Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0009832

Physical Location & Seq

Genomic Coordinates Forward (+)

16625877 .. 16636170

Gene Structure 10294 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G016300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2760 bp

ATGGCCGCTTCAGGCGGGTATAATTACCGAGATGCCACTACTCAGAGAAGCTCTTTCAAGGTGGATAGGCCTCTTTCTGTCAATTCCAACCCCAAGTCTGCTGTAAAGTCCAAGCCTTTGCTTCCTCCTCGCCGGAACAGCACTGGCTCTATTGGTGCTGCTGCTGCTGCTGCTGGAACTGCCTCTAAGGATAATACTGGAGTTCCTGGAAGAGTCCGAGTAGCTGTGAGATTGCGGCCACGTAACTCTGATGAAATGATCTCAGATGCTGATTTTGCTGAAATTGTAGAATTACAGCCAGAGCTTAAAAGGTTGAAACTTCGGAGAAACAATTGGGACTTGGATACTTATGAGTTCGATGAAGTTCTCACAGAGTTTGCATCACAAAAGCGTGTTTATGAAGTAGTGGCAAAGCCTGTTGTGGAGAGTGTTCTGGAAGGTTATAATGGGACAGTCATGGCATATGGCCAGACTGGTACAGGAAAGACGTATACACTTGGACGACTTGGAGAGGAGGATACTGCTGCTCGTGGAATAATGGTCCGTGCCATGGAGGATATTTTAGCAGATGTATCTCTGGAGTCTGATTCTTTGTCAGTCTCGTATCTGCAGCTTTACATGGAAACCATACATGACCTACTCGATCCTGCAAATGATAGCATTTCTATAGTGGAAGACCCCAAAACTGGTGATGTCTCACTACCAGGGGCAAGCCTAGTTGAAATCAGGGACCACAAGAGTTTCGTGGAACTACTAAGATTAGGGGAAGCTCACCGCTTTGCTACCAATACAAAACTGAACACTGAGTCTTCTCGTAGCCATGCTATTCTGATGGTACACGTAAAAAAGTCCGTAAAGGGAAGAGATTCAGCTCTTTCAAGCCAAAATGTCAACAACTCCCACACTGTTAAAAGTCTGAAGCCTCCTGTTGTTCGAAAGAGCAAGTTAATTGTGGTGGATCTTGCTGGTTCAGAGCGTATCGACAAATCAGGAAGTGAAGGACATACACTAGAGGAAGCCAAATCAATCAATCTCTCGTTAAGTGCACTGGGAAAGTGCATCAATGCATTGGCAGAAAACAGTGCGCATATTCCTGTTCGAGATTCAAAACTTACAAGATTGCTTCGGGATTCATTTGGAGGCACAGCAAGAACATCACTGGTTGTTACTATCGGTCCATCTCCACGTCATCGAGGAGAGACGGCTAGTACTATTATGTTTGGACAGCGGGCTATGAAAGTGGAAAATATGTTGAAATTGAAGGAGGAATTTGACTACAAAAGTTTGTCCAGAAGGCTAGATATACAATTAGACAAACTCATTGCAGAACATGAAAGACAGCAGAAAGCATTTGAGGATGAGATTGAAAGAATAGCCGCGGAAGCACAAAATCAGATCACAGAGGTTGAAAAGAACTATGCAGATGCACTGGAGAAGGAAAGATTGAAATATCAGAAAGACTATATGGAATCAATAAAAAAGCTTGAAGAGCAGTTGGTGATGAATCAGCCAAAGCATGACTTTGAAAAAGTCACAAATGGACCCAAGGACGATAAATCTAATGTGACATCGAGCAAAGAGATTTGCAGGTTGCATGTTGAGGAAATTGATGACTTAAGAAAGTTGCTCCAGCGAGAGACAAGTCTTAGGAAGGCTGCTGAAGAGGAAACTAGTAATCTGAAGAGTCAACTGACTCAATGGAAAAGGTCAGAGGCAGCTGGAAATTCAGAGATCTTAAAGCTTCGTAAGATGCTGGAAGATGAGGCACATCAGAAGGAGAAACTTGAAGGAGAAATAGCAACACTTCACAGTCAATTGTTGCAACTGAGCTTTGATGCTGATGAGACAAGTAGACAACTTGATAGGGGTGGGCTTGGAAAAGTTGGTGGCCTTGACTCCCTCATGACTCAAGTTAGGCATCTACAGCTCAAGGAATCAGGAAATGAGGACAAAGCCTCAATAGCAAAAATTTTCGAACAAGTGGGATTGCAAAAGATCTTGTCATTACTTGAAGCTGAAGACAATGATGTGCGAATTCATGCCGTTAAAGTCGTAGCAAATCTTGCTGCTGAAGAAGCAAATCAGGAGAAAATTGTAGAAGCTGGTGGTCTCACATCCTTGTTGATGTTACTCAAAACCTCTGACGATGAAACCATACATAGAGTTGCGGCAGGTGCCATCGCAAATTTAGCAATGAACGAAACCAACCAGGAGCTGATAATGAGTCAAGGGGGAATTAGTTTGTTATCTATGACAGCAGCCAATGGTGAAGATCCACAAACCCTTCGAATGGTTGCTGGAGCCATTGCTAATCTTTGCGGAAACGATAAATTACAGAGCAAGCTAAGGGCTGAAGGTGGAATTAAGGCATTGCTAGGAATGGTCAGATGTGGGCATCCAGATGTTCTTGCACAAGTTGCTCGTGGGATTGCAAATTTCGCAAAATGCGAGTCTAGGGCATCTACACAAGGGACCAAAAATGGAAGATCTCTTTTGATTGAGGACGGTGCACTTTCATGGATTGTACAAAATGCTAATAATGAAGCCTCACCAATCAGGCGCCACATTGAGCTAGCACTATGCCACTTAGCACAACATGAAACAAATGCAAAAGACATGATCAGTGGTGGTGCCTTGTGGGAGCTTGTTCGCATTTCCCGAGACTGTTCACGCGAAGACATAAGAACTCTTGCATATCGAACACTAACTTCTAGCCCCACCTTCCAAGGTGAATTGAGGCGGCTGCGGATAGATAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04144 ko04728 map04144 map04728

Pfam Domains

Protein Families

Arm Kinesin

Protein Analysis

919

Amino Acids

101.39

Weight (kDa)

6.37

Isoelectric Point (pI)

36.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	70 - 214	6.7e-15	Microtubule binding
Kinesin	PF00225	77 - 414	1e-93	Kinesin motor domain
ARM_ARMC5	PF24768	684 - 888	3.2e-15	ARMC5
Arm	PF00514	694 - 731	1.2e-06	Armadillo/beta-catenin-like repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009832)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12430 AT1G12430
fragaria_vesca	FvH4_5g00930 FvH4_5g00930 FvH4_5g00930
malus_domestica	MD04G1077000.v1.1 MD06G1067900.v1.1
prunus_persica	Prupe.5G082300_v2.0.a1 Prupe.5G082300_v2.0.a1
pyrus_communis	pycom04g06770
rosa_chinensis	RchiOBHm_Chr7g0200461
rosa_laevigata	RLG00000003701
rosa_multiflora	Rmu_sc0000617.1_g000027 Rmu_sc0002613.1_g000001
rosa_roxburghii	Rroxscaffold_3G00255950
rosa_rugosa	Rorug07G0060400
rosa_samantha	Rh7AG185900 Rh7BG189000 Rh7CG196200 Rh7DG190000
rosa_wichuraiana	Rw7G016300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	444
AarI	CACCTGC	1 cut(s)	2162
Acc16I	TGCGCA	1 cut(s)	1086
Acc36I	ACCTGC	2 cut(s)	1578, 2162
AccB1I	GGYRCC	3 cut(s)	2174, 2559, 2630
AccI	GTMKAC	2 cut(s)	491, 1852
AccII	CGCG	2 cut(s)	1379, 2673
AclWI	GGATC	3 cut(s)	638, 966, 2267
AcoI	YGGCCR	3 cut(s)	3, 236, 466
AcsI	RAATTY	6 cut(s)	1268, 1723, 1968, 2034, 2185, 2434
AcuI	CTGAAG	6 cut(s)	938, 1680, 1700, 2037, 2091, 2373
AcyI	GRCGYC	1 cut(s)	2560
AfaI	GTAC	4 cut(s)	478, 837, 1210, 2526
AfiI	CCNNNNNNNGG	3 cut(s)	550, 686, 2290
AflII	CTTAAG	1 cut(s)	1615
AflIII	ACRYGT	1 cut(s)	838
AhlI	ACTAGT	1 cut(s)	1670
AjiI	CACGTC	1 cut(s)	1187
AjnI	CCWGG	3 cut(s)	205, 703, 2208
Alw21I	GWGCWC	2 cut(s)	1048, 2512
Alw26I	GTCTC	7 cut(s)	604, 700, 1193, 1631, 1838, 2114, 2655
Alw44I	GTGCAC	2 cut(s)	1044, 2508
AlwI	GGATC	3 cut(s)	638, 966, 2267
AlwNI	CAGNNNCTG	2 cut(s)	269, 2215
Ama87I	CYCGRG	1 cut(s)	2658
AoxI	GGCC	5 cut(s)	3, 68, 236, 466, 1888
ApaLI	GTGCAC	2 cut(s)	1044, 2508
ApoI	RAATTY	6 cut(s)	1268, 1723, 1968, 2034, 2185, 2434
ArsI	GACNNNNNNTTYG	2 cut(s)	2435, 2467
Asp700I	GAANNNNTTC	1 cut(s)	865
AspLEI	GCGC	2 cut(s)	1087, 2562
AspS9I	GGNCC	5 cut(s)	541, 730, 1175, 1541, 2472
AsuHPI	GGTGA	6 cut(s)	701, 764, 1510, 2279, 2541, 2741
AsuII	TTCGAA	3 cut(s)	934, 1974, 2287
AsuNHI	GCTAGC	1 cut(s)	2572
AvaI	CYCGRG	1 cut(s)	2658
AvaII	GGWCC	5 cut(s)	541, 730, 1175, 1541, 2472
BaeGI	GKGCMC	2 cut(s)	1048, 2512
BalI	TGGCCA	1 cut(s)	468
BanI	GGYRCC	3 cut(s)	2174, 2559, 2630
BauI	CACGAG	2 cut(s)	528, 2421
BbsI	GAAGAC	4 cut(s)	681, 801, 2025, 2682
Bbv12I	GWGCWC	2 cut(s)	1048, 2512
BccI	CCATC	3 cut(s)	826, 1186, 2186
BceAI	ACGGC	2 cut(s)	1218, 2027
BciT130I	CCWGG	3 cut(s)	207, 705, 2210
BciVI	GTATCC	2 cut(s)	337, 511
BclI	TGATCA	1 cut(s)	2619
BcoDI	GTCTC	7 cut(s)	604, 700, 1193, 1631, 1838, 2114, 2655
BcuI	ACTAGT	1 cut(s)	1670
BfaI	CTAG	9 cut(s)	716, 1010, 1206, 1298, 1671, 2375, 2454, 2573, 2712
BfmI	CTRYAG	3 cut(s)	608, 666, 1922
BfoI	RGCGCY	1 cut(s)	2563
BfrI	CTTAAG	1 cut(s)	1615
BfuAI	ACCTGC	2 cut(s)	1578, 2162
BfuI	GTATCC	2 cut(s)	337, 511
BglII	AGATCT	3 cut(s)	1731, 1995, 2486
BmcAI	AGTACT	1 cut(s)	1210
Bme1390I	CCNGG	3 cut(s)	207, 705, 2210
Bme18I	GGWCC	5 cut(s)	541, 730, 1175, 1541, 2472
BmeT110I	CYCGRG	1 cut(s)	2658
BmgBI	CACGTC	1 cut(s)	1187
BmgT120I	GGNCC	5 cut(s)	541, 730, 1175, 1541, 2472
BmiI	GGNNCC	7 cut(s)	731, 1543, 2176, 2302, 2473, 2561, 2632
BmrFI	CCNGG	3 cut(s)	207, 705, 2210
BmrI	ACTGGG	1 cut(s)	1058
BmtI	GCTAGC	1 cut(s)	2576
BmuI	ACTGGG	1 cut(s)	1058
BpiI	GAAGAC	4 cut(s)	681, 801, 2025, 2682
BpmI	CTGGAG	5 cut(s)	219, 599, 1451, 1613, 2319
Bpu10I	CCTNAGC	1 cut(s)	2345
Bpu14I	TTCGAA	3 cut(s)	934, 1974, 2287
BpuEI	CTTGAG	2 cut(s)	1893, 1913
BsaAI	YACGTR	2 cut(s)	242, 841
BsaHI	GRCGYC	1 cut(s)	2560
BsaI	GGTCTC	1 cut(s)	2114
BsaJI	CCNNGG	5 cut(s)	549, 704, 1377, 1545, 2725
Bsc4I	CCNNNNNNNGG	3 cut(s)	550, 686, 2290
Bse1I	ACTGG	7 cut(s)	148, 202, 478, 691, 1053, 1164, 1434
Bse3DI	GCAATG	4 cut(s)	1320, 2199, 2304, 2369
BseBI	CCWGG	3 cut(s)	207, 705, 2210
BseDI	CCNNGG	5 cut(s)	549, 704, 1377, 1545, 2725
BseGI	GGATG	3 cut(s)	1363, 2114, 2395
BseLI	CCNNNNNNNGG	3 cut(s)	550, 686, 2290
BseMI	GCAATG	4 cut(s)	1320, 2199, 2304, 2369
BseMII	CTCAG	4 cut(s)	56, 276, 795, 1817
BseNI	ACTGG	7 cut(s)	148, 202, 478, 691, 1053, 1164, 1434
BseRI	GAGGAG	3 cut(s)	117, 527, 1209
BseSI	GKGCMC	2 cut(s)	1048, 2512
Bsh1236I	CGCG	2 cut(s)	1379, 2673
BshFI	GGCC	5 cut(s)	5, 70, 238, 468, 1890
BshNI	GGYRCC	3 cut(s)	2174, 2559, 2630
BsiHKAI	GWGCWC	2 cut(s)	1048, 2512
BsiHKCI	CYCGRG	1 cut(s)	2658
BsiSI	CCGG	1 cut(s)	133
BslFI	GGGAC	4 cut(s)	350, 463, 743, 2485
BslI	CCNNNNNNNGG	3 cut(s)	550, 686, 2290
BsmAI	GTCTC	7 cut(s)	604, 700, 1193, 1631, 1838, 2114, 2655
BsmBI	CGTCTC	1 cut(s)	1193
BsmFI	GGGAC	4 cut(s)	350, 463, 743, 2485
BsnI	GGCC	5 cut(s)	5, 70, 238, 468, 1890
Bso31I	GGTCTC	1 cut(s)	2114
BsoBI	CYCGRG	1 cut(s)	2658
Bsp119I	TTCGAA	3 cut(s)	934, 1974, 2287
Bsp1286I	GDGCHC	2 cut(s)	1048, 2512
Bsp1407I	TGTACA	1 cut(s)	2524
Bsp143I	GATC	9 cut(s)	258, 643, 958, 1395, 1731, 1995, 2272, 2486, 2619
Bsp19I	CCATGG	1 cut(s)	549
BspANI	GGCC	5 cut(s)	5, 70, 238, 468, 1890
BspCNI	CTCAG	4 cut(s)	55, 275, 796, 1818
BspFNI	CGCG	2 cut(s)	1379, 2673
BspHI	TCATGA	1 cut(s)	1902
BspLI	GGNNCC	7 cut(s)	731, 1543, 2176, 2302, 2473, 2561, 2632
BspMAI	CTGCAG	1 cut(s)	612
BspMI	ACCTGC	2 cut(s)	1578, 2162
BspOI	GCTAGC	1 cut(s)	2576
BspPI	GGATC	3 cut(s)	638, 966, 2267
BspQI	GCTCTTC	1 cut(s)	1482
BspT104I	TTCGAA	3 cut(s)	934, 1974, 2287
BspT107I	GGYRCC	3 cut(s)	2174, 2559, 2630
BspTI	CTTAAG	1 cut(s)	1615
BspTNI	GGTCTC	1 cut(s)	2114
BsrDI	GCAATG	4 cut(s)	1320, 2199, 2304, 2369
BsrGI	TGTACA	1 cut(s)	2524
BsrI	ACTGG	7 cut(s)	148, 202, 478, 691, 1053, 1164, 1434
BssECI	CCNNGG	5 cut(s)	549, 704, 1377, 1545, 2725
BssMI	GATC	9 cut(s)	258, 643, 958, 1395, 1731, 1995, 2272, 2486, 2619
BssNAI	GTATAC	1 cut(s)	492
BssNI	GRCGYC	1 cut(s)	2560
BssSI	CACGAG	2 cut(s)	528, 2421
BssT1I	CCWWGG	3 cut(s)	549, 1545, 2725
Bst1107I	GTATAC	1 cut(s)	492
Bst2BI	CACGAG	2 cut(s)	528, 2421
Bst2UI	CCWGG	3 cut(s)	207, 705, 2210
Bst4CI	ACNGT	6 cut(s)	454, 907, 1082, 1811, 2507, 2666
Bst6I	CTCTTC	5 cut(s)	205, 856, 1482, 1656, 1676
BstACI	GRCGYC	1 cut(s)	2560
BstAFI	CTTAAG	1 cut(s)	1615
BstAPI	GCANNNNNTGC	2 cut(s)	2063, 2417
BstAUI	TGTACA	1 cut(s)	2524
BstBAI	YACGTR	2 cut(s)	242, 841
BstBI	TTCGAA	3 cut(s)	934, 1974, 2287
BstC8I	GCNNGC	4 cut(s)	712, 1230, 2342, 2574
BstDEI	CTNAG	9 cut(s)	42, 186, 262, 755, 804, 1646, 1826, 2345, 2587
BstDSI	CCRYGG	2 cut(s)	549, 1377
BstF5I	GGATG	3 cut(s)	1363, 2114, 2395
BstFNI	CGCG	2 cut(s)	1379, 2673
BstH2I	RGCGCY	1 cut(s)	2563
BstHHI	GCGC	2 cut(s)	1087, 2562
BstKTI	GATC	9 cut(s)	261, 646, 961, 1398, 1734, 1998, 2275, 2489, 2622
BstMAI	GTCTC	7 cut(s)	604, 700, 1193, 1631, 1838, 2114, 2655
BstMBI	GATC	9 cut(s)	258, 643, 958, 1395, 1731, 1995, 2272, 2486, 2619
BstNI	CCWGG	3 cut(s)	207, 705, 2210
BstNSI	RCATGY	1 cut(s)	1598
BstSCI	CCNGG	3 cut(s)	205, 703, 2208
BstSFI	CTRYAG	3 cut(s)	608, 666, 1922
BstSLI	GKGCMC	2 cut(s)	1048, 2512
BstUI	CGCG	2 cut(s)	1379, 2673
BstV2I	GAAGAC	4 cut(s)	681, 801, 2025, 2682
BstX2I	RGATCY	5 cut(s)	958, 1731, 1995, 2272, 2486
BstYI	RGATCY	5 cut(s)	958, 1731, 1995, 2272, 2486
BstZ17I	GTATAC	1 cut(s)	492
BsuI	GTATCC	2 cut(s)	337, 511
BsuRI	GGCC	5 cut(s)	5, 70, 238, 468, 1890
BtgI	CCRYGG	2 cut(s)	549, 1377
BtgZI	GCGATG	1 cut(s)	2164
BtrI	CACGTC	1 cut(s)	1187
BtsCI	GGATG	3 cut(s)	1363, 2114, 2395
BtsIMutI	CAGTG	8 cut(s)	141, 801, 903, 1046, 1087, 1157, 1427, 2629
BveI	ACCTGC	2 cut(s)	1578, 2162
Cac8I	GCNNGC	4 cut(s)	712, 1230, 2342, 2574
CaiI	CAGNNNCTG	2 cut(s)	269, 2215
CciI	TCATGA	1 cut(s)	1902
CfoI	GCGC	2 cut(s)	1087, 2562
Cfr13I	GGNCC	5 cut(s)	541, 730, 1175, 1541, 2472
Cfr42I	CCGCGG	1 cut(s)	1380
Csp6I	GTAC	4 cut(s)	477, 836, 1209, 2525
CviQI	GTAC	4 cut(s)	477, 836, 1209, 2525
DdeI	CTNAG	9 cut(s)	42, 186, 262, 755, 804, 1646, 1826, 2345, 2587
DinI	GGCGCC	1 cut(s)	2561
DpnI	GATC	9 cut(s)	260, 645, 960, 1397, 1733, 1997, 2274, 2488, 2621
DpnII	GATC	9 cut(s)	258, 643, 958, 1395, 1731, 1995, 2272, 2486, 2619
EaeI	YGGCCR	3 cut(s)	3, 236, 466
Eam1104I	CTCTTC	5 cut(s)	205, 856, 1482, 1656, 1676
EarI	CTCTTC	5 cut(s)	205, 856, 1482, 1656, 1676
Eco130I	CCWWGG	3 cut(s)	549, 1545, 2725
Eco147I	AGGCCT	1 cut(s)	70
Eco31I	GGTCTC	1 cut(s)	2114
Eco47I	GGWCC	5 cut(s)	541, 730, 1175, 1541, 2472
Eco57I	CTGAAG	6 cut(s)	938, 1680, 1700, 2037, 2091, 2373
Eco88I	CYCGRG	1 cut(s)	2658
EcoRI	GAATTC	1 cut(s)	2034
EcoRII	CCWGG	3 cut(s)	205, 703, 2208
EcoT14I	CCWWGG	3 cut(s)	549, 1545, 2725
EcoT22I	ATGCAT	1 cut(s)	1069
EgeI	GGCGCC	1 cut(s)	2561
EheI	GGCGCC	1 cut(s)	2561
ErhI	CCWWGG	3 cut(s)	549, 1545, 2725
Esp3I	CGTCTC	1 cut(s)	1193
FalI	AAGNNNNNCTT	2 cut(s)	1505, 1537
FaqI	GGGAC	4 cut(s)	350, 463, 743, 2485
FauI	CCCGC	2 cut(s)	8, 1221
FauNDI	CATATG	1 cut(s)	463
FbaI	TGATCA	1 cut(s)	2619
FblI	GTMKAC	2 cut(s)	491, 1852
FokI	GGATG	3 cut(s)	1370, 2101, 2382
FspAI	RTGCGCAY	1 cut(s)	1086
FspBI	CTAG	9 cut(s)	716, 1010, 1206, 1298, 1671, 2375, 2454, 2573, 2712
FspI	TGCGCA	1 cut(s)	1086
GlaI	GCGC	2 cut(s)	1086, 2561
GsuI	CTGGAG	5 cut(s)	219, 599, 1451, 1613, 2319
HaeII	RGCGCY	1 cut(s)	2563
HaeIII	GGCC	5 cut(s)	5, 70, 238, 468, 1890
HapII	CCGG	1 cut(s)	133
HhaI	GCGC	2 cut(s)	1087, 2562
Hin1I	GRCGYC	1 cut(s)	2560
Hin6I	GCGC	2 cut(s)	1085, 2560
HinP1I	GCGC	2 cut(s)	1085, 2560
HincII	GTYRAC	2 cut(s)	892, 1688
HindII	GTYRAC	2 cut(s)	892, 1688
HindIII	AAGCTT	2 cut(s)	1481, 1739
HpaII	CCGG	1 cut(s)	133
HphI	GGTGA	6 cut(s)	701, 764, 1510, 2279, 2541, 2741
Hpy166II	GTNNAC	8 cut(s)	492, 838, 892, 1046, 1688, 1853, 2510, 2669
Hpy8I	GTNNAC	8 cut(s)	492, 838, 892, 1046, 1688, 1853, 2510, 2669
HpyCH4III	ACNGT	6 cut(s)	454, 907, 1082, 1811, 2507, 2666
HpyCH4IV	ACGT	4 cut(s)	241, 488, 840, 1186
HpyF3I	CTNAG	9 cut(s)	42, 186, 262, 755, 804, 1646, 1826, 2345, 2587
HpySE526I	ACGT	4 cut(s)	241, 488, 840, 1186
Hsp92I	GRCGYC	1 cut(s)	2560
HspAI	GCGC	2 cut(s)	1085, 2560
KasI	GGCGCC	1 cut(s)	2559
Ksp22I	TGATCA	1 cut(s)	2619
KspI	CCGCGG	1 cut(s)	1380
Kzo9I	GATC	9 cut(s)	258, 643, 958, 1395, 1731, 1995, 2272, 2486, 2619
LguI	GCTCTTC	1 cut(s)	1482
LmnI	GCTCC	4 cut(s)	1632, 2212, 2300, 2641
MaeI	CTAG	9 cut(s)	716, 1010, 1206, 1298, 1671, 2375, 2454, 2573, 2712
MaeII	ACGT	4 cut(s)	241, 488, 840, 1186
MaeIII	GTNAC	5 cut(s)	242, 1165, 1531, 1564, 2127
MalI	GATC	9 cut(s)	260, 645, 960, 1397, 1733, 1997, 2274, 2488, 2621
MboI	GATC	9 cut(s)	258, 643, 958, 1395, 1731, 1995, 2272, 2486, 2619
MfeI	CAATTG	2 cut(s)	331, 1814
MflI	RGATCY	5 cut(s)	958, 1731, 1995, 2272, 2486
MhlI	GDGCHC	2 cut(s)	1048, 2512
MlsI	TGGCCA	1 cut(s)	468
MluNI	TGGCCA	1 cut(s)	468
Mly113I	GGCGCC	1 cut(s)	2560
MlyI	GAGTC	9 cut(s)	222, 590, 815, 1687, 1693, 1889, 1900, 2233, 2459
MmeI	TCCRAC	1 cut(s)	111
Mox20I	TGGCCA	1 cut(s)	468
Mph1103I	ATGCAT	1 cut(s)	1069
MroXI	GAANNNNTTC	1 cut(s)	865
MscI	TGGCCA	1 cut(s)	468
MseI	TTAA	9 cut(s)	306, 909, 947, 1040, 1616, 1736, 2046, 2364, 2758
MslI	CAYNNNNRTG	2 cut(s)	2400, 2515
Msp20I	TGGCCA	1 cut(s)	468
MspA1I	CMGCKG	3 cut(s)	1228, 1379, 1718
MspCI	CTTAAG	1 cut(s)	1615
MspI	CCGG	1 cut(s)	133
MspR9I	CCNGG	3 cut(s)	207, 705, 2210
MunI	CAATTG	2 cut(s)	331, 1814
MvaI	CCWGG	3 cut(s)	207, 705, 2210
MvnI	CGCG	2 cut(s)	1379, 2673
NarI	GGCGCC	1 cut(s)	2560
NcoI	CCATGG	1 cut(s)	549
NdeI	CATATG	1 cut(s)	463
NdeII	GATC	9 cut(s)	258, 643, 958, 1395, 1731, 1995, 2272, 2486, 2619
NheI	GCTAGC	1 cut(s)	2572
NlaIV	GGNNCC	7 cut(s)	731, 1543, 2176, 2302, 2473, 2561, 2632
NmuCI	GTSAC	2 cut(s)	1531, 1564
NsbI	TGCGCA	1 cut(s)	1086
NsiI	ATGCAT	1 cut(s)	1069
NspI	RCATGY	1 cut(s)	1598
NspV	TTCGAA	3 cut(s)	934, 1974, 2287
PagI	TCATGA	1 cut(s)	1902
PaqCI	CACCTGC	1 cut(s)	2162
PceI	AGGCCT	1 cut(s)	70
PciSI	GCTCTTC	1 cut(s)	1482
PcsI	WCGNNNNNNNCGW	2 cut(s)	2445, 2656
PdmI	GAANNNNTTC	1 cut(s)	865
PfeI	GAWTC	7 cut(s)	587, 866, 1103, 1130, 1469, 1504, 1934
PfoI	TCCNGGA	1 cut(s)	205
PleI	GAGTC	9 cut(s)	221, 589, 814, 1687, 1692, 1889, 1900, 2232, 2458
PluTI	GGCGCC	1 cut(s)	2563
PpsI	GAGTC	9 cut(s)	221, 589, 814, 1687, 1692, 1889, 1900, 2232, 2458
Ppu21I	YACGTR	2 cut(s)	242, 841
PsiI	TTATAA	1 cut(s)	444
Psp6I	CCWGG	3 cut(s)	205, 703, 2208
PspGI	CCWGG	3 cut(s)	205, 703, 2208
PspN4I	GGNNCC	7 cut(s)	731, 1543, 2176, 2302, 2473, 2561, 2632
PspPI	GGNCC	5 cut(s)	541, 730, 1175, 1541, 2472
PstI	CTGCAG	1 cut(s)	612
PstNI	CAGNNNCTG	2 cut(s)	269, 2215
PsuI	RGATCY	5 cut(s)	958, 1731, 1995, 2272, 2486
PvuII	CAGCTG	1 cut(s)	1718
RsaI	GTAC	4 cut(s)	478, 837, 1210, 2526
RsaNI	GTAC	4 cut(s)	477, 836, 1209, 2525
RseI	CAYNNNNRTG	2 cut(s)	2400, 2515
SacII	CCGCGG	1 cut(s)	1380
SapI	GCTCTTC	1 cut(s)	1482
SaqAI	TTAA	9 cut(s)	306, 909, 947, 1040, 1616, 1736, 2046, 2364, 2758
Sau3AI	GATC	9 cut(s)	258, 643, 958, 1395, 1731, 1995, 2272, 2486, 2619
Sau96I	GGNCC	5 cut(s)	541, 730, 1175, 1541, 2472
ScaI	AGTACT	1 cut(s)	1210
SchI	GAGTC	9 cut(s)	222, 590, 815, 1687, 1693, 1889, 1900, 2233, 2459
ScrFI	CCNGG	3 cut(s)	207, 705, 2210
SduI	GDGCHC	2 cut(s)	1048, 2512
SfcI	CTRYAG	3 cut(s)	608, 666, 1922
SfoI	GGCGCC	1 cut(s)	2561
Sfr303I	CCGCGG	1 cut(s)	1380
SfuI	TTCGAA	3 cut(s)	934, 1974, 2287
SgrBI	CCGCGG	1 cut(s)	1380
SinI	GGWCC	5 cut(s)	541, 730, 1175, 1541, 2472
SmiMI	CAYNNNNRTG	2 cut(s)	2400, 2515
SmlI	CTYRAG	3 cut(s)	1615, 1908, 1928
SmoI	CTYRAG	3 cut(s)	1615, 1908, 1928
SpeI	ACTAGT	1 cut(s)	1670
SseBI	AGGCCT	1 cut(s)	70
SspDI	GGCGCC	1 cut(s)	2559
SspMI	CTAG	9 cut(s)	716, 1010, 1206, 1298, 1671, 2375, 2454, 2573, 2712
StuI	AGGCCT	1 cut(s)	70
StyD4I	CCNGG	3 cut(s)	205, 703, 2208
StyI	CCWWGG	3 cut(s)	549, 1545, 2725
TaaI	ACNGT	6 cut(s)	454, 907, 1082, 1811, 2507, 2666
TaiI	ACGT	4 cut(s)	244, 491, 843, 1189
TaqII	GACCGA	1 cut(s)	1163
TatI	WGTACW	2 cut(s)	1208, 2524
TauI	GCSGC	5 cut(s)	8, 238, 1379, 2171, 2743
TfiI	GAWTC	7 cut(s)	587, 866, 1103, 1130, 1469, 1504, 1934
Tru1I	TTAA	9 cut(s)	306, 909, 947, 1040, 1616, 1736, 2046, 2364, 2758
Tru9I	TTAA	9 cut(s)	306, 909, 947, 1040, 1616, 1736, 2046, 2364, 2758
TscAI	CASTG	8 cut(s)	148, 808, 910, 1053, 1087, 1164, 1434, 2629
TseFI	GTSAC	2 cut(s)	1531, 1564
Tsp45I	GTSAC	2 cut(s)	1531, 1564
TspGWI	ACGGA	2 cut(s)	533, 841
TspRI	CASTG	8 cut(s)	148, 808, 910, 1053, 1087, 1164, 1434, 2629
Vha464I	CTTAAG	1 cut(s)	1615
VneI	GTGCAC	2 cut(s)	1044, 2508
VpaK11BI	GGWCC	5 cut(s)	541, 730, 1175, 1541, 2472
XapI	RAATTY	6 cut(s)	1268, 1723, 1968, 2034, 2185, 2434
XceI	RCATGY	1 cut(s)	1598
XmiI	GTMKAC	2 cut(s)	491, 1852
XmnI	GAANNNNTTC	1 cut(s)	865
XspI	CTAG	9 cut(s)	716, 1010, 1206, 1298, 1671, 2375, 2454, 2573, 2712
ZrmI	AGTACT	1 cut(s)	1210
Zsp2I	ATGCAT	1 cut(s)	1069

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.