TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 23 - 194 | 6.4e-54 | TIR domain |
| TIR_2 | PF13676 | 25 - 122 | 8.7e-15 | TIR domain |
| NB-ARC | PF00931 | 218 - 369 | 5.9e-13 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 431 - 502 | 5.7e-18 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 695 - 862 | 7.1e-13 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1419 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 60, 2840 |
| AccI | GTMKAC | 3 cut(s) | 313, 1792, 3003 |
| AccII | CGCG | 1 cut(s) | 2997 |
| AciI | CCGC | 4 cut(s) | 214, 504, 2997, 3053 |
| AclI | AACGTT | 2 cut(s) | 771, 1525 |
| AclWI | GGATC | 7 cut(s) | 71, 242, 887, 957, 1588, 2058, 3094 |
| AcsI | RAATTY | 4 cut(s) | 475, 675, 821, 1251 |
| AcuI | CTGAAG | 5 cut(s) | 70, 348, 486, 1605, 2955 |
| AdeI | CACNNNGTG | 1 cut(s) | 334 |
| AfaI | GTAC | 8 cut(s) | 725, 918, 1698, 1776, 1823, 1966, 2229, 3078 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 60, 510, 1394, 1846, 2542, 2674, 2840 |
| AflIII | ACRYGT | 1 cut(s) | 580 |
| AjiI | CACGTC | 1 cut(s) | 1345 |
| AjnI | CCWGG | 4 cut(s) | 230, 991, 1516, 2764 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1622, 1654 |
| Alw21I | GWGCWC | 2 cut(s) | 594, 2687 |
| Alw26I | GTCTC | 2 cut(s) | 715, 1467 |
| Alw44I | GTGCAC | 1 cut(s) | 2683 |
| AlwI | GGATC | 7 cut(s) | 71, 242, 887, 957, 1588, 2058, 3094 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2840 |
| AoxI | GGCC | 2 cut(s) | 2245, 2434 |
| ApaLI | GTGCAC | 1 cut(s) | 2683 |
| ApeKI | GCWGC | 4 cut(s) | 470, 1297, 2034, 3252 |
| ApoI | RAATTY | 4 cut(s) | 475, 675, 821, 1251 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 402, 1236, 1307, 2667 |
| AspA2I | CCTAGG | 1 cut(s) | 223 |
| AspS9I | GGNCC | 6 cut(s) | 228, 490, 989, 1405, 1918, 2261 |
| AsuHPI | GGTGA | 4 cut(s) | 440, 2819, 3099, 3130 |
| AsuII | TTCGAA | 1 cut(s) | 2671 |
| AvaII | GGWCC | 6 cut(s) | 228, 490, 989, 1405, 1918, 2261 |
| AvrII | CCTAGG | 1 cut(s) | 223 |
| BaeGI | GKGCMC | 2 cut(s) | 330, 2687 |
| BanI | GGYRCC | 1 cut(s) | 1419 |
| BauI | CACGAG | 1 cut(s) | 612 |
| BbsI | GAAGAC | 5 cut(s) | 102, 241, 438, 707, 1965 |
| Bbv12I | GWGCWC | 2 cut(s) | 594, 2687 |
| BbvI | GCAGC | 4 cut(s) | 457, 1309, 2021, 3264 |
| BccI | CCATC | 6 cut(s) | 480, 503, 1274, 2206, 2741, 2915 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2836, 2870 |
| BciT130I | CCWGG | 4 cut(s) | 232, 993, 1518, 2766 |
| BciVI | GTATCC | 1 cut(s) | 1045 |
| BclI | TGATCA | 2 cut(s) | 940, 3184 |
| BcoDI | GTCTC | 2 cut(s) | 715, 1467 |
| BfmI | CTRYAG | 4 cut(s) | 969, 1554, 2329, 2473 |
| BfuI | GTATCC | 1 cut(s) | 1045 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2433 |
| BglII | AGATCT | 1 cut(s) | 2557 |
| BisI | GCNGC | 4 cut(s) | 471, 1298, 2035, 3253 |
| BlnI | CCTAGG | 1 cut(s) | 223 |
| BlsI | GCNGC | 4 cut(s) | 472, 1299, 2036, 3254 |
| Bme1390I | CCNGG | 4 cut(s) | 232, 993, 1518, 2766 |
| Bme18I | GGWCC | 6 cut(s) | 228, 490, 989, 1405, 1918, 2261 |
| BmgBI | CACGTC | 1 cut(s) | 1345 |
| BmgT120I | GGNCC | 6 cut(s) | 228, 490, 989, 1405, 1918, 2261 |
| BmiI | GGNNCC | 4 cut(s) | 229, 491, 792, 1421 |
| BmrFI | CCNGG | 4 cut(s) | 232, 993, 1518, 2766 |
| BmrI | ACTGGG | 1 cut(s) | 332 |
| BmuI | ACTGGG | 1 cut(s) | 332 |
| BoxI | GACNNNNGTC | 2 cut(s) | 707, 1788 |
| BpiI | GAAGAC | 5 cut(s) | 102, 241, 438, 707, 1965 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 442, 474 |
| BpmI | CTGGAG | 4 cut(s) | 1728, 2705, 2817, 2868 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2045 |
| Bpu14I | TTCGAA | 1 cut(s) | 2671 |
| BpuEI | CTTGAG | 5 cut(s) | 100, 238, 1105, 1883, 1961 |
| BsaAI | YACGTR | 2 cut(s) | 583, 1696 |
| BsaBI | GATNNNNATC | 3 cut(s) | 939, 2463, 3183 |
| BsaJI | CCNNGG | 7 cut(s) | 223, 714, 1516, 2057, 2658, 2764, 3111 |
| BsaWI | WCCGGW | 1 cut(s) | 1915 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 60, 510, 1394, 1846, 2542, 2674, 2840 |
| Bse1I | ACTGG | 7 cut(s) | 213, 327, 951, 1251, 1711, 2834, 2845 |
| Bse3DI | GCAATG | 2 cut(s) | 1815, 2467 |
| Bse8I | GATNNNNATC | 3 cut(s) | 939, 2463, 3183 |
| BseBI | CCWGG | 4 cut(s) | 232, 993, 1518, 2766 |
| BseDI | CCNNGG | 7 cut(s) | 223, 714, 1516, 2057, 2658, 2764, 3111 |
| BseJI | GATNNNNATC | 3 cut(s) | 939, 2463, 3183 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 60, 510, 1394, 1846, 2542, 2674, 2840 |
| BseMI | GCAATG | 2 cut(s) | 1815, 2467 |
| BseMII | CTCAG | 5 cut(s) | 1523, 1664, 2443, 2604, 2772 |
| BseNI | ACTGG | 7 cut(s) | 213, 327, 951, 1251, 1711, 2834, 2845 |
| BseRI | GAGGAG | 2 cut(s) | 22, 2708 |
| BseSI | GKGCMC | 2 cut(s) | 330, 2687 |
| BseXI | GCAGC | 4 cut(s) | 457, 1309, 2021, 3264 |
| BseYI | CCCAGC | 2 cut(s) | 2423, 3016 |
| BsgI | GTGCAG | 1 cut(s) | 317 |
| Bsh1236I | CGCG | 1 cut(s) | 2997 |
| BshFI | GGCC | 2 cut(s) | 2247, 2436 |
| BshNI | GGYRCC | 1 cut(s) | 1419 |
| BsiHKAI | GWGCWC | 2 cut(s) | 594, 2687 |
| BsiSI | CCGG | 1 cut(s) | 1916 |
| BslFI | GGGAC | 3 cut(s) | 503, 2723, 3284 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 60, 510, 1394, 1846, 2542, 2674, 2840 |
| BsmAI | GTCTC | 2 cut(s) | 715, 1467 |
| BsmFI | GGGAC | 3 cut(s) | 503, 2723, 3284 |
| BsnI | GGCC | 2 cut(s) | 2247, 2436 |
| Bsp119I | TTCGAA | 1 cut(s) | 2671 |
| Bsp1286I | GDGCHC | 3 cut(s) | 330, 594, 2687 |
| Bsp1407I | TGTACA | 2 cut(s) | 723, 1964 |
| BspACI | CCGC | 4 cut(s) | 214, 504, 2997, 3053 |
| BspANI | GGCC | 2 cut(s) | 2247, 2436 |
| BspCNI | CTCAG | 5 cut(s) | 1522, 1665, 2442, 2605, 2773 |
| BspFNI | CGCG | 1 cut(s) | 2997 |
| BspHI | TCATGA | 2 cut(s) | 418, 2356 |
| BspLI | GGNNCC | 4 cut(s) | 229, 491, 792, 1421 |
| BspPI | GGATC | 7 cut(s) | 71, 242, 887, 957, 1588, 2058, 3094 |
| BspT104I | TTCGAA | 1 cut(s) | 2671 |
| BspT107I | GGYRCC | 1 cut(s) | 1419 |
| BsrDI | GCAATG | 2 cut(s) | 1815, 2467 |
| BsrGI | TGTACA | 2 cut(s) | 723, 1964 |
| BsrI | ACTGG | 7 cut(s) | 213, 327, 951, 1251, 1711, 2834, 2845 |
| BssECI | CCNNGG | 7 cut(s) | 223, 714, 1516, 2057, 2658, 2764, 3111 |
| BssSI | CACGAG | 1 cut(s) | 612 |
| BssT1I | CCWWGG | 3 cut(s) | 223, 714, 2057 |
| Bst2BI | CACGAG | 1 cut(s) | 612 |
| Bst2UI | CCWGG | 4 cut(s) | 232, 993, 1518, 2766 |
| Bst6I | CTCTTC | 3 cut(s) | 178, 1080, 1661 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1465 |
| BstAUI | TGTACA | 2 cut(s) | 723, 1964 |
| BstBAI | YACGTR | 2 cut(s) | 583, 1696 |
| BstBI | TTCGAA | 1 cut(s) | 2671 |
| BstC8I | GCNNGC | 5 cut(s) | 216, 1751, 2683, 3055, 3264 |
| BstDSI | CCRYGG | 2 cut(s) | 2658, 3111 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1844 |
| BstFNI | CGCG | 1 cut(s) | 2997 |
| BstMAI | GTCTC | 2 cut(s) | 715, 1467 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 26, 90, 1456, 1465, 1678, 1750, 2424, 2433 |
| BstNI | CCWGG | 4 cut(s) | 232, 993, 1518, 2766 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 707, 1788 |
| BstSCI | CCNGG | 4 cut(s) | 230, 991, 1516, 2764 |
| BstSFI | CTRYAG | 4 cut(s) | 969, 1554, 2329, 2473 |
| BstSLI | GKGCMC | 2 cut(s) | 330, 2687 |
| BstSNI | TACGTA | 1 cut(s) | 1696 |
| BstUI | CGCG | 1 cut(s) | 2997 |
| BstV1I | GCAGC | 4 cut(s) | 457, 1309, 2021, 3264 |
| BstV2I | GAAGAC | 5 cut(s) | 102, 241, 438, 707, 1965 |
| BstX2I | RGATCY | 6 cut(s) | 63, 234, 1580, 2050, 2557, 3086 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 856 |
| BstYI | RGATCY | 6 cut(s) | 63, 234, 1580, 2050, 2557, 3086 |
| BsuI | GTATCC | 1 cut(s) | 1045 |
| BsuRI | GGCC | 2 cut(s) | 2247, 2436 |
| BtgI | CCRYGG | 2 cut(s) | 2658, 3111 |
| BtgZI | GCGATG | 1 cut(s) | 2355 |
| BtrI | CACGTC | 1 cut(s) | 1345 |
| BtsI | GCAGTG | 1 cut(s) | 2854 |
| BtsIMutI | CAGTG | 6 cut(s) | 861, 1648, 1704, 2437, 2854, 3106 |
| Cac8I | GCNNGC | 5 cut(s) | 216, 1751, 2683, 3055, 3264 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2840 |
| CciI | TCATGA | 2 cut(s) | 418, 2356 |
| Cfr13I | GGNCC | 6 cut(s) | 228, 490, 989, 1405, 1918, 2261 |
| Csp6I | GTAC | 8 cut(s) | 724, 917, 1697, 1775, 1822, 1965, 2228, 3077 |
| CviQI | GTAC | 8 cut(s) | 724, 917, 1697, 1775, 1822, 1965, 2228, 3077 |
| DraI | TTTAAA | 2 cut(s) | 1189, 1767 |
| DraIII | CACNNNGTG | 1 cut(s) | 334 |
| Eam1104I | CTCTTC | 3 cut(s) | 178, 1080, 1661 |
| EarI | CTCTTC | 3 cut(s) | 178, 1080, 1661 |
| Eco105I | TACGTA | 1 cut(s) | 1696 |
| Eco130I | CCWWGG | 3 cut(s) | 223, 714, 2057 |
| Eco32I | GATATC | 2 cut(s) | 651, 835 |
| Eco47I | GGWCC | 6 cut(s) | 228, 490, 989, 1405, 1918, 2261 |
| Eco57I | CTGAAG | 5 cut(s) | 70, 348, 486, 1605, 2955 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1844 |
| EcoO109I | RGGNCCY | 2 cut(s) | 490, 1405 |
| EcoRII | CCWGG | 4 cut(s) | 230, 991, 1516, 2764 |
| EcoRV | GATATC | 2 cut(s) | 651, 835 |
| EcoT14I | CCWWGG | 3 cut(s) | 223, 714, 2057 |
| EcoT22I | ATGCAT | 1 cut(s) | 1461 |
| ErhI | CCWWGG | 3 cut(s) | 223, 714, 2057 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1077, 1109, 1186, 1218, 2558, 2590 |
| FaqI | GGGAC | 3 cut(s) | 503, 2723, 3284 |
| FauI | CCCGC | 2 cut(s) | 207, 3046 |
| FbaI | TGATCA | 2 cut(s) | 940, 3184 |
| FblI | GTMKAC | 3 cut(s) | 313, 1792, 3003 |
| Fnu4HI | GCNGC | 4 cut(s) | 471, 1298, 2035, 3253 |
| Fsp4HI | GCNGC | 4 cut(s) | 471, 1298, 2035, 3253 |
| GluI | GCNGC | 4 cut(s) | 471, 1298, 2035, 3253 |
| GsaI | CCCAGC | 2 cut(s) | 2427, 3020 |
| GsuI | CTGGAG | 4 cut(s) | 1728, 2705, 2817, 2868 |
| HaeIII | GGCC | 2 cut(s) | 2247, 2436 |
| HapII | CCGG | 1 cut(s) | 1916 |
| HincII | GTYRAC | 2 cut(s) | 358, 2893 |
| HindII | GTYRAC | 2 cut(s) | 358, 2893 |
| HindIII | AAGCTT | 4 cut(s) | 399, 750, 1273, 2444 |
| HpaII | CCGG | 1 cut(s) | 1916 |
| HphI | GGTGA | 4 cut(s) | 440, 2819, 3099, 3130 |
| HpyAV | CCTTC | 9 cut(s) | 184, 252, 372, 512, 1589, 2292, 2429, 2678, 2979 |
| HpyCH4IV | ACGT | 8 cut(s) | 134, 582, 771, 1344, 1525, 1695, 1738, 3060 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 26, 90, 1456, 1465, 1678, 1750, 2424, 2433 |
| HpySE526I | ACGT | 8 cut(s) | 134, 582, 771, 1344, 1525, 1695, 1738, 3060 |
| Ksp22I | TGATCA | 2 cut(s) | 940, 3184 |
| LmnI | GCTCC | 1 cut(s) | 2741 |
| Lsp1109I | GCAGC | 4 cut(s) | 457, 1309, 2021, 3264 |
| MaeII | ACGT | 8 cut(s) | 134, 582, 771, 1344, 1525, 1695, 1738, 3060 |
| MfeI | CAATTG | 2 cut(s) | 1028, 1488 |
| MflI | RGATCY | 6 cut(s) | 63, 234, 1580, 2050, 2557, 3086 |
| MhlI | GDGCHC | 3 cut(s) | 330, 594, 2687 |
| MlyI | GAGTC | 5 cut(s) | 1099, 1593, 1923, 2377, 2695 |
| MmeI | TCCRAC | 6 cut(s) | 580, 652, 1975, 2106, 2523, 3064 |
| Mph1103I | ATGCAT | 1 cut(s) | 1461 |
| MroXI | GAANNNNTTC | 4 cut(s) | 402, 1236, 1307, 2667 |
| MslI | CAYNNNNRTG | 2 cut(s) | 639, 1343 |
| MspA1I | CMGCKG | 1 cut(s) | 2888 |
| MspI | CCGG | 1 cut(s) | 1916 |
| MspR9I | CCNGG | 4 cut(s) | 232, 993, 1518, 2766 |
| MunI | CAATTG | 2 cut(s) | 1028, 1488 |
| MvaI | CCWGG | 4 cut(s) | 232, 993, 1518, 2766 |
| MvnI | CGCG | 1 cut(s) | 2997 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 26, 90, 1456, 1465, 1678, 1750, 2424, 2433 |
| NlaIV | GGNNCC | 4 cut(s) | 229, 491, 792, 1421 |
| NmeAIII | GCCGAG | 1 cut(s) | 613 |
| NmuCI | GTSAC | 4 cut(s) | 805, 2807, 3105, 3149 |
| NsiI | ATGCAT | 1 cut(s) | 1461 |
| NspV | TTCGAA | 1 cut(s) | 2671 |
| PagI | TCATGA | 2 cut(s) | 418, 2356 |
| PdmI | GAANNNNTTC | 4 cut(s) | 402, 1236, 1307, 2667 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 60, 2840 |
| PfoI | TCCNGGA | 2 cut(s) | 230, 991 |
| PkrI | GCNGC | 4 cut(s) | 472, 1299, 2036, 3254 |
| PleI | GAGTC | 5 cut(s) | 1098, 1593, 1923, 2376, 2695 |
| PpsI | GAGTC | 5 cut(s) | 1098, 1593, 1923, 2376, 2695 |
| Ppu21I | YACGTR | 2 cut(s) | 583, 1696 |
| PpuMI | RGGWCCY | 2 cut(s) | 490, 1405 |
| PshAI | GACNNNNGTC | 2 cut(s) | 707, 1788 |
| Psp1406I | AACGTT | 2 cut(s) | 771, 1525 |
| Psp5II | RGGWCCY | 2 cut(s) | 490, 1405 |
| Psp6I | CCWGG | 4 cut(s) | 230, 991, 1516, 2764 |
| PspFI | CCCAGC | 2 cut(s) | 2423, 3016 |
| PspGI | CCWGG | 4 cut(s) | 230, 991, 1516, 2764 |
| PspN4I | GGNNCC | 4 cut(s) | 229, 491, 792, 1421 |
| PspPI | GGNCC | 6 cut(s) | 228, 490, 989, 1405, 1918, 2261 |
| PspPPI | RGGWCCY | 2 cut(s) | 490, 1405 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 445, 477 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2840 |
| PsuI | RGATCY | 6 cut(s) | 63, 234, 1580, 2050, 2557, 3086 |
| PvuII | CAGCTG | 1 cut(s) | 2888 |
| RsaI | GTAC | 8 cut(s) | 725, 918, 1698, 1776, 1823, 1966, 2229, 3078 |
| RsaNI | GTAC | 8 cut(s) | 724, 917, 1697, 1775, 1822, 1965, 2228, 3077 |
| RseI | CAYNNNNRTG | 2 cut(s) | 639, 1343 |
| SatI | GCNGC | 4 cut(s) | 471, 1298, 2035, 3253 |
| Sau96I | GGNCC | 6 cut(s) | 228, 490, 989, 1405, 1918, 2261 |
| SchI | GAGTC | 5 cut(s) | 1099, 1593, 1923, 2377, 2695 |
| ScrFI | CCNGG | 4 cut(s) | 232, 993, 1518, 2766 |
| SduI | GDGCHC | 3 cut(s) | 330, 594, 2687 |
| SfcI | CTRYAG | 4 cut(s) | 969, 1554, 2329, 2473 |
| SfuI | TTCGAA | 1 cut(s) | 2671 |
| SinI | GGWCC | 6 cut(s) | 228, 490, 989, 1405, 1918, 2261 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 639, 1343 |
| SmlI | CTYRAG | 5 cut(s) | 79, 253, 1120, 1862, 1940 |
| SmoI | CTYRAG | 5 cut(s) | 79, 253, 1120, 1862, 1940 |
| SnaBI | TACGTA | 1 cut(s) | 1696 |
| SsiI | CCGC | 4 cut(s) | 214, 504, 2997, 3053 |
| SspI | AATATT | 1 cut(s) | 345 |
| StyD4I | CCNGG | 4 cut(s) | 230, 991, 1516, 2764 |
| StyI | CCWWGG | 3 cut(s) | 223, 714, 2057 |
| TaiI | ACGT | 8 cut(s) | 137, 585, 774, 1347, 1528, 1698, 1741, 3063 |
| TaqI | TCGA | 1 cut(s) | 2671 |
| TatI | WGTACW | 3 cut(s) | 723, 1821, 1964 |
| TscAI | CASTG | 6 cut(s) | 861, 1648, 1711, 2437, 2854, 3106 |
| TseFI | GTSAC | 4 cut(s) | 805, 2807, 3105, 3149 |
| TseI | GCWGC | 4 cut(s) | 470, 1297, 2034, 3252 |
| Tsp45I | GTSAC | 4 cut(s) | 805, 2807, 3105, 3149 |
| TspGWI | ACGGA | 4 cut(s) | 331, 1981, 2647, 3186 |
| TspRI | CASTG | 6 cut(s) | 861, 1648, 1711, 2437, 2854, 3106 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 60, 2840 |
| VneI | GTGCAC | 1 cut(s) | 2683 |
| VpaK11BI | GGWCC | 6 cut(s) | 228, 490, 989, 1405, 1918, 2261 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1844 |
| XapI | RAATTY | 4 cut(s) | 475, 675, 821, 1251 |
| XbaI | TCTAGA | 1 cut(s) | 2455 |
| XmaJI | CCTAGG | 1 cut(s) | 223 |
| XmiI | GTMKAC | 3 cut(s) | 313, 1792, 3003 |
| XmnI | GAANNNNTTC | 4 cut(s) | 402, 1236, 1307, 2667 |
| Zsp2I | ATGCAT | 1 cut(s) | 1461 |