Belongs to the DEAD box helicase family
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0218021 |
| rosa_laevigata | RLG00000002422 |
| rosa_multiflora | Rmu_sc0000870.1_g000002 Rmu_sc0008242.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00241500 |
| rosa_rugosa | Rorug07G0173000 |
| rosa_samantha | Rh7AG315300 Rh7CG332700 Rh7DG313700 |
| rosa_wichuraiana | Rw7G026640 Rw7G026720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 35 |
| AccB1I | GGYRCC | 2 cut(s) | 323, 703 |
| AciI | CCGC | 2 cut(s) | 116, 388 |
| AclWI | GGATC | 2 cut(s) | 575, 1041 |
| AcoI | YGGCCR | 3 cut(s) | 389, 1120, 1200 |
| AcsI | RAATTY | 2 cut(s) | 512, 534 |
| AcuI | CTGAAG | 1 cut(s) | 1173 |
| AcyI | GRCGYC | 4 cut(s) | 32, 312, 418, 704 |
| AfaI | GTAC | 2 cut(s) | 665, 918 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 267, 268, 557, 851 |
| AflIII | ACRYGT | 1 cut(s) | 891 |
| AgsI | TTSAA | 8 cut(s) | 113, 302, 518, 617, 650, 712, 898, 1318 |
| AjnI | CCWGG | 2 cut(s) | 1090, 1290 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1101, 1133, 1298, 1330 |
| AleI | CACNNNNGTG | 2 cut(s) | 932, 1067 |
| AluBI | AGCT | 3 cut(s) | 215, 274, 623 |
| AluI | AGCT | 3 cut(s) | 215, 274, 623 |
| Alw21I | GWGCWC | 1 cut(s) | 764 |
| Alw26I | GTCTC | 3 cut(s) | 113, 285, 319 |
| Alw44I | GTGCAC | 1 cut(s) | 760 |
| AlwI | GGATC | 2 cut(s) | 575, 1041 |
| AoxI | GGCC | 5 cut(s) | 72, 389, 837, 1120, 1200 |
| ApaLI | GTGCAC | 1 cut(s) | 760 |
| ApeKI | GCWGC | 2 cut(s) | 499, 688 |
| ApoI | RAATTY | 2 cut(s) | 512, 534 |
| AseI | ATTAAT | 1 cut(s) | 978 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1313 |
| AspLEI | GCGC | 2 cut(s) | 706, 791 |
| AspS9I | GGNCC | 1 cut(s) | 837 |
| AsuC2I | CCSGG | 2 cut(s) | 414, 1051 |
| AsuHPI | GGTGA | 5 cut(s) | 79, 92, 518, 572, 866 |
| AsuII | TTCGAA | 1 cut(s) | 820 |
| BaeGI | GKGCMC | 1 cut(s) | 764 |
| BalI | TGGCCA | 2 cut(s) | 1122, 1202 |
| BanI | GGYRCC | 2 cut(s) | 323, 703 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1146, 1178 |
| BauI | CACGAG | 2 cut(s) | 552, 1035 |
| Bbv12I | GWGCWC | 1 cut(s) | 764 |
| BbvI | GCAGC | 2 cut(s) | 486, 700 |
| BccI | CCATC | 5 cut(s) | 694, 848, 967, 1023, 1156 |
| BceAI | ACGGC | 2 cut(s) | 59, 691 |
| BciT130I | CCWGG | 2 cut(s) | 1092, 1292 |
| BcnI | CCSGG | 2 cut(s) | 414, 1051 |
| BcoDI | GTCTC | 3 cut(s) | 113, 285, 319 |
| BfaI | CTAG | 2 cut(s) | 1172, 1191 |
| BfoI | RGCGCY | 1 cut(s) | 707 |
| BisI | GCNGC | 3 cut(s) | 389, 500, 689 |
| BlsI | GCNGC | 3 cut(s) | 390, 501, 690 |
| BmcAI | AGTACT | 1 cut(s) | 665 |
| Bme1390I | CCNGG | 4 cut(s) | 414, 1051, 1092, 1292 |
| BmgT120I | GGNCC | 1 cut(s) | 837 |
| BmiI | GGNNCC | 5 cut(s) | 190, 325, 635, 705, 883 |
| BmrFI | CCNGG | 4 cut(s) | 414, 1051, 1092, 1292 |
| BmsI | GCATC | 1 cut(s) | 665 |
| Bpu14I | TTCGAA | 1 cut(s) | 820 |
| BpuMI | CCSGG | 2 cut(s) | 414, 1051 |
| BsaBI | GATNNNNATC | 1 cut(s) | 726 |
| BsaHI | GRCGYC | 4 cut(s) | 32, 312, 418, 704 |
| BsaI | GGTCTC | 1 cut(s) | 285 |
| BsaJI | CCNNGG | 4 cut(s) | 307, 372, 1050, 1091 |
| BsaWI | WCCGGW | 1 cut(s) | 185 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 267, 268, 557, 851 |
| Bse1I | ACTGG | 2 cut(s) | 69, 295 |
| Bse3DI | GCAATG | 1 cut(s) | 95 |
| Bse8I | GATNNNNATC | 1 cut(s) | 726 |
| BseBI | CCWGG | 2 cut(s) | 1092, 1292 |
| BseDI | CCNNGG | 4 cut(s) | 307, 372, 1050, 1091 |
| BseGI | GGATG | 3 cut(s) | 656, 840, 1011 |
| BseJI | GATNNNNATC | 1 cut(s) | 726 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 267, 268, 557, 851 |
| BseMI | GCAATG | 1 cut(s) | 95 |
| BseNI | ACTGG | 2 cut(s) | 69, 295 |
| BseRI | GAGGAG | 2 cut(s) | 219, 1277 |
| BseSI | GKGCMC | 1 cut(s) | 764 |
| BseXI | GCAGC | 2 cut(s) | 486, 700 |
| BseYI | CCCAGC | 1 cut(s) | 1040 |
| BsgI | GTGCAG | 1 cut(s) | 910 |
| BshFI | GGCC | 5 cut(s) | 74, 391, 839, 1122, 1202 |
| BshNI | GGYRCC | 2 cut(s) | 323, 703 |
| BsiHKAI | GWGCWC | 1 cut(s) | 764 |
| BsiSI | CCGG | 3 cut(s) | 186, 414, 1050 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 267, 268, 557, 851 |
| BsmAI | GTCTC | 3 cut(s) | 113, 285, 319 |
| BsmBI | CGTCTC | 2 cut(s) | 113, 319 |
| BsnI | GGCC | 5 cut(s) | 74, 391, 839, 1122, 1202 |
| Bso31I | GGTCTC | 1 cut(s) | 285 |
| Bsp119I | TTCGAA | 1 cut(s) | 820 |
| Bsp1286I | GDGCHC | 1 cut(s) | 764 |
| Bsp143I | GATC | 4 cut(s) | 153, 285, 567, 1046 |
| BspACI | CCGC | 2 cut(s) | 116, 388 |
| BspANI | GGCC | 5 cut(s) | 74, 391, 839, 1122, 1202 |
| BspLI | GGNNCC | 5 cut(s) | 190, 325, 635, 705, 883 |
| BspPI | GGATC | 2 cut(s) | 575, 1041 |
| BspQI | GCTCTTC | 1 cut(s) | 204 |
| BspT104I | TTCGAA | 1 cut(s) | 820 |
| BspT107I | GGYRCC | 2 cut(s) | 323, 703 |
| BspTNI | GGTCTC | 1 cut(s) | 285 |
| BsrDI | GCAATG | 1 cut(s) | 95 |
| BsrI | ACTGG | 2 cut(s) | 69, 295 |
| BssECI | CCNNGG | 4 cut(s) | 307, 372, 1050, 1091 |
| BssMI | GATC | 4 cut(s) | 153, 285, 567, 1046 |
| BssNI | GRCGYC | 4 cut(s) | 32, 312, 418, 704 |
| BssSI | CACGAG | 2 cut(s) | 552, 1035 |
| BssT1I | CCWWGG | 1 cut(s) | 372 |
| Bst2BI | CACGAG | 2 cut(s) | 552, 1035 |
| Bst2UI | CCWGG | 2 cut(s) | 1092, 1292 |
| Bst4CI | ACNGT | 3 cut(s) | 466, 673, 909 |
| Bst6I | CTCTTC | 4 cut(s) | 204, 462, 852, 1229 |
| BstACI | GRCGYC | 4 cut(s) | 32, 312, 418, 704 |
| BstBI | TTCGAA | 1 cut(s) | 820 |
| BstC8I | GCNNGC | 4 cut(s) | 142, 213, 276, 866 |
| BstDEI | CTNAG | 4 cut(s) | 9, 629, 747, 1002 |
| BstF5I | GGATG | 3 cut(s) | 656, 840, 1011 |
| BstH2I | RGCGCY | 1 cut(s) | 707 |
| BstHHI | GCGC | 2 cut(s) | 706, 791 |
| BstKTI | GATC | 4 cut(s) | 156, 288, 570, 1049 |
| BstMAI | GTCTC | 3 cut(s) | 113, 285, 319 |
| BstMBI | GATC | 4 cut(s) | 153, 285, 567, 1046 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 245, 332, 712 |
| BstNI | CCWGG | 2 cut(s) | 1092, 1292 |
| BstNSI | RCATGY | 2 cut(s) | 695, 895 |
| BstSCI | CCNGG | 4 cut(s) | 412, 1049, 1090, 1290 |
| BstSLI | GKGCMC | 1 cut(s) | 764 |
| BstV1I | GCAGC | 2 cut(s) | 486, 700 |
| BsuRI | GGCC | 5 cut(s) | 74, 391, 839, 1122, 1202 |
| BtsCI | GGATG | 3 cut(s) | 656, 840, 1011 |
| BtsIMutI | CAGTG | 4 cut(s) | 471, 764, 914, 927 |
| Cac8I | GCNNGC | 4 cut(s) | 142, 213, 276, 866 |
| CfoI | GCGC | 2 cut(s) | 706, 791 |
| Cfr13I | GGNCC | 1 cut(s) | 837 |
| CseI | GACGC | 2 cut(s) | 301, 426 |
| Csp6I | GTAC | 2 cut(s) | 664, 917 |
| CviAII | CATG | 5 cut(s) | 220, 358, 692, 851, 892 |
| CviQI | GTAC | 2 cut(s) | 664, 917 |
| DdeI | CTNAG | 4 cut(s) | 9, 629, 747, 1002 |
| DinI | GGCGCC | 1 cut(s) | 705 |
| DpnI | GATC | 4 cut(s) | 155, 287, 569, 1048 |
| DpnII | GATC | 4 cut(s) | 153, 285, 567, 1046 |
| EaeI | YGGCCR | 3 cut(s) | 389, 1120, 1200 |
| Eam1104I | CTCTTC | 4 cut(s) | 204, 462, 852, 1229 |
| EarI | CTCTTC | 4 cut(s) | 204, 462, 852, 1229 |
| Eco130I | CCWWGG | 1 cut(s) | 372 |
| Eco31I | GGTCTC | 1 cut(s) | 285 |
| Eco57I | CTGAAG | 1 cut(s) | 1173 |
| EcoRII | CCWGG | 2 cut(s) | 1090, 1290 |
| EcoT14I | CCWWGG | 1 cut(s) | 372 |
| EgeI | GGCGCC | 1 cut(s) | 705 |
| EheI | GGCGCC | 1 cut(s) | 705 |
| ErhI | CCWWGG | 1 cut(s) | 372 |
| Esp3I | CGTCTC | 2 cut(s) | 113, 319 |
| FaeI | CATG | 5 cut(s) | 223, 361, 695, 854, 895 |
| FatI | CATG | 5 cut(s) | 219, 357, 691, 850, 891 |
| Fnu4HI | GCNGC | 3 cut(s) | 389, 500, 689 |
| FokI | GGATG | 3 cut(s) | 643, 827, 998 |
| Fsp4HI | GCNGC | 3 cut(s) | 389, 500, 689 |
| FspBI | CTAG | 2 cut(s) | 1172, 1191 |
| GlaI | GCGC | 2 cut(s) | 705, 790 |
| GluI | GCNGC | 3 cut(s) | 389, 500, 689 |
| GsaI | CCCAGC | 1 cut(s) | 1044 |
| HaeII | RGCGCY | 1 cut(s) | 707 |
| HaeIII | GGCC | 5 cut(s) | 74, 391, 839, 1122, 1202 |
| HapII | CCGG | 3 cut(s) | 186, 414, 1050 |
| HgaI | GACGC | 2 cut(s) | 301, 426 |
| HhaI | GCGC | 2 cut(s) | 706, 791 |
| Hin1I | GRCGYC | 4 cut(s) | 32, 312, 418, 704 |
| Hin1II | CATG | 5 cut(s) | 223, 361, 695, 854, 895 |
| Hin6I | GCGC | 2 cut(s) | 704, 789 |
| HinP1I | GCGC | 2 cut(s) | 704, 789 |
| HincII | GTYRAC | 1 cut(s) | 676 |
| HindII | GTYRAC | 1 cut(s) | 676 |
| HinfI | GANTC | 3 cut(s) | 224, 368, 1109 |
| HpaII | CCGG | 3 cut(s) | 186, 414, 1050 |
| HphI | GGTGA | 5 cut(s) | 79, 92, 518, 572, 866 |
| Hpy166II | GTNNAC | 4 cut(s) | 83, 563, 676, 762 |
| Hpy188I | TCNGA | 7 cut(s) | 10, 204, 285, 290, 540, 1153, 1184 |
| Hpy188III | TCNNGA | 5 cut(s) | 607, 903, 1082, 1102, 1172 |
| Hpy8I | GTNNAC | 4 cut(s) | 83, 563, 676, 762 |
| Hpy99I | CGWCG | 3 cut(s) | 31, 34, 37 |
| HpyAV | CCTTC | 3 cut(s) | 64, 434, 604 |
| HpyCH4III | ACNGT | 3 cut(s) | 466, 673, 909 |
| HpyCH4IV | ACGT | 2 cut(s) | 32, 1301 |
| HpyCH4V | TGCA | 6 cut(s) | 88, 211, 383, 762, 927, 1058 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 245, 332, 712 |
| HpyF3I | CTNAG | 4 cut(s) | 9, 629, 747, 1002 |
| HpySE526I | ACGT | 2 cut(s) | 32, 1301 |
| Hsp92I | GRCGYC | 4 cut(s) | 32, 312, 418, 704 |
| Hsp92II | CATG | 5 cut(s) | 223, 361, 695, 854, 895 |
| HspAI | GCGC | 2 cut(s) | 704, 789 |
| KasI | GGCGCC | 1 cut(s) | 703 |
| Kzo9I | GATC | 4 cut(s) | 153, 285, 567, 1046 |
| LguI | GCTCTTC | 1 cut(s) | 204 |
| LmnI | GCTCC | 4 cut(s) | 188, 271, 881, 1150 |
| Lsp1109I | GCAGC | 2 cut(s) | 486, 700 |
| LweI | GCATC | 1 cut(s) | 665 |
| MaeI | CTAG | 2 cut(s) | 1172, 1191 |
| MaeII | ACGT | 2 cut(s) | 32, 1301 |
| MaeIII | GTNAC | 3 cut(s) | 437, 1128, 1286 |
| MalI | GATC | 4 cut(s) | 155, 287, 569, 1048 |
| MboI | GATC | 4 cut(s) | 153, 285, 567, 1046 |
| MhlI | GDGCHC | 1 cut(s) | 764 |
| MlsI | TGGCCA | 2 cut(s) | 1122, 1202 |
| MluCI | AATT | 6 cut(s) | 512, 534, 831, 979, 1006, 1166 |
| MluNI | TGGCCA | 2 cut(s) | 1122, 1202 |
| Mly113I | GGCGCC | 1 cut(s) | 704 |
| Mox20I | TGGCCA | 2 cut(s) | 1122, 1202 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1313 |
| MscI | TGGCCA | 2 cut(s) | 1122, 1202 |
| MseI | TTAA | 5 cut(s) | 39, 887, 978, 1283, 1329 |
| MslI | CAYNNNNRTG | 4 cut(s) | 435, 767, 932, 1067 |
| Msp20I | TGGCCA | 2 cut(s) | 1122, 1202 |
| MspI | CCGG | 3 cut(s) | 186, 414, 1050 |
| MspR9I | CCNGG | 4 cut(s) | 414, 1051, 1092, 1292 |
| MvaI | CCWGG | 2 cut(s) | 1092, 1292 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 245, 332, 712 |
| NarI | GGCGCC | 1 cut(s) | 704 |
| NciI | CCSGG | 2 cut(s) | 414, 1051 |
| NdeII | GATC | 4 cut(s) | 153, 285, 567, 1046 |
| NlaIII | CATG | 5 cut(s) | 223, 361, 695, 854, 895 |
| NlaIV | GGNNCC | 5 cut(s) | 190, 325, 635, 705, 883 |
| NmeAIII | GCCGAG | 1 cut(s) | 288 |
| NmuCI | GTSAC | 1 cut(s) | 437 |
| NspI | RCATGY | 2 cut(s) | 695, 895 |
| NspV | TTCGAA | 1 cut(s) | 820 |
| OliI | CACNNNNGTG | 2 cut(s) | 932, 1067 |
| PciI | ACATGT | 1 cut(s) | 891 |
| PciSI | GCTCTTC | 1 cut(s) | 204 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 32, 1042 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1313 |
| PfeI | GAWTC | 3 cut(s) | 224, 368, 1109 |
| PflFI | GACNNNGTC | 1 cut(s) | 31 |
| PkrI | GCNGC | 3 cut(s) | 390, 501, 690 |
| PluTI | GGCGCC | 1 cut(s) | 707 |
| PscI | ACATGT | 1 cut(s) | 891 |
| PshBI | ATTAAT | 1 cut(s) | 978 |
| Psp6I | CCWGG | 2 cut(s) | 1090, 1290 |
| PspFI | CCCAGC | 1 cut(s) | 1040 |
| PspGI | CCWGG | 2 cut(s) | 1090, 1290 |
| PspN4I | GGNNCC | 5 cut(s) | 190, 325, 635, 705, 883 |
| PspPI | GGNCC | 1 cut(s) | 837 |
| PsyI | GACNNNGTC | 1 cut(s) | 31 |
| RsaI | GTAC | 2 cut(s) | 665, 918 |
| RsaNI | GTAC | 2 cut(s) | 664, 917 |
| RseI | CAYNNNNRTG | 4 cut(s) | 435, 767, 932, 1067 |
| SapI | GCTCTTC | 1 cut(s) | 204 |
| SaqAI | TTAA | 5 cut(s) | 39, 887, 978, 1283, 1329 |
| SatI | GCNGC | 3 cut(s) | 389, 500, 689 |
| Sau3AI | GATC | 4 cut(s) | 153, 285, 567, 1046 |
| Sau96I | GGNCC | 1 cut(s) | 837 |
| ScaI | AGTACT | 1 cut(s) | 665 |
| ScrFI | CCNGG | 4 cut(s) | 414, 1051, 1092, 1292 |
| SduI | GDGCHC | 1 cut(s) | 764 |
| SfaNI | GCATC | 1 cut(s) | 665 |
| SfoI | GGCGCC | 1 cut(s) | 705 |
| SfuI | TTCGAA | 1 cut(s) | 820 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 435, 767, 932, 1067 |
| Sse9I | AATT | 6 cut(s) | 512, 534, 831, 979, 1006, 1166 |
| SsiI | CCGC | 2 cut(s) | 116, 388 |
| SspDI | GGCGCC | 1 cut(s) | 703 |
| SspMI | CTAG | 2 cut(s) | 1172, 1191 |
| StyD4I | CCNGG | 4 cut(s) | 412, 1049, 1090, 1290 |
| StyI | CCWWGG | 1 cut(s) | 372 |
| TaaI | ACNGT | 3 cut(s) | 466, 673, 909 |
| TaiI | ACGT | 2 cut(s) | 35, 1304 |
| TaqI | TCGA | 4 cut(s) | 524, 820, 1018, 1208 |
| TasI | AATT | 6 cut(s) | 512, 534, 831, 979, 1006, 1166 |
| TatI | WGTACW | 2 cut(s) | 663, 916 |
| TauI | GCSGC | 1 cut(s) | 391 |
| TfiI | GAWTC | 3 cut(s) | 224, 368, 1109 |
| Tru1I | TTAA | 5 cut(s) | 39, 887, 978, 1283, 1329 |
| Tru9I | TTAA | 5 cut(s) | 39, 887, 978, 1283, 1329 |
| TscAI | CASTG | 4 cut(s) | 471, 764, 914, 934 |
| TseFI | GTSAC | 1 cut(s) | 437 |
| TseI | GCWGC | 2 cut(s) | 499, 688 |
| Tsp45I | GTSAC | 1 cut(s) | 437 |
| TspDTI | ATGAA | 5 cut(s) | 416, 525, 546, 839, 1229 |
| TspGWI | ACGGA | 1 cut(s) | 580 |
| TspRI | CASTG | 4 cut(s) | 471, 764, 914, 934 |
| Tth111I | GACNNNGTC | 1 cut(s) | 31 |
| VneI | GTGCAC | 1 cut(s) | 760 |
| VspI | ATTAAT | 1 cut(s) | 978 |
| XapI | RAATTY | 2 cut(s) | 512, 534 |
| XbaI | TCTAGA | 1 cut(s) | 1171 |
| XceI | RCATGY | 2 cut(s) | 695, 895 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1313 |
| XspI | CTAG | 2 cut(s) | 1172, 1191 |
| ZraI | GACGTC | 1 cut(s) | 33 |
| ZrmI | AGTACT | 1 cut(s) | 665 |