Belongs to the 'GDSL' lipolytic enzyme family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0231861 RchiOBHm_Chr7g0231981 |
| rosa_multiflora | Rmu_sc0003385.1_g000003 |
| rosa_samantha | Rh1BG185100 Rh1DG073400 Rh1DG214900 Rh5CG209300 Rh6CG200000 Rh7BG397200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 194 |
| AfaI | GTAC | 1 cut(s) | 7 |
| AgsI | TTSAA | 2 cut(s) | 118, 134 |
| AjnI | CCWGG | 2 cut(s) | 31, 123 |
| AluBI | AGCT | 5 cut(s) | 19, 25, 143, 158, 183 |
| AluI | AGCT | 5 cut(s) | 19, 25, 143, 158, 183 |
| Alw26I | GTCTC | 1 cut(s) | 103 |
| ApeKI | GCWGC | 2 cut(s) | 16, 143 |
| AsuNHI | GCTAGC | 1 cut(s) | 139 |
| BbvI | GCAGC | 2 cut(s) | 28, 130 |
| BciT130I | CCWGG | 2 cut(s) | 33, 125 |
| BcoDI | GTCTC | 1 cut(s) | 103 |
| BfaI | CTAG | 1 cut(s) | 140 |
| BisI | GCNGC | 3 cut(s) | 17, 144, 194 |
| BlsI | GCNGC | 3 cut(s) | 18, 145, 195 |
| Bme1390I | CCNGG | 2 cut(s) | 33, 125 |
| BmiI | GGNNCC | 1 cut(s) | 30 |
| BmrFI | CCNGG | 2 cut(s) | 33, 125 |
| BmsI | GCATC | 1 cut(s) | 161 |
| BmtI | GCTAGC | 1 cut(s) | 143 |
| BpmI | CTGGAG | 3 cut(s) | 41, 47, 54 |
| BsaI | GGTCTC | 1 cut(s) | 103 |
| BsaJI | CCNNGG | 1 cut(s) | 123 |
| BseBI | CCWGG | 2 cut(s) | 33, 125 |
| BseDI | CCNNGG | 1 cut(s) | 123 |
| BseMII | CTCAG | 1 cut(s) | 116 |
| BseRI | GAGGAG | 1 cut(s) | 150 |
| BseXI | GCAGC | 2 cut(s) | 28, 130 |
| BsmAI | GTCTC | 1 cut(s) | 103 |
| Bso31I | GGTCTC | 1 cut(s) | 103 |
| BspACI | CCGC | 1 cut(s) | 194 |
| BspCNI | CTCAG | 1 cut(s) | 115 |
| BspLI | GGNNCC | 1 cut(s) | 30 |
| BspOI | GCTAGC | 1 cut(s) | 143 |
| BspQI | GCTCTTC | 1 cut(s) | 135 |
| BspTNI | GGTCTC | 1 cut(s) | 103 |
| BssECI | CCNNGG | 1 cut(s) | 123 |
| Bst2UI | CCWGG | 2 cut(s) | 33, 125 |
| Bst6I | CTCTTC | 1 cut(s) | 135 |
| BstC8I | GCNNGC | 1 cut(s) | 141 |
| BstDEI | CTNAG | 1 cut(s) | 102 |
| BstMAI | GTCTC | 1 cut(s) | 103 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 22, 149, 180, 202 |
| BstNI | CCWGG | 2 cut(s) | 33, 125 |
| BstSCI | CCNGG | 2 cut(s) | 31, 123 |
| BstV1I | GCAGC | 2 cut(s) | 28, 130 |
| Cac8I | GCNNGC | 1 cut(s) | 141 |
| Csp6I | GTAC | 1 cut(s) | 6 |
| CviAII | CATG | 1 cut(s) | 213 |
| CviJI | RGCY | 9 cut(s) | 19, 25, 31, 41, 122, 128, 143, 158, 183 |
| CviKI_1 | RGCY | 9 cut(s) | 19, 25, 31, 41, 122, 128, 143, 158, 183 |
| CviQI | GTAC | 1 cut(s) | 6 |
| DdeI | CTNAG | 1 cut(s) | 102 |
| Eam1104I | CTCTTC | 1 cut(s) | 135 |
| EarI | CTCTTC | 1 cut(s) | 135 |
| Eco31I | GGTCTC | 1 cut(s) | 103 |
| EcoRII | CCWGG | 2 cut(s) | 31, 123 |
| FaeI | CATG | 1 cut(s) | 216 |
| FaiI | YATR | 2 cut(s) | 203, 214 |
| FatI | CATG | 1 cut(s) | 212 |
| Fnu4HI | GCNGC | 3 cut(s) | 17, 144, 194 |
| Fsp4HI | GCNGC | 3 cut(s) | 17, 144, 194 |
| FspBI | CTAG | 1 cut(s) | 140 |
| GluI | GCNGC | 3 cut(s) | 17, 144, 194 |
| GsuI | CTGGAG | 3 cut(s) | 41, 47, 54 |
| Hin1II | CATG | 1 cut(s) | 216 |
| HinfI | GANTC | 1 cut(s) | 91 |
| HpyCH4V | TGCA | 2 cut(s) | 62, 205 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 22, 149, 180, 202 |
| HpyF3I | CTNAG | 1 cut(s) | 102 |
| Hsp92II | CATG | 1 cut(s) | 216 |
| LguI | GCTCTTC | 1 cut(s) | 135 |
| LmnI | GCTCC | 3 cut(s) | 22, 28, 163 |
| LpnPI | CCDG | 8 cut(s) | 5, 11, 18, 45, 80, 110, 137, 203 |
| Lsp1109I | GCAGC | 2 cut(s) | 28, 130 |
| LweI | GCATC | 1 cut(s) | 161 |
| MaeI | CTAG | 1 cut(s) | 140 |
| MboII | GAAGA | 1 cut(s) | 122 |
| MfeI | CAATTG | 1 cut(s) | 134 |
| MluCI | AATT | 4 cut(s) | 9, 113, 134, 198 |
| MmeI | TCCRAC | 1 cut(s) | 77 |
| MnlI | CCTC | 2 cut(s) | 29, 171 |
| MspA1I | CMGCKG | 1 cut(s) | 19 |
| MspR9I | CCNGG | 2 cut(s) | 33, 125 |
| MunI | CAATTG | 1 cut(s) | 134 |
| MvaI | CCWGG | 2 cut(s) | 33, 125 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 22, 149, 180, 202 |
| NheI | GCTAGC | 1 cut(s) | 139 |
| NlaIII | CATG | 1 cut(s) | 216 |
| NlaIV | GGNNCC | 1 cut(s) | 30 |
| PciSI | GCTCTTC | 1 cut(s) | 135 |
| PfeI | GAWTC | 1 cut(s) | 91 |
| PkrI | GCNGC | 3 cut(s) | 18, 145, 195 |
| Psp6I | CCWGG | 2 cut(s) | 31, 123 |
| PspGI | CCWGG | 2 cut(s) | 31, 123 |
| PspN4I | GGNNCC | 1 cut(s) | 30 |
| PvuII | CAGCTG | 1 cut(s) | 19 |
| RsaI | GTAC | 1 cut(s) | 7 |
| RsaNI | GTAC | 1 cut(s) | 6 |
| SapI | GCTCTTC | 1 cut(s) | 135 |
| SatI | GCNGC | 3 cut(s) | 17, 144, 194 |
| ScrFI | CCNGG | 2 cut(s) | 33, 125 |
| SetI | ASST | 6 cut(s) | 21, 27, 99, 145, 160, 185 |
| SfaNI | GCATC | 1 cut(s) | 161 |
| Sse9I | AATT | 4 cut(s) | 9, 113, 134, 198 |
| SsiI | CCGC | 1 cut(s) | 194 |
| SspMI | CTAG | 1 cut(s) | 140 |
| StyD4I | CCNGG | 2 cut(s) | 31, 123 |
| TasI | AATT | 4 cut(s) | 9, 113, 134, 198 |
| TauI | GCSGC | 1 cut(s) | 196 |
| TfiI | GAWTC | 1 cut(s) | 91 |
| TseI | GCWGC | 2 cut(s) | 16, 143 |
| TspDTI | ATGAA | 1 cut(s) | 72 |
| XspI | CTAG | 1 cut(s) | 140 |