Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0009832

Physical Location & Seq

Genomic Coordinates Forward (+)

17597250 .. 17606657

Gene Structure 9408 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG190000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2763 bp

ATGGCCGCTTCAGGCGGGTATAATTACCGAGATGCTGCTACTCAGAGAAGCTCTTTCAAGGTGGATAGGCCTCTTTCTGTCAATTCCAACCCCAAGTCTGCTGTAAAGTCCAAGCCTTTGCTTCCTCCTCGCCGGAACAGCACTGGCTCTATTGGTGCTGCTGCTGCTGCTGCTGCTGGAACTGCCTCTAAGGATAATACTGGAGTTCCTGGAAGAGTCCGAGTAGCTGTGAGATTGCGGCCACGTAACTCTGATGAAATGATCTCAGATGCTGATTTTGCTGAAATTGTAGAATTACAGCCAGAGCTTAAAAGGTTGAAACTTCGGAGAAACAATTGGGACTTGGATACTTATGAGTTCGATGAAGTTCTCACAGAGTTTGCATCACAAAAGCGTGTTTATGAAGTAGTGGCAAAGCCTGTTGTGGAGAGTGTTCTGGAAGGTTATAATGGGACAGTCATGGCATATGGCCAGACTGGTACAGGAAAGACGTATACACTTGGACGACTTGGAGAGGAGGATACTGCTGCTCGTGGAATAATGGTCCGTGCCATGGAGGATATTTTAGCAGATGTATCTCTGGAGTCTGATTCTTTGTCAGTCTCGTATCTGCAGCTTTACATGGAAACCATACATGACCTACTCGATCCTGCAAATGATAGCATTTCTATAGTGGAAGACCCCAAAACTGGTGATGTCTCACTACCAGGGGCAAGCCTAGTTGAAATCAGGGACCACAAGAGTTTCGTGGAACTACTAAGATTAGGGGAAGCTCACCGCTTTGCTACCAATACAAAACTGAACACTGAGTCTTCTCGTAGCCATGCTATTCTGATGGTACACGTAAAAAAGTCCGTAAAGGGAAGAGATTCAGCTCTTTCAAGCCAAAATGTCAACAACTCCCACACTGTTAAAAGTCTGAAGCCTCCTGTTGTTCGAAAGAGCAAGTTAATTGTGGTGGATCTTGCTGGTTCAGAGCGTATCGACAAATCAGGAAGTGAAGGACATACACTAGAGGAAGCCAAATCAATCAATCTCTCGTTAAGTGCACTGGGAAAGTGCATCAATGCATTGGCAGAAAACAGTGCGCATATTCCTGTTCGAGATTCAAAACTTACAAGATTGCTTCGGGATTCATTTGGAGGCACAGCAAGAACATCACTGGTTGTTACTATCGGTCCATCTCCACGTCATCGAGGAGAGACGGCTAGTACTATTATGTTTGGACAGCGGGCTATGAAAGTGGAAAATATGTTGAAATTGAAGGAGGAATTTGACTACAAAAGTTTGTCCAGAAGGCTAGATATACAATTAGACAAACTCATTGCAGAACATGAAAGACAGCAGAAAGCATTTGAGGATGAGATTGAAAGAATAGCCGCGGAAGCACAAAATCAGATCACAGAGGTTGAAAAGAACTATGCAGATGCACTGGAGAAGGAAAGATTGAAATATCAGAAAGACTATATGGAATCAATAAAAAAGCTTGAAGAGCAGTTGGTGATGAATCAGCCAAAGCATGACTTTGAAAAAGTCACAAATGGACCCAAGGACGATAAATCTAATGTGACATCGAGCAAAGAGATTTGCAGGTTGCATGTTGAGGAAATTAATGACTTAAGAAAGTTGCTCCAGCGAGAGACAAGTCTTAGGAAGGCTGCTGAAGAGGAAACTAGTAATCTGAAGAGTCAACTGACTCAATGGAAAAGGTCAGAGGCAGCTGGAAATTCAGAGATCTTAAAGCTTCGTAAGATGCTGGAAGATGAGGCACATCAGAAGGAGAAACTTGAAGGAGAAATAGCAACACTTCACAGTCAATTGTTGCAACTGAGCTTTGATGCTGATGAGACAAGTAGACAACTTGATAGGGGTGGGCTTGGAAAAGTTGGTGGCCTTGACTCCCTCATGACTCAAGTTAGGCATCTACAGCTCAAGGAATCAGGAAATGAGGACAAAGCCTCAATAGCAAAAATTTTCGAACAAGTGGGATTGCAAAAGATCTTGTCATTACTTGAAGCTGAAGACAATGATGTGCGAATTCATGCCGTTAAAGTCGTAGCAAATCTTGCTGCTGAAGAAGCAAATCAGGAGAAAATTGTAGAAGCTGGTGGTCTCACATCCTTGTTGATGTTACTCAAAACCTCTGACGATGAAACCATACATAGAGTTGCGGCAGGTGCCATCGCAAATTTAGCAATGAACGAAACCAACCAGGAGCTGATAATGAGTCAAGGGGGAATTAGTTTGTTATCTATGACAGCAGCCAATGGTGAAGATCCACAAACCCTTCGAATGGTTGCTGGAGCCATTGCTAATCTTTGCGGAAATGATAAATTACAGAGCAAGCTAAGAGCTGAAGGTGGAATTAAGGCATTGCTAGGAATGGTCAGATGTGGGCATCCAGATGTTCTTGCACAAGTTGCTCGTGGGATTGCAAATTTCGCAAAATGCGAGTCTAGGGCATCTACACAAGGGACCAAAAATGGAAGATCTCTTTTGATTGAGGACGGTGCACTTTCATGGATTGTACAAAATGCTAATAATGAAGCCTCACCAATCAGGCGCCACATTGAGCTAGCACTATGCCACTTAGCACAACATGAAACAAATGCAAAAGACATGATCAGTGGTGGTGCCTTGTGGGAGCTTGTTCGCATTTCCCGAGACTGTTCACGCGAAGACATAAGAACTCTTGCATATCGAACACTAACTTCTAGCCCCACCTTCCAAGGTGAATTGAGGCGGCTGCGGATAGATAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04144 ko04728 map04144 map04728

Pfam Domains

Protein Families

Arm Kinesin

Protein Analysis

920

Amino Acids

101.43

Weight (kDa)

6.45

Isoelectric Point (pI)

36.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	71 - 215	6.7e-15	Microtubule binding
Kinesin	PF00225	78 - 415	1e-93	Kinesin motor domain
ARM_ARMC5	PF24768	685 - 889	3.2e-15	ARMC5
Arm	PF00514	695 - 732	1.2e-06	Armadillo/beta-catenin-like repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009832)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12430 AT1G12430
fragaria_vesca	FvH4_5g00930 FvH4_5g00930 FvH4_5g00930
malus_domestica	MD04G1077000.v1.1 MD06G1067900.v1.1
prunus_persica	Prupe.5G082300_v2.0.a1 Prupe.5G082300_v2.0.a1
pyrus_communis	pycom04g06770
rosa_chinensis	RchiOBHm_Chr7g0200461
rosa_laevigata	RLG00000003701
rosa_multiflora	Rmu_sc0000617.1_g000027 Rmu_sc0002613.1_g000001
rosa_roxburghii	Rroxscaffold_3G00255950
rosa_rugosa	Rorug07G0060400
rosa_samantha	Rh7AG185900 Rh7BG189000 Rh7CG196200 Rh7DG190000
rosa_wichuraiana	Rw7G016300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	447
AarI	CACCTGC	1 cut(s)	2165
Acc16I	TGCGCA	1 cut(s)	1089
Acc36I	ACCTGC	2 cut(s)	1581, 2165
AccB1I	GGYRCC	3 cut(s)	2177, 2562, 2633
AccI	GTMKAC	2 cut(s)	494, 1855
AccII	CGCG	2 cut(s)	1382, 2676
AclWI	GGATC	3 cut(s)	641, 969, 2270
AcoI	YGGCCR	3 cut(s)	3, 239, 469
AcsI	RAATTY	6 cut(s)	1271, 1726, 1971, 2037, 2188, 2437
AcuI	CTGAAG	6 cut(s)	941, 1683, 1703, 2040, 2094, 2376
AcyI	GRCGYC	1 cut(s)	2563
AfaI	GTAC	4 cut(s)	481, 840, 1213, 2529
AfiI	CCNNNNNNNGG	3 cut(s)	553, 689, 2293
AflII	CTTAAG	1 cut(s)	1618
AflIII	ACRYGT	1 cut(s)	841
AhlI	ACTAGT	1 cut(s)	1673
AjiI	CACGTC	1 cut(s)	1190
AjnI	CCWGG	3 cut(s)	208, 706, 2211
Alw21I	GWGCWC	2 cut(s)	1051, 2515
Alw26I	GTCTC	7 cut(s)	607, 703, 1196, 1634, 1841, 2117, 2658
Alw44I	GTGCAC	2 cut(s)	1047, 2511
AlwI	GGATC	3 cut(s)	641, 969, 2270
AlwNI	CAGNNNCTG	2 cut(s)	272, 2218
Ama87I	CYCGRG	1 cut(s)	2661
AoxI	GGCC	5 cut(s)	3, 68, 239, 469, 1891
ApaLI	GTGCAC	2 cut(s)	1047, 2511
ApoI	RAATTY	6 cut(s)	1271, 1726, 1971, 2037, 2188, 2437
ArsI	GACNNNNNNTTYG	2 cut(s)	2438, 2470
AseI	ATTAAT	1 cut(s)	1611
Asp700I	GAANNNNTTC	1 cut(s)	868
AspLEI	GCGC	2 cut(s)	1090, 2565
AspS9I	GGNCC	5 cut(s)	544, 733, 1178, 1544, 2475
AsuHPI	GGTGA	6 cut(s)	704, 767, 1513, 2282, 2544, 2744
AsuII	TTCGAA	3 cut(s)	937, 1977, 2290
AsuNHI	GCTAGC	1 cut(s)	2575
AvaI	CYCGRG	1 cut(s)	2661
AvaII	GGWCC	5 cut(s)	544, 733, 1178, 1544, 2475
BaeGI	GKGCMC	2 cut(s)	1051, 2515
BalI	TGGCCA	1 cut(s)	471
BanI	GGYRCC	3 cut(s)	2177, 2562, 2633
BauI	CACGAG	2 cut(s)	531, 2424
BbsI	GAAGAC	4 cut(s)	684, 804, 2028, 2685
Bbv12I	GWGCWC	2 cut(s)	1051, 2515
BccI	CCATC	3 cut(s)	829, 1189, 2189
BceAI	ACGGC	2 cut(s)	1221, 2030
BciT130I	CCWGG	3 cut(s)	210, 708, 2213
BciVI	GTATCC	2 cut(s)	340, 514
BclI	TGATCA	1 cut(s)	2622
BcoDI	GTCTC	7 cut(s)	607, 703, 1196, 1634, 1841, 2117, 2658
BcuI	ACTAGT	1 cut(s)	1673
BfaI	CTAG	9 cut(s)	719, 1013, 1209, 1301, 1674, 2378, 2457, 2576, 2715
BfmI	CTRYAG	3 cut(s)	611, 669, 1925
BfoI	RGCGCY	1 cut(s)	2566
BfrI	CTTAAG	1 cut(s)	1618
BfuAI	ACCTGC	2 cut(s)	1581, 2165
BfuI	GTATCC	2 cut(s)	340, 514
BglII	AGATCT	3 cut(s)	1734, 1998, 2489
BmcAI	AGTACT	1 cut(s)	1213
Bme1390I	CCNGG	3 cut(s)	210, 708, 2213
Bme18I	GGWCC	5 cut(s)	544, 733, 1178, 1544, 2475
BmeT110I	CYCGRG	1 cut(s)	2661
BmgBI	CACGTC	1 cut(s)	1190
BmgT120I	GGNCC	5 cut(s)	544, 733, 1178, 1544, 2475
BmiI	GGNNCC	7 cut(s)	734, 1546, 2179, 2305, 2476, 2564, 2635
BmrFI	CCNGG	3 cut(s)	210, 708, 2213
BmrI	ACTGGG	1 cut(s)	1061
BmtI	GCTAGC	1 cut(s)	2579
BmuI	ACTGGG	1 cut(s)	1061
BpiI	GAAGAC	4 cut(s)	684, 804, 2028, 2685
BpmI	CTGGAG	5 cut(s)	222, 602, 1454, 1616, 2322
Bpu14I	TTCGAA	3 cut(s)	937, 1977, 2290
BpuEI	CTTGAG	2 cut(s)	1896, 1916
BsaAI	YACGTR	2 cut(s)	245, 844
BsaHI	GRCGYC	1 cut(s)	2563
BsaI	GGTCTC	1 cut(s)	2117
BsaJI	CCNNGG	5 cut(s)	552, 707, 1380, 1548, 2728
Bsc4I	CCNNNNNNNGG	3 cut(s)	553, 689, 2293
Bse1I	ACTGG	7 cut(s)	148, 205, 481, 694, 1056, 1167, 1437
Bse3DI	GCAATG	4 cut(s)	1323, 2202, 2307, 2372
BseBI	CCWGG	3 cut(s)	210, 708, 2213
BseDI	CCNNGG	5 cut(s)	552, 707, 1380, 1548, 2728
BseGI	GGATG	3 cut(s)	1366, 2117, 2398
BseLI	CCNNNNNNNGG	3 cut(s)	553, 689, 2293
BseMI	GCAATG	4 cut(s)	1323, 2202, 2307, 2372
BseMII	CTCAG	4 cut(s)	56, 279, 798, 1820
BseNI	ACTGG	7 cut(s)	148, 205, 481, 694, 1056, 1167, 1437
BseRI	GAGGAG	3 cut(s)	117, 530, 1212
BseSI	GKGCMC	2 cut(s)	1051, 2515
Bsh1236I	CGCG	2 cut(s)	1382, 2676
BshFI	GGCC	5 cut(s)	5, 70, 241, 471, 1893
BshNI	GGYRCC	3 cut(s)	2177, 2562, 2633
BsiHKAI	GWGCWC	2 cut(s)	1051, 2515
BsiHKCI	CYCGRG	1 cut(s)	2661
BsiSI	CCGG	1 cut(s)	133
BslFI	GGGAC	4 cut(s)	353, 466, 746, 2488
BslI	CCNNNNNNNGG	3 cut(s)	553, 689, 2293
BsmAI	GTCTC	7 cut(s)	607, 703, 1196, 1634, 1841, 2117, 2658
BsmBI	CGTCTC	1 cut(s)	1196
BsmFI	GGGAC	4 cut(s)	353, 466, 746, 2488
BsnI	GGCC	5 cut(s)	5, 70, 241, 471, 1893
Bso31I	GGTCTC	1 cut(s)	2117
BsoBI	CYCGRG	1 cut(s)	2661
Bsp119I	TTCGAA	3 cut(s)	937, 1977, 2290
Bsp1286I	GDGCHC	2 cut(s)	1051, 2515
Bsp1407I	TGTACA	1 cut(s)	2527
Bsp143I	GATC	9 cut(s)	261, 646, 961, 1398, 1734, 1998, 2275, 2489, 2622
Bsp19I	CCATGG	1 cut(s)	552
BspANI	GGCC	5 cut(s)	5, 70, 241, 471, 1893
BspCNI	CTCAG	4 cut(s)	55, 278, 799, 1821
BspFNI	CGCG	2 cut(s)	1382, 2676
BspHI	TCATGA	1 cut(s)	1905
BspLI	GGNNCC	7 cut(s)	734, 1546, 2179, 2305, 2476, 2564, 2635
BspMAI	CTGCAG	1 cut(s)	615
BspMI	ACCTGC	2 cut(s)	1581, 2165
BspOI	GCTAGC	1 cut(s)	2579
BspPI	GGATC	3 cut(s)	641, 969, 2270
BspQI	GCTCTTC	1 cut(s)	1485
BspT104I	TTCGAA	3 cut(s)	937, 1977, 2290
BspT107I	GGYRCC	3 cut(s)	2177, 2562, 2633
BspTI	CTTAAG	1 cut(s)	1618
BspTNI	GGTCTC	1 cut(s)	2117
BsrDI	GCAATG	4 cut(s)	1323, 2202, 2307, 2372
BsrGI	TGTACA	1 cut(s)	2527
BsrI	ACTGG	7 cut(s)	148, 205, 481, 694, 1056, 1167, 1437
BssECI	CCNNGG	5 cut(s)	552, 707, 1380, 1548, 2728
BssMI	GATC	9 cut(s)	261, 646, 961, 1398, 1734, 1998, 2275, 2489, 2622
BssNAI	GTATAC	1 cut(s)	495
BssNI	GRCGYC	1 cut(s)	2563
BssSI	CACGAG	2 cut(s)	531, 2424
BssT1I	CCWWGG	3 cut(s)	552, 1548, 2728
Bst1107I	GTATAC	1 cut(s)	495
Bst2BI	CACGAG	2 cut(s)	531, 2424
Bst2UI	CCWGG	3 cut(s)	210, 708, 2213
Bst4CI	ACNGT	6 cut(s)	457, 910, 1085, 1814, 2510, 2669
Bst6I	CTCTTC	5 cut(s)	208, 859, 1485, 1659, 1679
BstACI	GRCGYC	1 cut(s)	2563
BstAFI	CTTAAG	1 cut(s)	1618
BstAPI	GCANNNNNTGC	2 cut(s)	2066, 2420
BstAUI	TGTACA	1 cut(s)	2527
BstBAI	YACGTR	2 cut(s)	245, 844
BstBI	TTCGAA	3 cut(s)	937, 1977, 2290
BstC8I	GCNNGC	4 cut(s)	715, 1233, 2345, 2577
BstDEI	CTNAG	9 cut(s)	42, 189, 265, 758, 807, 1649, 1829, 2348, 2590
BstDSI	CCRYGG	2 cut(s)	552, 1380
BstF5I	GGATG	3 cut(s)	1366, 2117, 2398
BstFNI	CGCG	2 cut(s)	1382, 2676
BstH2I	RGCGCY	1 cut(s)	2566
BstHHI	GCGC	2 cut(s)	1090, 2565
BstKTI	GATC	9 cut(s)	264, 649, 964, 1401, 1737, 2001, 2278, 2492, 2625
BstMAI	GTCTC	7 cut(s)	607, 703, 1196, 1634, 1841, 2117, 2658
BstMBI	GATC	9 cut(s)	261, 646, 961, 1398, 1734, 1998, 2275, 2489, 2622
BstNI	CCWGG	3 cut(s)	210, 708, 2213
BstNSI	RCATGY	1 cut(s)	1601
BstSCI	CCNGG	3 cut(s)	208, 706, 2211
BstSFI	CTRYAG	3 cut(s)	611, 669, 1925
BstSLI	GKGCMC	2 cut(s)	1051, 2515
BstUI	CGCG	2 cut(s)	1382, 2676
BstV2I	GAAGAC	4 cut(s)	684, 804, 2028, 2685
BstX2I	RGATCY	5 cut(s)	961, 1734, 1998, 2275, 2489
BstYI	RGATCY	5 cut(s)	961, 1734, 1998, 2275, 2489
BstZ17I	GTATAC	1 cut(s)	495
BsuI	GTATCC	2 cut(s)	340, 514
BsuRI	GGCC	5 cut(s)	5, 70, 241, 471, 1893
BtgI	CCRYGG	2 cut(s)	552, 1380
BtgZI	GCGATG	1 cut(s)	2167
BtrI	CACGTC	1 cut(s)	1190
BtsCI	GGATG	3 cut(s)	1366, 2117, 2398
BtsIMutI	CAGTG	8 cut(s)	141, 804, 906, 1049, 1090, 1160, 1430, 2632
BveI	ACCTGC	2 cut(s)	1581, 2165
Cac8I	GCNNGC	4 cut(s)	715, 1233, 2345, 2577
CaiI	CAGNNNCTG	2 cut(s)	272, 2218
CciI	TCATGA	1 cut(s)	1905
CfoI	GCGC	2 cut(s)	1090, 2565
Cfr13I	GGNCC	5 cut(s)	544, 733, 1178, 1544, 2475
Cfr42I	CCGCGG	1 cut(s)	1383
Csp6I	GTAC	4 cut(s)	480, 839, 1212, 2528
CviQI	GTAC	4 cut(s)	480, 839, 1212, 2528
DdeI	CTNAG	9 cut(s)	42, 189, 265, 758, 807, 1649, 1829, 2348, 2590
DinI	GGCGCC	1 cut(s)	2564
DpnI	GATC	9 cut(s)	263, 648, 963, 1400, 1736, 2000, 2277, 2491, 2624
DpnII	GATC	9 cut(s)	261, 646, 961, 1398, 1734, 1998, 2275, 2489, 2622
EaeI	YGGCCR	3 cut(s)	3, 239, 469
Eam1104I	CTCTTC	5 cut(s)	208, 859, 1485, 1659, 1679
EarI	CTCTTC	5 cut(s)	208, 859, 1485, 1659, 1679
Eco130I	CCWWGG	3 cut(s)	552, 1548, 2728
Eco147I	AGGCCT	1 cut(s)	70
Eco31I	GGTCTC	1 cut(s)	2117
Eco47I	GGWCC	5 cut(s)	544, 733, 1178, 1544, 2475
Eco57I	CTGAAG	6 cut(s)	941, 1683, 1703, 2040, 2094, 2376
Eco88I	CYCGRG	1 cut(s)	2661
EcoRI	GAATTC	1 cut(s)	2037
EcoRII	CCWGG	3 cut(s)	208, 706, 2211
EcoT14I	CCWWGG	3 cut(s)	552, 1548, 2728
EcoT22I	ATGCAT	1 cut(s)	1072
EgeI	GGCGCC	1 cut(s)	2564
EheI	GGCGCC	1 cut(s)	2564
ErhI	CCWWGG	3 cut(s)	552, 1548, 2728
Esp3I	CGTCTC	1 cut(s)	1196
FalI	AAGNNNNNCTT	2 cut(s)	1508, 1540
FaqI	GGGAC	4 cut(s)	353, 466, 746, 2488
FauI	CCCGC	2 cut(s)	8, 1224
FauNDI	CATATG	1 cut(s)	466
FbaI	TGATCA	1 cut(s)	2622
FblI	GTMKAC	2 cut(s)	494, 1855
FokI	GGATG	3 cut(s)	1373, 2104, 2385
FspAI	RTGCGCAY	1 cut(s)	1089
FspBI	CTAG	9 cut(s)	719, 1013, 1209, 1301, 1674, 2378, 2457, 2576, 2715
FspI	TGCGCA	1 cut(s)	1089
GlaI	GCGC	2 cut(s)	1089, 2564
GsuI	CTGGAG	5 cut(s)	222, 602, 1454, 1616, 2322
HaeII	RGCGCY	1 cut(s)	2566
HaeIII	GGCC	5 cut(s)	5, 70, 241, 471, 1893
HapII	CCGG	1 cut(s)	133
HhaI	GCGC	2 cut(s)	1090, 2565
Hin1I	GRCGYC	1 cut(s)	2563
Hin6I	GCGC	2 cut(s)	1088, 2563
HinP1I	GCGC	2 cut(s)	1088, 2563
HincII	GTYRAC	2 cut(s)	895, 1691
HindII	GTYRAC	2 cut(s)	895, 1691
HindIII	AAGCTT	2 cut(s)	1484, 1742
HpaII	CCGG	1 cut(s)	133
HphI	GGTGA	6 cut(s)	704, 767, 1513, 2282, 2544, 2744
Hpy166II	GTNNAC	8 cut(s)	495, 841, 895, 1049, 1691, 1856, 2513, 2672
Hpy8I	GTNNAC	8 cut(s)	495, 841, 895, 1049, 1691, 1856, 2513, 2672
HpyCH4III	ACNGT	6 cut(s)	457, 910, 1085, 1814, 2510, 2669
HpyCH4IV	ACGT	4 cut(s)	244, 491, 843, 1189
HpyF3I	CTNAG	9 cut(s)	42, 189, 265, 758, 807, 1649, 1829, 2348, 2590
HpySE526I	ACGT	4 cut(s)	244, 491, 843, 1189
Hsp92I	GRCGYC	1 cut(s)	2563
HspAI	GCGC	2 cut(s)	1088, 2563
KasI	GGCGCC	1 cut(s)	2562
Ksp22I	TGATCA	1 cut(s)	2622
KspI	CCGCGG	1 cut(s)	1383
Kzo9I	GATC	9 cut(s)	261, 646, 961, 1398, 1734, 1998, 2275, 2489, 2622
LguI	GCTCTTC	1 cut(s)	1485
LmnI	GCTCC	4 cut(s)	1635, 2215, 2303, 2644
MaeI	CTAG	9 cut(s)	719, 1013, 1209, 1301, 1674, 2378, 2457, 2576, 2715
MaeII	ACGT	4 cut(s)	244, 491, 843, 1189
MaeIII	GTNAC	5 cut(s)	245, 1168, 1534, 1567, 2130
MalI	GATC	9 cut(s)	263, 648, 963, 1400, 1736, 2000, 2277, 2491, 2624
MboI	GATC	9 cut(s)	261, 646, 961, 1398, 1734, 1998, 2275, 2489, 2622
MfeI	CAATTG	2 cut(s)	334, 1817
MflI	RGATCY	5 cut(s)	961, 1734, 1998, 2275, 2489
MhlI	GDGCHC	2 cut(s)	1051, 2515
MlsI	TGGCCA	1 cut(s)	471
MluNI	TGGCCA	1 cut(s)	471
Mly113I	GGCGCC	1 cut(s)	2563
MlyI	GAGTC	9 cut(s)	225, 593, 818, 1690, 1696, 1892, 1903, 2236, 2462
MmeI	TCCRAC	1 cut(s)	111
Mox20I	TGGCCA	1 cut(s)	471
Mph1103I	ATGCAT	1 cut(s)	1072
MroXI	GAANNNNTTC	1 cut(s)	868
MscI	TGGCCA	1 cut(s)	471
MslI	CAYNNNNRTG	2 cut(s)	2403, 2518
Msp20I	TGGCCA	1 cut(s)	471
MspA1I	CMGCKG	3 cut(s)	1231, 1382, 1721
MspCI	CTTAAG	1 cut(s)	1618
MspI	CCGG	1 cut(s)	133
MspR9I	CCNGG	3 cut(s)	210, 708, 2213
MunI	CAATTG	2 cut(s)	334, 1817
MvaI	CCWGG	3 cut(s)	210, 708, 2213
MvnI	CGCG	2 cut(s)	1382, 2676
NarI	GGCGCC	1 cut(s)	2563
NcoI	CCATGG	1 cut(s)	552
NdeI	CATATG	1 cut(s)	466
NdeII	GATC	9 cut(s)	261, 646, 961, 1398, 1734, 1998, 2275, 2489, 2622
NheI	GCTAGC	1 cut(s)	2575
NlaIV	GGNNCC	7 cut(s)	734, 1546, 2179, 2305, 2476, 2564, 2635
NmuCI	GTSAC	2 cut(s)	1534, 1567
NsbI	TGCGCA	1 cut(s)	1089
NsiI	ATGCAT	1 cut(s)	1072
NspI	RCATGY	1 cut(s)	1601
NspV	TTCGAA	3 cut(s)	937, 1977, 2290
PagI	TCATGA	1 cut(s)	1905
PaqCI	CACCTGC	1 cut(s)	2165
PceI	AGGCCT	1 cut(s)	70
PciSI	GCTCTTC	1 cut(s)	1485
PcsI	WCGNNNNNNNCGW	2 cut(s)	2448, 2659
PdmI	GAANNNNTTC	1 cut(s)	868
PfeI	GAWTC	7 cut(s)	590, 869, 1106, 1133, 1472, 1507, 1937
PfoI	TCCNGGA	1 cut(s)	208
PleI	GAGTC	9 cut(s)	224, 592, 817, 1690, 1695, 1892, 1903, 2235, 2461
PluTI	GGCGCC	1 cut(s)	2566
PpsI	GAGTC	9 cut(s)	224, 592, 817, 1690, 1695, 1892, 1903, 2235, 2461
Ppu21I	YACGTR	2 cut(s)	245, 844
PshBI	ATTAAT	1 cut(s)	1611
PsiI	TTATAA	1 cut(s)	447
Psp6I	CCWGG	3 cut(s)	208, 706, 2211
PspGI	CCWGG	3 cut(s)	208, 706, 2211
PspN4I	GGNNCC	7 cut(s)	734, 1546, 2179, 2305, 2476, 2564, 2635
PspPI	GGNCC	5 cut(s)	544, 733, 1178, 1544, 2475
PstI	CTGCAG	1 cut(s)	615
PstNI	CAGNNNCTG	2 cut(s)	272, 2218
PsuI	RGATCY	5 cut(s)	961, 1734, 1998, 2275, 2489
PvuII	CAGCTG	1 cut(s)	1721
RsaI	GTAC	4 cut(s)	481, 840, 1213, 2529
RsaNI	GTAC	4 cut(s)	480, 839, 1212, 2528
RseI	CAYNNNNRTG	2 cut(s)	2403, 2518
SacII	CCGCGG	1 cut(s)	1383
SapI	GCTCTTC	1 cut(s)	1485
Sau3AI	GATC	9 cut(s)	261, 646, 961, 1398, 1734, 1998, 2275, 2489, 2622
Sau96I	GGNCC	5 cut(s)	544, 733, 1178, 1544, 2475
ScaI	AGTACT	1 cut(s)	1213
SchI	GAGTC	9 cut(s)	225, 593, 818, 1690, 1696, 1892, 1903, 2236, 2462
ScrFI	CCNGG	3 cut(s)	210, 708, 2213
SduI	GDGCHC	2 cut(s)	1051, 2515
SfcI	CTRYAG	3 cut(s)	611, 669, 1925
SfoI	GGCGCC	1 cut(s)	2564
Sfr303I	CCGCGG	1 cut(s)	1383
SfuI	TTCGAA	3 cut(s)	937, 1977, 2290
SgrBI	CCGCGG	1 cut(s)	1383
SinI	GGWCC	5 cut(s)	544, 733, 1178, 1544, 2475
SmiMI	CAYNNNNRTG	2 cut(s)	2403, 2518
SmlI	CTYRAG	3 cut(s)	1618, 1911, 1931
SmoI	CTYRAG	3 cut(s)	1618, 1911, 1931
SpeI	ACTAGT	1 cut(s)	1673
SseBI	AGGCCT	1 cut(s)	70
SspDI	GGCGCC	1 cut(s)	2562
SspMI	CTAG	9 cut(s)	719, 1013, 1209, 1301, 1674, 2378, 2457, 2576, 2715
StuI	AGGCCT	1 cut(s)	70
StyD4I	CCNGG	3 cut(s)	208, 706, 2211
StyI	CCWWGG	3 cut(s)	552, 1548, 2728
TaaI	ACNGT	6 cut(s)	457, 910, 1085, 1814, 2510, 2669
TaiI	ACGT	4 cut(s)	247, 494, 846, 1192
TaqII	GACCGA	1 cut(s)	1166
TatI	WGTACW	2 cut(s)	1211, 2527
TauI	GCSGC	5 cut(s)	8, 241, 1382, 2174, 2746
TfiI	GAWTC	7 cut(s)	590, 869, 1106, 1133, 1472, 1507, 1937
TscAI	CASTG	8 cut(s)	148, 811, 913, 1056, 1090, 1167, 1437, 2632
TseFI	GTSAC	2 cut(s)	1534, 1567
Tsp45I	GTSAC	2 cut(s)	1534, 1567
TspGWI	ACGGA	2 cut(s)	536, 844
TspRI	CASTG	8 cut(s)	148, 811, 913, 1056, 1090, 1167, 1437, 2632
Vha464I	CTTAAG	1 cut(s)	1618
VneI	GTGCAC	2 cut(s)	1047, 2511
VpaK11BI	GGWCC	5 cut(s)	544, 733, 1178, 1544, 2475
VspI	ATTAAT	1 cut(s)	1611
XapI	RAATTY	6 cut(s)	1271, 1726, 1971, 2037, 2188, 2437
XceI	RCATGY	1 cut(s)	1601
XmiI	GTMKAC	2 cut(s)	494, 1855
XmnI	GAANNNNTTC	1 cut(s)	868
XspI	CTAG	9 cut(s)	719, 1013, 1209, 1301, 1674, 2378, 2457, 2576, 2715
ZrmI	AGTACT	1 cut(s)	1213
Zsp2I	ATGCAT	1 cut(s)	1072

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.