Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0009832

Physical Location & Seq

Genomic Coordinates Forward (+)

16477309 .. 16488131

Gene Structure 10823 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG185900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2505 bp

ATGATCTCAGATGCTGATTTTGCTGAAATTGTAGAATTACAGCCAGAGCTTAAAAGGTTGAAACTTCGGAGAAACAATTGGGACTTGGATACTTATGAGTTCGATGAAGTTCTCACAGAGTTTGCATCACAAAAGCGTGTTTATGAAGTAGTGGCAAAGCCTGTTGTGGAGAGTGTTCTGGAAGGTTATAATGGGACAGTCATGGCATATGGCCAGACTGGTACAGGAAAGACGTATACACTTGGACGACTTGGAGAGGAGGATACTGCTGCTCGTGGAATAATGGTCCGTGCCATGGAGGATATTTTAGCAGATGTATCTCTGGAGTCTGATTCTTTGTCAGTCTCGTATCTGCAGCTTTACATGGAAACCATACATGACCTACTCGATCCTGCAAATGATAGCATTTCTATAGTGGAAGACCCCAAAACTGGTGATGTCTCACTACCAGGGGCAAGCCTAGTTGAAATCAGGGACCACAAGAGTTTCGTGGAACTACTAAGATTAGGGGAAGCTCACCGCTTTGCTACCAATACAAAACTGAACACTGAGTCTTCTCGTAGCCATGCTATTCTGATGGTACACGTAAAAAAGTCTGTAAAGGGAAGAGATTCAGCTCTTTCAAGCCAAAATGTCAACAACTCCCACACTGTTAAAAGTCTGAAGCCTCCTGTTGTTCGAAAGAGCAAGTTAATTGTGGTGGATCTTGCTGGTTCAGAGCGTATCGACAAATCAGGAAGTGAAGGACATACACTAGAGGAAGCCAAATCAATCAATCTCTCGTTAAGTGCACTGGGAAAGTGCATCAATGCATTGGCAGAGAACAGTGCGCATATTCCTGTTCGAGATTCAAAACTTACAAGATTGCTTCGGGATTCATTTGGAGGCACAGCAAGAACATCACTGGTTGTTACTATCGGTCCATCTCCACGTCATCGAGGAGAGACGGCTAGTACTATTATGTTTGGACAGCGGGCTATGAAAGTGGAAAATATGTTGAAATTGAAGGAGGAATTTGACTACAAAAGTTTGTCTAGAAGGTTAGATATACAATTAGACAAACTCATTGCAGAACATGAAAGACAGCAGAAAGCATTTGAGGATGAGATTGAAAGAATAGCCGCGGAAGCACAAAATCAGATCACAGAGGTTGAAAAGAACTATGCAGATGCACTGGAGAAGGAAAGATTGAAATATCAGAAAGACTATATGGAATCAATAAAAAAGCTTGAAGAGCAGTTGGTGATGAATCAGCCAAAGCATGACTTTGAAAAAGTCACAAATGGACCCAAGGACGATAAATCTAATGTGACATCGAGCAAAGAGATTTGCAGGTTGCATGTTGAGGAAATTGATGACTTAAGAAAGTTGCTCCAGCGAGAGACAAGTCTTAGGAAGGCTGCTGAAGAGGAAACTAGTAATCTGAAGAGTCAACTGACTCAATGGAAAAGGTCAGAGGCAGCTGGAAATTCAGAGATCTTAAAGCTTCGTAAGATGCTGGAAGATGAAGCACATCAGAAGGAGAAACTTGAAGGAGAAATAGCAACACTTCGCAGTCAATTGTTGCAACTGAGCTTTGATGCTGATGAGACAAGTAGACAACTTGATAGGAGTGGGCTTGGAAAAGTTGGTGGCCTTGACTCCCTCATGACTCAAGTTAGGCATCTGCAGCTCAAGGAATCAGGAAATGAGGACAAAGCCTCAATAGCAAAAATTTTCGAACAAGTGGGATTGCAAAAGATCTTGTCATTACTTGAAGCTGAAGACAATGATGTGCGAATTCATGCCGTTAAAGTTGTAGCAAATCTTGCTGCTGAAGAAGCAAATCAGGAGAAAATTGTAGAAGCTGGTGGTCTCACATCCTTGTTGATGTTACTCAAAACCTCTGACGATGAAACCATACATAGAGTTGCGGCAGGTGCCATCGCAAATTTAGCAATGAACGAAACCAACCAGGAGCTGATAATGAATCAAGGGGGAATTAGTTTGTTATCTATGACAGCAGCCAACGGTGAAGATCCACAAACCCTTCGAATGGTTGCTGGAGCCATTGCTAATCTTTGCGGAAATGATAAATTACAGAGCAAGCTAAGGGCTGAAGGTGGAATTAAGGCATTGCTAGGAATGGTCAGATGTGGGCATCCAGATGTTCTTGCACAAGTTGCTCGTGGGATTGCAAATTTCGCAAAATGCGAGTCTAGGGCATCTACACAAGGGACCAAAAATGGAAGATCTCTTTTGATCGAGGACGGTGCACTTTCATGGATTGTACAGAATGCTAATAATGAAGCCTCACCAATCAGGCGCCACATTGAGCTAGCACTATGCCACTTAGCACAACATGAAACAAATGCAAAAGACATGATCAGTGGTGGTGCCTTGTGGGAGCTTGTTCGCATTTCCCGAGACTGTTCACGCGAAGACATAAGAACTCTTGCATATCGAACACTAACTTCTAGCCCCACCTTCCAAGGTGAACTGAGGCGGCTGCGGATAGATAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04144 ko04728 map04144 map04728

Pfam Domains

Protein Families

Arm Kinesin

Protein Analysis

834

Amino Acids

92.6

Weight (kDa)

5.81

Isoelectric Point (pI)

37.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Kinesin	PF00225	16 - 329	6e-92	Kinesin motor domain
Microtub_bd	PF16796	29 - 129	1.7e-12	Microtubule binding
ARM_ARMC5	PF24768	599 - 803	1.7e-15	ARMC5
Arm	PF00514	609 - 646	1e-06	Armadillo/beta-catenin-like repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009832)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12430 AT1G12430
fragaria_vesca	FvH4_5g00930 FvH4_5g00930 FvH4_5g00930
malus_domestica	MD04G1077000.v1.1 MD06G1067900.v1.1
prunus_persica	Prupe.5G082300_v2.0.a1 Prupe.5G082300_v2.0.a1
pyrus_communis	pycom04g06770
rosa_chinensis	RchiOBHm_Chr7g0200461
rosa_laevigata	RLG00000003701
rosa_multiflora	Rmu_sc0000617.1_g000027 Rmu_sc0002613.1_g000001
rosa_roxburghii	Rroxscaffold_3G00255950
rosa_rugosa	Rorug07G0060400
rosa_samantha	Rh7AG185900 Rh7BG189000 Rh7CG196200 Rh7DG190000
rosa_wichuraiana	Rw7G016300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	189
AarI	CACCTGC	1 cut(s)	1907
Acc16I	TGCGCA	1 cut(s)	831
Acc36I	ACCTGC	2 cut(s)	1323, 1907
AccB1I	GGYRCC	3 cut(s)	1919, 2304, 2375
AccI	GTMKAC	2 cut(s)	236, 1597
AccII	CGCG	2 cut(s)	1124, 2418
AciI	CCGC	8 cut(s)	520, 973, 1122, 1124, 1913, 2064, 2485, 2491
AclWI	GGATC	3 cut(s)	383, 711, 2012
AcoI	YGGCCR	1 cut(s)	211
AcsI	RAATTY	6 cut(s)	1013, 1468, 1713, 1779, 1930, 2179
AcuI	CTGAAG	6 cut(s)	683, 1425, 1445, 1782, 1836, 2118
AcyI	GRCGYC	1 cut(s)	2305
AfaI	GTAC	4 cut(s)	223, 582, 955, 2271
AfiI	CCNNNNNNNGG	3 cut(s)	295, 431, 2035
AflII	CTTAAG	1 cut(s)	1360
AflIII	ACRYGT	1 cut(s)	583
AhlI	ACTAGT	1 cut(s)	1415
AjiI	CACGTC	1 cut(s)	932
AjnI	CCWGG	2 cut(s)	448, 1953
Alw21I	GWGCWC	2 cut(s)	793, 2257
Alw26I	GTCTC	7 cut(s)	349, 445, 938, 1376, 1583, 1859, 2400
Alw44I	GTGCAC	2 cut(s)	789, 2253
AlwI	GGATC	3 cut(s)	383, 711, 2012
AlwNI	CAGNNNCTG	2 cut(s)	14, 1960
Ama87I	CYCGRG	1 cut(s)	2403
AoxI	GGCC	2 cut(s)	211, 1633
ApaLI	GTGCAC	2 cut(s)	789, 2253
ApeKI	GCWGC	8 cut(s)	269, 355, 1400, 1460, 1669, 1811, 2003, 2488
ApoI	RAATTY	6 cut(s)	1013, 1468, 1713, 1779, 1930, 2179
ArsI	GACNNNNNNTTYG	2 cut(s)	2180, 2212
Asp700I	GAANNNNTTC	1 cut(s)	610
AspLEI	GCGC	2 cut(s)	832, 2307
AspS9I	GGNCC	5 cut(s)	286, 475, 920, 1286, 2217
AsuHPI	GGTGA	6 cut(s)	446, 509, 1255, 2024, 2286, 2486
AsuII	TTCGAA	3 cut(s)	679, 1719, 2032
AsuNHI	GCTAGC	1 cut(s)	2317
AvaI	CYCGRG	1 cut(s)	2403
AvaII	GGWCC	5 cut(s)	286, 475, 920, 1286, 2217
BaeGI	GKGCMC	2 cut(s)	793, 2257
BalI	TGGCCA	1 cut(s)	213
BanI	GGYRCC	3 cut(s)	1919, 2304, 2375
BauI	CACGAG	2 cut(s)	273, 2166
BbsI	GAAGAC	4 cut(s)	426, 546, 1770, 2427
Bbv12I	GWGCWC	2 cut(s)	793, 2257
BbvI	GCAGC	8 cut(s)	256, 367, 1387, 1472, 1681, 1798, 2015, 2475
BccI	CCATC	3 cut(s)	571, 931, 1931
BceAI	ACGGC	2 cut(s)	963, 1772
BcgI	CGANNNNNNTGC	2 cut(s)	2234, 2268
BciT130I	CCWGG	2 cut(s)	450, 1955
BciVI	GTATCC	2 cut(s)	82, 256
BclI	TGATCA	1 cut(s)	2364
BcoDI	GTCTC	7 cut(s)	349, 445, 938, 1376, 1583, 1859, 2400
BcuI	ACTAGT	1 cut(s)	1415
BfaI	CTAG	9 cut(s)	461, 755, 951, 1035, 1416, 2120, 2199, 2318, 2457
BfmI	CTRYAG	3 cut(s)	353, 411, 1667
BfoI	RGCGCY	1 cut(s)	2308
BfrI	CTTAAG	1 cut(s)	1360
BfuAI	ACCTGC	2 cut(s)	1323, 1907
BfuI	GTATCC	2 cut(s)	82, 256
BglII	AGATCT	3 cut(s)	1476, 1740, 2231
BmcAI	AGTACT	1 cut(s)	955
Bme1390I	CCNGG	2 cut(s)	450, 1955
Bme18I	GGWCC	5 cut(s)	286, 475, 920, 1286, 2217
BmeT110I	CYCGRG	1 cut(s)	2403
BmgBI	CACGTC	1 cut(s)	932
BmgT120I	GGNCC	5 cut(s)	286, 475, 920, 1286, 2217
BmiI	GGNNCC	7 cut(s)	476, 1288, 1921, 2047, 2218, 2306, 2377
BmrFI	CCNGG	2 cut(s)	450, 1955
BmrI	ACTGGG	1 cut(s)	803
BmsI	GCATC	8 cut(s)	134, 813, 1159, 1485, 1570, 1672, 2149, 2213
BmtI	GCTAGC	1 cut(s)	2321
BmuI	ACTGGG	1 cut(s)	803
BpiI	GAAGAC	4 cut(s)	426, 546, 1770, 2427
BpmI	CTGGAG	4 cut(s)	344, 1196, 1358, 2064
Bpu10I	CCTNAGC	1 cut(s)	2090
Bpu14I	TTCGAA	3 cut(s)	679, 1719, 2032
BpuEI	CTTGAG	2 cut(s)	1638, 1658
BsaAI	YACGTR	1 cut(s)	586
BsaHI	GRCGYC	1 cut(s)	2305
BsaI	GGTCTC	1 cut(s)	1859
BsaJI	CCNNGG	5 cut(s)	294, 449, 1122, 1290, 2470
Bsc4I	CCNNNNNNNGG	3 cut(s)	295, 431, 2035
Bse1I	ACTGG	5 cut(s)	223, 436, 798, 909, 1179
Bse3DI	GCAATG	4 cut(s)	1065, 1944, 2049, 2114
BseBI	CCWGG	2 cut(s)	450, 1955
BseDI	CCNNGG	5 cut(s)	294, 449, 1122, 1290, 2470
BseGI	GGATG	3 cut(s)	1108, 1859, 2140
BseLI	CCNNNNNNNGG	3 cut(s)	295, 431, 2035
BseMI	GCAATG	4 cut(s)	1065, 1944, 2049, 2114
BseMII	CTCAG	4 cut(s)	21, 540, 1562, 2471
BseNI	ACTGG	5 cut(s)	223, 436, 798, 909, 1179
BseRI	GAGGAG	2 cut(s)	272, 954
BseSI	GKGCMC	2 cut(s)	793, 2257
BseXI	GCAGC	8 cut(s)	256, 367, 1387, 1472, 1681, 1798, 2015, 2475
Bsh1236I	CGCG	2 cut(s)	1124, 2418
BshFI	GGCC	2 cut(s)	213, 1635
BshNI	GGYRCC	3 cut(s)	1919, 2304, 2375
BsiHKAI	GWGCWC	2 cut(s)	793, 2257
BsiHKCI	CYCGRG	1 cut(s)	2403
BslFI	GGGAC	4 cut(s)	95, 208, 488, 2230
BslI	CCNNNNNNNGG	3 cut(s)	295, 431, 2035
BsmAI	GTCTC	7 cut(s)	349, 445, 938, 1376, 1583, 1859, 2400
BsmBI	CGTCTC	1 cut(s)	938
BsmFI	GGGAC	4 cut(s)	95, 208, 488, 2230
BsmI	GAATGC	1 cut(s)	2281
BsnI	GGCC	2 cut(s)	213, 1635
Bso31I	GGTCTC	1 cut(s)	1859
BsoBI	CYCGRG	1 cut(s)	2403
Bsp119I	TTCGAA	3 cut(s)	679, 1719, 2032
Bsp1286I	GDGCHC	2 cut(s)	793, 2257
Bsp1407I	TGTACA	1 cut(s)	2269
Bsp19I	CCATGG	1 cut(s)	294
BspACI	CCGC	8 cut(s)	520, 973, 1122, 1124, 1913, 2064, 2485, 2491
BspANI	GGCC	2 cut(s)	213, 1635
BspCNI	CTCAG	4 cut(s)	20, 541, 1563, 2472
BspFNI	CGCG	2 cut(s)	1124, 2418
BspHI	TCATGA	1 cut(s)	1647
BspLI	GGNNCC	7 cut(s)	476, 1288, 1921, 2047, 2218, 2306, 2377
BspMAI	CTGCAG	2 cut(s)	357, 1671
BspMI	ACCTGC	2 cut(s)	1323, 1907
BspOI	GCTAGC	1 cut(s)	2321
BspPI	GGATC	3 cut(s)	383, 711, 2012
BspQI	GCTCTTC	1 cut(s)	1227
BspT104I	TTCGAA	3 cut(s)	679, 1719, 2032
BspT107I	GGYRCC	3 cut(s)	1919, 2304, 2375
BspTI	CTTAAG	1 cut(s)	1360
BspTNI	GGTCTC	1 cut(s)	1859
BsrDI	GCAATG	4 cut(s)	1065, 1944, 2049, 2114
BsrGI	TGTACA	1 cut(s)	2269
BsrI	ACTGG	5 cut(s)	223, 436, 798, 909, 1179
BssECI	CCNNGG	5 cut(s)	294, 449, 1122, 1290, 2470
BssNAI	GTATAC	1 cut(s)	237
BssNI	GRCGYC	1 cut(s)	2305
BssSI	CACGAG	2 cut(s)	273, 2166
BssT1I	CCWWGG	3 cut(s)	294, 1290, 2470
Bst1107I	GTATAC	1 cut(s)	237
Bst2BI	CACGAG	2 cut(s)	273, 2166
Bst2UI	CCWGG	2 cut(s)	450, 1955
Bst4CI	ACNGT	6 cut(s)	199, 652, 827, 2012, 2252, 2411
Bst6I	CTCTTC	4 cut(s)	601, 1227, 1401, 1421
BstACI	GRCGYC	1 cut(s)	2305
BstAFI	CTTAAG	1 cut(s)	1360
BstAPI	GCANNNNNTGC	2 cut(s)	1808, 2162
BstAUI	TGTACA	1 cut(s)	2269
BstBAI	YACGTR	1 cut(s)	586
BstBI	TTCGAA	3 cut(s)	679, 1719, 2032
BstC8I	GCNNGC	4 cut(s)	457, 975, 2087, 2319
BstDEI	CTNAG	8 cut(s)	7, 500, 549, 1391, 1571, 2090, 2332, 2480
BstDSI	CCRYGG	2 cut(s)	294, 1122
BstF5I	GGATG	3 cut(s)	1108, 1859, 2140
BstFNI	CGCG	2 cut(s)	1124, 2418
BstH2I	RGCGCY	1 cut(s)	2308
BstHHI	GCGC	2 cut(s)	832, 2307
BstMAI	GTCTC	7 cut(s)	349, 445, 938, 1376, 1583, 1859, 2400
BstNI	CCWGG	2 cut(s)	450, 1955
BstNSI	RCATGY	1 cut(s)	1343
BstSCI	CCNGG	2 cut(s)	448, 1953
BstSFI	CTRYAG	3 cut(s)	353, 411, 1667
BstSLI	GKGCMC	2 cut(s)	793, 2257
BstUI	CGCG	2 cut(s)	1124, 2418
BstV1I	GCAGC	8 cut(s)	256, 367, 1387, 1472, 1681, 1798, 2015, 2475
BstV2I	GAAGAC	4 cut(s)	426, 546, 1770, 2427
BstX2I	RGATCY	5 cut(s)	703, 1476, 1740, 2017, 2231
BstYI	RGATCY	5 cut(s)	703, 1476, 1740, 2017, 2231
BstZ17I	GTATAC	1 cut(s)	237
BsuI	GTATCC	2 cut(s)	82, 256
BsuRI	GGCC	2 cut(s)	213, 1635
BtgI	CCRYGG	2 cut(s)	294, 1122
BtgZI	GCGATG	1 cut(s)	1909
BtrI	CACGTC	1 cut(s)	932
BtsCI	GGATG	3 cut(s)	1108, 1859, 2140
BtsIMutI	CAGTG	7 cut(s)	546, 648, 791, 832, 902, 1172, 2374
BveI	ACCTGC	2 cut(s)	1323, 1907
Cac8I	GCNNGC	4 cut(s)	457, 975, 2087, 2319
CaiI	CAGNNNCTG	2 cut(s)	14, 1960
CciI	TCATGA	1 cut(s)	1647
CfoI	GCGC	2 cut(s)	832, 2307
Cfr13I	GGNCC	5 cut(s)	286, 475, 920, 1286, 2217
Cfr42I	CCGCGG	1 cut(s)	1125
Csp6I	GTAC	4 cut(s)	222, 581, 954, 2270
CviQI	GTAC	4 cut(s)	222, 581, 954, 2270
DdeI	CTNAG	8 cut(s)	7, 500, 549, 1391, 1571, 2090, 2332, 2480
DinI	GGCGCC	1 cut(s)	2306
EaeI	YGGCCR	1 cut(s)	211
Eam1104I	CTCTTC	4 cut(s)	601, 1227, 1401, 1421
EarI	CTCTTC	4 cut(s)	601, 1227, 1401, 1421
Eco130I	CCWWGG	3 cut(s)	294, 1290, 2470
Eco31I	GGTCTC	1 cut(s)	1859
Eco47I	GGWCC	5 cut(s)	286, 475, 920, 1286, 2217
Eco57I	CTGAAG	6 cut(s)	683, 1425, 1445, 1782, 1836, 2118
Eco88I	CYCGRG	1 cut(s)	2403
EcoRI	GAATTC	1 cut(s)	1779
EcoRII	CCWGG	2 cut(s)	448, 1953
EcoT14I	CCWWGG	3 cut(s)	294, 1290, 2470
EcoT22I	ATGCAT	1 cut(s)	814
EgeI	GGCGCC	1 cut(s)	2306
EheI	GGCGCC	1 cut(s)	2306
ErhI	CCWWGG	3 cut(s)	294, 1290, 2470
Esp3I	CGTCTC	1 cut(s)	938
FalI	AAGNNNNNCTT	2 cut(s)	1250, 1282
FaqI	GGGAC	4 cut(s)	95, 208, 488, 2230
FauI	CCCGC	1 cut(s)	966
FauNDI	CATATG	1 cut(s)	208
FbaI	TGATCA	1 cut(s)	2364
FblI	GTMKAC	2 cut(s)	236, 1597
FokI	GGATG	3 cut(s)	1115, 1846, 2127
FspAI	RTGCGCAY	1 cut(s)	831
FspBI	CTAG	9 cut(s)	461, 755, 951, 1035, 1416, 2120, 2199, 2318, 2457
FspI	TGCGCA	1 cut(s)	831
GlaI	GCGC	2 cut(s)	831, 2306
GsuI	CTGGAG	4 cut(s)	344, 1196, 1358, 2064
HaeII	RGCGCY	1 cut(s)	2308
HaeIII	GGCC	2 cut(s)	213, 1635
HhaI	GCGC	2 cut(s)	832, 2307
Hin1I	GRCGYC	1 cut(s)	2305
Hin6I	GCGC	2 cut(s)	830, 2305
HinP1I	GCGC	2 cut(s)	830, 2305
HincII	GTYRAC	2 cut(s)	637, 1433
HindII	GTYRAC	2 cut(s)	637, 1433
HindIII	AAGCTT	2 cut(s)	1226, 1484
HphI	GGTGA	6 cut(s)	446, 509, 1255, 2024, 2286, 2486
Hpy166II	GTNNAC	9 cut(s)	237, 583, 637, 791, 1433, 1598, 2255, 2414, 2477
Hpy8I	GTNNAC	9 cut(s)	237, 583, 637, 791, 1433, 1598, 2255, 2414, 2477
HpyCH4III	ACNGT	6 cut(s)	199, 652, 827, 2012, 2252, 2411
HpyCH4IV	ACGT	3 cut(s)	233, 585, 931
HpyF3I	CTNAG	8 cut(s)	7, 500, 549, 1391, 1571, 2090, 2332, 2480
HpySE526I	ACGT	3 cut(s)	233, 585, 931
Hsp92I	GRCGYC	1 cut(s)	2305
HspAI	GCGC	2 cut(s)	830, 2305
KasI	GGCGCC	1 cut(s)	2304
Ksp22I	TGATCA	1 cut(s)	2364
KspI	CCGCGG	1 cut(s)	1125
LguI	GCTCTTC	1 cut(s)	1227
LmnI	GCTCC	4 cut(s)	1377, 1957, 2045, 2386
Lsp1109I	GCAGC	8 cut(s)	256, 367, 1387, 1472, 1681, 1798, 2015, 2475
LweI	GCATC	8 cut(s)	134, 813, 1159, 1485, 1570, 1672, 2149, 2213
MaeI	CTAG	9 cut(s)	461, 755, 951, 1035, 1416, 2120, 2199, 2318, 2457
MaeII	ACGT	3 cut(s)	233, 585, 931
MaeIII	GTNAC	4 cut(s)	910, 1276, 1309, 1872
MfeI	CAATTG	2 cut(s)	76, 1559
MflI	RGATCY	5 cut(s)	703, 1476, 1740, 2017, 2231
MhlI	GDGCHC	2 cut(s)	793, 2257
MlsI	TGGCCA	1 cut(s)	213
MluNI	TGGCCA	1 cut(s)	213
Mly113I	GGCGCC	1 cut(s)	2305
MlyI	GAGTC	7 cut(s)	335, 560, 1432, 1438, 1634, 1645, 2204
Mox20I	TGGCCA	1 cut(s)	213
Mph1103I	ATGCAT	1 cut(s)	814
MroXI	GAANNNNTTC	1 cut(s)	610
MscI	TGGCCA	1 cut(s)	213
MseI	TTAA	9 cut(s)	51, 654, 692, 785, 1361, 1481, 1791, 2109, 2503
MslI	CAYNNNNRTG	2 cut(s)	2145, 2260
Msp20I	TGGCCA	1 cut(s)	213
MspA1I	CMGCKG	3 cut(s)	973, 1124, 1463
MspCI	CTTAAG	1 cut(s)	1360
MspR9I	CCNGG	2 cut(s)	450, 1955
MunI	CAATTG	2 cut(s)	76, 1559
Mva1269I	GAATGC	1 cut(s)	2281
MvaI	CCWGG	2 cut(s)	450, 1955
MvnI	CGCG	2 cut(s)	1124, 2418
NarI	GGCGCC	1 cut(s)	2305
NcoI	CCATGG	1 cut(s)	294
NdeI	CATATG	1 cut(s)	208
NheI	GCTAGC	1 cut(s)	2317
NlaIV	GGNNCC	7 cut(s)	476, 1288, 1921, 2047, 2218, 2306, 2377
NmuCI	GTSAC	2 cut(s)	1276, 1309
NsbI	TGCGCA	1 cut(s)	831
NsiI	ATGCAT	1 cut(s)	814
NspI	RCATGY	1 cut(s)	1343
NspV	TTCGAA	3 cut(s)	679, 1719, 2032
PagI	TCATGA	1 cut(s)	1647
PaqCI	CACCTGC	1 cut(s)	1907
PciSI	GCTCTTC	1 cut(s)	1227
PcsI	WCGNNNNNNNCGW	2 cut(s)	2190, 2401
PctI	GAATGC	1 cut(s)	2281
PdmI	GAANNNNTTC	1 cut(s)	610
PfeI	GAWTC	8 cut(s)	332, 611, 848, 875, 1214, 1249, 1679, 1969
PleI	GAGTC	7 cut(s)	334, 559, 1432, 1437, 1634, 1645, 2203
PluTI	GGCGCC	1 cut(s)	2308
PpsI	GAGTC	7 cut(s)	334, 559, 1432, 1437, 1634, 1645, 2203
Ppu21I	YACGTR	1 cut(s)	586
PsiI	TTATAA	1 cut(s)	189
Psp6I	CCWGG	2 cut(s)	448, 1953
PspGI	CCWGG	2 cut(s)	448, 1953
PspN4I	GGNNCC	7 cut(s)	476, 1288, 1921, 2047, 2218, 2306, 2377
PspPI	GGNCC	5 cut(s)	286, 475, 920, 1286, 2217
PstI	CTGCAG	2 cut(s)	357, 1671
PstNI	CAGNNNCTG	2 cut(s)	14, 1960
PsuI	RGATCY	5 cut(s)	703, 1476, 1740, 2017, 2231
PvuII	CAGCTG	1 cut(s)	1463
RsaI	GTAC	4 cut(s)	223, 582, 955, 2271
RsaNI	GTAC	4 cut(s)	222, 581, 954, 2270
RseI	CAYNNNNRTG	2 cut(s)	2145, 2260
SacII	CCGCGG	1 cut(s)	1125
SapI	GCTCTTC	1 cut(s)	1227
SaqAI	TTAA	9 cut(s)	51, 654, 692, 785, 1361, 1481, 1791, 2109, 2503
Sau96I	GGNCC	5 cut(s)	286, 475, 920, 1286, 2217
ScaI	AGTACT	1 cut(s)	955
SchI	GAGTC	7 cut(s)	335, 560, 1432, 1438, 1634, 1645, 2204
ScrFI	CCNGG	2 cut(s)	450, 1955
SduI	GDGCHC	2 cut(s)	793, 2257
SfaNI	GCATC	8 cut(s)	134, 813, 1159, 1485, 1570, 1672, 2149, 2213
SfcI	CTRYAG	3 cut(s)	353, 411, 1667
SfoI	GGCGCC	1 cut(s)	2306
Sfr303I	CCGCGG	1 cut(s)	1125
SfuI	TTCGAA	3 cut(s)	679, 1719, 2032
SgrBI	CCGCGG	1 cut(s)	1125
SinI	GGWCC	5 cut(s)	286, 475, 920, 1286, 2217
SmiMI	CAYNNNNRTG	2 cut(s)	2145, 2260
SmlI	CTYRAG	3 cut(s)	1360, 1653, 1673
SmoI	CTYRAG	3 cut(s)	1360, 1653, 1673
SpeI	ACTAGT	1 cut(s)	1415
SsiI	CCGC	8 cut(s)	520, 973, 1122, 1124, 1913, 2064, 2485, 2491
SspDI	GGCGCC	1 cut(s)	2304
SspMI	CTAG	9 cut(s)	461, 755, 951, 1035, 1416, 2120, 2199, 2318, 2457
StyD4I	CCNGG	2 cut(s)	448, 1953
StyI	CCWWGG	3 cut(s)	294, 1290, 2470
TaaI	ACNGT	6 cut(s)	199, 652, 827, 2012, 2252, 2411
TaiI	ACGT	3 cut(s)	236, 588, 934
TaqII	GACCGA	1 cut(s)	908
TatI	WGTACW	2 cut(s)	953, 2269
TauI	GCSGC	3 cut(s)	1124, 1916, 2488
TfiI	GAWTC	8 cut(s)	332, 611, 848, 875, 1214, 1249, 1679, 1969
Tru1I	TTAA	9 cut(s)	51, 654, 692, 785, 1361, 1481, 1791, 2109, 2503
Tru9I	TTAA	9 cut(s)	51, 654, 692, 785, 1361, 1481, 1791, 2109, 2503
TscAI	CASTG	7 cut(s)	553, 655, 798, 832, 909, 1179, 2374
TseFI	GTSAC	2 cut(s)	1276, 1309
TseI	GCWGC	8 cut(s)	269, 355, 1400, 1460, 1669, 1811, 2003, 2488
Tsp45I	GTSAC	2 cut(s)	1276, 1309
TspGWI	ACGGA	1 cut(s)	278
TspRI	CASTG	7 cut(s)	553, 655, 798, 832, 909, 1179, 2374
Vha464I	CTTAAG	1 cut(s)	1360
VneI	GTGCAC	2 cut(s)	789, 2253
VpaK11BI	GGWCC	5 cut(s)	286, 475, 920, 1286, 2217
XapI	RAATTY	6 cut(s)	1013, 1468, 1713, 1779, 1930, 2179
XbaI	TCTAGA	1 cut(s)	1034
XceI	RCATGY	1 cut(s)	1343
XmiI	GTMKAC	2 cut(s)	236, 1597
XmnI	GAANNNNTTC	1 cut(s)	610
XspI	CTAG	9 cut(s)	461, 755, 951, 1035, 1416, 2120, 2199, 2318, 2457
ZrmI	AGTACT	1 cut(s)	955
Zsp2I	ATGCAT	1 cut(s)	814

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.