TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 3 - 71 | 1.9e-07 | NB-ARC domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 101 |
| AcoI | YGGCCR | 1 cut(s) | 301 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 310 |
| AflIII | ACRYGT | 1 cut(s) | 72 |
| AgsI | TTSAA | 1 cut(s) | 293 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 332, 364 |
| AluBI | AGCT | 5 cut(s) | 182, 190, 244, 287, 405 |
| AluI | AGCT | 5 cut(s) | 182, 190, 244, 287, 405 |
| Alw21I | GWGCWC | 2 cut(s) | 192, 246 |
| AoxI | GGCC | 1 cut(s) | 301 |
| AspS9I | GGNCC | 1 cut(s) | 40 |
| AvaII | GGWCC | 1 cut(s) | 40 |
| BanII | GRGCYC | 2 cut(s) | 192, 246 |
| Bbv12I | GWGCWC | 2 cut(s) | 192, 246 |
| BccI | CCATC | 1 cut(s) | 404 |
| BceAI | ACGGC | 1 cut(s) | 288 |
| BfaI | CTAG | 2 cut(s) | 83, 284 |
| Bme18I | GGWCC | 1 cut(s) | 40 |
| BmgT120I | GGNCC | 1 cut(s) | 40 |
| Bsa29I | ATCGAT | 1 cut(s) | 424 |
| BsaAI | YACGTR | 1 cut(s) | 419 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 310 |
| BseCI | ATCGAT | 1 cut(s) | 424 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 310 |
| BshFI | GGCC | 1 cut(s) | 303 |
| BshVI | ATCGAT | 1 cut(s) | 424 |
| BsiHKAI | GWGCWC | 2 cut(s) | 192, 246 |
| BslFI | GGGAC | 1 cut(s) | 207 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 310 |
| BsmFI | GGGAC | 1 cut(s) | 207 |
| BsnI | GGCC | 1 cut(s) | 303 |
| Bsp1286I | GDGCHC | 2 cut(s) | 192, 246 |
| Bsp143I | GATC | 3 cut(s) | 373, 421, 425 |
| BspANI | GGCC | 1 cut(s) | 303 |
| BspDI | ATCGAT | 1 cut(s) | 424 |
| BspHI | TCATGA | 1 cut(s) | 385 |
| BssMI | GATC | 3 cut(s) | 373, 421, 425 |
| BstBAI | YACGTR | 1 cut(s) | 419 |
| BstC8I | GCNNGC | 2 cut(s) | 204, 246 |
| BstDEI | CTNAG | 1 cut(s) | 194 |
| BstKTI | GATC | 3 cut(s) | 376, 424, 428 |
| BstMBI | GATC | 3 cut(s) | 373, 421, 425 |
| BstNSI | RCATGY | 2 cut(s) | 76, 206 |
| Bsu15I | ATCGAT | 1 cut(s) | 424 |
| BsuRI | GGCC | 1 cut(s) | 303 |
| BsuTUI | ATCGAT | 1 cut(s) | 424 |
| Cac8I | GCNNGC | 2 cut(s) | 204, 246 |
| CciI | TCATGA | 1 cut(s) | 385 |
| Cfr13I | GGNCC | 1 cut(s) | 40 |
| ClaI | ATCGAT | 1 cut(s) | 424 |
| CviAII | CATG | 5 cut(s) | 68, 73, 203, 386, 429 |
| CviJI | RGCY | 7 cut(s) | 182, 190, 244, 287, 303, 314, 405 |
| CviKI_1 | RGCY | 7 cut(s) | 182, 190, 244, 287, 303, 314, 405 |
| DdeI | CTNAG | 1 cut(s) | 194 |
| DpnI | GATC | 3 cut(s) | 375, 423, 427 |
| DpnII | GATC | 3 cut(s) | 373, 421, 425 |
| EaeI | YGGCCR | 1 cut(s) | 301 |
| Ecl136II | GAGCTC | 2 cut(s) | 190, 244 |
| Eco24I | GRGCYC | 2 cut(s) | 192, 246 |
| Eco47I | GGWCC | 1 cut(s) | 40 |
| Eco53kI | GAGCTC | 2 cut(s) | 190, 244 |
| EcoICRI | GAGCTC | 2 cut(s) | 190, 244 |
| EcoT38I | GRGCYC | 2 cut(s) | 192, 246 |
| FaeI | CATG | 5 cut(s) | 71, 76, 206, 389, 432 |
| FaqI | GGGAC | 1 cut(s) | 207 |
| FatI | CATG | 5 cut(s) | 67, 72, 202, 385, 428 |
| FauNDI | CATATG | 1 cut(s) | 335 |
| FriOI | GRGCYC | 2 cut(s) | 192, 246 |
| FspBI | CTAG | 2 cut(s) | 83, 284 |
| HaeIII | GGCC | 1 cut(s) | 303 |
| Hin1II | CATG | 5 cut(s) | 71, 76, 206, 389, 432 |
| HindIII | AAGCTT | 1 cut(s) | 180 |
| Hpy166II | GTNNAC | 1 cut(s) | 40 |
| Hpy188III | TCNNGA | 4 cut(s) | 224, 290, 371, 386 |
| Hpy8I | GTNNAC | 1 cut(s) | 40 |
| Hpy99I | CGWCG | 1 cut(s) | 230 |
| HpyCH4IV | ACGT | 1 cut(s) | 418 |
| HpyF3I | CTNAG | 1 cut(s) | 194 |
| HpySE526I | ACGT | 1 cut(s) | 418 |
| Hsp92II | CATG | 5 cut(s) | 71, 76, 206, 389, 432 |
| Kzo9I | GATC | 3 cut(s) | 373, 421, 425 |
| LmnI | GCTCC | 1 cut(s) | 195 |
| LpnPI | CCDG | 1 cut(s) | 384 |
| MaeI | CTAG | 2 cut(s) | 83, 284 |
| MaeII | ACGT | 1 cut(s) | 418 |
| MaeIII | GTNAC | 1 cut(s) | 414 |
| MalI | GATC | 3 cut(s) | 375, 423, 427 |
| MboI | GATC | 3 cut(s) | 373, 421, 425 |
| MboII | GAAGA | 1 cut(s) | 242 |
| MhlI | GDGCHC | 2 cut(s) | 192, 246 |
| MluCI | AATT | 5 cut(s) | 44, 53, 356, 381, 398 |
| MnlI | CCTC | 2 cut(s) | 228, 266 |
| MseI | TTAA | 2 cut(s) | 396, 401 |
| NdeI | CATATG | 1 cut(s) | 335 |
| NdeII | GATC | 3 cut(s) | 373, 421, 425 |
| NlaIII | CATG | 5 cut(s) | 71, 76, 206, 389, 432 |
| NspI | RCATGY | 2 cut(s) | 76, 206 |
| PaeI | GCATGC | 1 cut(s) | 206 |
| PagI | TCATGA | 1 cut(s) | 385 |
| PciI | ACATGT | 1 cut(s) | 72 |
| Ppu21I | YACGTR | 1 cut(s) | 419 |
| PscI | ACATGT | 1 cut(s) | 72 |
| PsiI | TTATAA | 1 cut(s) | 101 |
| Psp124BI | GAGCTC | 2 cut(s) | 192, 246 |
| PspPI | GGNCC | 1 cut(s) | 40 |
| SacI | GAGCTC | 2 cut(s) | 192, 246 |
| SaqAI | TTAA | 2 cut(s) | 396, 401 |
| Sau3AI | GATC | 3 cut(s) | 373, 421, 425 |
| Sau96I | GGNCC | 1 cut(s) | 40 |
| SduI | GDGCHC | 2 cut(s) | 192, 246 |
| SetI | ASST | 9 cut(s) | 9, 141, 184, 192, 246, 289, 407, 421, 440 |
| SinI | GGWCC | 1 cut(s) | 40 |
| SphI | GCATGC | 1 cut(s) | 206 |
| Sse9I | AATT | 5 cut(s) | 44, 53, 356, 381, 398 |
| SspI | AATATT | 1 cut(s) | 367 |
| SspMI | CTAG | 2 cut(s) | 83, 284 |
| SstI | GAGCTC | 2 cut(s) | 192, 246 |
| TaiI | ACGT | 1 cut(s) | 421 |
| TaqI | TCGA | 2 cut(s) | 376, 424 |
| TasI | AATT | 5 cut(s) | 44, 53, 356, 381, 398 |
| Tru1I | TTAA | 2 cut(s) | 396, 401 |
| Tru9I | TTAA | 2 cut(s) | 396, 401 |
| TspDTI | ATGAA | 4 cut(s) | 17, 129, 374, 402 |
| VpaK11BI | GGWCC | 1 cut(s) | 40 |
| XceI | RCATGY | 2 cut(s) | 76, 206 |
| XspI | CTAG | 2 cut(s) | 83, 284 |