Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0018209

Physical Location & Seq

Genomic Coordinates Reverse (-)

33828189 .. 33834176

Gene Structure 5988 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002422

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1539 bp

ATGGGGGACTTGGCGTTGAAGAGTTTGGGGTCTGACTTGGAAGAAAACACGACCTCGTTTAAGAGTTTGGGGCTATGCGATAAACTGGTGAAGGCTGTTGGTGAACTGCAATGGAAAGCCCCTACCCCTATTCAAGCGGAGACGATACCTCACGCCCTCGCAGGCAGACACTTGATCGCACTTGCCCAAACGGGTTCGGGTAAAACCGGAGCCTTTGCTCTTCCGATACTGCAAGCTCTAATGGATTCTCCTCAAAAAGCCTTTTTTGCTTTGGTTCTCTCCCCAACAAGGGAGCTTGCTGTTCAGATCAGAGACCAGTTTGAAGCCCTCGGCGTCTCGATTGGTGCCAAGTCTGCTGTGGTGAGTATACTCCAGCTTTGCTACCAGTACCAGACATGCATTAAACTATTAACTAGCAATCTTCTATCTAGGTTATGGCCCATTAGTTTATTTCAAATTGAAAACTTTATTTATTTTAGTAGCTTGAGATACTGTTGTTTAGTTGAGGGCTCAACCAATTCGCTTTCTTTATTGGTTCAGCTTATTGGAGGACTGAACATGGTGGAAGAATCTAAGGTTCTTGCAAGGCGGCCACACATCATTGTTGCGACACCCGGACGCCTCCTTCATCATCTGCGTGACACAAAGGGATTTTCTCTTCGCACAGTGAAATATCTGGTTTTAGACGAGGCAGACAGGCTGCTTGGTGATGAATTTCAAAAATCGACAGACGAAATTCTGAAATCCCTCCCTCGTGGTGGTGAACGGATCACATATTTATTTTCTGCTACGATGACCAAAAAGGTCAAGAAGGTTGAAAGAGCTTGTCTAAGGAACCCTGTGAAGATTGAAGTAGCATCCAAGTACTCTACGGTTGACACACTAAAGCAGCATGTATTGATGGCGCCATTCAAGCACAAGGATTGCTATCTCGTATATATTCTTACTAAGAAGTGTCAGTGCACAACAATGGTTTTTACTGAACAATGCGCCACAGCACCCTTTTTGGCTTATACACTTCGAAATCTTGGAATTAGGGCCATCCCTCTTCATGGTGATATGAGCCAGCAAAAAAGACTTGGAGCCTTAAACATGTTCAAATCAGGACAGTGTAATGTACTTGTCTGCACTGATGTGGCAAGTAGAGGATTGGATATTCCATCGGTGGATATGGTTATTAATTATGATATTCCCAAGAACACTAAGAATTACATCCATCGAGTAGGAAGAACTGCTCGTGCTGGGCGATCCGGGGTTGCAATCACTTTCGTGGGCAGTATTCTTGACTTACCAGGGTATTCCCAGATAGAATCGCTTATTGGCAATAAGTTACCGCTATTTCCTGCTCCATCTGAAGAAGCCTTACAATTTCTAGAAAGTGTCAGAGAGGCTAGAAGATTGGCCACTTCGAAAATGAAAGAAAGTGGAGGCAAGAAGAGAAAGTGGGGAGGAAACGATGATGAGGAGGATATTGTAAAGTATTTAAGTAACCAGGCTGGAACGTCCAAGAAGATGTTCAACAAAAGGTTCAAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010467 GO:0010501 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022613 GO:0031974 GO:0031981 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0071840 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

513

Amino Acids

56.79

Weight (kDa)

9.49

Isoelectric Point (pI)

40.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	42 - 119	6.1e-20	DEAD/DEAH box helicase
DEAD	PF00270	180 - 272	1.4e-18	DEAD/DEAH box helicase
Helicase_C	PF00271	310 - 415	1.7e-30	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0018209)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr7g0218021
rosa_laevigata	RLG00000002422
rosa_multiflora	Rmu_sc0000870.1_g000002 Rmu_sc0008242.1_g000003
rosa_roxburghii	Rroxscaffold_3G00241500
rosa_rugosa	Rorug07G0173000
rosa_samantha	Rh7AG315300 Rh7CG332700 Rh7DG313700
rosa_wichuraiana	Rw7G026640 Rw7G026720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	344, 904
AccI	GTMKAC	1 cut(s)	367
AciI	CCGC	3 cut(s)	137, 589, 1334
AclWI	GGATC	2 cut(s)	776, 1242
AcoI	YGGCCR	2 cut(s)	590, 1401
AcsI	RAATTY	2 cut(s)	713, 735
AcuI	CTGAAG	1 cut(s)	1374
AcyI	GRCGYC	3 cut(s)	333, 619, 905
AfaI	GTAC	3 cut(s)	389, 866, 1119
AfiI	CCNNNNNNNGG	4 cut(s)	288, 289, 758, 1052
AflIII	ACRYGT	1 cut(s)	1092
AjnI	CCWGG	2 cut(s)	1291, 1491
AjuI	GAANNNNNNNTTGG	4 cut(s)	1302, 1334, 1499, 1531
AleI	CACNNNNGTG	2 cut(s)	1133, 1268
AluBI	AGCT	6 cut(s)	236, 295, 376, 483, 541, 824
AluI	AGCT	6 cut(s)	236, 295, 376, 483, 541, 824
Alw21I	GWGCWC	1 cut(s)	965
Alw26I	GTCTC	3 cut(s)	134, 306, 340
Alw44I	GTGCAC	1 cut(s)	961
AlwI	GGATC	2 cut(s)	776, 1242
AoxI	GGCC	4 cut(s)	437, 590, 1038, 1401
ApaLI	GTGCAC	1 cut(s)	961
ApeKI	GCWGC	2 cut(s)	700, 889
ApoI	RAATTY	2 cut(s)	713, 735
AseI	ATTAAT	1 cut(s)	1179
Asp700I	GAANNNNTTC	1 cut(s)	1514
AspLEI	GCGC	2 cut(s)	907, 992
AspS9I	GGNCC	2 cut(s)	438, 1038
AsuC2I	CCSGG	2 cut(s)	615, 1252
AsuHPI	GGTGA	6 cut(s)	100, 113, 373, 719, 773, 1067
AsuII	TTCGAA	2 cut(s)	1021, 1409
BaeGI	GKGCMC	1 cut(s)	965
BaeI	ACNNNNGTAYC	2 cut(s)	481, 514
BalI	TGGCCA	1 cut(s)	1403
BanI	GGYRCC	2 cut(s)	344, 904
BanII	GRGCYC	1 cut(s)	512
BarI	GAAGNNNNNNTAC	2 cut(s)	1347, 1379
BauI	CACGAG	2 cut(s)	753, 1236
Bbv12I	GWGCWC	1 cut(s)	965
BbvI	GCAGC	2 cut(s)	687, 901
BccI	CCATC	5 cut(s)	895, 1049, 1168, 1224, 1357
BciT130I	CCWGG	2 cut(s)	1293, 1493
BcnI	CCSGG	2 cut(s)	615, 1252
BcoDI	GTCTC	3 cut(s)	134, 306, 340
BfaI	CTAG	4 cut(s)	414, 429, 1373, 1392
BfoI	RGCGCY	1 cut(s)	908
BisI	GCNGC	3 cut(s)	590, 701, 890
BlsI	GCNGC	3 cut(s)	591, 702, 891
BmcAI	AGTACT	1 cut(s)	866
Bme1390I	CCNGG	4 cut(s)	615, 1252, 1293, 1493
BmgT120I	GGNCC	2 cut(s)	438, 1038
BmiI	GGNNCC	5 cut(s)	211, 346, 836, 906, 1084
BmrFI	CCNGG	4 cut(s)	615, 1252, 1293, 1493
BmsI	GCATC	1 cut(s)	866
BpmI	CTGGAG	1 cut(s)	356
Bpu14I	TTCGAA	2 cut(s)	1021, 1409
BpuEI	CTTGAG	1 cut(s)	505
BpuMI	CCSGG	2 cut(s)	615, 1252
BsaBI	GATNNNNATC	1 cut(s)	927
BsaHI	GRCGYC	3 cut(s)	333, 619, 905
BsaI	GGTCTC	1 cut(s)	306
BsaJI	CCNNGG	3 cut(s)	328, 1251, 1292
BsaWI	WCCGGW	1 cut(s)	206
Bsc4I	CCNNNNNNNGG	4 cut(s)	288, 289, 758, 1052
Bse1I	ACTGG	3 cut(s)	90, 316, 385
Bse3DI	GCAATG	1 cut(s)	116
Bse8I	GATNNNNATC	1 cut(s)	927
BseBI	CCWGG	2 cut(s)	1293, 1493
BseDI	CCNNGG	3 cut(s)	328, 1251, 1292
BseGI	GGATG	3 cut(s)	857, 1041, 1212
BseJI	GATNNNNATC	1 cut(s)	927
BseLI	CCNNNNNNNGG	4 cut(s)	288, 289, 758, 1052
BseMI	GCAATG	1 cut(s)	116
BseNI	ACTGG	3 cut(s)	90, 316, 385
BseRI	GAGGAG	2 cut(s)	240, 1478
BseSI	GKGCMC	1 cut(s)	965
BseXI	GCAGC	2 cut(s)	687, 901
BseYI	CCCAGC	1 cut(s)	1241
BsgI	GTGCAG	1 cut(s)	1111
BshFI	GGCC	4 cut(s)	439, 592, 1040, 1403
BshNI	GGYRCC	2 cut(s)	344, 904
BsiHKAI	GWGCWC	1 cut(s)	965
BsiSI	CCGG	3 cut(s)	207, 615, 1251
BslFI	GGGAC	1 cut(s)	20
BslI	CCNNNNNNNGG	4 cut(s)	288, 289, 758, 1052
BsmAI	GTCTC	3 cut(s)	134, 306, 340
BsmBI	CGTCTC	2 cut(s)	134, 340
BsmFI	GGGAC	1 cut(s)	20
BsnI	GGCC	4 cut(s)	439, 592, 1040, 1403
Bso31I	GGTCTC	1 cut(s)	306
Bsp119I	TTCGAA	2 cut(s)	1021, 1409
Bsp1286I	GDGCHC	2 cut(s)	512, 965
Bsp143I	GATC	4 cut(s)	174, 306, 768, 1247
BspACI	CCGC	3 cut(s)	137, 589, 1334
BspANI	GGCC	4 cut(s)	439, 592, 1040, 1403
BspLI	GGNNCC	5 cut(s)	211, 346, 836, 906, 1084
BspPI	GGATC	2 cut(s)	776, 1242
BspQI	GCTCTTC	1 cut(s)	225
BspT104I	TTCGAA	2 cut(s)	1021, 1409
BspT107I	GGYRCC	2 cut(s)	344, 904
BspTNI	GGTCTC	1 cut(s)	306
BsrDI	GCAATG	1 cut(s)	116
BsrI	ACTGG	3 cut(s)	90, 316, 385
BssECI	CCNNGG	3 cut(s)	328, 1251, 1292
BssMI	GATC	4 cut(s)	174, 306, 768, 1247
BssNAI	GTATAC	1 cut(s)	368
BssNI	GRCGYC	3 cut(s)	333, 619, 905
BssSI	CACGAG	2 cut(s)	753, 1236
Bst1107I	GTATAC	1 cut(s)	368
Bst2BI	CACGAG	2 cut(s)	753, 1236
Bst2UI	CCWGG	2 cut(s)	1293, 1493
Bst4CI	ACNGT	4 cut(s)	494, 667, 874, 1110
Bst6I	CTCTTC	5 cut(s)	14, 225, 663, 1053, 1430
BstACI	GRCGYC	3 cut(s)	333, 619, 905
BstBI	TTCGAA	2 cut(s)	1021, 1409
BstC8I	GCNNGC	4 cut(s)	163, 234, 297, 1067
BstDEI	CTNAG	4 cut(s)	573, 830, 948, 1203
BstF5I	GGATG	3 cut(s)	857, 1041, 1212
BstH2I	RGCGCY	1 cut(s)	908
BstHHI	GCGC	2 cut(s)	907, 992
BstKTI	GATC	4 cut(s)	177, 309, 771, 1250
BstMAI	GTCTC	3 cut(s)	134, 306, 340
BstMBI	GATC	4 cut(s)	174, 306, 768, 1247
BstMWI	GCNNNNNNNGC	3 cut(s)	266, 353, 913
BstNI	CCWGG	2 cut(s)	1293, 1493
BstNSI	RCATGY	3 cut(s)	399, 896, 1096
BstSCI	CCNGG	4 cut(s)	613, 1250, 1291, 1491
BstSLI	GKGCMC	1 cut(s)	965
BstV1I	GCAGC	2 cut(s)	687, 901
BstZ17I	GTATAC	1 cut(s)	368
BsuRI	GGCC	4 cut(s)	439, 592, 1040, 1403
BtsCI	GGATG	3 cut(s)	857, 1041, 1212
BtsIMutI	CAGTG	4 cut(s)	672, 965, 1115, 1128
Cac8I	GCNNGC	4 cut(s)	163, 234, 297, 1067
CfoI	GCGC	2 cut(s)	907, 992
Cfr13I	GGNCC	2 cut(s)	438, 1038
CseI	GACGC	2 cut(s)	322, 627
Csp6I	GTAC	3 cut(s)	388, 865, 1118
CviAII	CATG	5 cut(s)	396, 559, 893, 1052, 1093
CviQI	GTAC	3 cut(s)	388, 865, 1118
DdeI	CTNAG	4 cut(s)	573, 830, 948, 1203
DinI	GGCGCC	1 cut(s)	906
DpnI	GATC	4 cut(s)	176, 308, 770, 1249
DpnII	GATC	4 cut(s)	174, 306, 768, 1247
EaeI	YGGCCR	2 cut(s)	590, 1401
Eam1104I	CTCTTC	5 cut(s)	14, 225, 663, 1053, 1430
EarI	CTCTTC	5 cut(s)	14, 225, 663, 1053, 1430
Eco24I	GRGCYC	1 cut(s)	512
Eco31I	GGTCTC	1 cut(s)	306
Eco57I	CTGAAG	1 cut(s)	1374
EcoRII	CCWGG	2 cut(s)	1291, 1491
EcoT22I	ATGCAT	1 cut(s)	401
EcoT38I	GRGCYC	1 cut(s)	512
EgeI	GGCGCC	1 cut(s)	906
EheI	GGCGCC	1 cut(s)	906
Esp3I	CGTCTC	2 cut(s)	134, 340
FaeI	CATG	5 cut(s)	399, 562, 896, 1055, 1096
FaqI	GGGAC	1 cut(s)	20
FatI	CATG	5 cut(s)	395, 558, 892, 1051, 1092
FblI	GTMKAC	1 cut(s)	367
Fnu4HI	GCNGC	3 cut(s)	590, 701, 890
FokI	GGATG	3 cut(s)	844, 1028, 1199
FriOI	GRGCYC	1 cut(s)	512
Fsp4HI	GCNGC	3 cut(s)	590, 701, 890
FspBI	CTAG	4 cut(s)	414, 429, 1373, 1392
GlaI	GCGC	2 cut(s)	906, 991
GluI	GCNGC	3 cut(s)	590, 701, 890
GsaI	CCCAGC	1 cut(s)	1245
GsuI	CTGGAG	1 cut(s)	356
HaeII	RGCGCY	1 cut(s)	908
HaeIII	GGCC	4 cut(s)	439, 592, 1040, 1403
HapII	CCGG	3 cut(s)	207, 615, 1251
HgaI	GACGC	2 cut(s)	322, 627
HhaI	GCGC	2 cut(s)	907, 992
Hin1I	GRCGYC	3 cut(s)	333, 619, 905
Hin1II	CATG	5 cut(s)	399, 562, 896, 1055, 1096
Hin6I	GCGC	2 cut(s)	905, 990
HinP1I	GCGC	2 cut(s)	905, 990
HincII	GTYRAC	1 cut(s)	877
HindII	GTYRAC	1 cut(s)	877
HinfI	GANTC	3 cut(s)	245, 569, 1310
HpaII	CCGG	3 cut(s)	207, 615, 1251
HphI	GGTGA	6 cut(s)	100, 113, 373, 719, 773, 1067
Hpy166II	GTNNAC	5 cut(s)	104, 368, 764, 877, 963
Hpy188I	TCNGA	7 cut(s)	34, 225, 306, 311, 741, 1354, 1385
Hpy188III	TCNNGA	6 cut(s)	337, 808, 1104, 1283, 1373, 1531
Hpy8I	GTNNAC	5 cut(s)	104, 368, 764, 877, 963
HpyAV	CCTTC	3 cut(s)	85, 635, 805
HpyCH4III	ACNGT	4 cut(s)	494, 667, 874, 1110
HpyCH4IV	ACGT	1 cut(s)	1502
HpyCH4V	TGCA	7 cut(s)	109, 232, 399, 584, 963, 1128, 1259
HpyF10VI	GCNNNNNNNGC	3 cut(s)	266, 353, 913
HpyF3I	CTNAG	4 cut(s)	573, 830, 948, 1203
HpySE526I	ACGT	1 cut(s)	1502
Hsp92I	GRCGYC	3 cut(s)	333, 619, 905
Hsp92II	CATG	5 cut(s)	399, 562, 896, 1055, 1096
HspAI	GCGC	2 cut(s)	905, 990
KasI	GGCGCC	1 cut(s)	904
Kzo9I	GATC	4 cut(s)	174, 306, 768, 1247
LguI	GCTCTTC	1 cut(s)	225
LmnI	GCTCC	4 cut(s)	209, 292, 1082, 1351
Lsp1109I	GCAGC	2 cut(s)	687, 901
LweI	GCATC	1 cut(s)	866
MaeI	CTAG	4 cut(s)	414, 429, 1373, 1392
MaeII	ACGT	1 cut(s)	1502
MaeIII	GTNAC	3 cut(s)	638, 1329, 1487
MalI	GATC	4 cut(s)	176, 308, 770, 1249
MboI	GATC	4 cut(s)	174, 306, 768, 1247
MhlI	GDGCHC	2 cut(s)	512, 965
MlsI	TGGCCA	1 cut(s)	1403
MluCI	AATT	8 cut(s)	456, 517, 713, 735, 1032, 1180, 1207, 1367
MluNI	TGGCCA	1 cut(s)	1403
Mly113I	GGCGCC	1 cut(s)	905
Mox20I	TGGCCA	1 cut(s)	1403
Mph1103I	ATGCAT	1 cut(s)	401
MroXI	GAANNNNTTC	1 cut(s)	1514
MscI	TGGCCA	1 cut(s)	1403
MseI	TTAA	6 cut(s)	60, 402, 410, 1088, 1179, 1484
MslI	CAYNNNNRTG	4 cut(s)	636, 968, 1133, 1268
Msp20I	TGGCCA	1 cut(s)	1403
MspI	CCGG	3 cut(s)	207, 615, 1251
MspR9I	CCNGG	4 cut(s)	615, 1252, 1293, 1493
MvaI	CCWGG	2 cut(s)	1293, 1493
MwoI	GCNNNNNNNGC	3 cut(s)	266, 353, 913
NarI	GGCGCC	1 cut(s)	905
NciI	CCSGG	2 cut(s)	615, 1252
NdeII	GATC	4 cut(s)	174, 306, 768, 1247
NlaIII	CATG	5 cut(s)	399, 562, 896, 1055, 1096
NlaIV	GGNNCC	5 cut(s)	211, 346, 836, 906, 1084
NmeAIII	GCCGAG	1 cut(s)	309
NmuCI	GTSAC	1 cut(s)	638
NsiI	ATGCAT	1 cut(s)	401
NspI	RCATGY	3 cut(s)	399, 896, 1096
NspV	TTCGAA	2 cut(s)	1021, 1409
OliI	CACNNNNGTG	2 cut(s)	1133, 1268
PciI	ACATGT	1 cut(s)	1092
PciSI	GCTCTTC	1 cut(s)	225
PcsI	WCGNNNNNNNCGW	1 cut(s)	1243
PdmI	GAANNNNTTC	1 cut(s)	1514
PfeI	GAWTC	3 cut(s)	245, 569, 1310
PkrI	GCNGC	3 cut(s)	591, 702, 891
PluTI	GGCGCC	1 cut(s)	908
PscI	ACATGT	1 cut(s)	1092
PshBI	ATTAAT	1 cut(s)	1179
Psp6I	CCWGG	2 cut(s)	1291, 1491
PspFI	CCCAGC	1 cut(s)	1241
PspGI	CCWGG	2 cut(s)	1291, 1491
PspN4I	GGNNCC	5 cut(s)	211, 346, 836, 906, 1084
PspPI	GGNCC	2 cut(s)	438, 1038
RsaI	GTAC	3 cut(s)	389, 866, 1119
RsaNI	GTAC	3 cut(s)	388, 865, 1118
RseI	CAYNNNNRTG	4 cut(s)	636, 968, 1133, 1268
SapI	GCTCTTC	1 cut(s)	225
SaqAI	TTAA	6 cut(s)	60, 402, 410, 1088, 1179, 1484
SatI	GCNGC	3 cut(s)	590, 701, 890
Sau3AI	GATC	4 cut(s)	174, 306, 768, 1247
Sau96I	GGNCC	2 cut(s)	438, 1038
ScaI	AGTACT	1 cut(s)	866
ScrFI	CCNGG	4 cut(s)	615, 1252, 1293, 1493
SduI	GDGCHC	2 cut(s)	512, 965
SfaNI	GCATC	1 cut(s)	866
SfoI	GGCGCC	1 cut(s)	906
SfuI	TTCGAA	2 cut(s)	1021, 1409
SmiMI	CAYNNNNRTG	4 cut(s)	636, 968, 1133, 1268
SmlI	CTYRAG	1 cut(s)	484
SmoI	CTYRAG	1 cut(s)	484
Sse9I	AATT	8 cut(s)	456, 517, 713, 735, 1032, 1180, 1207, 1367
SsiI	CCGC	3 cut(s)	137, 589, 1334
SspDI	GGCGCC	1 cut(s)	904
SspMI	CTAG	4 cut(s)	414, 429, 1373, 1392
StyD4I	CCNGG	4 cut(s)	613, 1250, 1291, 1491
TaaI	ACNGT	4 cut(s)	494, 667, 874, 1110
TaiI	ACGT	1 cut(s)	1505
TaqI	TCGA	5 cut(s)	338, 725, 1021, 1219, 1409
TasI	AATT	8 cut(s)	456, 517, 713, 735, 1032, 1180, 1207, 1367
TatI	WGTACW	2 cut(s)	864, 1117
TauI	GCSGC	1 cut(s)	592
TfiI	GAWTC	3 cut(s)	245, 569, 1310
Tru1I	TTAA	6 cut(s)	60, 402, 410, 1088, 1179, 1484
Tru9I	TTAA	6 cut(s)	60, 402, 410, 1088, 1179, 1484
TscAI	CASTG	4 cut(s)	672, 965, 1115, 1135
TseFI	GTSAC	1 cut(s)	638
TseI	GCWGC	2 cut(s)	700, 889
Tsp45I	GTSAC	1 cut(s)	638
TspDTI	ATGAA	4 cut(s)	617, 726, 1040, 1430
TspGWI	ACGGA	1 cut(s)	781
TspRI	CASTG	4 cut(s)	672, 965, 1115, 1135
VneI	GTGCAC	1 cut(s)	961
VspI	ATTAAT	1 cut(s)	1179
XapI	RAATTY	2 cut(s)	713, 735
XbaI	TCTAGA	1 cut(s)	1372
XceI	RCATGY	3 cut(s)	399, 896, 1096
XcmI	CCANNNNNNNNNTGG	1 cut(s)	355
XmiI	GTMKAC	1 cut(s)	367
XmnI	GAANNNNTTC	1 cut(s)	1514
XspI	CTAG	4 cut(s)	414, 429, 1373, 1392
ZrmI	AGTACT	1 cut(s)	866
Zsp2I	ATGCAT	1 cut(s)	401

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.