Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0009832

Physical Location & Seq

Genomic Coordinates Reverse (-)

51831967 .. 52086791

Gene Structure 254825 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000003701

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2493 bp

ATGGCCGCTTCAGGCGGGTATAATTACCGAGATGCCACTACTCAGAGAAGCTCTTTCAAGGTGGATAGGCCTCTTTCTGTCAATTCCAACCCCAAGTCTGCTGTAAAGTCCAAGCCTTTGCTTCCTCCTCGCCGGAACAGCACTGGCTCTATTGGTGGTGCTGCTGCTGGAGCTGCCTCTAAGGATAATACTGGAGTTCCTGGAAGAGTCCGAGTAGCTGTGAGATTGCGGCCACGTAACTCTGATGAAATGATCTCAGATGCTGATTTTGCTGATATTGTAGAATTACAGCCGGAGCTTAAAAGGTTGAAACTTCGGAGAAACAATTGGGACTTGGATACTTATGAGTTCGATGAAGTTCTCACGGAGTTTGCATCACAAAAGCGTGTTTATGAAGTAGTGGCAAAGCCTGTTGTGGAGAGTGTTCTGGAAGGTTATAATGGGACAGTCATGGCATATGGCCAGACTGGTACAGGAAAGACGTATACACTTGGACGACTTGGAGAGGAGGATACTGCTGCTCGTGGAATAATGGTCCGTGCCATGGAGGATATTTTAGCAGATGTATCTCTGGAGTCTGATTCTTTGTCAGTCTCATATCTGCAGCTTTACATGGAAACCATACATGACCTACTTGATCCTGCAAATGATAGCATTTCTATAGTGGAAGACCCCAAAACTGGTGATGTCTCACTACCAGGGGCAAGCCTAGTTGAAATCAGGGACCACAAGAGTTTTGTGGAACTACTAAGATTAGGGGAAGCTCACCGTTTTGCTACGAATACAAAACTGAATACTGAGTCTTCTCGTAGCCATGCTATTCTGATGGTACACGTAAAAAAGTCCGTAAAGGGAAGAGATTCAGCTCTTTCAAGCCAAAATGTCAACAACTCCCACACTGTTAAAAGTCTGAAGCCTCCTGTTGTTCGAAAGAGCAAGTTAATTGTGGTGGATCTTGCTGGTTCAGAGCGTGTCGATAAATCAGGAAGTGAAGGACATACACTAGAGGAAGCCAAATCAATCAATCTCTCGTTAAGTGCACTGGGAAAGTGCATCAATGCATTGGCAGAGAACAGTGCACATATTCCTGTTCGAGATTCAAAACTTACAAGATTGCTTCGGGATTCATTTGGAGGCACAGCAAGAACTTCACTGGTTGTTACCATCGGTCCATCTCCACGTCATCGAGGAGAGACGGCTAGTACTATTATGTTTGGACAGCGGGCTATGAAAGTGGAAAATATGTTGAAATTGAAGGAGGAATTTGACTACAAAAGTTTGTCTAGAAGGCTAGATACACAATTAGACAAACTCATTGCAGAACATGAAAGACAGCAGAAAGCATTTGAGGATGAAATTGAAAGAATAGCCACGGAAGCACAAAATCAGATCTCAGAGGTGGAAAAGAACTATGCAGACGCACTGGAGAAGGAAAGATTGAAATATCAGAAAGACTATATGGAATCAATAAAAAAGCTTGAAGAGCAGTTGGTGATGAATCAGCCAAAGCATGACTTTGAAAAAGTCACAAATGGACCCAAGGATGATAAATCTAATGTGACATCGAGCAAAGAGATTTGCAGGTTACATTTTGAGGAAATTGATGACTTAAGAAAGTTGCTCCAGCGAGAGACAAGTCTTAGGAAGGCTGCTGAAGAGGAAACTAGTAATCTGAAGAGTCAACTGACTCAATGGAAAAGGTCAGAGGCAGCTGGAAATTCAGAGATCTTAAAGCTTCGTAAGATGCTGGAAGAGGAGGCACATCAGAAGGAGAAACTTGAAGGAGAAATAGCAACACTTCACAGTCAATTGTTGCAACTGAGCTTTGATGCTGATGAGACAAGTAGACAACTTGATAGGAGTGGGCTTGGAAACGTTGGTGGCCTTGACTCCCTCATGACTCAAGTTAGGCATCTACAGCTCAAGGAATCAGGAAATGAGGACAAAGCCTCAATAGCAAAAATTTTCGAACAAGTGGGATTGCAAAAGATCTTGTCATTACTTGAAGCTGAAGACAATGATGTGCGAATTCATGCCGTTAAAGTTGTAGCAAATCTTGCTGCTGAAGAAGCAAATCAGGAGAAAATTGTACAAGCTGGTGGTCTCACATCCTTGTTGATGTTACTCAAAACCTCTGACGATGAAACCATACATAGAGTTGCGGCAGGTGCCATTGCAAATTTAGCAATGAATGAAACCAACCAGGAGCTGATAATGAATCAAGGGGGAATTAGTTTGTTATCTATGACAGCAGCCAACGGTGAAGATCCACAAACCCTTCGAATGGTTGCTGGAGCCATTGCTAATCTTTGCGGAAATGATAAATTACAGAGCAAGCTAAGGGCAGAAGGTGGCATTAAGGCATTGCTAGGAATGGTCAGATGTGGGCTTCCAGATGTTCTTGCACAAGTTGCCTGTGGGATTGCAAATTTCACAAAATTCGAGTCTAGGGCATCTACACAAGGGGGACCAAAAATGGAAGGTCTCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04144 ko04728 map04144 map04728

Pfam Domains

Protein Families

Arm Kinesin

Protein Analysis

831

Amino Acids

91.37

Weight (kDa)

6.12

Isoelectric Point (pI)

34.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	68 - 212	4.1e-15	Microtubule binding
Kinesin	PF00225	75 - 412	4.5e-94	Kinesin motor domain
ARM_ARMC5	PF24768	682 - 795	1.2e-12	ARMC5
Arm	PF00514	692 - 729	8.2e-07	Armadillo/beta-catenin-like repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009832)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12430 AT1G12430
fragaria_vesca	FvH4_5g00930 FvH4_5g00930 FvH4_5g00930
malus_domestica	MD04G1077000.v1.1 MD06G1067900.v1.1
prunus_persica	Prupe.5G082300_v2.0.a1 Prupe.5G082300_v2.0.a1
pyrus_communis	pycom04g06770
rosa_chinensis	RchiOBHm_Chr7g0200461
rosa_laevigata	RLG00000003701
rosa_multiflora	Rmu_sc0000617.1_g000027 Rmu_sc0002613.1_g000001
rosa_roxburghii	Rroxscaffold_3G00255950
rosa_rugosa	Rorug07G0060400
rosa_samantha	Rh7AG185900 Rh7BG189000 Rh7CG196200 Rh7DG190000
rosa_wichuraiana	Rw7G016300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	438
AarI	CACCTGC	1 cut(s)	2156
Acc36I	ACCTGC	2 cut(s)	1572, 2156
AccB1I	GGYRCC	1 cut(s)	2168
AccI	GTMKAC	2 cut(s)	485, 1846
AciI	CCGC	6 cut(s)	6, 15, 229, 1222, 2162, 2313
AclI	AACGTT	1 cut(s)	1875
AclWI	GGATC	3 cut(s)	632, 960, 2261
AcoI	YGGCCR	3 cut(s)	3, 230, 460
AcsI	RAATTY	7 cut(s)	1262, 1717, 1962, 2028, 2179, 2428, 2438
AcuI	CTGAAG	5 cut(s)	932, 1674, 1694, 2031, 2085
AfaI	GTAC	4 cut(s)	472, 831, 1204, 2091
AfiI	CCNNNNNNNGG	3 cut(s)	544, 680, 2284
AflII	CTTAAG	1 cut(s)	1609
AflIII	ACRYGT	1 cut(s)	832
AhlI	ACTAGT	1 cut(s)	1664
AjiI	CACGTC	1 cut(s)	1181
AjnI	CCWGG	3 cut(s)	199, 697, 2202
Alw21I	GWGCWC	2 cut(s)	1042, 1081
Alw26I	GTCTC	7 cut(s)	598, 694, 1187, 1625, 1832, 2108, 2489
Alw44I	GTGCAC	2 cut(s)	1038, 1077
AlwI	GGATC	3 cut(s)	632, 960, 2261
AlwNI	CAGNNNCTG	2 cut(s)	263, 2209
AoxI	GGCC	5 cut(s)	3, 68, 230, 460, 1882
ApaLI	GTGCAC	2 cut(s)	1038, 1077
ApeKI	GCWGC	9 cut(s)	161, 164, 173, 518, 604, 1649, 1709, 2060, 2252
ApoI	RAATTY	7 cut(s)	1262, 1717, 1962, 2028, 2179, 2428, 2438
ArsI	GACNNNNNNTTYG	2 cut(s)	2429, 2461
Asp700I	GAANNNNTTC	1 cut(s)	859
AspS9I	GGNCC	5 cut(s)	535, 724, 1169, 1535, 2468
AsuHPI	GGTGA	4 cut(s)	695, 758, 1504, 2273
AsuII	TTCGAA	3 cut(s)	928, 1968, 2281
AvaII	GGWCC	5 cut(s)	535, 724, 1169, 1535, 2468
BaeGI	GKGCMC	2 cut(s)	1042, 1081
BalI	TGGCCA	1 cut(s)	462
BanI	GGYRCC	1 cut(s)	2168
BarI	GAAGNNNNNNTAC	2 cut(s)	1279, 1311
BauI	CACGAG	1 cut(s)	522
BbsI	GAAGAC	3 cut(s)	675, 795, 2019
Bbv12I	GWGCWC	2 cut(s)	1042, 1081
BbvI	GCAGC	9 cut(s)	148, 151, 160, 505, 616, 1636, 1721, 2047, 2264
BccI	CCATC	3 cut(s)	820, 1172, 1180
BceAI	ACGGC	2 cut(s)	1212, 2021
BciT130I	CCWGG	3 cut(s)	201, 699, 2204
BciVI	GTATCC	2 cut(s)	331, 505
BcoDI	GTCTC	7 cut(s)	598, 694, 1187, 1625, 1832, 2108, 2489
BcuI	ACTAGT	1 cut(s)	1664
BfaI	CTAG	8 cut(s)	710, 1004, 1200, 1284, 1292, 1665, 2369, 2448
BfmI	CTRYAG	3 cut(s)	602, 660, 1916
BfrI	CTTAAG	1 cut(s)	1609
BfuAI	ACCTGC	2 cut(s)	1572, 2156
BfuI	GTATCC	2 cut(s)	331, 505
BglII	AGATCT	3 cut(s)	1389, 1725, 1989
BmcAI	AGTACT	1 cut(s)	1204
Bme1390I	CCNGG	3 cut(s)	201, 699, 2204
Bme18I	GGWCC	5 cut(s)	535, 724, 1169, 1535, 2468
BmgBI	CACGTC	1 cut(s)	1181
BmgT120I	GGNCC	5 cut(s)	535, 724, 1169, 1535, 2468
BmiI	GGNNCC	5 cut(s)	725, 1537, 2170, 2296, 2469
BmrFI	CCNGG	3 cut(s)	201, 699, 2204
BmrI	ACTGGG	1 cut(s)	1052
BmsI	GCATC	8 cut(s)	22, 250, 383, 1062, 1734, 1819, 1921, 2462
BmuI	ACTGGG	1 cut(s)	1052
BpiI	GAAGAC	3 cut(s)	675, 795, 2019
BpmI	CTGGAG	6 cut(s)	189, 213, 593, 1445, 1607, 2313
Bpu10I	CCTNAGC	1 cut(s)	2339
Bpu14I	TTCGAA	3 cut(s)	928, 1968, 2281
BpuEI	CTTGAG	2 cut(s)	1887, 1907
BsaAI	YACGTR	2 cut(s)	236, 835
BsaI	GGTCTC	2 cut(s)	2108, 2489
BsaJI	CCNNGG	4 cut(s)	543, 698, 1371, 1539
Bsc4I	CCNNNNNNNGG	3 cut(s)	544, 680, 2284
Bse1I	ACTGG	7 cut(s)	148, 196, 472, 685, 1047, 1158, 1428
Bse3DI	GCAATG	5 cut(s)	1314, 2172, 2193, 2298, 2363
BseBI	CCWGG	3 cut(s)	201, 699, 2204
BseDI	CCNNGG	4 cut(s)	543, 698, 1371, 1539
BseGI	GGATG	3 cut(s)	1357, 1549, 2108
BseLI	CCNNNNNNNGG	3 cut(s)	544, 680, 2284
BseMI	GCAATG	5 cut(s)	1314, 2172, 2193, 2298, 2363
BseMII	CTCAG	5 cut(s)	56, 270, 789, 1407, 1811
BseNI	ACTGG	7 cut(s)	148, 196, 472, 685, 1047, 1158, 1428
BseRI	GAGGAG	4 cut(s)	117, 521, 1203, 1769
BseSI	GKGCMC	2 cut(s)	1042, 1081
BseXI	GCAGC	9 cut(s)	148, 151, 160, 505, 616, 1636, 1721, 2047, 2264
BshFI	GGCC	5 cut(s)	5, 70, 232, 462, 1884
BshNI	GGYRCC	1 cut(s)	2168
BsiHKAI	GWGCWC	2 cut(s)	1042, 1081
BsiSI	CCGG	2 cut(s)	133, 293
BslFI	GGGAC	4 cut(s)	344, 457, 737, 2481
BslI	CCNNNNNNNGG	3 cut(s)	544, 680, 2284
BsmAI	GTCTC	7 cut(s)	598, 694, 1187, 1625, 1832, 2108, 2489
BsmBI	CGTCTC	1 cut(s)	1187
BsmFI	GGGAC	4 cut(s)	344, 457, 737, 2481
BsnI	GGCC	5 cut(s)	5, 70, 232, 462, 1884
Bso31I	GGTCTC	2 cut(s)	2108, 2489
Bsp119I	TTCGAA	3 cut(s)	928, 1968, 2281
Bsp1286I	GDGCHC	2 cut(s)	1042, 1081
Bsp1407I	TGTACA	1 cut(s)	2089
Bsp143I	GATC	7 cut(s)	252, 637, 952, 1389, 1725, 1989, 2266
Bsp19I	CCATGG	1 cut(s)	543
BspACI	CCGC	6 cut(s)	6, 15, 229, 1222, 2162, 2313
BspANI	GGCC	5 cut(s)	5, 70, 232, 462, 1884
BspCNI	CTCAG	5 cut(s)	55, 269, 790, 1406, 1812
BspHI	TCATGA	1 cut(s)	1896
BspLI	GGNNCC	5 cut(s)	725, 1537, 2170, 2296, 2469
BspMAI	CTGCAG	1 cut(s)	606
BspMI	ACCTGC	2 cut(s)	1572, 2156
BspPI	GGATC	3 cut(s)	632, 960, 2261
BspQI	GCTCTTC	1 cut(s)	1476
BspT104I	TTCGAA	3 cut(s)	928, 1968, 2281
BspT107I	GGYRCC	1 cut(s)	2168
BspTI	CTTAAG	1 cut(s)	1609
BspTNI	GGTCTC	2 cut(s)	2108, 2489
BsrDI	GCAATG	5 cut(s)	1314, 2172, 2193, 2298, 2363
BsrGI	TGTACA	1 cut(s)	2089
BsrI	ACTGG	7 cut(s)	148, 196, 472, 685, 1047, 1158, 1428
BssECI	CCNNGG	4 cut(s)	543, 698, 1371, 1539
BssMI	GATC	7 cut(s)	252, 637, 952, 1389, 1725, 1989, 2266
BssNAI	GTATAC	1 cut(s)	486
BssSI	CACGAG	1 cut(s)	522
BssT1I	CCWWGG	2 cut(s)	543, 1539
Bst1107I	GTATAC	1 cut(s)	486
Bst2BI	CACGAG	1 cut(s)	522
Bst2UI	CCWGG	3 cut(s)	201, 699, 2204
Bst4CI	ACNGT	6 cut(s)	448, 770, 901, 1076, 1805, 2261
Bst6I	CTCTTC	6 cut(s)	199, 850, 1476, 1650, 1670, 1746
BstAFI	CTTAAG	1 cut(s)	1609
BstAPI	GCANNNNNTGC	2 cut(s)	2057, 2411
BstAUI	TGTACA	1 cut(s)	2089
BstBAI	YACGTR	2 cut(s)	236, 835
BstBI	TTCGAA	3 cut(s)	928, 1968, 2281
BstC8I	GCNNGC	3 cut(s)	706, 1224, 2336
BstDEI	CTNAG	9 cut(s)	42, 180, 256, 749, 798, 1393, 1640, 1820, 2339
BstDSI	CCRYGG	2 cut(s)	543, 1371
BstF5I	GGATG	3 cut(s)	1357, 1549, 2108
BstKTI	GATC	7 cut(s)	255, 640, 955, 1392, 1728, 1992, 2269
BstMAI	GTCTC	7 cut(s)	598, 694, 1187, 1625, 1832, 2108, 2489
BstMBI	GATC	7 cut(s)	252, 637, 952, 1389, 1725, 1989, 2266
BstNI	CCWGG	3 cut(s)	201, 699, 2204
BstSCI	CCNGG	3 cut(s)	199, 697, 2202
BstSFI	CTRYAG	3 cut(s)	602, 660, 1916
BstSLI	GKGCMC	2 cut(s)	1042, 1081
BstV1I	GCAGC	9 cut(s)	148, 151, 160, 505, 616, 1636, 1721, 2047, 2264
BstV2I	GAAGAC	3 cut(s)	675, 795, 2019
BstX2I	RGATCY	5 cut(s)	952, 1389, 1725, 1989, 2266
BstYI	RGATCY	5 cut(s)	952, 1389, 1725, 1989, 2266
BstZ17I	GTATAC	1 cut(s)	486
BsuI	GTATCC	2 cut(s)	331, 505
BsuRI	GGCC	5 cut(s)	5, 70, 232, 462, 1884
BtgI	CCRYGG	2 cut(s)	543, 1371
BtrI	CACGTC	1 cut(s)	1181
BtsCI	GGATG	3 cut(s)	1357, 1549, 2108
BtsIMutI	CAGTG	6 cut(s)	141, 897, 1040, 1081, 1151, 1421
BveI	ACCTGC	2 cut(s)	1572, 2156
Cac8I	GCNNGC	3 cut(s)	706, 1224, 2336
CaiI	CAGNNNCTG	2 cut(s)	263, 2209
CciI	TCATGA	1 cut(s)	1896
Cfr13I	GGNCC	5 cut(s)	535, 724, 1169, 1535, 2468
CseI	GACGC	1 cut(s)	1427
Csp6I	GTAC	4 cut(s)	471, 830, 1203, 2090
CviAII	CATG	9 cut(s)	451, 544, 613, 626, 815, 1325, 1511, 1897, 2033
CviQI	GTAC	4 cut(s)	471, 830, 1203, 2090
DdeI	CTNAG	9 cut(s)	42, 180, 256, 749, 798, 1393, 1640, 1820, 2339
DpnI	GATC	7 cut(s)	254, 639, 954, 1391, 1727, 1991, 2268
DpnII	GATC	7 cut(s)	252, 637, 952, 1389, 1725, 1989, 2266
EaeI	YGGCCR	3 cut(s)	3, 230, 460
Eam1104I	CTCTTC	6 cut(s)	199, 850, 1476, 1650, 1670, 1746
EarI	CTCTTC	6 cut(s)	199, 850, 1476, 1650, 1670, 1746
Eco130I	CCWWGG	2 cut(s)	543, 1539
Eco147I	AGGCCT	1 cut(s)	70
Eco31I	GGTCTC	2 cut(s)	2108, 2489
Eco47I	GGWCC	5 cut(s)	535, 724, 1169, 1535, 2468
Eco57I	CTGAAG	5 cut(s)	932, 1674, 1694, 2031, 2085
EcoRI	GAATTC	1 cut(s)	2028
EcoRII	CCWGG	3 cut(s)	199, 697, 2202
EcoT14I	CCWWGG	2 cut(s)	543, 1539
EcoT22I	ATGCAT	1 cut(s)	1063
ErhI	CCWWGG	2 cut(s)	543, 1539
Esp3I	CGTCTC	1 cut(s)	1187
FaeI	CATG	9 cut(s)	454, 547, 616, 629, 818, 1328, 1514, 1900, 2036
FalI	AAGNNNNNCTT	2 cut(s)	1499, 1531
FaqI	GGGAC	4 cut(s)	344, 457, 737, 2481
FatI	CATG	9 cut(s)	450, 543, 612, 625, 814, 1324, 1510, 1896, 2032
FauI	CCCGC	2 cut(s)	8, 1215
FauNDI	CATATG	1 cut(s)	457
FblI	GTMKAC	2 cut(s)	485, 1846
FokI	GGATG	3 cut(s)	1364, 1556, 2095
FspBI	CTAG	8 cut(s)	710, 1004, 1200, 1284, 1292, 1665, 2369, 2448
GsuI	CTGGAG	6 cut(s)	189, 213, 593, 1445, 1607, 2313
HaeIII	GGCC	5 cut(s)	5, 70, 232, 462, 1884
HapII	CCGG	2 cut(s)	133, 293
HgaI	GACGC	1 cut(s)	1427
Hin1II	CATG	9 cut(s)	454, 547, 616, 629, 818, 1328, 1514, 1900, 2036
HincII	GTYRAC	2 cut(s)	886, 1682
HindII	GTYRAC	2 cut(s)	886, 1682
HindIII	AAGCTT	2 cut(s)	1475, 1733
HpaII	CCGG	2 cut(s)	133, 293
HphI	GGTGA	4 cut(s)	695, 758, 1504, 2273
Hpy166II	GTNNAC	7 cut(s)	486, 832, 886, 1040, 1079, 1682, 1847
Hpy8I	GTNNAC	7 cut(s)	486, 832, 886, 1040, 1079, 1682, 1847
HpyCH4III	ACNGT	6 cut(s)	448, 770, 901, 1076, 1805, 2261
HpyCH4IV	ACGT	5 cut(s)	235, 482, 834, 1180, 1875
HpyF3I	CTNAG	9 cut(s)	42, 180, 256, 749, 798, 1393, 1640, 1820, 2339
HpySE526I	ACGT	5 cut(s)	235, 482, 834, 1180, 1875
Hsp92II	CATG	9 cut(s)	454, 547, 616, 629, 818, 1328, 1514, 1900, 2036
Kzo9I	GATC	7 cut(s)	252, 637, 952, 1389, 1725, 1989, 2266
LguI	GCTCTTC	1 cut(s)	1476
LmnI	GCTCC	5 cut(s)	170, 295, 1626, 2206, 2294
Lsp1109I	GCAGC	9 cut(s)	148, 151, 160, 505, 616, 1636, 1721, 2047, 2264
LweI	GCATC	8 cut(s)	22, 250, 383, 1062, 1734, 1819, 1921, 2462
MaeI	CTAG	8 cut(s)	710, 1004, 1200, 1284, 1292, 1665, 2369, 2448
MaeII	ACGT	5 cut(s)	235, 482, 834, 1180, 1875
MaeIII	GTNAC	6 cut(s)	236, 1159, 1525, 1558, 1584, 2121
MalI	GATC	7 cut(s)	254, 639, 954, 1391, 1727, 1991, 2268
MboI	GATC	7 cut(s)	252, 637, 952, 1389, 1725, 1989, 2266
MfeI	CAATTG	2 cut(s)	325, 1808
MflI	RGATCY	5 cut(s)	952, 1389, 1725, 1989, 2266
MhlI	GDGCHC	2 cut(s)	1042, 1081
MlsI	TGGCCA	1 cut(s)	462
MluNI	TGGCCA	1 cut(s)	462
MlyI	GAGTC	8 cut(s)	216, 584, 809, 1681, 1687, 1883, 1894, 2453
MmeI	TCCRAC	1 cut(s)	111
Mox20I	TGGCCA	1 cut(s)	462
Mph1103I	ATGCAT	1 cut(s)	1063
MroXI	GAANNNNTTC	1 cut(s)	859
MscI	TGGCCA	1 cut(s)	462
MseI	TTAA	8 cut(s)	300, 903, 941, 1034, 1610, 1730, 2040, 2358
Msp20I	TGGCCA	1 cut(s)	462
MspA1I	CMGCKG	2 cut(s)	1222, 1712
MspCI	CTTAAG	1 cut(s)	1609
MspI	CCGG	2 cut(s)	133, 293
MspR9I	CCNGG	3 cut(s)	201, 699, 2204
MunI	CAATTG	2 cut(s)	325, 1808
MvaI	CCWGG	3 cut(s)	201, 699, 2204
NcoI	CCATGG	1 cut(s)	543
NdeI	CATATG	1 cut(s)	457
NdeII	GATC	7 cut(s)	252, 637, 952, 1389, 1725, 1989, 2266
NlaIII	CATG	9 cut(s)	454, 547, 616, 629, 818, 1328, 1514, 1900, 2036
NlaIV	GGNNCC	5 cut(s)	725, 1537, 2170, 2296, 2469
NmuCI	GTSAC	2 cut(s)	1525, 1558
NsiI	ATGCAT	1 cut(s)	1063
NspV	TTCGAA	3 cut(s)	928, 1968, 2281
PagI	TCATGA	1 cut(s)	1896
PaqCI	CACCTGC	1 cut(s)	2156
PceI	AGGCCT	1 cut(s)	70
PciSI	GCTCTTC	1 cut(s)	1476
PdmI	GAANNNNTTC	1 cut(s)	859
PfeI	GAWTC	8 cut(s)	581, 860, 1097, 1124, 1463, 1498, 1928, 2218
PfoI	TCCNGGA	1 cut(s)	199
PleI	GAGTC	8 cut(s)	215, 583, 808, 1681, 1686, 1883, 1894, 2452
PpsI	GAGTC	8 cut(s)	215, 583, 808, 1681, 1686, 1883, 1894, 2452
Ppu21I	YACGTR	2 cut(s)	236, 835
PsiI	TTATAA	1 cut(s)	438
Psp1406I	AACGTT	1 cut(s)	1875
Psp6I	CCWGG	3 cut(s)	199, 697, 2202
PspGI	CCWGG	3 cut(s)	199, 697, 2202
PspN4I	GGNNCC	5 cut(s)	725, 1537, 2170, 2296, 2469
PspPI	GGNCC	5 cut(s)	535, 724, 1169, 1535, 2468
PstI	CTGCAG	1 cut(s)	606
PstNI	CAGNNNCTG	2 cut(s)	263, 2209
PsuI	RGATCY	5 cut(s)	952, 1389, 1725, 1989, 2266
PvuII	CAGCTG	1 cut(s)	1712
RsaI	GTAC	4 cut(s)	472, 831, 1204, 2091
RsaNI	GTAC	4 cut(s)	471, 830, 1203, 2090
SapI	GCTCTTC	1 cut(s)	1476
SaqAI	TTAA	8 cut(s)	300, 903, 941, 1034, 1610, 1730, 2040, 2358
Sau3AI	GATC	7 cut(s)	252, 637, 952, 1389, 1725, 1989, 2266
Sau96I	GGNCC	5 cut(s)	535, 724, 1169, 1535, 2468
ScaI	AGTACT	1 cut(s)	1204
SchI	GAGTC	8 cut(s)	216, 584, 809, 1681, 1687, 1883, 1894, 2453
ScrFI	CCNGG	3 cut(s)	201, 699, 2204
SduI	GDGCHC	2 cut(s)	1042, 1081
SfaNI	GCATC	8 cut(s)	22, 250, 383, 1062, 1734, 1819, 1921, 2462
SfcI	CTRYAG	3 cut(s)	602, 660, 1916
SfuI	TTCGAA	3 cut(s)	928, 1968, 2281
SinI	GGWCC	5 cut(s)	535, 724, 1169, 1535, 2468
SmlI	CTYRAG	3 cut(s)	1609, 1902, 1922
SmoI	CTYRAG	3 cut(s)	1609, 1902, 1922
SpeI	ACTAGT	1 cut(s)	1664
SseBI	AGGCCT	1 cut(s)	70
SsiI	CCGC	6 cut(s)	6, 15, 229, 1222, 2162, 2313
SspMI	CTAG	8 cut(s)	710, 1004, 1200, 1284, 1292, 1665, 2369, 2448
StuI	AGGCCT	1 cut(s)	70
StyD4I	CCNGG	3 cut(s)	199, 697, 2202
StyI	CCWWGG	2 cut(s)	543, 1539
TaaI	ACNGT	6 cut(s)	448, 770, 901, 1076, 1805, 2261
TaiI	ACGT	5 cut(s)	238, 485, 837, 1183, 1878
TaqI	TCGA	9 cut(s)	351, 928, 975, 1093, 1186, 1565, 1968, 2281, 2442
TaqII	GACCGA	1 cut(s)	1157
TatI	WGTACW	2 cut(s)	1202, 2089
TauI	GCSGC	3 cut(s)	8, 232, 2165
TfiI	GAWTC	8 cut(s)	581, 860, 1097, 1124, 1463, 1498, 1928, 2218
Tru1I	TTAA	8 cut(s)	300, 903, 941, 1034, 1610, 1730, 2040, 2358
Tru9I	TTAA	8 cut(s)	300, 903, 941, 1034, 1610, 1730, 2040, 2358
TscAI	CASTG	6 cut(s)	148, 904, 1047, 1081, 1158, 1428
TseFI	GTSAC	2 cut(s)	1525, 1558
TseI	GCWGC	9 cut(s)	161, 164, 173, 518, 604, 1649, 1709, 2060, 2252
Tsp45I	GTSAC	2 cut(s)	1525, 1558
TspGWI	ACGGA	4 cut(s)	380, 527, 835, 1388
TspRI	CASTG	6 cut(s)	148, 904, 1047, 1081, 1158, 1428
Vha464I	CTTAAG	1 cut(s)	1609
VneI	GTGCAC	2 cut(s)	1038, 1077
VpaK11BI	GGWCC	5 cut(s)	535, 724, 1169, 1535, 2468
XapI	RAATTY	7 cut(s)	1262, 1717, 1962, 2028, 2179, 2428, 2438
XbaI	TCTAGA	1 cut(s)	1283
XmiI	GTMKAC	2 cut(s)	485, 1846
XmnI	GAANNNNTTC	1 cut(s)	859
XspI	CTAG	8 cut(s)	710, 1004, 1200, 1284, 1292, 1665, 2369, 2448
ZrmI	AGTACT	1 cut(s)	1204
Zsp2I	ATGCAT	1 cut(s)	1063

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.