RchiOBHm_Chr7g0231201
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
54762753 .. 54763413
661 bp
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UTR
Exon/CDS
Intron
PRQ20718

Sequence Viewer

Length: 306 bp
ATGGCATCACAATTGTCAGAAGCAGAAGAGCGCGAGCGGGGTTTCAATGGCAGGGGGCGTTGGAATCAAGTTCGGTCTCTTACAGATGCCAAAATTTTGATGAATCATTTGTTCAACTTAGCTTCTTCCTCCAGGTGCCTGTTACGAGATAAAGAAGTTGCATACAGAGAGAAGGATTTGGAAATAAGAGATTTGAAGGAAAAAGTTGTAAGCCTCAGTAGTTCGCTCAGGAAGTTGGAGAATAAGAATGCTCAACTTATGCATCAGAACTCAGCGTTGAAGAAATCTGAAAATGGACACAAGTAA

Protein Analysis

101

Amino Acids

11.67

Weight (kDa)

9.77

Isoelectric Point (pI)

47.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018635)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 135
AccBSI CCGCTC 1 cut(s) 37
AccII CGCG 1 cut(s) 33
AciI CCGC 1 cut(s) 37
AcsI RAATTY 1 cut(s) 93
AgsI TTSAA 4 cut(s) 46, 115, 196, 280
AjnI CCWGG 1 cut(s) 131
AluBI AGCT 1 cut(s) 122
AluI AGCT 1 cut(s) 122
Alw26I GTCTC 1 cut(s) 81
ApoI RAATTY 1 cut(s) 93
AspLEI GCGC 1 cut(s) 33
BanI GGYRCC 1 cut(s) 135
BciT130I CCWGG 1 cut(s) 133
BcoDI GTCTC 1 cut(s) 81
Bme1390I CCNGG 1 cut(s) 133
BmiI GGNNCC 1 cut(s) 137
BmrFI CCNGG 1 cut(s) 133
BmsI GCATC 3 cut(s) 14, 76, 271
BpmI CTGGAG 1 cut(s) 115
Bpu10I CCTNAGC 1 cut(s) 227
BsaI GGTCTC 1 cut(s) 81
BseBI CCWGG 1 cut(s) 133
BseMII CTCAG 3 cut(s) 229, 241, 285
Bsh1236I CGCG 1 cut(s) 33
BshNI GGYRCC 1 cut(s) 135
BsmAI GTCTC 1 cut(s) 81
BsmI GAATGC 1 cut(s) 253
Bso31I GGTCTC 1 cut(s) 81
BspACI CCGC 1 cut(s) 37
BspCNI CTCAG 3 cut(s) 228, 240, 284
BspFNI CGCG 1 cut(s) 33
BspLI GGNNCC 1 cut(s) 137
BspQI GCTCTTC 1 cut(s) 21
BspT107I GGYRCC 1 cut(s) 135
BspTNI GGTCTC 1 cut(s) 81
BsrBI CCGCTC 1 cut(s) 37
Bst2UI CCWGG 1 cut(s) 133
Bst6I CTCTTC 1 cut(s) 21
BstC8I GCNNGC 1 cut(s) 35
BstDEI CTNAG 4 cut(s) 118, 215, 227, 271
BstFNI CGCG 1 cut(s) 33
BstHHI GCGC 1 cut(s) 33
BstMAI GTCTC 1 cut(s) 81
BstNI CCWGG 1 cut(s) 133
BstSCI CCNGG 1 cut(s) 131
BstUI CGCG 1 cut(s) 33
Cac8I GCNNGC 1 cut(s) 35
CfoI GCGC 1 cut(s) 33
CviJI RGCY 2 cut(s) 122, 213
CviKI_1 RGCY 2 cut(s) 122, 213
DdeI CTNAG 4 cut(s) 118, 215, 227, 271
Eam1104I CTCTTC 1 cut(s) 21
EarI CTCTTC 1 cut(s) 21
Eco31I GGTCTC 1 cut(s) 81
EcoRII CCWGG 1 cut(s) 131
EcoT22I ATGCAT 1 cut(s) 264
FaiI YATR 2 cut(s) 163, 260
FauI CCCGC 1 cut(s) 30
GlaI GCGC 1 cut(s) 32
GsuI CTGGAG 1 cut(s) 115
HhaI GCGC 1 cut(s) 33
Hin6I GCGC 1 cut(s) 31
HinP1I GCGC 1 cut(s) 31
HinfI GANTC 2 cut(s) 64, 103
Hpy188I TCNGA 3 cut(s) 19, 267, 289
Hpy188III TCNNGA 1 cut(s) 229
HpyAV CCTTC 2 cut(s) 166, 190
HpyCH4V TGCA 2 cut(s) 161, 262
HpyF3I CTNAG 4 cut(s) 118, 215, 227, 271
HspAI GCGC 1 cut(s) 31
LguI GCTCTTC 1 cut(s) 21
LpnPI CCDG 5 cut(s) 37, 118, 145, 152, 214
LweI GCATC 3 cut(s) 14, 76, 271
MaeIII GTNAC 1 cut(s) 141
MbiI CCGCTC 1 cut(s) 37
MboII GAAGA 3 cut(s) 38, 117, 292
MfeI CAATTG 1 cut(s) 11
MluCI AATT 2 cut(s) 11, 93
MmeI TCCRAC 2 cut(s) 41, 216
MnlI CCTC 2 cut(s) 139, 224
Mph1103I ATGCAT 1 cut(s) 264
MspR9I CCNGG 1 cut(s) 133
MunI CAATTG 1 cut(s) 11
Mva1269I GAATGC 1 cut(s) 253
MvaI CCWGG 1 cut(s) 133
MvnI CGCG 1 cut(s) 33
NlaIV GGNNCC 1 cut(s) 137
NsiI ATGCAT 1 cut(s) 264
PciSI GCTCTTC 1 cut(s) 21
PctI GAATGC 1 cut(s) 253
PfeI GAWTC 2 cut(s) 64, 103
Psp6I CCWGG 1 cut(s) 131
PspGI CCWGG 1 cut(s) 131
PspN4I GGNNCC 1 cut(s) 137
SapI GCTCTTC 1 cut(s) 21
ScrFI CCNGG 1 cut(s) 133
SetI ASST 2 cut(s) 124, 137
SfaNI GCATC 3 cut(s) 14, 76, 271
Sse9I AATT 2 cut(s) 11, 93
SsiI CCGC 1 cut(s) 37
StyD4I CCNGG 1 cut(s) 131
TaqII GACCGA 1 cut(s) 63
TasI AATT 2 cut(s) 11, 93
TfiI GAWTC 2 cut(s) 64, 103
TspDTI ATGAA 1 cut(s) 116
XapI RAATTY 1 cut(s) 93
Zsp2I ATGCAT 1 cut(s) 264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.