166, 2138, 3074 |
| BsmFI | GGGAC | 5 cut(s) | 260, 270, 669, 810, 2600 |
| BsmI | GAATGC | 1 cut(s) | 2057 |
| BsoBI | CYCGRG | 1 cut(s) | 1685 |
| Bsp119I | TTCGAA | 2 cut(s) | 1595, 2315 |
| Bsp1286I | GDGCHC | 2 cut(s) | 795, 849 |
| Bsp19I | CCATGG | 2 cut(s) | 2723, 2957 |
| Bsp68I | TCGCGA | 1 cut(s) | 2231 |
| BspACI | CCGC | 9 cut(s) | 183, 393, 641, 1234, 2056, 2264, 2475, 3036, 3142 |
| BspCNI | CTCAG | 7 cut(s) | 308, 1785, 1893, 1906, 2734, 2839, 3174 |
| BspFNI | CGCG | 1 cut(s) | 2231 |
| BspHI | TCATGA | 1 cut(s) | 988 |
| BspLI | GGNNCC | 6 cut(s) | 8, 574, 685, 1798, 2992, 3293 |
| BspMAI | CTGCAG | 1 cut(s) | 175 |
| BspMI | ACCTGC | 1 cut(s) | 3041 |
| BspPI | GGATC | 4 cut(s) | 122, 165, 2744, 3173 |
| BspT104I | TTCGAA | 2 cut(s) | 1595, 2315 |
| BspT107I | GGYRCC | 2 cut(s) | 6, 1796 |
| BsrDI | GCAATG | 3 cut(s) | 1918, 2400, 3622 |
| BsrFI | RCCGGY | 1 cut(s) | 2214 |
| BsrI | ACTGG | 7 cut(s) | 1453, 1998, 2130, 2143, 2338, 2992, 3608 |
| BssAI | RCCGGY | 1 cut(s) | 2214 |
| BssECI | CCNNGG | 7 cut(s) | 201, 576, 1470, 1699, 2723, 2957, 3457 |
| BssNI | GRCGYC | 1 cut(s) | 1411 |
| BssT1I | CCWWGG | 5 cut(s) | 576, 1470, 2723, 2957, 3457 |
| Bst2UI | CCWGG | 1 cut(s) | 2719 |
| Bst4CI | ACNGT | 6 cut(s) | 1300, 1958, 2407, 2627, 2806, 3515 |
| Bst6I | CTCTTC | 3 cut(s) | 465, 1216, 3501 |
| BstACI | GRCGYC | 1 cut(s) | 1411 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 3198, 3632 |
| BstBAI | YACGTR | 1 cut(s) | 1022 |
| BstBI | TTCGAA | 2 cut(s) | 1595, 2315 |
| BstC8I | GCNNGC | 7 cut(s) | 317, 414, 807, 849, 1236, 2788, 3124 |
| BstDSI | CCRYGG | 3 cut(s) | 201, 2723, 2957 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 470 |
| BstF5I | GGATG | 8 cut(s) | 1079, 1111, 1200, 1501, 2245, 2869, 2920, 3574 |
| BstFNI | CGCG | 1 cut(s) | 2231 |
| BstHHI | GCGC | 2 cut(s) | 2730, 3011 |
| BstMAI | GTCTC | 4 cut(s) | 679, 1166, 2138, 3074 |
| BstMCI | CGRYCG | 2 cut(s) | 207, 214 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 1520, 2228, 2399, 2736, 2783, 3198, 3250, 3632 |
| BstNI | CCWGG | 1 cut(s) | 2719 |
| BstNSI | RCATGY | 6 cut(s) | 319, 674, 725, 809, 3201, 3486 |
| BstSCI | CCNGG | 3 cut(s) | 685, 2717, 3336 |
| BstSFI | CTRYAG | 3 cut(s) | 171, 1125, 3670 |
| BstUI | CGCG | 1 cut(s) | 2231 |
| BstV1I | GCAGC | 6 cut(s) | 1578, 1625, 3075, 3616, 3619, 3638 |
| BstV2I | GAAGAC | 1 cut(s) | 2628 |
| BstX2I | RGATCY | 4 cut(s) | 127, 157, 526, 3165 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2718 |
| BstYI | RGATCY | 4 cut(s) | 127, 157, 526, 3165 |
| BstZI | CGGCCG | 2 cut(s) | 204, 211 |
| BsuI | GTATCC | 1 cut(s) | 3219 |
| BtgI | CCRYGG | 3 cut(s) | 201, 2723, 2957 |
| BtsCI | GGATG | 8 cut(s) | 1079, 1111, 1200, 1501, 2245, 2869, 2920, 3574 |
| BtsI | GCAGTG | 4 cut(s) | 152, 565, 1986, 3654 |
| BtsIMutI | CAGTG | 8 cut(s) | 152, 565, 1888, 1986, 1991, 2136, 2655, 3654 |
| BtuMI | TCGCGA | 1 cut(s) | 2231 |
| BveI | ACCTGC | 1 cut(s) | 3041 |
| Cac8I | GCNNGC | 7 cut(s) | 317, 414, 807, 849, 1236, 2788, 3124 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1779, 3632 |
| CciI | TCATGA | 1 cut(s) | 988 |
| CfoI | GCGC | 2 cut(s) | 2730, 3011 |
| Cfr10I | RCCGGY | 1 cut(s) | 2214 |
| Cfr13I | GGNCC | 5 cut(s) | 643, 683, 2738, 2990, 3292 |
| CseI | GACGC | 1 cut(s) | 1400 |
| Csp6I | GTAC | 8 cut(s) | 387, 611, 948, 1386, 1577, 2127, 2142, 2577 |
| CspAI | ACCGGT | 1 cut(s) | 2214 |
| CviQI | GTAC | 8 cut(s) | 387, 611, 948, 1386, 1577, 2127, 2142, 2577 |
| EaeI | YGGCCR | 4 cut(s) | 204, 211, 904, 2720 |
| EagI | CGGCCG | 2 cut(s) | 204, 211 |
| Eam1104I | CTCTTC | 3 cut(s) | 465, 1216, 3501 |
| EarI | CTCTTC | 3 cut(s) | 465, 1216, 3501 |
| Ecl136II | GAGCTC | 2 cut(s) | 793, 847 |
| EclXI | CGGCCG | 2 cut(s) | 204, 211 |
| Eco130I | CCWWGG | 5 cut(s) | 576, 1470, 2723, 2957, 3457 |
| Eco147I | AGGCCT | 2 cut(s) | 1338, 2717 |
| Eco24I | GRGCYC | 2 cut(s) | 795, 849 |
| Eco32I | GATATC | 1 cut(s) | 666 |
| Eco47I | GGWCC | 2 cut(s) | 643, 683 |
| Eco52I | CGGCCG | 2 cut(s) | 204, 211 |
| Eco53kI | GAGCTC | 2 cut(s) | 793, 847 |
| Eco57I | CTGAAG | 8 cut(s) | 144, 182, 588, 1366, 1769, 1883, 1916, 3342 |
| Eco88I | CYCGRG | 1 cut(s) | 1685 |
| EcoICRI | GAGCTC | 2 cut(s) | 793, 847 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 470 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2738 |
| EcoRI | GAATTC | 1 cut(s) | 323 |
| EcoRII | CCWGG | 1 cut(s) | 2717 |
| EcoRV | GATATC | 1 cut(s) | 666 |
| EcoT14I | CCWWGG | 5 cut(s) | 576, 1470, 2723, 2957, 3457 |
| EcoT22I | ATGCAT | 2 cut(s) | 1200, 2176 |
| EcoT38I | GRGCYC | 2 cut(s) | 795, 849 |
| ErhI | CCWWGG | 5 cut(s) | 576, 1470, 2723, 2957, 3457 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 501, 533, 2415, 2447, 3557, 3589 |
| FaqI | GGGAC | 5 cut(s) | 260, 270, 669, 810, 2600 |
| FauI | CCCGC | 1 cut(s) | 1227 |
| FauNDI | CATATG | 2 cut(s) | 938, 2115 |
| FbaI | TGATCA | 3 cut(s) | 1027, 1531, 2886 |
| FokI | GGATG | 8 cut(s) | 1086, 1118, 1207, 1508, 2252, 2876, 2927, 3581 |
| FriOI | GRGCYC | 2 cut(s) | 795, 849 |
| FspAI | RTGCGCAY | 1 cut(s) | 3010 |
| FspBI | CTAG | 6 cut(s) | 887, 1544, 2376, 2631, 2760, 3153 |
| FspI | TGCGCA | 1 cut(s) | 3010 |
| GlaI | GCGC | 2 cut(s) | 2729, 3010 |
| GsaI | CCCAGC | 1 cut(s) | 2371 |
| HapII | CCGG | 3 cut(s) | 687, 2215, 3337 |
| HgaI | GACGC | 1 cut(s) | 1400 |
| HhaI | GCGC | 2 cut(s) | 2730, 3011 |
| Hin1I | GRCGYC | 1 cut(s) | 1411 |
| Hin6I | GCGC | 2 cut(s) | 2728, 3009 |
| HinP1I | GCGC | 2 cut(s) | 2728, 3009 |
| HincII | GTYRAC | 3 cut(s) | 58, 1446, 2985 |
| HindII | GTYRAC | 3 cut(s) | 58, 1446, 2985 |
| HindIII | AAGCTT | 3 cut(s) | 783, 1378, 3589 |
| HpaII | CCGG | 3 cut(s) | 687, 2215, 3337 |
| HphI | GGTGA | 7 cut(s) | 348, 487, 2204, 2539, 2794, 3211, 3395 |
| Hpy166II | GTNNAC | 7 cut(s) | 58, 356, 1082, 1446, 2127, 2530, 2985 |
| Hpy8I | GTNNAC | 7 cut(s) | 58, 356, 1082, 1446, 2127, 2530, 2985 |
| Hpy99I | CGWCG | 6 cut(s) | 56, 212, 833, 2231, 2327, 2861 |
| HpyCH4III | ACNGT | 6 cut(s) | 1300, 1958, 2407, 2627, 2806, 3515 |
| HpyCH4IV | ACGT | 8 cut(s) | 54, 1021, 1264, 1909, 2226, 2688, 2813, 3040 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 1520, 2228, 2399, 2736, 2783, 3198, 3250, 3632 |
| HpySE526I | ACGT | 8 cut(s) | 54, 1021, 1264, 1909, 2226, 2688, 2813, 3040 |
| Hsp92I | GRCGYC | 1 cut(s) | 1411 |
| HspAI | GCGC | 2 cut(s) | 2728, 3009 |
| Ksp22I | TGATCA | 3 cut(s) | 1027, 1531, 2886 |
| LmnI | GCTCC | 5 cut(s) | 798, 2495, 3302, 3340, 3644 |
| Lsp1109I | GCAGC | 6 cut(s) | 1578, 1625, 3075, 3616, 3619, 3638 |
| LweI | GCATC | 9 cut(s) | 628, 1185, 1279, 2310, 2394, 2650, 2780, 3314, 3559 |
| MaeI | CTAG | 6 cut(s) | 887, 1544, 2376, 2631, 2760, 3153 |
| MaeII | ACGT | 8 cut(s) | 54, 1021, 1264, 1909, 2226, 2688, 2813, 3040 |
| MaeIII | GTNAC | 9 cut(s) | 461, 482, 1090, 2407, 2596, 3020, 3115, 3217, 3687 |
| MfeI | CAATTG | 1 cut(s) | 3239 |
| MflI | RGATCY | 4 cut(s) | 127, 157, 526, 3165 |
| MhlI | GDGCHC | 2 cut(s) | 795, 849 |
| MlsI | TGGCCA | 1 cut(s) | 2722 |
| MluNI | TGGCCA | 1 cut(s) | 2722 |
| MlyI | GAGTC | 2 cut(s) | 1828, 2918 |
| MmeI | TCCRAC | 5 cut(s) | 280, 2031, 2880, 2892, 3622 |
| Mox20I | TGGCCA | 1 cut(s) | 2722 |
| Mph1103I | ATGCAT | 2 cut(s) | 1200, 2176 |
| MroXI | GAANNNNTTC | 3 cut(s) | 102, 516, 2446 |
| MscI | TGGCCA | 1 cut(s) | 2722 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2594, 3018 |
| Msp20I | TGGCCA | 1 cut(s) | 2722 |
| MspA1I | CMGCKG | 1 cut(s) | 3629 |
| MspI | CCGG | 3 cut(s) | 687, 2215, 3337 |
| MspR9I | CCNGG | 3 cut(s) | 687, 2719, 3338 |
| MunI | CAATTG | 1 cut(s) | 3239 |
| Mva1269I | GAATGC | 1 cut(s) | 2057 |
| MvaI | CCWGG | 1 cut(s) | 2719 |
| MvnI | CGCG | 1 cut(s) | 2231 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 1520, 2228, 2399, 2736, 2783, 3198, 3250, 3632 |
| NciI | CCSGG | 2 cut(s) | 687, 3338 |
| NcoI | CCATGG | 2 cut(s) | 2723, 2957 |
| NdeI | CATATG | 2 cut(s) | 938, 2115 |
| NlaIV | GGNNCC | 6 cut(s) | 8, 574, 685, 1798, 2992, 3293 |
| NmuCI | GTSAC | 5 cut(s) | 1090, 2596, 3020, 3217, 3687 |
| NruI | TCGCGA | 1 cut(s) | 2231 |
| NsbI | TGCGCA | 1 cut(s) | 3010 |
| NsiI | ATGCAT | 2 cut(s) | 1200, 2176 |
| NspI | RCATGY | 6 cut(s) | 319, 674, 725, 809, 3201, 3486 |
| NspV | TTCGAA | 2 cut(s) | 1595, 2315 |
| OliI | CACNNNNGTG | 1 cut(s) | 2594 |
| PaeI | GCATGC | 2 cut(s) | 319, 809 |
| PaeR7I | CTCGAG | 1 cut(s) | 1685 |
| PagI | TCATGA | 1 cut(s) | 988 |
| PceI | AGGCCT | 2 cut(s) | 1338, 2717 |
| PciI | ACATGT | 3 cut(s) | 670, 721, 3482 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2802 |
| PctI | GAATGC | 1 cut(s) | 2057 |
| PdmI | GAANNNNTTC | 3 cut(s) | 102, 516, 2446 |
| PfoI | TCCNGGA | 1 cut(s) | 685 |
| PinAI | ACCGGT | 1 cut(s) | 2214 |
| PleI | GAGTC | 2 cut(s) | 1827, 2917 |
| PpsI | GAGTC | 2 cut(s) | 1827, 2917 |
| Ppu21I | YACGTR | 1 cut(s) | 1022 |
| PscI | ACATGT | 3 cut(s) | 670, 721, 3482 |
| PshBI | ATTAAT | 1 cut(s) | 3330 |
| PsiI | TTATAA | 2 cut(s) | 704, 3066 |
| Psp124BI | GAGCTC | 2 cut(s) | 795, 849 |
| Psp6I | CCWGG | 1 cut(s) | 2717 |
| PspFI | CCCAGC | 1 cut(s) | 2367 |
| PspGI | CCWGG | 1 cut(s) | 2717 |
| PspN4I | GGNNCC | 6 cut(s) | 8, 574, 685, 1798, 2992, 3293 |
| PspPI | GGNCC | 5 cut(s) | 643, 683, 2738, 2990, 3292 |
| PstI | CTGCAG | 1 cut(s) | 175 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1779, 3632 |
| PsuI | RGATCY | 4 cut(s) | 127, 157, 526, 3165 |
| PvuII | CAGCTG | 1 cut(s) | 3629 |
| RruI | TCGCGA | 1 cut(s) | 2231 |
| RsaI | GTAC | 8 cut(s) | 388, 612, 949, 1387, 1578, 2128, 2143, 2578 |
| RsaNI | GTAC | 8 cut(s) | 387, 611, 948, 1386, 1577, 2127, 2142, 2577 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2594, 3018 |
| SacI | GAGCTC | 2 cut(s) | 795, 849 |
| Sau96I | GGNCC | 5 cut(s) | 643, 683, 2738, 2990, 3292 |
| SchI | GAGTC | 2 cut(s) | 1828, 2918 |
| ScrFI | CCNGG | 3 cut(s) | 687, 2719, 3338 |
| SduI | GDGCHC | 2 cut(s) | 795, 849 |
| SfaNI | GCATC | 9 cut(s) | 628, 1185, 1279, 2310, 2394, 2650, 2780, 3314, 3559 |
| SfcI | CTRYAG | 3 cut(s) | 171, 1125, 3670 |
| Sfr274I | CTCGAG | 1 cut(s) | 1685 |
| SfuI | TTCGAA | 2 cut(s) | 1595, 2315 |
| SinI | GGWCC | 2 cut(s) | 643, 683 |
| SlaI | CTCGAG | 1 cut(s) | 1685 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2594, 3018 |
| SmlI | CTYRAG | 3 cut(s) | 66, 1424, 1685 |
| SmoI | CTYRAG | 3 cut(s) | 66, 1424, 1685 |
| SphI | GCATGC | 2 cut(s) | 319, 809 |
| SseBI | AGGCCT | 2 cut(s) | 1338, 2717 |
| SsiI | CCGC | 9 cut(s) | 183, 393, 641, 1234, 2056, 2264, 2475, 3036, 3142 |
| SspI | AATATT | 4 cut(s) | 45, 970, 1101, 2446 |
| SspMI | CTAG | 6 cut(s) | 887, 1544, 2376, 2631, 2760, 3153 |
| SstI | GAGCTC | 2 cut(s) | 795, 849 |
| StuI | AGGCCT | 2 cut(s) | 1338, 2717 |
| StyD4I | CCNGG | 3 cut(s) | 685, 2717, 3336 |
| StyI | CCWWGG | 5 cut(s) | 576, 1470, 2723, 2957, 3457 |
| TaaI | ACNGT | 6 cut(s) | 1300, 1958, 2407, 2627, 2806, 3515 |
| TaiI | ACGT | 8 cut(s) | 57, 1024, 1267, 1912, 2229, 2691, 2816, 3043 |
| TatI | WGTACW | 2 cut(s) | 947, 1385 |
| TauI | GCSGC | 5 cut(s) | 186, 2058, 2266, 2478, 3144 |
| TscAI | CASTG | 8 cut(s) | 152, 565, 1888, 1993, 1998, 2143, 2662, 3654 |
| TseFI | GTSAC | 5 cut(s) | 1090, 2596, 3020, 3217, 3687 |
| TseI | GCWGC | 6 cut(s) | 1566, 1638, 3088, 3626, 3629, 3632 |
| Tsp45I | GTSAC | 5 cut(s) | 1090, 2596, 3020, 3217, 3687 |
| TspDTI | ATGAA | 9 cut(s) | 129, 620, 732, 977, 1005, 2102, 2256, 2411, 2436 |
| TspGWI | ACGGA | 1 cut(s) | 3592 |
| TspRI | CASTG | 8 cut(s) | 152, 565, 1888, 1993, 1998, 2143, 2662, 3654 |
| VpaK11BI | GGWCC | 2 cut(s) | 643, 683 |
| VspI | ATTAAT | 1 cut(s) | 3330 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 470 |
| XapI | RAATTY | 8 cut(s) | 323, 378, 984, 1186, 1227, 1418, 2184, 2501 |
| XceI | RCATGY | 6 cut(s) | 319, 674, 725, 809, 3201, 3486 |
| XhoI | CTCGAG | 1 cut(s) | 1685 |
| XmnI | GAANNNNTTC | 3 cut(s) | 102, 516, 2446 |
| XspI | CTAG | 6 cut(s) | 887, 1544, 2376, 2631, 2760, 3153 |
| Zsp2I | ATGCAT | 2 cut(s) | 1200, 2176 |