Golgi vesicle prefusion complex stabilization
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr0c11g0499521 RchiOBHm_Chr7g0236001 |
| rosa_laevigata | RLG00000001107 RLG00000001113 RLG00000001931 RLG00000030010 |
| rosa_multiflora | Rmu_sc0000755.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00225450 |
| rosa_samantha | Rh7DG437900 Rh7DG438300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 15, 54 |
| AfaI | GTAC | 1 cut(s) | 108 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 253 |
| AgsI | TTSAA | 1 cut(s) | 179 |
| AoxI | GGCC | 1 cut(s) | 264 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 170 |
| AsuHPI | GGTGA | 1 cut(s) | 73 |
| BmsI | GCATC | 1 cut(s) | 31 |
| BpmI | CTGGAG | 1 cut(s) | 100 |
| BpuEI | CTTGAG | 1 cut(s) | 32 |
| BsaJI | CCNNGG | 2 cut(s) | 36, 267 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 253 |
| Bse118I | RCCGGY | 1 cut(s) | 253 |
| Bse1I | ACTGG | 1 cut(s) | 79 |
| Bse3DI | GCAATG | 1 cut(s) | 237 |
| BseDI | CCNNGG | 2 cut(s) | 36, 267 |
| BseGI | GGATG | 2 cut(s) | 46, 201 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 253 |
| BseMI | GCAATG | 1 cut(s) | 237 |
| BseNI | ACTGG | 1 cut(s) | 79 |
| BseRI | GAGGAG | 1 cut(s) | 275 |
| BshFI | GGCC | 1 cut(s) | 266 |
| BsiSI | CCGG | 1 cut(s) | 254 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 253 |
| BsmI | GAATGC | 1 cut(s) | 238 |
| BsnI | GGCC | 1 cut(s) | 266 |
| Bsp19I | CCATGG | 1 cut(s) | 36 |
| BspANI | GGCC | 1 cut(s) | 266 |
| BsrDI | GCAATG | 1 cut(s) | 237 |
| BsrFI | RCCGGY | 1 cut(s) | 253 |
| BsrI | ACTGG | 1 cut(s) | 79 |
| BssAI | RCCGGY | 1 cut(s) | 253 |
| BssECI | CCNNGG | 2 cut(s) | 36, 267 |
| BssT1I | CCWWGG | 2 cut(s) | 36, 267 |
| Bst4CI | ACNGT | 1 cut(s) | 106 |
| BstC8I | GCNNGC | 1 cut(s) | 28 |
| BstDSI | CCRYGG | 1 cut(s) | 36 |
| BstF5I | GGATG | 2 cut(s) | 46, 201 |
| BsuRI | GGCC | 1 cut(s) | 266 |
| BtgI | CCRYGG | 1 cut(s) | 36 |
| BtsCI | GGATG | 2 cut(s) | 46, 201 |
| BtsIMutI | CAGTG | 1 cut(s) | 72 |
| Cac8I | GCNNGC | 1 cut(s) | 28 |
| Cfr10I | RCCGGY | 1 cut(s) | 253 |
| Csp6I | GTAC | 1 cut(s) | 107 |
| CviAII | CATG | 2 cut(s) | 37, 64 |
| CviJI | RGCY | 4 cut(s) | 71, 202, 253, 266 |
| CviKI_1 | RGCY | 4 cut(s) | 71, 202, 253, 266 |
| CviQI | GTAC | 1 cut(s) | 107 |
| Eco130I | CCWWGG | 2 cut(s) | 36, 267 |
| EcoT14I | CCWWGG | 2 cut(s) | 36, 267 |
| ErhI | CCWWGG | 2 cut(s) | 36, 267 |
| FaeI | CATG | 2 cut(s) | 40, 67 |
| FaiI | YATR | 4 cut(s) | 38, 65, 159, 230 |
| FatI | CATG | 2 cut(s) | 36, 63 |
| FblI | GTMKAC | 2 cut(s) | 15, 54 |
| FokI | GGATG | 2 cut(s) | 53, 208 |
| GsuI | CTGGAG | 1 cut(s) | 100 |
| HaeIII | GGCC | 1 cut(s) | 266 |
| HapII | CCGG | 1 cut(s) | 254 |
| Hin1II | CATG | 2 cut(s) | 40, 67 |
| HpaII | CCGG | 1 cut(s) | 254 |
| HphI | GGTGA | 1 cut(s) | 73 |
| Hpy166II | GTNNAC | 2 cut(s) | 16, 55 |
| Hpy188III | TCNNGA | 1 cut(s) | 117 |
| Hpy8I | GTNNAC | 2 cut(s) | 16, 55 |
| HpyCH4III | ACNGT | 1 cut(s) | 106 |
| HpyCH4V | TGCA | 1 cut(s) | 125 |
| Hsp92II | CATG | 2 cut(s) | 40, 67 |
| LpnPI | CCDG | 7 cut(s) | 12, 34, 60, 71, 99, 130, 267 |
| LweI | GCATC | 1 cut(s) | 31 |
| MaeIII | GTNAC | 1 cut(s) | 79 |
| MboII | GAAGA | 1 cut(s) | 175 |
| MluCI | AATT | 1 cut(s) | 139 |
| MmeI | TCCRAC | 1 cut(s) | 165 |
| MnlI | CCTC | 3 cut(s) | 100, 253, 256 |
| MroXI | GAANNNNTTC | 1 cut(s) | 170 |
| MspI | CCGG | 1 cut(s) | 254 |
| Mva1269I | GAATGC | 1 cut(s) | 238 |
| NcoI | CCATGG | 1 cut(s) | 36 |
| NlaIII | CATG | 2 cut(s) | 40, 67 |
| NmuCI | GTSAC | 1 cut(s) | 79 |
| PctI | GAATGC | 1 cut(s) | 238 |
| PdmI | GAANNNNTTC | 1 cut(s) | 170 |
| RsaI | GTAC | 1 cut(s) | 108 |
| RsaNI | GTAC | 1 cut(s) | 107 |
| SetI | ASST | 1 cut(s) | 54 |
| SfaNI | GCATC | 1 cut(s) | 31 |
| SmlI | CTYRAG | 1 cut(s) | 47 |
| SmoI | CTYRAG | 1 cut(s) | 47 |
| Sse9I | AATT | 1 cut(s) | 139 |
| StyI | CCWWGG | 2 cut(s) | 36, 267 |
| TaaI | ACNGT | 1 cut(s) | 106 |
| TasI | AATT | 1 cut(s) | 139 |
| TscAI | CASTG | 1 cut(s) | 79 |
| TseFI | GTSAC | 1 cut(s) | 79 |
| Tsp45I | GTSAC | 1 cut(s) | 79 |
| TspDTI | ATGAA | 2 cut(s) | 212, 245 |
| TspRI | CASTG | 1 cut(s) | 79 |
| XmiI | GTMKAC | 2 cut(s) | 15, 54 |
| XmnI | GAANNNNTTC | 1 cut(s) | 170 |