RchiOBHm_Chr7g0236521
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
61263732 .. 61264180
449 bp
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UTR
Exon/CDS
Intron
PRQ21196

Sequence Viewer

Length: 153 bp
ATGATGGCCAAGGAAAGAACCAAGCTAATAGAAGAACAACGTAATTTAAGTGATTCCTCAGAAATAATGTCTCCTGGTGCAAGAAATTCAAGGATTTTTGCACTTGAAAACATGCTTGCTACTTCTTCTAGCACCATGGTATCTACGGCATGA

Protein Analysis

50

Amino Acids

5.52

Weight (kDa)

6.12

Isoelectric Point (pI)

76.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018635)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 6
AcsI RAATTY 1 cut(s) 85
AgsI TTSAA 2 cut(s) 90, 107
AjnI CCWGG 1 cut(s) 73
AluBI AGCT 1 cut(s) 25
AluI AGCT 1 cut(s) 25
Alw26I GTCTC 1 cut(s) 75
AoxI GGCC 1 cut(s) 6
ApoI RAATTY 1 cut(s) 85
BaeI ACNNNNGTAYC 1 cut(s) 123
BalI TGGCCA 1 cut(s) 8
BciT130I CCWGG 1 cut(s) 75
BcoDI GTCTC 1 cut(s) 75
BfaI CTAG 1 cut(s) 129
Bme1390I CCNGG 1 cut(s) 75
BmrFI CCNGG 1 cut(s) 75
BsaJI CCNNGG 2 cut(s) 9, 135
BseBI CCWGG 1 cut(s) 75
BseDI CCNNGG 2 cut(s) 9, 135
BseMII CTCAG 1 cut(s) 72
BshFI GGCC 1 cut(s) 8
BsmAI GTCTC 1 cut(s) 75
BsnI GGCC 1 cut(s) 8
Bsp19I CCATGG 1 cut(s) 135
BspANI GGCC 1 cut(s) 8
BspCNI CTCAG 1 cut(s) 71
BssECI CCNNGG 2 cut(s) 9, 135
BssT1I CCWWGG 2 cut(s) 9, 135
Bst2UI CCWGG 1 cut(s) 75
BstC8I GCNNGC 1 cut(s) 117
BstDEI CTNAG 1 cut(s) 58
BstDSI CCRYGG 1 cut(s) 135
BstMAI GTCTC 1 cut(s) 75
BstNI CCWGG 1 cut(s) 75
BstNSI RCATGY 1 cut(s) 115
BstSCI CCNGG 1 cut(s) 73
BsuRI GGCC 1 cut(s) 8
BtgI CCRYGG 1 cut(s) 135
Cac8I GCNNGC 1 cut(s) 117
CviAII CATG 3 cut(s) 112, 136, 150
CviJI RGCY 2 cut(s) 8, 25
CviKI_1 RGCY 2 cut(s) 8, 25
DdeI CTNAG 1 cut(s) 58
EaeI YGGCCR 1 cut(s) 6
Eco130I CCWWGG 2 cut(s) 9, 135
EcoRII CCWGG 1 cut(s) 73
EcoT14I CCWWGG 2 cut(s) 9, 135
ErhI CCWWGG 2 cut(s) 9, 135
FaeI CATG 3 cut(s) 115, 139, 153
FaiI YATR 3 cut(s) 113, 137, 151
FatI CATG 3 cut(s) 111, 135, 149
FspBI CTAG 1 cut(s) 129
FspEI CC 9 cut(s) 22, 34, 60, 70, 76, 87, 122, 131, 148
HaeIII GGCC 1 cut(s) 8
Hin1II CATG 3 cut(s) 115, 139, 153
HinfI GANTC 1 cut(s) 53
Hpy188I TCNGA 1 cut(s) 61
HpyCH4IV ACGT 1 cut(s) 40
HpyCH4V TGCA 2 cut(s) 80, 101
HpyF3I CTNAG 1 cut(s) 58
HpySE526I ACGT 1 cut(s) 40
Hsp92II CATG 3 cut(s) 115, 139, 153
LpnPI CCDG 2 cut(s) 60, 87
MaeI CTAG 1 cut(s) 129
MaeII ACGT 1 cut(s) 40
MboII GAAGA 2 cut(s) 44, 117
MlsI TGGCCA 1 cut(s) 8
MluCI AATT 2 cut(s) 43, 85
MluNI TGGCCA 1 cut(s) 8
MnlI CCTC 1 cut(s) 67
Mox20I TGGCCA 1 cut(s) 8
MscI TGGCCA 1 cut(s) 8
MseI TTAA 1 cut(s) 47
Msp20I TGGCCA 1 cut(s) 8
MspR9I CCNGG 1 cut(s) 75
MvaI CCWGG 1 cut(s) 75
NcoI CCATGG 1 cut(s) 135
NlaIII CATG 3 cut(s) 115, 139, 153
NspI RCATGY 1 cut(s) 115
PfeI GAWTC 1 cut(s) 53
Psp6I CCWGG 1 cut(s) 73
PspGI CCWGG 1 cut(s) 73
SaqAI TTAA 1 cut(s) 47
ScrFI CCNGG 1 cut(s) 75
SetI ASST 2 cut(s) 27, 43
Sse9I AATT 2 cut(s) 43, 85
SspMI CTAG 1 cut(s) 129
StyD4I CCNGG 1 cut(s) 73
StyI CCWWGG 2 cut(s) 9, 135
TaiI ACGT 1 cut(s) 43
TasI AATT 2 cut(s) 43, 85
TfiI GAWTC 1 cut(s) 53
Tru1I TTAA 1 cut(s) 47
Tru9I TTAA 1 cut(s) 47
XapI RAATTY 1 cut(s) 85
XceI RCATGY 1 cut(s) 115
XspI CTAG 1 cut(s) 129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.