TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 1 - 93 | 1.8e-12 | TIR domain |
| NB-ARC | PF00931 | 116 - 286 | 8.5e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 354 - 422 | 6.8e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 627 - 692 | 1.1e-07 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 679 - 756 | 9.5e-06 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 465 |
| Acc16I | TGCGCA | 1 cut(s) | 3336 |
| AccB1I | GGYRCC | 1 cut(s) | 1188 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1760 |
| AccI | GTMKAC | 2 cut(s) | 54, 2164 |
| AccII | CGCG | 2 cut(s) | 516, 3084 |
| AciI | CCGC | 3 cut(s) | 2435, 2475, 2683 |
| AclWI | GGATC | 7 cut(s) | 626, 2148, 2912, 2974, 2996, 3314, 3515 |
| AcoI | YGGCCR | 1 cut(s) | 214 |
| AcuI | CTGAAG | 2 cut(s) | 1032, 1284 |
| AcyI | GRCGYC | 1 cut(s) | 3612 |
| AfaI | GTAC | 8 cut(s) | 657, 1408, 1478, 1602, 2674, 2709, 3283, 3453 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1243, 1760, 2400, 3466 |
| AflII | CTTAAG | 1 cut(s) | 1876 |
| AflIII | ACRYGT | 1 cut(s) | 1481 |
| AjnI | CCWGG | 4 cut(s) | 730, 1273, 1822, 2368 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 703, 735 |
| AleI | CACNNNNGTG | 2 cut(s) | 2363, 2825 |
| Alw21I | GWGCWC | 2 cut(s) | 834, 3263 |
| Alw26I | GTCTC | 3 cut(s) | 2707, 3360, 3570 |
| AlwI | GGATC | 7 cut(s) | 626, 2148, 2912, 2974, 2996, 3314, 3515 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2102 |
| Ama87I | CYCGRG | 2 cut(s) | 20, 827 |
| AoxI | GGCC | 5 cut(s) | 214, 1546, 2685, 3328, 3376 |
| ApeKI | GCWGC | 3 cut(s) | 200, 295, 449 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1535, 1567 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 99, 1020, 1258, 1269 |
| AspLEI | GCGC | 3 cut(s) | 1810, 3248, 3337 |
| AspS9I | GGNCC | 4 cut(s) | 688, 728, 2685, 3470 |
| AsuHPI | GGTGA | 5 cut(s) | 1271, 1671, 2016, 2350, 2999 |
| AsuII | TTCGAA | 1 cut(s) | 852 |
| AvaI | CYCGRG | 2 cut(s) | 20, 827 |
| AvaII | GGWCC | 3 cut(s) | 688, 728, 3470 |
| AxyI | CCTNAGG | 2 cut(s) | 1896, 2103 |
| BalI | TGGCCA | 1 cut(s) | 216 |
| BanI | GGYRCC | 1 cut(s) | 1188 |
| BanII | GRGCYC | 1 cut(s) | 834 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1701, 1733 |
| BauI | CACGAG | 1 cut(s) | 1991 |
| BbsI | GAAGAC | 5 cut(s) | 3120, 3138, 3156, 3186, 3210 |
| Bbv12I | GWGCWC | 2 cut(s) | 834, 3263 |
| BbvI | GCAGC | 3 cut(s) | 187, 282, 436 |
| BceAI | ACGGC | 3 cut(s) | 1561, 2590, 3363 |
| BciT130I | CCWGG | 4 cut(s) | 732, 1275, 1824, 2370 |
| BclI | TGATCA | 3 cut(s) | 1555, 3313, 3571 |
| BcoDI | GTCTC | 3 cut(s) | 2707, 3360, 3570 |
| BfaI | CTAG | 4 cut(s) | 89, 1373, 2172, 3296 |
| BfmI | CTRYAG | 4 cut(s) | 1575, 1971, 2456, 3372 |
| BfrI | CTTAAG | 1 cut(s) | 1876 |
| BisI | GCNGC | 3 cut(s) | 201, 296, 450 |
| BlsI | GCNGC | 3 cut(s) | 202, 297, 451 |
| BmcAI | AGTACT | 1 cut(s) | 3453 |
| Bme1390I | CCNGG | 4 cut(s) | 732, 1275, 1824, 2370 |
| Bme18I | GGWCC | 3 cut(s) | 688, 728, 3470 |
| BmeT110I | CYCGRG | 2 cut(s) | 20, 827 |
| BmgT120I | GGNCC | 4 cut(s) | 688, 728, 2685, 3470 |
| BmiI | GGNNCC | 6 cut(s) | 1190, 1348, 1618, 1697, 1988, 3471 |
| BmrFI | CCNGG | 4 cut(s) | 732, 1275, 1824, 2370 |
| BmrI | ACTGGG | 4 cut(s) | 2853, 3000, 3443, 3503 |
| BmsI | GCATC | 5 cut(s) | 129, 1795, 2430, 2460, 2990 |
| BmuI | ACTGGG | 4 cut(s) | 2853, 3000, 3443, 3503 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2755 |
| BpiI | GAAGAC | 5 cut(s) | 3120, 3138, 3156, 3186, 3210 |
| BplI | GAGNNNNNCTC | 3 cut(s) | 35, 172, 204 |
| BpmI | CTGGAG | 1 cut(s) | 1430 |
| Bpu10I | CCTNAGC | 1 cut(s) | 156 |
| Bpu14I | TTCGAA | 1 cut(s) | 852 |
| BpuEI | CTTGAG | 3 cut(s) | 180, 1568, 1649 |
| Bsa29I | ATCGAT | 1 cut(s) | 669 |
| BsaAI | YACGTR | 2 cut(s) | 527, 2276 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2922, 3318 |
| BsaHI | GRCGYC | 1 cut(s) | 3612 |
| BsaJI | CCNNGG | 2 cut(s) | 2127, 2394 |
| BsaWI | WCCGGW | 2 cut(s) | 1349, 1681 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1243, 1760, 2400, 3466 |
| Bse1I | ACTGG | 8 cut(s) | 487, 1572, 1662, 2522, 2848, 3006, 3449, 3509 |
| Bse21I | CCTNAGG | 2 cut(s) | 1896, 2103 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2922, 3318 |
| BseBI | CCWGG | 4 cut(s) | 732, 1275, 1824, 2370 |
| BseCI | ATCGAT | 1 cut(s) | 669 |
| BseDI | CCNNGG | 2 cut(s) | 2127, 2394 |
| BseGI | GGATG | 9 cut(s) | 120, 429, 1148, 1750, 1754, 2451, 2468, 2923, 2980 |
| BseJI | GATNNNNATC | 2 cut(s) | 2922, 3318 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1243, 1760, 2400, 3466 |
| BseNI | ACTGG | 8 cut(s) | 487, 1572, 1662, 2522, 2848, 3006, 3449, 3509 |
| BseRI | GAGGAG | 1 cut(s) | 2461 |
| BseXI | GCAGC | 3 cut(s) | 187, 282, 436 |
| BsgI | GTGCAG | 4 cut(s) | 507, 801, 2115, 2266 |
| Bsh1236I | CGCG | 2 cut(s) | 516, 3084 |
| BshFI | GGCC | 5 cut(s) | 216, 1548, 2687, 3330, 3378 |
| BshNI | GGYRCC | 1 cut(s) | 1188 |
| BshVI | ATCGAT | 1 cut(s) | 669 |
| BsiHKAI | GWGCWC | 2 cut(s) | 834, 3263 |
| BsiHKCI | CYCGRG | 2 cut(s) | 20, 827 |
| BsiSI | CCGG | 2 cut(s) | 1350, 1682 |
| BslFI | GGGAC | 3 cut(s) | 2763, 2801, 2876 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1243, 1760, 2400, 3466 |
| BsmAI | GTCTC | 3 cut(s) | 2707, 3360, 3570 |
| BsmFI | GGGAC | 3 cut(s) | 2763, 2801, 2876 |
| BsmI | GAATGC | 2 cut(s) | 351, 2896 |
| BsnI | GGCC | 5 cut(s) | 216, 1548, 2687, 3330, 3378 |
| BsoBI | CYCGRG | 2 cut(s) | 20, 827 |
| Bsp119I | TTCGAA | 1 cut(s) | 852 |
| Bsp1286I | GDGCHC | 2 cut(s) | 834, 3263 |
| Bsp19I | CCATGG | 1 cut(s) | 2394 |
| Bsp68I | TCGCGA | 1 cut(s) | 516 |
| BspACI | CCGC | 3 cut(s) | 2435, 2475, 2683 |
| BspANI | GGCC | 5 cut(s) | 216, 1548, 2687, 3330, 3378 |
| BspDI | ATCGAT | 1 cut(s) | 669 |
| BspFNI | CGCG | 2 cut(s) | 516, 3084 |
| BspHI | TCATGA | 2 cut(s) | 715, 3316 |
| BspLI | GGNNCC | 6 cut(s) | 1190, 1348, 1618, 1697, 1988, 3471 |
| BspMAI | CTGCAG | 2 cut(s) | 2460, 3376 |
| BspPI | GGATC | 7 cut(s) | 626, 2148, 2912, 2974, 2996, 3314, 3515 |
| BspQI | GCTCTTC | 1 cut(s) | 3216 |
| BspT104I | TTCGAA | 1 cut(s) | 852 |
| BspT107I | GGYRCC | 1 cut(s) | 1188 |
| BspTI | CTTAAG | 1 cut(s) | 1876 |
| BsrI | ACTGG | 8 cut(s) | 487, 1572, 1662, 2522, 2848, 3006, 3449, 3509 |
| BssECI | CCNNGG | 2 cut(s) | 2127, 2394 |
| BssNI | GRCGYC | 1 cut(s) | 3612 |
| BssSI | CACGAG | 1 cut(s) | 1991 |
| BssT1I | CCWWGG | 2 cut(s) | 2127, 2394 |
| Bst2BI | CACGAG | 1 cut(s) | 1991 |
| Bst2UI | CCWGG | 4 cut(s) | 732, 1275, 1824, 2370 |
| Bst4CI | ACNGT | 7 cut(s) | 605, 911, 1188, 1201, 1400, 2720, 3456 |
| Bst6I | CTCTTC | 3 cut(s) | 123, 2024, 3216 |
| BstACI | GRCGYC | 1 cut(s) | 3612 |
| BstAFI | CTTAAG | 1 cut(s) | 1876 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1231 |
| BstBAI | YACGTR | 2 cut(s) | 527, 2276 |
| BstBI | TTCGAA | 1 cut(s) | 852 |
| BstC8I | GCNNGC | 4 cut(s) | 780, 846, 2685, 3376 |
| BstDSI | CCRYGG | 1 cut(s) | 2394 |
| BstEII | GGTNACC | 1 cut(s) | 1277 |
| BstF5I | GGATG | 9 cut(s) | 120, 429, 1148, 1750, 1754, 2451, 2468, 2923, 2980 |
| BstFNI | CGCG | 2 cut(s) | 516, 3084 |
| BstHHI | GCGC | 3 cut(s) | 1810, 3248, 3337 |
| BstMAI | GTCTC | 3 cut(s) | 2707, 3360, 3570 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 455, 1231, 2893, 3397 |
| BstNI | CCWGG | 4 cut(s) | 732, 1275, 1824, 2370 |
| BstNSI | RCATGY | 3 cut(s) | 848, 1485, 3252 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2755 |
| BstPI | GGTNACC | 1 cut(s) | 1277 |
| BstSCI | CCNGG | 4 cut(s) | 730, 1273, 1822, 2368 |
| BstSFI | CTRYAG | 4 cut(s) | 1575, 1971, 2456, 3372 |
| BstUI | CGCG | 2 cut(s) | 516, 3084 |
| BstV1I | GCAGC | 3 cut(s) | 187, 282, 436 |
| BstV2I | GAAGAC | 5 cut(s) | 3120, 3138, 3156, 3186, 3210 |
| BstX2I | RGATCY | 1 cut(s) | 2140 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1498 |
| BstYI | RGATCY | 1 cut(s) | 2140 |
| Bsu15I | ATCGAT | 1 cut(s) | 669 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1896, 2103 |
| BsuRI | GGCC | 5 cut(s) | 216, 1548, 2687, 3330, 3378 |
| BsuTUI | ATCGAT | 1 cut(s) | 669 |
| BtgI | CCRYGG | 1 cut(s) | 2394 |
| BtgZI | GCGATG | 1 cut(s) | 1818 |
| BtsCI | GGATG | 9 cut(s) | 120, 429, 1148, 1750, 1754, 2451, 2468, 2923, 2980 |
| BtsI | GCAGTG | 5 cut(s) | 182, 1870, 2283, 2430, 3312 |
| BtuMI | TCGCGA | 1 cut(s) | 516 |
| Cac8I | GCNNGC | 4 cut(s) | 780, 846, 2685, 3376 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2102 |
| CciI | TCATGA | 2 cut(s) | 715, 3316 |
| CfoI | GCGC | 3 cut(s) | 1810, 3248, 3337 |
| Cfr13I | GGNCC | 4 cut(s) | 688, 728, 2685, 3470 |
| ClaI | ATCGAT | 1 cut(s) | 669 |
| CseI | GACGC | 1 cut(s) | 2987 |
| Csp6I | GTAC | 8 cut(s) | 656, 1407, 1477, 1601, 2673, 2708, 3282, 3452 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 956, 991 |
| CviQI | GTAC | 8 cut(s) | 656, 1407, 1477, 1601, 2673, 2708, 3282, 3452 |
| DraI | TTTAAA | 3 cut(s) | 2001, 2587, 2632 |
| EaeI | YGGCCR | 1 cut(s) | 214 |
| Eam1104I | CTCTTC | 3 cut(s) | 123, 2024, 3216 |
| EarI | CTCTTC | 3 cut(s) | 123, 2024, 3216 |
| Ecl136II | GAGCTC | 1 cut(s) | 832 |
| Eco130I | CCWWGG | 2 cut(s) | 2127, 2394 |
| Eco24I | GRGCYC | 1 cut(s) | 834 |
| Eco32I | GATATC | 2 cut(s) | 3231, 3501 |
| Eco47I | GGWCC | 3 cut(s) | 688, 728, 3470 |
| Eco53kI | GAGCTC | 1 cut(s) | 832 |
| Eco57I | CTGAAG | 2 cut(s) | 1032, 1284 |
| Eco81I | CCTNAGG | 2 cut(s) | 1896, 2103 |
| Eco88I | CYCGRG | 2 cut(s) | 20, 827 |
| Eco91I | GGTNACC | 1 cut(s) | 1277 |
| EcoICRI | GAGCTC | 1 cut(s) | 832 |
| EcoO65I | GGTNACC | 1 cut(s) | 1277 |
| EcoRI | GAATTC | 1 cut(s) | 1724 |
| EcoRII | CCWGG | 4 cut(s) | 730, 1273, 1822, 2368 |
| EcoRV | GATATC | 2 cut(s) | 3231, 3501 |
| EcoT14I | CCWWGG | 2 cut(s) | 2127, 2394 |
| EcoT22I | ATGCAT | 2 cut(s) | 1227, 2889 |
| EcoT38I | GRGCYC | 1 cut(s) | 834 |
| ErhI | CCWWGG | 2 cut(s) | 2127, 2394 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 240, 272, 543, 575, 864, 896, 1765, 1797 |
| FaqI | GGGAC | 3 cut(s) | 2763, 2801, 2876 |
| FauI | CCCGC | 1 cut(s) | 2676 |
| FbaI | TGATCA | 3 cut(s) | 1555, 3313, 3571 |
| FblI | GTMKAC | 2 cut(s) | 54, 2164 |
| Fnu4HI | GCNGC | 3 cut(s) | 201, 296, 450 |
| FokI | GGATG | 9 cut(s) | 107, 436, 1155, 1737, 1741, 2438, 2475, 2910, 2987 |
| FriOI | GRGCYC | 1 cut(s) | 834 |
| Fsp4HI | GCNGC | 3 cut(s) | 201, 296, 450 |
| FspBI | CTAG | 4 cut(s) | 89, 1373, 2172, 3296 |
| FspI | TGCGCA | 1 cut(s) | 3336 |
| GlaI | GCGC | 3 cut(s) | 1809, 3247, 3336 |
| GluI | GCNGC | 3 cut(s) | 201, 296, 450 |
| GsuI | CTGGAG | 1 cut(s) | 1430 |
| HaeIII | GGCC | 5 cut(s) | 216, 1548, 2687, 3330, 3378 |
| HapII | CCGG | 2 cut(s) | 1350, 1682 |
| HgaI | GACGC | 1 cut(s) | 2987 |
| HhaI | GCGC | 3 cut(s) | 1810, 3248, 3337 |
| Hin1I | GRCGYC | 1 cut(s) | 3612 |
| Hin6I | GCGC | 3 cut(s) | 1808, 3246, 3335 |
| HinP1I | GCGC | 3 cut(s) | 1808, 3246, 3335 |
| HincII | GTYRAC | 4 cut(s) | 55, 274, 1332, 2595 |
| HindII | GTYRAC | 4 cut(s) | 55, 274, 1332, 2595 |
| HindIII | AAGCTT | 3 cut(s) | 254, 1042, 2192 |
| HpaII | CCGG | 2 cut(s) | 1350, 1682 |
| HphI | GGTGA | 5 cut(s) | 1271, 1671, 2016, 2350, 2999 |
| Hpy166II | GTNNAC | 9 cut(s) | 55, 274, 688, 1332, 1479, 2036, 2165, 2595, 3514 |
| Hpy8I | GTNNAC | 9 cut(s) | 55, 274, 688, 1332, 1479, 2036, 2165, 2595, 3514 |
| Hpy99I | CGWCG | 2 cut(s) | 648, 3071 |
| HpyAV | CCTTC | 7 cut(s) | 69, 859, 1063, 1355, 2408, 2531, 3377 |
| HpyCH4III | ACNGT | 7 cut(s) | 605, 911, 1188, 1201, 1400, 2720, 3456 |
| HpyCH4IV | ACGT | 9 cut(s) | 148, 399, 510, 526, 646, 1458, 2275, 2696, 3343 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 455, 1231, 2893, 3397 |
| HpySE526I | ACGT | 9 cut(s) | 148, 399, 510, 526, 646, 1458, 2275, 2696, 3343 |
| Hsp92I | GRCGYC | 1 cut(s) | 3612 |
| HspAI | GCGC | 3 cut(s) | 1808, 3246, 3335 |
| Ksp22I | TGATCA | 3 cut(s) | 1555, 3313, 3571 |
| LguI | GCTCTTC | 1 cut(s) | 3216 |
| LmnI | GCTCC | 6 cut(s) | 1239, 1449, 1701, 2448, 3258, 3483 |
| Lsp1109I | GCAGC | 3 cut(s) | 187, 282, 436 |
| LweI | GCATC | 5 cut(s) | 129, 1795, 2430, 2460, 2990 |
| MaeI | CTAG | 4 cut(s) | 89, 1373, 2172, 3296 |
| MaeII | ACGT | 9 cut(s) | 148, 399, 510, 526, 646, 1458, 2275, 2696, 3343 |
| MfeI | CAATTG | 2 cut(s) | 986, 2753 |
| MflI | RGATCY | 1 cut(s) | 2140 |
| MhlI | GDGCHC | 2 cut(s) | 834, 3263 |
| MlsI | TGGCCA | 1 cut(s) | 216 |
| MluNI | TGGCCA | 1 cut(s) | 216 |
| MlyI | GAGTC | 3 cut(s) | 1359, 2125, 3230 |
| MmeI | TCCRAC | 4 cut(s) | 391, 3036, 3497, 3528 |
| Mox20I | TGGCCA | 1 cut(s) | 216 |
| Mph1103I | ATGCAT | 2 cut(s) | 1227, 2889 |
| MroXI | GAANNNNTTC | 4 cut(s) | 99, 1020, 1258, 1269 |
| MscI | TGGCCA | 1 cut(s) | 216 |
| MslI | CAYNNNNRTG | 7 cut(s) | 114, 2363, 2823, 2825, 2907, 3039, 3315 |
| Msp20I | TGGCCA | 1 cut(s) | 216 |
| MspA1I | CMGCKG | 1 cut(s) | 449 |
| MspCI | CTTAAG | 1 cut(s) | 1876 |
| MspI | CCGG | 2 cut(s) | 1350, 1682 |
| MspR9I | CCNGG | 4 cut(s) | 732, 1275, 1824, 2370 |
| MunI | CAATTG | 2 cut(s) | 986, 2753 |
| Mva1269I | GAATGC | 2 cut(s) | 351, 2896 |
| MvaI | CCWGG | 4 cut(s) | 732, 1275, 1824, 2370 |
| MvnI | CGCG | 2 cut(s) | 516, 3084 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 455, 1231, 2893, 3397 |
| NcoI | CCATGG | 1 cut(s) | 2394 |
| NlaIV | GGNNCC | 6 cut(s) | 1190, 1348, 1618, 1697, 1988, 3471 |
| NmeAIII | GCCGAG | 1 cut(s) | 212 |
| NmuCI | GTSAC | 6 cut(s) | 1123, 1277, 1664, 2022, 2570, 2987 |
| NruI | TCGCGA | 1 cut(s) | 516 |
| NsbI | TGCGCA | 1 cut(s) | 3336 |
| NsiI | ATGCAT | 2 cut(s) | 1227, 2889 |
| NspI | RCATGY | 3 cut(s) | 848, 1485, 3252 |
| NspV | TTCGAA | 1 cut(s) | 852 |
| OliI | CACNNNNGTG | 2 cut(s) | 2363, 2825 |
| PaeI | GCATGC | 1 cut(s) | 848 |
| PaeR7I | CTCGAG | 1 cut(s) | 827 |
| PagI | TCATGA | 2 cut(s) | 715, 3316 |
| PciI | ACATGT | 1 cut(s) | 1481 |
| PciSI | GCTCTTC | 1 cut(s) | 3216 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 2529, 2538 |
| PctI | GAATGC | 2 cut(s) | 351, 2896 |
| PdmI | GAANNNNTTC | 4 cut(s) | 99, 1020, 1258, 1269 |
| PflFI | GACNNNGTC | 1 cut(s) | 401 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1760 |
| PfoI | TCCNGGA | 1 cut(s) | 1822 |
| PkrI | GCNGC | 3 cut(s) | 202, 297, 451 |
| PleI | GAGTC | 3 cut(s) | 1359, 2124, 3230 |
| PpsI | GAGTC | 3 cut(s) | 1359, 2124, 3230 |
| Ppu21I | YACGTR | 2 cut(s) | 527, 2276 |
| PscI | ACATGT | 1 cut(s) | 1481 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2755 |
| PsiI | TTATAA | 1 cut(s) | 465 |
| Psp124BI | GAGCTC | 1 cut(s) | 834 |
| Psp6I | CCWGG | 4 cut(s) | 730, 1273, 1822, 2368 |
| PspEI | GGTNACC | 1 cut(s) | 1277 |
| PspGI | CCWGG | 4 cut(s) | 730, 1273, 1822, 2368 |
| PspN4I | GGNNCC | 6 cut(s) | 1190, 1348, 1618, 1697, 1988, 3471 |
| PspPI | GGNCC | 4 cut(s) | 688, 728, 2685, 3470 |
| PstI | CTGCAG | 2 cut(s) | 2460, 3376 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2102 |
| PsuI | RGATCY | 1 cut(s) | 2140 |
| PsyI | GACNNNGTC | 1 cut(s) | 401 |
| PvuII | CAGCTG | 1 cut(s) | 449 |
| RruI | TCGCGA | 1 cut(s) | 516 |
| RsaI | GTAC | 8 cut(s) | 657, 1408, 1478, 1602, 2674, 2709, 3283, 3453 |
| RsaNI | GTAC | 8 cut(s) | 656, 1407, 1477, 1601, 2673, 2708, 3282, 3452 |
| RseI | CAYNNNNRTG | 7 cut(s) | 114, 2363, 2823, 2825, 2907, 3039, 3315 |
| SacI | GAGCTC | 1 cut(s) | 834 |
| SalI | GTCGAC | 1 cut(s) | 53 |
| SapI | GCTCTTC | 1 cut(s) | 3216 |
| SatI | GCNGC | 3 cut(s) | 201, 296, 450 |
| Sau96I | GGNCC | 4 cut(s) | 688, 728, 2685, 3470 |
| SbfI | CCTGCAGG | 2 cut(s) | 2460, 3376 |
| ScaI | AGTACT | 1 cut(s) | 3453 |
| SchI | GAGTC | 3 cut(s) | 1359, 2125, 3230 |
| ScrFI | CCNGG | 4 cut(s) | 732, 1275, 1824, 2370 |
| SdaI | CCTGCAGG | 2 cut(s) | 2460, 3376 |
| SduI | GDGCHC | 2 cut(s) | 834, 3263 |
| SfaNI | GCATC | 5 cut(s) | 129, 1795, 2430, 2460, 2990 |
| SfcI | CTRYAG | 4 cut(s) | 1575, 1971, 2456, 3372 |
| Sfr274I | CTCGAG | 1 cut(s) | 827 |
| SfuI | TTCGAA | 1 cut(s) | 852 |
| SinI | GGWCC | 3 cut(s) | 688, 728, 3470 |
| SlaI | CTCGAG | 1 cut(s) | 827 |
| SmiI | ATTTAAAT | 2 cut(s) | 2001, 2632 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 114, 2363, 2823, 2825, 2907, 3039, 3315 |
| SmlI | CTYRAG | 5 cut(s) | 195, 827, 1583, 1628, 1876 |
| SmoI | CTYRAG | 5 cut(s) | 195, 827, 1583, 1628, 1876 |
| SphI | GCATGC | 1 cut(s) | 848 |
| Sse8387I | CCTGCAGG | 2 cut(s) | 2460, 3376 |
| SsiI | CCGC | 3 cut(s) | 2435, 2475, 2683 |
| SspI | AATATT | 1 cut(s) | 1134 |
| SspMI | CTAG | 4 cut(s) | 89, 1373, 2172, 3296 |
| SstI | GAGCTC | 1 cut(s) | 834 |
| StyD4I | CCNGG | 4 cut(s) | 730, 1273, 1822, 2368 |
| StyI | CCWWGG | 2 cut(s) | 2127, 2394 |
| SwaI | ATTTAAAT | 2 cut(s) | 2001, 2632 |
| TaaI | ACNGT | 7 cut(s) | 605, 911, 1188, 1201, 1400, 2720, 3456 |
| TaiI | ACGT | 9 cut(s) | 151, 402, 513, 529, 649, 1461, 2278, 2699, 3346 |
| TatI | WGTACW | 4 cut(s) | 1406, 1476, 3281, 3451 |
| TseFI | GTSAC | 6 cut(s) | 1123, 1277, 1664, 2022, 2570, 2987 |
| TseI | GCWGC | 3 cut(s) | 200, 295, 449 |
| Tsp45I | GTSAC | 6 cut(s) | 1123, 1277, 1664, 2022, 2570, 2987 |
| TspGWI | ACGGA | 2 cut(s) | 2891, 3470 |
| Tth111I | GACNNNGTC | 1 cut(s) | 401 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1760 |
| Vha464I | CTTAAG | 1 cut(s) | 1876 |
| VpaK11BI | GGWCC | 3 cut(s) | 688, 728, 3470 |
| XbaI | TCTAGA | 1 cut(s) | 1372 |
| XceI | RCATGY | 3 cut(s) | 848, 1485, 3252 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2928 |
| XhoI | CTCGAG | 1 cut(s) | 827 |
| XmiI | GTMKAC | 2 cut(s) | 54, 2164 |
| XmnI | GAANNNNTTC | 4 cut(s) | 99, 1020, 1258, 1269 |
| XspI | CTAG | 4 cut(s) | 89, 1373, 2172, 3296 |
| ZrmI | AGTACT | 1 cut(s) | 3453 |
| Zsp2I | ATGCAT | 2 cut(s) | 1227, 2889 |