Belongs to the DEAD box helicase family
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0218021 |
| rosa_laevigata | RLG00000002422 |
| rosa_multiflora | Rmu_sc0000870.1_g000002 Rmu_sc0008242.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00241500 |
| rosa_rugosa | Rorug07G0173000 |
| rosa_samantha | Rh7AG315300 Rh7CG332700 Rh7DG313700 |
| rosa_wichuraiana | Rw7G026640 Rw7G026720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 32 |
| AccB1I | GGYRCC | 2 cut(s) | 320, 700 |
| AciI | CCGC | 3 cut(s) | 113, 385, 1130 |
| AclWI | GGATC | 2 cut(s) | 572, 1038 |
| AcoI | YGGCCR | 2 cut(s) | 386, 1197 |
| AcsI | RAATTY | 2 cut(s) | 509, 531 |
| AcuI | CTGAAG | 1 cut(s) | 1170 |
| AcyI | GRCGYC | 4 cut(s) | 29, 309, 415, 701 |
| AfaI | GTAC | 2 cut(s) | 662, 915 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 264, 265, 554, 848 |
| AflIII | ACRYGT | 1 cut(s) | 888 |
| AgsI | TTSAA | 8 cut(s) | 110, 299, 515, 614, 647, 709, 895, 1315 |
| AjiI | CACGTC | 1 cut(s) | 1299 |
| AjnI | CCWGG | 3 cut(s) | 132, 1087, 1287 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1098, 1130, 1295, 1327 |
| AleI | CACNNNNGTG | 2 cut(s) | 929, 1064 |
| AluBI | AGCT | 3 cut(s) | 212, 271, 620 |
| AluI | AGCT | 3 cut(s) | 212, 271, 620 |
| Alw21I | GWGCWC | 1 cut(s) | 761 |
| Alw26I | GTCTC | 3 cut(s) | 110, 282, 316 |
| Alw44I | GTGCAC | 1 cut(s) | 757 |
| AlwI | GGATC | 2 cut(s) | 572, 1038 |
| AoxI | GGCC | 4 cut(s) | 69, 386, 834, 1197 |
| ApaLI | GTGCAC | 1 cut(s) | 757 |
| ApeKI | GCWGC | 2 cut(s) | 496, 685 |
| ApoI | RAATTY | 2 cut(s) | 509, 531 |
| AseI | ATTAAT | 1 cut(s) | 975 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1310 |
| AspLEI | GCGC | 2 cut(s) | 703, 788 |
| AspS9I | GGNCC | 1 cut(s) | 834 |
| AsuC2I | CCSGG | 2 cut(s) | 411, 1048 |
| AsuHPI | GGTGA | 5 cut(s) | 76, 89, 515, 569, 863 |
| AsuII | TTCGAA | 1 cut(s) | 817 |
| BaeGI | GKGCMC | 1 cut(s) | 761 |
| BalI | TGGCCA | 1 cut(s) | 1199 |
| BanI | GGYRCC | 2 cut(s) | 320, 700 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1143, 1175 |
| BauI | CACGAG | 2 cut(s) | 549, 1032 |
| Bbv12I | GWGCWC | 1 cut(s) | 761 |
| BbvI | GCAGC | 2 cut(s) | 483, 697 |
| BccI | CCATC | 4 cut(s) | 845, 964, 1020, 1153 |
| BceAI | ACGGC | 2 cut(s) | 56, 688 |
| BciT130I | CCWGG | 3 cut(s) | 134, 1089, 1289 |
| BcnI | CCSGG | 2 cut(s) | 411, 1048 |
| BcoDI | GTCTC | 3 cut(s) | 110, 282, 316 |
| BfaI | CTAG | 3 cut(s) | 264, 1169, 1188 |
| BfoI | RGCGCY | 1 cut(s) | 704 |
| BisI | GCNGC | 3 cut(s) | 386, 497, 686 |
| BlsI | GCNGC | 3 cut(s) | 387, 498, 687 |
| BmcAI | AGTACT | 1 cut(s) | 662 |
| Bme1390I | CCNGG | 5 cut(s) | 134, 411, 1048, 1089, 1289 |
| BmgBI | CACGTC | 1 cut(s) | 1299 |
| BmgT120I | GGNCC | 1 cut(s) | 834 |
| BmiI | GGNNCC | 5 cut(s) | 187, 322, 632, 702, 880 |
| BmrFI | CCNGG | 5 cut(s) | 134, 411, 1048, 1089, 1289 |
| BmsI | GCATC | 1 cut(s) | 662 |
| Bpu14I | TTCGAA | 1 cut(s) | 817 |
| BpuMI | CCSGG | 2 cut(s) | 411, 1048 |
| BsaBI | GATNNNNATC | 1 cut(s) | 723 |
| BsaHI | GRCGYC | 4 cut(s) | 29, 309, 415, 701 |
| BsaI | GGTCTC | 1 cut(s) | 282 |
| BsaJI | CCNNGG | 4 cut(s) | 132, 304, 1047, 1088 |
| BsaWI | WCCGGW | 1 cut(s) | 182 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 264, 265, 554, 848 |
| Bse1I | ACTGG | 2 cut(s) | 66, 292 |
| Bse3DI | GCAATG | 1 cut(s) | 92 |
| Bse8I | GATNNNNATC | 1 cut(s) | 723 |
| BseBI | CCWGG | 3 cut(s) | 134, 1089, 1289 |
| BseDI | CCNNGG | 4 cut(s) | 132, 304, 1047, 1088 |
| BseGI | GGATG | 3 cut(s) | 653, 837, 1008 |
| BseJI | GATNNNNATC | 1 cut(s) | 723 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 264, 265, 554, 848 |
| BseMI | GCAATG | 1 cut(s) | 92 |
| BseNI | ACTGG | 2 cut(s) | 66, 292 |
| BseRI | GAGGAG | 2 cut(s) | 216, 1274 |
| BseSI | GKGCMC | 1 cut(s) | 761 |
| BseXI | GCAGC | 2 cut(s) | 483, 697 |
| BseYI | CCCAGC | 1 cut(s) | 1037 |
| BsgI | GTGCAG | 1 cut(s) | 907 |
| BshFI | GGCC | 4 cut(s) | 71, 388, 836, 1199 |
| BshNI | GGYRCC | 2 cut(s) | 320, 700 |
| BsiHKAI | GWGCWC | 1 cut(s) | 761 |
| BsiSI | CCGG | 3 cut(s) | 183, 411, 1047 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 264, 265, 554, 848 |
| BsmAI | GTCTC | 3 cut(s) | 110, 282, 316 |
| BsmBI | CGTCTC | 2 cut(s) | 110, 316 |
| BsnI | GGCC | 4 cut(s) | 71, 388, 836, 1199 |
| Bso31I | GGTCTC | 1 cut(s) | 282 |
| Bsp119I | TTCGAA | 1 cut(s) | 817 |
| Bsp1286I | GDGCHC | 1 cut(s) | 761 |
| Bsp143I | GATC | 4 cut(s) | 150, 282, 564, 1043 |
| BspACI | CCGC | 3 cut(s) | 113, 385, 1130 |
| BspANI | GGCC | 4 cut(s) | 71, 388, 836, 1199 |
| BspLI | GGNNCC | 5 cut(s) | 187, 322, 632, 702, 880 |
| BspPI | GGATC | 2 cut(s) | 572, 1038 |
| BspQI | GCTCTTC | 1 cut(s) | 201 |
| BspT104I | TTCGAA | 1 cut(s) | 817 |
| BspT107I | GGYRCC | 2 cut(s) | 320, 700 |
| BspTNI | GGTCTC | 1 cut(s) | 282 |
| BsrDI | GCAATG | 1 cut(s) | 92 |
| BsrI | ACTGG | 2 cut(s) | 66, 292 |
| BssECI | CCNNGG | 4 cut(s) | 132, 304, 1047, 1088 |
| BssMI | GATC | 4 cut(s) | 150, 282, 564, 1043 |
| BssNI | GRCGYC | 4 cut(s) | 29, 309, 415, 701 |
| BssSI | CACGAG | 2 cut(s) | 549, 1032 |
| Bst2BI | CACGAG | 2 cut(s) | 549, 1032 |
| Bst2UI | CCWGG | 3 cut(s) | 134, 1089, 1289 |
| Bst4CI | ACNGT | 3 cut(s) | 463, 670, 906 |
| Bst6I | CTCTTC | 4 cut(s) | 201, 459, 849, 1226 |
| BstACI | GRCGYC | 4 cut(s) | 29, 309, 415, 701 |
| BstBI | TTCGAA | 1 cut(s) | 817 |
| BstC8I | GCNNGC | 5 cut(s) | 139, 210, 273, 863, 1294 |
| BstDEI | CTNAG | 5 cut(s) | 9, 369, 626, 744, 999 |
| BstF5I | GGATG | 3 cut(s) | 653, 837, 1008 |
| BstH2I | RGCGCY | 1 cut(s) | 704 |
| BstHHI | GCGC | 2 cut(s) | 703, 788 |
| BstKTI | GATC | 4 cut(s) | 153, 285, 567, 1046 |
| BstMAI | GTCTC | 3 cut(s) | 110, 282, 316 |
| BstMBI | GATC | 4 cut(s) | 150, 282, 564, 1043 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 242, 329, 709 |
| BstNI | CCWGG | 3 cut(s) | 134, 1089, 1289 |
| BstNSI | RCATGY | 2 cut(s) | 692, 892 |
| BstSCI | CCNGG | 5 cut(s) | 132, 409, 1046, 1087, 1287 |
| BstSLI | GKGCMC | 1 cut(s) | 761 |
| BstV1I | GCAGC | 2 cut(s) | 483, 697 |
| BsuRI | GGCC | 4 cut(s) | 71, 388, 836, 1199 |
| BtrI | CACGTC | 1 cut(s) | 1299 |
| BtsCI | GGATG | 3 cut(s) | 653, 837, 1008 |
| BtsIMutI | CAGTG | 4 cut(s) | 468, 761, 911, 924 |
| Cac8I | GCNNGC | 5 cut(s) | 139, 210, 273, 863, 1294 |
| CfoI | GCGC | 2 cut(s) | 703, 788 |
| Cfr13I | GGNCC | 1 cut(s) | 834 |
| CseI | GACGC | 3 cut(s) | 298, 423, 1165 |
| Csp6I | GTAC | 2 cut(s) | 661, 914 |
| CviAII | CATG | 4 cut(s) | 355, 689, 848, 889 |
| CviQI | GTAC | 2 cut(s) | 661, 914 |
| DdeI | CTNAG | 5 cut(s) | 9, 369, 626, 744, 999 |
| DinI | GGCGCC | 1 cut(s) | 702 |
| DpnI | GATC | 4 cut(s) | 152, 284, 566, 1045 |
| DpnII | GATC | 4 cut(s) | 150, 282, 564, 1043 |
| EaeI | YGGCCR | 2 cut(s) | 386, 1197 |
| Eam1104I | CTCTTC | 4 cut(s) | 201, 459, 849, 1226 |
| EarI | CTCTTC | 4 cut(s) | 201, 459, 849, 1226 |
| Eco31I | GGTCTC | 1 cut(s) | 282 |
| Eco57I | CTGAAG | 1 cut(s) | 1170 |
| EcoRII | CCWGG | 3 cut(s) | 132, 1087, 1287 |
| EgeI | GGCGCC | 1 cut(s) | 702 |
| EheI | GGCGCC | 1 cut(s) | 702 |
| Esp3I | CGTCTC | 2 cut(s) | 110, 316 |
| FaeI | CATG | 4 cut(s) | 358, 692, 851, 892 |
| FatI | CATG | 4 cut(s) | 354, 688, 847, 888 |
| Fnu4HI | GCNGC | 3 cut(s) | 386, 497, 686 |
| FokI | GGATG | 3 cut(s) | 640, 824, 995 |
| Fsp4HI | GCNGC | 3 cut(s) | 386, 497, 686 |
| FspBI | CTAG | 3 cut(s) | 264, 1169, 1188 |
| GlaI | GCGC | 2 cut(s) | 702, 787 |
| GluI | GCNGC | 3 cut(s) | 386, 497, 686 |
| GsaI | CCCAGC | 1 cut(s) | 1041 |
| HaeII | RGCGCY | 1 cut(s) | 704 |
| HaeIII | GGCC | 4 cut(s) | 71, 388, 836, 1199 |
| HapII | CCGG | 3 cut(s) | 183, 411, 1047 |
| HgaI | GACGC | 3 cut(s) | 298, 423, 1165 |
| HhaI | GCGC | 2 cut(s) | 703, 788 |
| Hin1I | GRCGYC | 4 cut(s) | 29, 309, 415, 701 |
| Hin1II | CATG | 4 cut(s) | 358, 692, 851, 892 |
| Hin6I | GCGC | 2 cut(s) | 701, 786 |
| HinP1I | GCGC | 2 cut(s) | 701, 786 |
| HincII | GTYRAC | 1 cut(s) | 673 |
| HindII | GTYRAC | 1 cut(s) | 673 |
| HinfI | GANTC | 3 cut(s) | 221, 365, 1106 |
| HpaII | CCGG | 3 cut(s) | 183, 411, 1047 |
| HphI | GGTGA | 5 cut(s) | 76, 89, 515, 569, 863 |
| Hpy166II | GTNNAC | 4 cut(s) | 80, 560, 673, 759 |
| Hpy188I | TCNGA | 7 cut(s) | 10, 201, 282, 287, 537, 1150, 1181 |
| Hpy188III | TCNNGA | 4 cut(s) | 604, 900, 1079, 1169 |
| Hpy8I | GTNNAC | 4 cut(s) | 80, 560, 673, 759 |
| Hpy99I | CGWCG | 2 cut(s) | 31, 34 |
| HpyAV | CCTTC | 3 cut(s) | 61, 431, 601 |
| HpyCH4III | ACNGT | 3 cut(s) | 463, 670, 906 |
| HpyCH4IV | ACGT | 2 cut(s) | 29, 1298 |
| HpyCH4V | TGCA | 6 cut(s) | 85, 208, 380, 759, 924, 1055 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 242, 329, 709 |
| HpyF3I | CTNAG | 5 cut(s) | 9, 369, 626, 744, 999 |
| HpySE526I | ACGT | 2 cut(s) | 29, 1298 |
| Hsp92I | GRCGYC | 4 cut(s) | 29, 309, 415, 701 |
| Hsp92II | CATG | 4 cut(s) | 358, 692, 851, 892 |
| HspAI | GCGC | 2 cut(s) | 701, 786 |
| KasI | GGCGCC | 1 cut(s) | 700 |
| Kzo9I | GATC | 4 cut(s) | 150, 282, 564, 1043 |
| LguI | GCTCTTC | 1 cut(s) | 201 |
| LmnI | GCTCC | 3 cut(s) | 185, 268, 878 |
| Lsp1109I | GCAGC | 2 cut(s) | 483, 697 |
| LweI | GCATC | 1 cut(s) | 662 |
| MaeI | CTAG | 3 cut(s) | 264, 1169, 1188 |
| MaeII | ACGT | 2 cut(s) | 29, 1298 |
| MaeIII | GTNAC | 3 cut(s) | 434, 1125, 1283 |
| MalI | GATC | 4 cut(s) | 152, 284, 566, 1045 |
| MboI | GATC | 4 cut(s) | 150, 282, 564, 1043 |
| MhlI | GDGCHC | 1 cut(s) | 761 |
| MlsI | TGGCCA | 1 cut(s) | 1199 |
| MluCI | AATT | 6 cut(s) | 509, 531, 828, 976, 1003, 1163 |
| MluNI | TGGCCA | 1 cut(s) | 1199 |
| Mly113I | GGCGCC | 1 cut(s) | 701 |
| Mox20I | TGGCCA | 1 cut(s) | 1199 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1310 |
| MscI | TGGCCA | 1 cut(s) | 1199 |
| MseI | TTAA | 5 cut(s) | 36, 884, 975, 1280, 1326 |
| MslI | CAYNNNNRTG | 4 cut(s) | 432, 764, 929, 1064 |
| Msp20I | TGGCCA | 1 cut(s) | 1199 |
| MspI | CCGG | 3 cut(s) | 183, 411, 1047 |
| MspR9I | CCNGG | 5 cut(s) | 134, 411, 1048, 1089, 1289 |
| MvaI | CCWGG | 3 cut(s) | 134, 1089, 1289 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 242, 329, 709 |
| NarI | GGCGCC | 1 cut(s) | 701 |
| NciI | CCSGG | 2 cut(s) | 411, 1048 |
| NdeII | GATC | 4 cut(s) | 150, 282, 564, 1043 |
| NlaIII | CATG | 4 cut(s) | 358, 692, 851, 892 |
| NlaIV | GGNNCC | 5 cut(s) | 187, 322, 632, 702, 880 |
| NmeAIII | GCCGAG | 1 cut(s) | 285 |
| NmuCI | GTSAC | 1 cut(s) | 434 |
| NspI | RCATGY | 2 cut(s) | 692, 892 |
| NspV | TTCGAA | 1 cut(s) | 817 |
| OliI | CACNNNNGTG | 2 cut(s) | 929, 1064 |
| PciI | ACATGT | 1 cut(s) | 888 |
| PciSI | GCTCTTC | 1 cut(s) | 201 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1039 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1310 |
| PfeI | GAWTC | 3 cut(s) | 221, 365, 1106 |
| PkrI | GCNGC | 3 cut(s) | 387, 498, 687 |
| PluTI | GGCGCC | 1 cut(s) | 704 |
| PscI | ACATGT | 1 cut(s) | 888 |
| PshBI | ATTAAT | 1 cut(s) | 975 |
| Psp6I | CCWGG | 3 cut(s) | 132, 1087, 1287 |
| PspFI | CCCAGC | 1 cut(s) | 1037 |
| PspGI | CCWGG | 3 cut(s) | 132, 1087, 1287 |
| PspN4I | GGNNCC | 5 cut(s) | 187, 322, 632, 702, 880 |
| PspPI | GGNCC | 1 cut(s) | 834 |
| RsaI | GTAC | 2 cut(s) | 662, 915 |
| RsaNI | GTAC | 2 cut(s) | 661, 914 |
| RseI | CAYNNNNRTG | 4 cut(s) | 432, 764, 929, 1064 |
| SapI | GCTCTTC | 1 cut(s) | 201 |
| SaqAI | TTAA | 5 cut(s) | 36, 884, 975, 1280, 1326 |
| SatI | GCNGC | 3 cut(s) | 386, 497, 686 |
| Sau3AI | GATC | 4 cut(s) | 150, 282, 564, 1043 |
| Sau96I | GGNCC | 1 cut(s) | 834 |
| ScaI | AGTACT | 1 cut(s) | 662 |
| ScrFI | CCNGG | 5 cut(s) | 134, 411, 1048, 1089, 1289 |
| SduI | GDGCHC | 1 cut(s) | 761 |
| SfaNI | GCATC | 1 cut(s) | 662 |
| SfoI | GGCGCC | 1 cut(s) | 702 |
| SfuI | TTCGAA | 1 cut(s) | 817 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 432, 764, 929, 1064 |
| Sse9I | AATT | 6 cut(s) | 509, 531, 828, 976, 1003, 1163 |
| SsiI | CCGC | 3 cut(s) | 113, 385, 1130 |
| SspDI | GGCGCC | 1 cut(s) | 700 |
| SspMI | CTAG | 3 cut(s) | 264, 1169, 1188 |
| StyD4I | CCNGG | 5 cut(s) | 132, 409, 1046, 1087, 1287 |
| TaaI | ACNGT | 3 cut(s) | 463, 670, 906 |
| TaiI | ACGT | 2 cut(s) | 32, 1301 |
| TaqI | TCGA | 4 cut(s) | 521, 817, 1015, 1205 |
| TasI | AATT | 6 cut(s) | 509, 531, 828, 976, 1003, 1163 |
| TatI | WGTACW | 2 cut(s) | 660, 913 |
| TauI | GCSGC | 1 cut(s) | 388 |
| TfiI | GAWTC | 3 cut(s) | 221, 365, 1106 |
| Tru1I | TTAA | 5 cut(s) | 36, 884, 975, 1280, 1326 |
| Tru9I | TTAA | 5 cut(s) | 36, 884, 975, 1280, 1326 |
| TscAI | CASTG | 4 cut(s) | 468, 761, 911, 931 |
| TseFI | GTSAC | 1 cut(s) | 434 |
| TseI | GCWGC | 2 cut(s) | 496, 685 |
| Tsp45I | GTSAC | 1 cut(s) | 434 |
| TspDTI | ATGAA | 5 cut(s) | 413, 522, 543, 836, 1226 |
| TspGWI | ACGGA | 1 cut(s) | 577 |
| TspRI | CASTG | 4 cut(s) | 468, 761, 911, 931 |
| VneI | GTGCAC | 1 cut(s) | 757 |
| VspI | ATTAAT | 1 cut(s) | 975 |
| XapI | RAATTY | 2 cut(s) | 509, 531 |
| XbaI | TCTAGA | 1 cut(s) | 1168 |
| XceI | RCATGY | 2 cut(s) | 692, 892 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1310 |
| XspI | CTAG | 3 cut(s) | 264, 1169, 1188 |
| ZraI | GACGTC | 1 cut(s) | 30 |
| ZrmI | AGTACT | 1 cut(s) | 662 |