Golgi vesicle prefusion complex stabilization
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr0c11g0499521 RchiOBHm_Chr7g0236001 |
| rosa_laevigata | RLG00000001107 RLG00000001113 RLG00000001931 RLG00000030010 |
| rosa_multiflora | Rmu_sc0000755.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00225450 |
| rosa_samantha | Rh7DG437900 Rh7DG438300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 9 |
| AciI | CCGC | 1 cut(s) | 102 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AfaI | GTAC | 1 cut(s) | 182 |
| AflII | CTTAAG | 1 cut(s) | 62 |
| AluBI | AGCT | 1 cut(s) | 134 |
| AluI | AGCT | 1 cut(s) | 134 |
| AoxI | GGCC | 2 cut(s) | 3, 66 |
| ApeKI | GCWGC | 2 cut(s) | 38, 56 |
| BbvI | GCAGC | 2 cut(s) | 25, 43 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 209, 243 |
| BfrI | CTTAAG | 1 cut(s) | 62 |
| BisI | GCNGC | 2 cut(s) | 39, 57 |
| BlsI | GCNGC | 2 cut(s) | 40, 58 |
| BmcAI | AGTACT | 1 cut(s) | 182 |
| BpmI | CTGGAG | 1 cut(s) | 111 |
| BsaJI | CCNNGG | 1 cut(s) | 51 |
| Bse1I | ACTGG | 1 cut(s) | 94 |
| Bse3DI | GCAATG | 1 cut(s) | 227 |
| BseDI | CCNNGG | 1 cut(s) | 51 |
| BseMI | GCAATG | 1 cut(s) | 227 |
| BseNI | ACTGG | 1 cut(s) | 94 |
| BseXI | GCAGC | 2 cut(s) | 25, 43 |
| BsgI | GTGCAG | 1 cut(s) | 94 |
| BshFI | GGCC | 2 cut(s) | 5, 68 |
| BslFI | GGGAC | 1 cut(s) | 41 |
| BsmFI | GGGAC | 1 cut(s) | 41 |
| BsnI | GGCC | 2 cut(s) | 5, 68 |
| BspACI | CCGC | 1 cut(s) | 102 |
| BspANI | GGCC | 2 cut(s) | 5, 68 |
| BspTI | CTTAAG | 1 cut(s) | 62 |
| BsrDI | GCAATG | 1 cut(s) | 227 |
| BsrI | ACTGG | 1 cut(s) | 94 |
| BssECI | CCNNGG | 1 cut(s) | 51 |
| BssT1I | CCWWGG | 1 cut(s) | 51 |
| BstAFI | CTTAAG | 1 cut(s) | 62 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 65 |
| BstV1I | GCAGC | 2 cut(s) | 25, 43 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 167 |
| BsuRI | GGCC | 2 cut(s) | 5, 68 |
| BtsIMutI | CAGTG | 1 cut(s) | 87 |
| Csp6I | GTAC | 1 cut(s) | 181 |
| CviAII | CATG | 1 cut(s) | 79 |
| CviJI | RGCY | 5 cut(s) | 5, 56, 68, 86, 134 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 56, 68, 86, 134 |
| CviQI | GTAC | 1 cut(s) | 181 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eco130I | CCWWGG | 1 cut(s) | 51 |
| Eco147I | AGGCCT | 1 cut(s) | 68 |
| EcoT14I | CCWWGG | 1 cut(s) | 51 |
| ErhI | CCWWGG | 1 cut(s) | 51 |
| FaeI | CATG | 1 cut(s) | 82 |
| FaiI | YATR | 6 cut(s) | 80, 122, 174, 189, 242, 262 |
| FaqI | GGGAC | 1 cut(s) | 41 |
| FatI | CATG | 1 cut(s) | 78 |
| FauI | CCCGC | 1 cut(s) | 109 |
| FblI | GTMKAC | 1 cut(s) | 9 |
| Fnu4HI | GCNGC | 2 cut(s) | 39, 57 |
| Fsp4HI | GCNGC | 2 cut(s) | 39, 57 |
| GluI | GCNGC | 2 cut(s) | 39, 57 |
| GsuI | CTGGAG | 1 cut(s) | 111 |
| HaeIII | GGCC | 2 cut(s) | 5, 68 |
| Hin1II | CATG | 1 cut(s) | 82 |
| HinfI | GANTC | 2 cut(s) | 93, 226 |
| Hpy166II | GTNNAC | 1 cut(s) | 10 |
| Hpy188I | TCNGA | 1 cut(s) | 154 |
| Hpy8I | GTNNAC | 1 cut(s) | 10 |
| HpyAV | CCTTC | 1 cut(s) | 136 |
| HpyCH4V | TGCA | 2 cut(s) | 111, 140 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 65 |
| Hsp92II | CATG | 1 cut(s) | 82 |
| LpnPI | CCDG | 2 cut(s) | 75, 121 |
| Lsp1109I | GCAGC | 2 cut(s) | 25, 43 |
| MlyI | GAGTC | 2 cut(s) | 102, 220 |
| MnlI | CCTC | 2 cut(s) | 115, 158 |
| MseI | TTAA | 1 cut(s) | 63 |
| MspCI | CTTAAG | 1 cut(s) | 62 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 65 |
| NlaIII | CATG | 1 cut(s) | 82 |
| PceI | AGGCCT | 1 cut(s) | 68 |
| PkrI | GCNGC | 2 cut(s) | 40, 58 |
| PleI | GAGTC | 2 cut(s) | 101, 220 |
| PpsI | GAGTC | 2 cut(s) | 101, 220 |
| RsaI | GTAC | 1 cut(s) | 182 |
| RsaNI | GTAC | 1 cut(s) | 181 |
| SaqAI | TTAA | 1 cut(s) | 63 |
| SatI | GCNGC | 2 cut(s) | 39, 57 |
| ScaI | AGTACT | 1 cut(s) | 182 |
| SchI | GAGTC | 2 cut(s) | 102, 220 |
| SetI | ASST | 4 cut(s) | 116, 128, 136, 150 |
| SmlI | CTYRAG | 1 cut(s) | 62 |
| SmoI | CTYRAG | 1 cut(s) | 62 |
| SseBI | AGGCCT | 1 cut(s) | 68 |
| SsiI | CCGC | 1 cut(s) | 102 |
| StuI | AGGCCT | 1 cut(s) | 68 |
| StyI | CCWWGG | 1 cut(s) | 51 |
| TaqI | TCGA | 1 cut(s) | 229 |
| TatI | WGTACW | 1 cut(s) | 180 |
| Tru1I | TTAA | 1 cut(s) | 63 |
| Tru9I | TTAA | 1 cut(s) | 63 |
| TscAI | CASTG | 1 cut(s) | 94 |
| TseI | GCWGC | 2 cut(s) | 38, 56 |
| TspRI | CASTG | 1 cut(s) | 94 |
| Vha464I | CTTAAG | 1 cut(s) | 62 |
| XmiI | GTMKAC | 1 cut(s) | 9 |
| ZrmI | AGTACT | 1 cut(s) | 182 |