TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 699, 980, 2079 |
| AarI | CACCTGC | 1 cut(s) | 477 |
| Acc36I | ACCTGC | 2 cut(s) | 477, 1833 |
| Acc65I | GGTACC | 1 cut(s) | 407 |
| AccB1I | GGYRCC | 3 cut(s) | 258, 407, 1548 |
| AciI | CCGC | 5 cut(s) | 1163, 1508, 1828, 2351, 2364 |
| AclI | AACGTT | 2 cut(s) | 37, 1426 |
| AclWI | GGATC | 5 cut(s) | 221, 631, 921, 2933, 2946 |
| AcoI | YGGCCR | 1 cut(s) | 2439 |
| AcsI | RAATTY | 8 cut(s) | 460, 648, 704, 1245, 1260, 1618, 1847, 2344 |
| AcuI | CTGAAG | 3 cut(s) | 49, 1614, 2790 |
| AcyI | GRCGYC | 1 cut(s) | 1549 |
| AfaI | GTAC | 6 cut(s) | 409, 415, 607, 891, 1704, 1832 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 109, 1112, 1403 |
| AflIII | ACRYGT | 1 cut(s) | 1411 |
| AjnI | CCWGG | 3 cut(s) | 428, 964, 1809 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2874, 2906 |
| AleI | CACNNNNGTG | 1 cut(s) | 1383 |
| Alw21I | GWGCWC | 3 cut(s) | 1074, 1226, 1860 |
| Alw26I | GTCTC | 3 cut(s) | 865, 1394, 2052 |
| AlwI | GGATC | 5 cut(s) | 221, 631, 921, 2933, 2946 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2233 |
| Ama87I | CYCGRG | 2 cut(s) | 1041, 3109 |
| AoxI | GGCC | 2 cut(s) | 2254, 2439 |
| ApeKI | GCWGC | 2 cut(s) | 440, 455 |
| ApoI | RAATTY | 8 cut(s) | 460, 648, 704, 1245, 1260, 1618, 1847, 2344 |
| AseI | ATTAAT | 1 cut(s) | 855 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 583, 795, 1500, 2505 |
| Asp718I | GGTACC | 1 cut(s) | 407 |
| AspLEI | GCGC | 1 cut(s) | 1551 |
| AspS9I | GGNCC | 9 cut(s) | 97, 374, 962, 1822, 2366, 2780, 3005, 3050, 3070 |
| AsuHPI | GGTGA | 5 cut(s) | 1727, 1914, 1985, 2150, 2876 |
| AsuII | TTCGAA | 2 cut(s) | 1934, 2519 |
| AvaI | CYCGRG | 2 cut(s) | 1041, 3109 |
| AvaII | GGWCC | 9 cut(s) | 97, 374, 962, 1822, 2366, 2780, 3005, 3050, 3070 |
| BamHI | GGATCC | 1 cut(s) | 2938 |
| BanI | GGYRCC | 3 cut(s) | 258, 407, 1548 |
| BanII | GRGCYC | 1 cut(s) | 1074 |
| BauI | CACGAG | 1 cut(s) | 588 |
| BbsI | GAAGAC | 1 cut(s) | 220 |
| Bbv12I | GWGCWC | 3 cut(s) | 1074, 1226, 1860 |
| BbvI | GCAGC | 2 cut(s) | 427, 442 |
| BccI | CCATC | 5 cut(s) | 2215, 2251, 2544, 2561, 3186 |
| BceAI | ACGGC | 1 cut(s) | 1396 |
| BciT130I | CCWGG | 3 cut(s) | 430, 966, 1811 |
| BciVI | GTATCC | 1 cut(s) | 436 |
| BcoDI | GTCTC | 3 cut(s) | 865, 1394, 2052 |
| BfaI | CTAG | 8 cut(s) | 210, 399, 990, 1007, 1610, 2370, 2498, 2930 |
| BfmI | CTRYAG | 2 cut(s) | 2214, 2543 |
| BfoI | RGCGCY | 1 cut(s) | 1552 |
| BfuAI | ACCTGC | 2 cut(s) | 477, 1833 |
| BfuI | GTATCC | 1 cut(s) | 436 |
| BisI | GCNGC | 2 cut(s) | 441, 456 |
| BlsI | GCNGC | 2 cut(s) | 442, 457 |
| BmcAI | AGTACT | 1 cut(s) | 607 |
| Bme1390I | CCNGG | 3 cut(s) | 430, 966, 1811 |
| Bme18I | GGWCC | 9 cut(s) | 97, 374, 962, 1822, 2366, 2780, 3005, 3050, 3070 |
| BmeT110I | CYCGRG | 2 cut(s) | 1041, 3109 |
| BmgT120I | GGNCC | 9 cut(s) | 97, 374, 962, 1822, 2366, 2780, 3005, 3050, 3070 |
| BmiI | GGNNCC | 4 cut(s) | 260, 409, 1550, 2940 |
| BmrFI | CCNGG | 3 cut(s) | 430, 966, 1811 |
| BmrI | ACTGGG | 2 cut(s) | 311, 566 |
| BmsI | GCATC | 3 cut(s) | 1099, 1279, 1455 |
| BmuI | ACTGGG | 2 cut(s) | 311, 566 |
| BpiI | GAAGAC | 1 cut(s) | 220 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 427, 459 |
| BpmI | CTGGAG | 1 cut(s) | 1846 |
| Bpu14I | TTCGAA | 2 cut(s) | 1934, 2519 |
| BpuEI | CTTGAG | 5 cut(s) | 79, 284, 1892, 1970, 3127 |
| BsaAI | YACGTR | 1 cut(s) | 1412 |
| BsaBI | GATNNNNATC | 2 cut(s) | 912, 1302 |
| BsaHI | GRCGYC | 1 cut(s) | 1549 |
| BsaI | GGTCTC | 1 cut(s) | 2052 |
| BsaJI | CCNNGG | 3 cut(s) | 202, 1227, 2182 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1401, 1431 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 109, 1112, 1403 |
| Bse118I | RCCGGY | 1 cut(s) | 534 |
| Bse1I | ACTGG | 7 cut(s) | 306, 367, 411, 572, 1717, 1996, 2902 |
| Bse8I | GATNNNNATC | 2 cut(s) | 912, 1302 |
| BseBI | CCWGG | 3 cut(s) | 430, 966, 1811 |
| BseDI | CCNNGG | 3 cut(s) | 202, 1227, 2182 |
| BseGI | GGATG | 5 cut(s) | 8, 2207, 2538, 2555, 3178 |
| BseJI | GATNNNNATC | 2 cut(s) | 912, 1302 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 109, 1112, 1403 |
| BseMII | CTCAG | 6 cut(s) | 42, 246, 1288, 1909, 2045, 2398 |
| BseNI | ACTGG | 7 cut(s) | 306, 367, 411, 572, 1717, 1996, 2902 |
| BseRI | GAGGAG | 7 cut(s) | 4, 7, 10, 281, 1687, 2778, 3004 |
| BseXI | GCAGC | 2 cut(s) | 427, 442 |
| BsgI | GTGCAG | 4 cut(s) | 212, 296, 1361, 2473 |
| BshFI | GGCC | 2 cut(s) | 2256, 2441 |
| BshNI | GGYRCC | 3 cut(s) | 258, 407, 1548 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1074, 1226, 1860 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1041, 3109 |
| BsiSI | CCGG | 4 cut(s) | 126, 377, 535, 2438 |
| BslFI | GGGAC | 1 cut(s) | 1498 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 109, 1112, 1403 |
| BsmAI | GTCTC | 3 cut(s) | 865, 1394, 2052 |
| BsmFI | GGGAC | 1 cut(s) | 1498 |
| BsnI | GGCC | 2 cut(s) | 2256, 2441 |
| Bso31I | GGTCTC | 1 cut(s) | 2052 |
| BsoBI | CYCGRG | 2 cut(s) | 1041, 3109 |
| Bsp119I | TTCGAA | 2 cut(s) | 1934, 2519 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1074, 1226, 1860 |
| Bsp1407I | TGTACA | 1 cut(s) | 1702 |
| Bsp143I | GATC | 7 cut(s) | 213, 279, 525, 623, 913, 994, 2938 |
| Bsp19I | CCATGG | 1 cut(s) | 2182 |
| BspACI | CCGC | 5 cut(s) | 1163, 1508, 1828, 2351, 2364 |
| BspANI | GGCC | 2 cut(s) | 2256, 2441 |
| BspCNI | CTCAG | 6 cut(s) | 41, 245, 1287, 1908, 2046, 2397 |
| BspHI | TCATGA | 1 cut(s) | 3025 |
| BspLI | GGNNCC | 4 cut(s) | 260, 409, 1550, 2940 |
| BspMI | ACCTGC | 2 cut(s) | 477, 1833 |
| BspPI | GGATC | 5 cut(s) | 221, 631, 921, 2933, 2946 |
| BspQI | GCTCTTC | 1 cut(s) | 450 |
| BspT104I | TTCGAA | 2 cut(s) | 1934, 2519 |
| BspT107I | GGYRCC | 3 cut(s) | 258, 407, 1548 |
| BspTNI | GGTCTC | 1 cut(s) | 2052 |
| BsrFI | RCCGGY | 1 cut(s) | 534 |
| BsrGI | TGTACA | 1 cut(s) | 1702 |
| BsrI | ACTGG | 7 cut(s) | 306, 367, 411, 572, 1717, 1996, 2902 |
| BssAI | RCCGGY | 1 cut(s) | 534 |
| BssECI | CCNNGG | 3 cut(s) | 202, 1227, 2182 |
| BssMI | GATC | 7 cut(s) | 213, 279, 525, 623, 913, 994, 2938 |
| BssNI | GRCGYC | 1 cut(s) | 1549 |
| BssSI | CACGAG | 1 cut(s) | 588 |
| BssT1I | CCWWGG | 2 cut(s) | 1227, 2182 |
| Bst2BI | CACGAG | 1 cut(s) | 588 |
| Bst2UI | CCWGG | 3 cut(s) | 430, 966, 1811 |
| Bst4CI | ACNGT | 5 cut(s) | 1151, 1441, 1973, 2680, 2908 |
| Bst6I | CTCTTC | 5 cut(s) | 28, 450, 1590, 2178, 2612 |
| BstACI | GRCGYC | 1 cut(s) | 1549 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1474 |
| BstAUI | TGTACA | 1 cut(s) | 1702 |
| BstBAI | YACGTR | 1 cut(s) | 1412 |
| BstBI | TTCGAA | 2 cut(s) | 1934, 2519 |
| BstC8I | GCNNGC | 8 cut(s) | 195, 484, 536, 1086, 1167, 1757, 2443, 3128 |
| BstDEI | CTNAG | 6 cut(s) | 28, 232, 1274, 1895, 2054, 2384 |
| BstDSI | CCRYGG | 1 cut(s) | 2182 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 107, 1110 |
| BstF5I | GGATG | 5 cut(s) | 8, 2207, 2538, 2555, 3178 |
| BstH2I | RGCGCY | 1 cut(s) | 1552 |
| BstHHI | GCGC | 1 cut(s) | 1551 |
| BstKTI | GATC | 7 cut(s) | 216, 282, 528, 626, 916, 997, 2941 |
| BstMAI | GTCTC | 3 cut(s) | 865, 1394, 2052 |
| BstMBI | GATC | 7 cut(s) | 213, 279, 525, 623, 913, 994, 2938 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 69, 1474, 1756, 2370, 3183 |
| BstNI | CCWGG | 3 cut(s) | 430, 966, 1811 |
| BstNSI | RCATGY | 2 cut(s) | 560, 1088 |
| BstSCI | CCNGG | 3 cut(s) | 428, 964, 1809 |
| BstSFI | CTRYAG | 2 cut(s) | 2214, 2543 |
| BstV1I | GCAGC | 2 cut(s) | 427, 442 |
| BstV2I | GAAGAC | 1 cut(s) | 220 |
| BstX2I | RGATCY | 2 cut(s) | 213, 2938 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2003 |
| BstYI | RGATCY | 2 cut(s) | 213, 2938 |
| BsuI | GTATCC | 1 cut(s) | 436 |
| BsuRI | GGCC | 2 cut(s) | 2256, 2441 |
| BtgI | CCRYGG | 1 cut(s) | 2182 |
| BtsCI | GGATG | 5 cut(s) | 8, 2207, 2538, 2555, 3178 |
| BtsIMutI | CAGTG | 6 cut(s) | 299, 1271, 1437, 1710, 2392, 2904 |
| BveI | ACCTGC | 2 cut(s) | 477, 1833 |
| Cac8I | GCNNGC | 8 cut(s) | 195, 484, 536, 1086, 1167, 1757, 2443, 3128 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2233 |
| CciI | TCATGA | 1 cut(s) | 3025 |
| CfoI | GCGC | 1 cut(s) | 1551 |
| Cfr10I | RCCGGY | 1 cut(s) | 534 |
| Cfr13I | GGNCC | 9 cut(s) | 97, 374, 962, 1822, 2366, 2780, 3005, 3050, 3070 |
| CsiI | ACCWGGT | 1 cut(s) | 1809 |
| Csp6I | GTAC | 6 cut(s) | 408, 414, 606, 890, 1703, 1831 |
| CviQI | GTAC | 6 cut(s) | 408, 414, 606, 890, 1703, 1831 |
| DdeI | CTNAG | 6 cut(s) | 28, 232, 1274, 1895, 2054, 2384 |
| DinI | GGCGCC | 1 cut(s) | 1550 |
| DpnI | GATC | 7 cut(s) | 215, 281, 527, 625, 915, 996, 2940 |
| DpnII | GATC | 7 cut(s) | 213, 279, 525, 623, 913, 994, 2938 |
| DraI | TTTAAA | 4 cut(s) | 813, 1198, 1617, 2343 |
| EaeI | YGGCCR | 1 cut(s) | 2439 |
| Eam1104I | CTCTTC | 5 cut(s) | 28, 450, 1590, 2178, 2612 |
| EarI | CTCTTC | 5 cut(s) | 28, 450, 1590, 2178, 2612 |
| Ecl136II | GAGCTC | 1 cut(s) | 1072 |
| Eco130I | CCWWGG | 2 cut(s) | 1227, 2182 |
| Eco147I | AGGCCT | 1 cut(s) | 2256 |
| Eco24I | GRGCYC | 1 cut(s) | 1074 |
| Eco31I | GGTCTC | 1 cut(s) | 2052 |
| Eco32I | GATATC | 2 cut(s) | 478, 2160 |
| Eco47I | GGWCC | 9 cut(s) | 97, 374, 962, 1822, 2366, 2780, 3005, 3050, 3070 |
| Eco53kI | GAGCTC | 1 cut(s) | 1072 |
| Eco57I | CTGAAG | 3 cut(s) | 49, 1614, 2790 |
| Eco88I | CYCGRG | 2 cut(s) | 1041, 3109 |
| EcoICRI | GAGCTC | 1 cut(s) | 1072 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 107, 1110 |
| EcoRII | CCWGG | 3 cut(s) | 428, 964, 1809 |
| EcoRV | GATATC | 2 cut(s) | 478, 2160 |
| EcoT14I | CCWWGG | 2 cut(s) | 1227, 2182 |
| EcoT22I | ATGCAT | 2 cut(s) | 1090, 1470 |
| EcoT38I | GRGCYC | 1 cut(s) | 1074 |
| EgeI | GGCGCC | 1 cut(s) | 1550 |
| EheI | GGCGCC | 1 cut(s) | 1550 |
| ErhI | CCWWGG | 2 cut(s) | 1227, 2182 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 780, 812, 858, 890, 2008, 2040 |
| FaqI | GGGAC | 1 cut(s) | 1498 |
| FauI | CCCGC | 1 cut(s) | 2344 |
| FauNDI | CATATG | 1 cut(s) | 2717 |
| Fnu4HI | GCNGC | 2 cut(s) | 441, 456 |
| FokI | GGATG | 4 cut(s) | 2194, 2525, 2562, 3165 |
| FriOI | GRGCYC | 1 cut(s) | 1074 |
| Fsp4HI | GCNGC | 2 cut(s) | 441, 456 |
| FspBI | CTAG | 8 cut(s) | 210, 399, 990, 1007, 1610, 2370, 2498, 2930 |
| GlaI | GCGC | 1 cut(s) | 1550 |
| GluI | GCNGC | 2 cut(s) | 441, 456 |
| GsuI | CTGGAG | 1 cut(s) | 1846 |
| HaeII | RGCGCY | 1 cut(s) | 1552 |
| HaeIII | GGCC | 2 cut(s) | 2256, 2441 |
| HapII | CCGG | 4 cut(s) | 126, 377, 535, 2438 |
| HhaI | GCGC | 1 cut(s) | 1551 |
| Hin1I | GRCGYC | 1 cut(s) | 1549 |
| Hin6I | GCGC | 1 cut(s) | 1549 |
| HinP1I | GCGC | 1 cut(s) | 1549 |
| HincII | GTYRAC | 1 cut(s) | 133 |
| HindII | GTYRAC | 1 cut(s) | 133 |
| HindIII | AAGCTT | 1 cut(s) | 1062 |
| HpaII | CCGG | 4 cut(s) | 126, 377, 535, 2438 |
| HphI | GGTGA | 5 cut(s) | 1727, 1914, 1985, 2150, 2876 |
| Hpy166II | GTNNAC | 3 cut(s) | 133, 1160, 2830 |
| Hpy8I | GTNNAC | 3 cut(s) | 133, 1160, 2830 |
| Hpy99I | CGWCG | 1 cut(s) | 3177 |
| HpyCH4III | ACNGT | 5 cut(s) | 1151, 1441, 1973, 2680, 2908 |
| HpyCH4IV | ACGT | 6 cut(s) | 37, 1411, 1426, 1534, 2413, 3172 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 69, 1474, 1756, 2370, 3183 |
| HpyF3I | CTNAG | 6 cut(s) | 28, 232, 1274, 1895, 2054, 2384 |
| HpySE526I | ACGT | 6 cut(s) | 37, 1411, 1426, 1534, 2413, 3172 |
| Hsp92I | GRCGYC | 1 cut(s) | 1549 |
| HspAI | GCGC | 1 cut(s) | 1549 |
| KasI | GGCGCC | 1 cut(s) | 1548 |
| KpnI | GGTACC | 1 cut(s) | 411 |
| KroI | GCCGGC | 1 cut(s) | 534 |
| KroNI | GCCGGC | 1 cut(s) | 536 |
| Kzo9I | GATC | 7 cut(s) | 213, 279, 525, 623, 913, 994, 2938 |
| LguI | GCTCTTC | 1 cut(s) | 450 |
| LmnI | GCTCC | 5 cut(s) | 268, 452, 1855, 2791, 3097 |
| Lsp1109I | GCAGC | 2 cut(s) | 427, 442 |
| LweI | GCATC | 3 cut(s) | 1099, 1279, 1455 |
| MabI | ACCWGGT | 1 cut(s) | 1809 |
| MaeI | CTAG | 8 cut(s) | 210, 399, 990, 1007, 1610, 2370, 2498, 2930 |
| MaeII | ACGT | 6 cut(s) | 37, 1411, 1426, 1534, 2413, 3172 |
| MaeIII | GTNAC | 7 cut(s) | 509, 1141, 1363, 1708, 1715, 2743, 2864 |
| MalI | GATC | 7 cut(s) | 215, 281, 527, 625, 915, 996, 2940 |
| MboI | GATC | 7 cut(s) | 213, 279, 525, 623, 913, 994, 2938 |
| MfeI | CAATTG | 3 cut(s) | 308, 926, 1293 |
| MflI | RGATCY | 2 cut(s) | 213, 2938 |
| MhlI | GDGCHC | 3 cut(s) | 1074, 1226, 1860 |
| Mly113I | GGCGCC | 1 cut(s) | 1549 |
| MlyI | GAGTC | 7 cut(s) | 138, 1033, 1520, 2206, 3002, 3047, 3121 |
| MmeI | TCCRAC | 6 cut(s) | 20, 556, 601, 625, 2454, 2758 |
| Mph1103I | ATGCAT | 2 cut(s) | 1090, 1470 |
| MroNI | GCCGGC | 1 cut(s) | 534 |
| MroXI | GAANNNNTTC | 4 cut(s) | 583, 795, 1500, 2505 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1383, 2192, 2952, 3027 |
| MspA1I | CMGCKG | 1 cut(s) | 1165 |
| MspI | CCGG | 4 cut(s) | 126, 377, 535, 2438 |
| MspR9I | CCNGG | 3 cut(s) | 430, 966, 1811 |
| MunI | CAATTG | 3 cut(s) | 308, 926, 1293 |
| MvaI | CCWGG | 3 cut(s) | 430, 966, 1811 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 69, 1474, 1756, 2370, 3183 |
| NaeI | GCCGGC | 1 cut(s) | 536 |
| NarI | GGCGCC | 1 cut(s) | 1549 |
| NcoI | CCATGG | 1 cut(s) | 2182 |
| NdeII | GATC | 7 cut(s) | 213, 279, 525, 623, 913, 994, 2938 |
| NgoMIV | GCCGGC | 1 cut(s) | 534 |
| NlaIV | GGNNCC | 4 cut(s) | 260, 409, 1550, 2940 |
| NmuCI | GTSAC | 4 cut(s) | 1363, 1708, 1715, 2864 |
| NsiI | ATGCAT | 2 cut(s) | 1090, 1470 |
| NspI | RCATGY | 2 cut(s) | 560, 1088 |
| NspV | TTCGAA | 2 cut(s) | 1934, 2519 |
| OliI | CACNNNNGTG | 1 cut(s) | 1383 |
| PaeI | GCATGC | 1 cut(s) | 1088 |
| PaeR7I | CTCGAG | 2 cut(s) | 1041, 3109 |
| PagI | TCATGA | 1 cut(s) | 3025 |
| PaqCI | CACCTGC | 1 cut(s) | 477 |
| PceI | AGGCCT | 1 cut(s) | 2256 |
| PciSI | GCTCTTC | 1 cut(s) | 450 |
| PdiI | GCCGGC | 1 cut(s) | 536 |
| PdmI | GAANNNNTTC | 4 cut(s) | 583, 795, 1500, 2505 |
| PfoI | TCCNGGA | 1 cut(s) | 964 |
| PkrI | GCNGC | 2 cut(s) | 442, 457 |
| PleI | GAGTC | 7 cut(s) | 137, 1033, 1519, 2205, 3001, 3046, 3120 |
| PluTI | GGCGCC | 1 cut(s) | 1552 |
| PpsI | GAGTC | 7 cut(s) | 137, 1033, 1519, 2205, 3001, 3046, 3120 |
| Ppu21I | YACGTR | 1 cut(s) | 1412 |
| PshBI | ATTAAT | 1 cut(s) | 855 |
| PsiI | TTATAA | 3 cut(s) | 699, 980, 2079 |
| Psp124BI | GAGCTC | 1 cut(s) | 1074 |
| Psp1406I | AACGTT | 2 cut(s) | 37, 1426 |
| Psp6I | CCWGG | 3 cut(s) | 428, 964, 1809 |
| PspGI | CCWGG | 3 cut(s) | 428, 964, 1809 |
| PspN4I | GGNNCC | 4 cut(s) | 260, 409, 1550, 2940 |
| PspPI | GGNCC | 9 cut(s) | 97, 374, 962, 1822, 2366, 2780, 3005, 3050, 3070 |
| PspXI | VCTCGAGB | 1 cut(s) | 3109 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 533, 565 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2233 |
| PsuI | RGATCY | 2 cut(s) | 213, 2938 |
| RsaI | GTAC | 6 cut(s) | 409, 415, 607, 891, 1704, 1832 |
| RsaNI | GTAC | 6 cut(s) | 408, 414, 606, 890, 1703, 1831 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1383, 2192, 2952, 3027 |
| SacI | GAGCTC | 1 cut(s) | 1074 |
| SapI | GCTCTTC | 1 cut(s) | 450 |
| SatI | GCNGC | 2 cut(s) | 441, 456 |
| Sau3AI | GATC | 7 cut(s) | 213, 279, 525, 623, 913, 994, 2938 |
| Sau96I | GGNCC | 9 cut(s) | 97, 374, 962, 1822, 2366, 2780, 3005, 3050, 3070 |
| ScaI | AGTACT | 1 cut(s) | 607 |
| SchI | GAGTC | 7 cut(s) | 138, 1033, 1520, 2206, 3002, 3047, 3121 |
| ScrFI | CCNGG | 3 cut(s) | 430, 966, 1811 |
| SduI | GDGCHC | 3 cut(s) | 1074, 1226, 1860 |
| SexAI | ACCWGGT | 1 cut(s) | 1809 |
| SfaNI | GCATC | 3 cut(s) | 1099, 1279, 1455 |
| SfcI | CTRYAG | 2 cut(s) | 2214, 2543 |
| SfoI | GGCGCC | 1 cut(s) | 1550 |
| Sfr274I | CTCGAG | 2 cut(s) | 1041, 3109 |
| SfuI | TTCGAA | 2 cut(s) | 1934, 2519 |
| SinI | GGWCC | 9 cut(s) | 97, 374, 962, 1822, 2366, 2780, 3005, 3050, 3070 |
| SlaI | CTCGAG | 2 cut(s) | 1041, 3109 |
| SmiI | ATTTAAAT | 1 cut(s) | 2343 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1383, 2192, 2952, 3027 |
| SmlI | CTYRAG | 7 cut(s) | 58, 263, 1041, 1871, 1949, 3109, 3142 |
| SmoI | CTYRAG | 7 cut(s) | 58, 263, 1041, 1871, 1949, 3109, 3142 |
| SphI | GCATGC | 1 cut(s) | 1088 |
| SseBI | AGGCCT | 1 cut(s) | 2256 |
| SsiI | CCGC | 5 cut(s) | 1163, 1508, 1828, 2351, 2364 |
| SspDI | GGCGCC | 1 cut(s) | 1548 |
| SspI | AATATT | 3 cut(s) | 1017, 1317, 2422 |
| SspMI | CTAG | 8 cut(s) | 210, 399, 990, 1007, 1610, 2370, 2498, 2930 |
| SstI | GAGCTC | 1 cut(s) | 1074 |
| StuI | AGGCCT | 1 cut(s) | 2256 |
| StyD4I | CCNGG | 3 cut(s) | 428, 964, 1809 |
| StyI | CCWWGG | 2 cut(s) | 1227, 2182 |
| SwaI | ATTTAAAT | 1 cut(s) | 2343 |
| TaaI | ACNGT | 5 cut(s) | 1151, 1441, 1973, 2680, 2908 |
| TaiI | ACGT | 6 cut(s) | 40, 1414, 1429, 1537, 2416, 3175 |
| TaqI | TCGA | 8 cut(s) | 973, 997, 1042, 1130, 1480, 1934, 2519, 3110 |
| TaqII | GACCGA | 3 cut(s) | 2915, 3038, 3087 |
| TatI | WGTACW | 2 cut(s) | 605, 1702 |
| TscAI | CASTG | 6 cut(s) | 306, 1271, 1444, 1717, 2392, 2911 |
| TseFI | GTSAC | 4 cut(s) | 1363, 1708, 1715, 2864 |
| TseI | GCWGC | 2 cut(s) | 440, 455 |
| Tsp45I | GTSAC | 4 cut(s) | 1363, 1708, 1715, 2864 |
| TspGWI | ACGGA | 1 cut(s) | 110 |
| TspRI | CASTG | 6 cut(s) | 306, 1271, 1444, 1717, 2392, 2911 |
| VpaK11BI | GGWCC | 9 cut(s) | 97, 374, 962, 1822, 2366, 2780, 3005, 3050, 3070 |
| VspI | ATTAAT | 1 cut(s) | 855 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 107, 1110 |
| XapI | RAATTY | 8 cut(s) | 460, 648, 704, 1245, 1260, 1618, 1847, 2344 |
| XceI | RCATGY | 2 cut(s) | 560, 1088 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3134 |
| XhoI | CTCGAG | 2 cut(s) | 1041, 3109 |
| XmnI | GAANNNNTTC | 4 cut(s) | 583, 795, 1500, 2505 |
| XspI | CTAG | 8 cut(s) | 210, 399, 990, 1007, 1610, 2370, 2498, 2930 |
| ZrmI | AGTACT | 1 cut(s) | 607 |
| Zsp2I | ATGCAT | 2 cut(s) | 1090, 1470 |