Rmu_sc0002775.1_g000017

Toll - interleukin 1 - resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002775.1
Physical Location & Seq
Reverse (-)
83431 .. 86577
3147 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002775.1_g000017.1.cds

Sequence Viewer

Length: 768 bp
atgaataaagaagaagctcttgagctctttagttggcatgcatttcaaaataattgtcctgatgccgaattgttggagctctcaagaagtgtggctacctactgtggaggtttaccactggctcttgaagttttagggtcttttctctttggaaggaaggacataagagattggaaaagcacattgaagaaattggaaaaaattcctcatggaaaaattcagagaaagctcagaataagctttgatgcaattgatgagaaccagaagaacttattcctcgatgtatcttgtttcttcattggaatggacaagaaccatgtcataaaaatactcgaggggtgtggtctttctgcagcaatagatatcagtgtcctcattcagcgttgccttgacatgtctccaagtggtatatccatttttgttacaaattataccaagctcattagctttgttgttgagccaactcatctcaccgaaataacttcacatgatgttatttggcgagtaaatttattaaacaatgagttcaatttggaaggtgatgactttgtggaggttgaagttgcaattggatccggtttcagagtgaaaaaaactggggtcagtcttgtatgggatcccaaacttatcaatgaaaatacgattgagtgtgagcctatcccgtaccaatattttccaagtgatgctgataatcaggcaggaccaagccatgagacatctgatggggaacgacctttgaaaagattgaagtttgtgatgcaggagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

255

Amino Acids

28.87

Weight (kDa)

5.16

Isoelectric Point (pI)

27.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 4 cut(s) 567, 580, 611, 624
AcsI RAATTY 3 cut(s) 201, 216, 508
AfaI GTAC 1 cut(s) 665
AflIII ACRYGT 1 cut(s) 393
AgsI TTSAA 7 cut(s) 47, 128, 187, 529, 560, 739, 748
AjuI GAANNNNNNNTTGG 2 cut(s) 552, 584
AluBI AGCT 7 cut(s) 17, 25, 79, 229, 240, 439, 447
AluI AGCT 7 cut(s) 17, 25, 79, 229, 240, 439, 447
Alw21I GWGCWC 2 cut(s) 27, 81
Alw26I GTCTC 2 cut(s) 402, 707
AlwI GGATC 4 cut(s) 567, 580, 611, 624
Ama87I CYCGRG 1 cut(s) 332
ApeKI GCWGC 1 cut(s) 353
ApoI RAATTY 3 cut(s) 201, 216, 508
ArsI GACNNNNNNTTYG 2 cut(s) 40, 72
Asp700I GAANNNNTTC 2 cut(s) 201, 272
AspS9I GGNCC 1 cut(s) 701
AsuHPI GGTGA 2 cut(s) 463, 551
AvaI CYCGRG 1 cut(s) 332
AvaII GGWCC 1 cut(s) 701
BamHI GGATCC 2 cut(s) 572, 616
BanII GRGCYC 2 cut(s) 27, 81
BarI GAAGNNNNNNTAC 2 cut(s) 79, 111
Bbv12I GWGCWC 2 cut(s) 27, 81
BbvI GCAGC 1 cut(s) 365
BccI CCATC 1 cut(s) 716
BcoDI GTCTC 2 cut(s) 402, 707
BfmI CTRYAG 1 cut(s) 351
BisI GCNGC 1 cut(s) 354
BlsI GCNGC 1 cut(s) 355
Bme18I GGWCC 1 cut(s) 701
BmeT110I CYCGRG 1 cut(s) 332
BmgT120I GGNCC 1 cut(s) 701
BmiI GGNNCC 2 cut(s) 574, 618
BmrI ACTGGG 1 cut(s) 606
BmsI GCATC 4 cut(s) 52, 235, 673, 747
BmuI ACTGGG 1 cut(s) 606
BpuEI CTTGAG 2 cut(s) 41, 67
BsaWI WCCGGW 1 cut(s) 575
Bse1I ACTGG 2 cut(s) 123, 601
BseMII CTCAG 1 cut(s) 244
BseNI ACTGG 2 cut(s) 123, 601
BseXI GCAGC 1 cut(s) 365
BsiHKAI GWGCWC 2 cut(s) 27, 81
BsiHKCI CYCGRG 1 cut(s) 332
BsiSI CCGG 1 cut(s) 576
BsmAI GTCTC 2 cut(s) 402, 707
BsoBI CYCGRG 1 cut(s) 332
Bsp1286I GDGCHC 2 cut(s) 27, 81
Bsp143I GATC 2 cut(s) 572, 616
BspCNI CTCAG 1 cut(s) 243
BspLI GGNNCC 2 cut(s) 574, 618
BspMAI CTGCAG 1 cut(s) 355
BspPI GGATC 4 cut(s) 567, 580, 611, 624
BsrI ACTGG 2 cut(s) 123, 601
BssMI GATC 2 cut(s) 572, 616
Bst4CI ACNGT 1 cut(s) 104
BstC8I GCNNGC 1 cut(s) 39
BstDEI CTNAG 1 cut(s) 230
BstKTI GATC 2 cut(s) 575, 619
BstMAI GTCTC 2 cut(s) 402, 707
BstMBI GATC 2 cut(s) 572, 616
BstNSI RCATGY 2 cut(s) 41, 397
BstSFI CTRYAG 1 cut(s) 351
BstV1I GCAGC 1 cut(s) 365
BstX2I RGATCY 2 cut(s) 572, 616
BstYI RGATCY 2 cut(s) 572, 616
BtsIMutI CAGTG 2 cut(s) 116, 373
Cac8I GCNNGC 1 cut(s) 39
Cfr13I GGNCC 1 cut(s) 701
Csp6I GTAC 1 cut(s) 664
CspCI CAANNNNNGTGG 2 cut(s) 72, 107
CviAII CATG 6 cut(s) 38, 209, 317, 394, 488, 710
CviQI GTAC 1 cut(s) 664
DdeI CTNAG 1 cut(s) 230
DpnI GATC 2 cut(s) 574, 618
DpnII GATC 2 cut(s) 572, 616
Ecl136II GAGCTC 2 cut(s) 25, 79
Eco24I GRGCYC 2 cut(s) 27, 81
Eco32I GATATC 1 cut(s) 364
Eco47I GGWCC 1 cut(s) 701
Eco53kI GAGCTC 2 cut(s) 25, 79
Eco88I CYCGRG 1 cut(s) 332
EcoICRI GAGCTC 2 cut(s) 25, 79
EcoRV GATATC 1 cut(s) 364
EcoT22I ATGCAT 1 cut(s) 43
EcoT38I GRGCYC 2 cut(s) 27, 81
FaeI CATG 6 cut(s) 41, 212, 320, 397, 491, 713
FalI AAGNNNNNCTT 1 cut(s) 35
FatI CATG 6 cut(s) 37, 208, 316, 393, 487, 709
Fnu4HI GCNGC 1 cut(s) 354
FriOI GRGCYC 2 cut(s) 27, 81
Fsp4HI GCNGC 1 cut(s) 354
GluI GCNGC 1 cut(s) 354
HapII CCGG 1 cut(s) 576
Hin1II CATG 6 cut(s) 41, 212, 320, 397, 491, 713
HindIII AAGCTT 1 cut(s) 238
HpaII CCGG 1 cut(s) 576
HphI GGTGA 2 cut(s) 463, 551
Hpy166II GTNNAC 1 cut(s) 113
Hpy188I TCNGA 4 cut(s) 222, 233, 584, 721
Hpy188III TCNNGA 4 cut(s) 20, 59, 84, 125
Hpy8I GTNNAC 1 cut(s) 113
HpyAV CCTTC 3 cut(s) 147, 151, 530
HpyCH4III ACNGT 1 cut(s) 104
HpyCH4V TGCA 5 cut(s) 41, 248, 353, 566, 760
HpyF3I CTNAG 1 cut(s) 230
Hsp92II CATG 6 cut(s) 41, 212, 320, 397, 491, 713
Kzo9I GATC 2 cut(s) 572, 616
LmnI GCTCC 1 cut(s) 76
LpnPI CCDG 8 cut(s) 72, 104, 275, 582, 589, 680, 684, 746
Lsp1109I GCAGC 1 cut(s) 365
LweI GCATC 4 cut(s) 52, 235, 673, 747
MaeIII GTNAC 1 cut(s) 421
MalI GATC 2 cut(s) 574, 618
MboI GATC 2 cut(s) 572, 616
MboII GAAGA 4 cut(s) 23, 199, 277, 286
MfeI CAATTG 2 cut(s) 249, 567
MflI RGATCY 2 cut(s) 572, 616
MhlI GDGCHC 2 cut(s) 27, 81
MmeI TCCRAC 1 cut(s) 54
MnlI CCTC 6 cut(s) 101, 216, 287, 328, 383, 547
Mph1103I ATGCAT 1 cut(s) 43
MroXI GAANNNNTTC 2 cut(s) 201, 272
MseI TTAA 1 cut(s) 515
MslI CAYNNNNRTG 1 cut(s) 302
MspI CCGG 1 cut(s) 576
MunI CAATTG 2 cut(s) 249, 567
NdeII GATC 2 cut(s) 572, 616
NlaIII CATG 6 cut(s) 41, 212, 320, 397, 491, 713
NlaIV GGNNCC 2 cut(s) 574, 618
NsiI ATGCAT 1 cut(s) 43
NspI RCATGY 2 cut(s) 41, 397
PaeI GCATGC 1 cut(s) 41
PaeR7I CTCGAG 1 cut(s) 332
PciI ACATGT 1 cut(s) 393
PdmI GAANNNNTTC 2 cut(s) 201, 272
PkrI GCNGC 1 cut(s) 355
PscI ACATGT 1 cut(s) 393
Psp124BI GAGCTC 2 cut(s) 27, 81
PspN4I GGNNCC 2 cut(s) 574, 618
PspPI GGNCC 1 cut(s) 701
PspXI VCTCGAGB 1 cut(s) 332
PstI CTGCAG 1 cut(s) 355
PsuI RGATCY 2 cut(s) 572, 616
RsaI GTAC 1 cut(s) 665
RsaNI GTAC 1 cut(s) 664
RseI CAYNNNNRTG 1 cut(s) 302
SacI GAGCTC 2 cut(s) 27, 81
SaqAI TTAA 1 cut(s) 515
SatI GCNGC 1 cut(s) 354
Sau3AI GATC 2 cut(s) 572, 616
Sau96I GGNCC 1 cut(s) 701
SduI GDGCHC 2 cut(s) 27, 81
SfaNI GCATC 4 cut(s) 52, 235, 673, 747
SfcI CTRYAG 1 cut(s) 351
Sfr274I CTCGAG 1 cut(s) 332
SinI GGWCC 1 cut(s) 701
SlaI CTCGAG 1 cut(s) 332
SmiMI CAYNNNNRTG 1 cut(s) 302
SmlI CTYRAG 3 cut(s) 20, 82, 332
SmoI CTYRAG 3 cut(s) 20, 82, 332
SphI GCATGC 1 cut(s) 41
SspI AATATT 1 cut(s) 671
SstI GAGCTC 2 cut(s) 27, 81
TaaI ACNGT 1 cut(s) 104
TaqI TCGA 2 cut(s) 279, 333
Tru1I TTAA 1 cut(s) 515
Tru9I TTAA 1 cut(s) 515
TscAI CASTG 2 cut(s) 123, 373
TseI GCWGC 1 cut(s) 353
TspDTI ATGAA 3 cut(s) 17, 286, 648
TspRI CASTG 2 cut(s) 123, 373
VpaK11BI GGWCC 1 cut(s) 701
XapI RAATTY 3 cut(s) 201, 216, 508
XceI RCATGY 2 cut(s) 41, 397
XhoI CTCGAG 1 cut(s) 332
XmnI GAANNNNTTC 2 cut(s) 201, 272
Zsp2I ATGCAT 1 cut(s) 43
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.