RLG00000005667

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0008096
Physical Location & Seq
Reverse (-)
706230 .. 710301
4072 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005667

Sequence Viewer

Length: 1668 bp
ATGATCTCCTCTGCACCCACGTCGCACCCAATCACTCCCTCCCCCTCCTCCTCCACCACCACCGCCGTTGCCGCCATTAGATCATCTACGGCCACCACCACCACCACCGCCCCCGCACACTCTCAGCTCCCGTCGCCTCTCTCCCGCCTCCCCCTTCCGCCGACGCTCGACCATGTGCTGCCGATCCCTGACGCCGCCGCCGGGCCCCCAATTCCGTGCCAGCTGGCCCGGGTTCGGATCTCGGATATTGCCCCGTATGACGGAGCCCCGACTGGGCCGTATGTGAGGGCGGTGGAGGCCCTGTCGGGGTCTCTGATGAGGCACAACGCCGCCGTCATCGAATTGGGAGCCGACGACGCTGCGCTGTTGCGCTGCGGCTTGGAAGCTTCCAGATTGTATTTTCGGAGCAGAGCTCAGCTTGGCGCCGGCAAAGGAAGCCGTGGAGTTCACATGTACAGGGCCGGAAGGGCTTTGGAAGATTGGGACTCATCACCGCCGTGTATGGCTGATGTTTTCCGGTGCATGGGGAAGGTGGCGCGCGTGGCATTGGCTGCAATAGCAAGGCATCTTCGTTTGCGCAGCGATGTTTTTAGCCATTTGCTTGATGATACTCCATTGCCGGCTAATGAAGTGTCCTCGTCAGTGCTTTTGGCAGCCTACACGAATGCATCATTGCAGAATGGGAAGGGTGCTATTGGGGGAGGGAAGCCAGGAATTAATGGTGAAGTGGAGAAGGGATTGTTGACATTGATTTCTTCGGACAGTCCTGGTATACAGGTGTGTGACCCCAATGGTCGTTGGTACTTGGCAGACAGTGGGTCAGCTCCTGGGGATCTTTTACTACTTACAGGTAAGGCACTCAGCCATGCTACCGCTGGCCTTCGCCCTGCTGCATCCTATAAAGCTGCTCCTGATTATTCCTCAGGCGTTAATAGTGGTGGGAGGACATCACTTGCATTTAGGCTCATGCCACAAGGTAATGCTATATTAGATTGTTCTCCCATTGCAGCAGCTGGTCATGTCATTCCCCAGAGTTATGTCCCAATATCTGTGAGCCAGTTTATGGACGATCTGTCTGCTGAGGAAGATGTTTTGTGCAATCATTCTGATAGTGCTTTTGTACCTCGAATCAATTTAAATAAGGATCCCTCATTAAGAAGTGTTCTCTCAGATCCCCTATCTGGTGCATTCCTTGAAGATGCCATGGTAGTTTCCTGCGGGCATTCATTTGGCGGTCTCATGTTGAGAAGAGTCATTGAATCATCAAGATGTACCCTCTGCAATGCAGAAATTGAGACCAGGTCTTTGGTTCCTAATCTTGCTCTTAGAGCTGCAGCTGCAGCAGTGAAGCTTGAGGATGATCGAAGGCTATTTCATAATGCTACTATCCGCAAGCGTCGGAAAGAGTTGGGTGACCAAATGGATCCATCACGAAGACCAAATAGGGAAAATGGAGATGTTGGTGATGATGGGATTAATCGTGGGGTGCAGTATCCGTTTTCAGTGAATGAAAAAGTAATGATTAAGGGGAACCGAAGGACTCCTGAAAAATTTGTTGGCAAGGAGGCAGTCATCACATCCCAGTGTCTGAATGGCTGGTACTTGCTTAAGATTATTGGAAGTGGAGAGAATGTTCGGTTGCAATACCGTTCGCTGAGGAAGATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

556

Amino Acids

58.98

Weight (kDa)

8.9

Isoelectric Point (pI)

51.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUB62-63_C PF23112 496 - 554 1.3e-36 U-box protein 62/63 C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 578
AccB1I GGYRCC 1 cut(s) 422
AccB7I CCANNNNNTGG 1 cut(s) 1063
AccI GTMKAC 1 cut(s) 772
AccII CGCG 2 cut(s) 538, 540
AclWI GGATC 8 cut(s) 178, 245, 840, 1139, 1152, 1166, 1418, 1431
AcoI YGGCCR 1 cut(s) 90
AcsI RAATTY 1 cut(s) 1550
AcyI GRCGYC 2 cut(s) 192, 423
AfaI GTAC 5 cut(s) 455, 803, 1122, 1273, 1601
AfiI CCNNNNNNNGG 8 cut(s) 201, 234, 260, 273, 306, 523, 1063, 1181
AflII CTTAAG 1 cut(s) 1607
AflIII ACRYGT 1 cut(s) 450
AgsI TTSAA 2 cut(s) 1196, 1259
AhdI GACNNNNNGTC 2 cut(s) 817, 1072
AjiI CACGTC 1 cut(s) 21
AjnI CCWGG 4 cut(s) 709, 766, 826, 1298
AjuI GAANNNNNNNTTGG 2 cut(s) 1539, 1571
AleI CACNNNNGTG 1 cut(s) 496
AloI GAACNNNNNNTCC 2 cut(s) 1617, 1649
Alw21I GWGCWC 1 cut(s) 415
Alw26I GTCTC 3 cut(s) 315, 1241, 1289
AlwI GGATC 8 cut(s) 178, 245, 840, 1139, 1152, 1166, 1418, 1431
AlwNI CAGNNNCTG 3 cut(s) 827, 1013, 1588
Ama87I CYCGRG 1 cut(s) 228
AoxI GGCC 7 cut(s) 90, 203, 225, 275, 297, 459, 877
ApaI GGGCCC 1 cut(s) 207
ApoI RAATTY 1 cut(s) 1550
ArsI GACNNNNNNTTYG 2 cut(s) 1288, 1320
AseI ATTAAT 2 cut(s) 717, 1476
AspLEI GCGC 6 cut(s) 364, 372, 425, 538, 540, 579
AspS9I GGNCC 6 cut(s) 203, 204, 226, 275, 298, 459
AsuC2I CCSGG 3 cut(s) 202, 229, 230
AsuHPI GGTGA 4 cut(s) 483, 734, 1424, 1475
AvaI CYCGRG 1 cut(s) 228
AxyI CCTNAGG 1 cut(s) 922
BaeGI GKGCMC 1 cut(s) 207
BamHI GGATCC 2 cut(s) 1144, 1423
BanI GGYRCC 1 cut(s) 422
BanII GRGCYC 3 cut(s) 207, 268, 415
BbsI GAAGAC 1 cut(s) 1441
Bbv12I GWGCWC 1 cut(s) 415
BbvCI CCTCAGC 2 cut(s) 1080, 1655
BccI CCATC 2 cut(s) 1435, 1463
BceAI ACGGC 6 cut(s) 50, 105, 262, 317, 423, 481
BcgI CGANNNNNNTGC 5 cut(s) 37, 341, 375, 1058, 1092
BciT130I CCWGG 4 cut(s) 711, 768, 828, 1300
BciVI GTATCC 1 cut(s) 1503
BcnI CCSGG 3 cut(s) 202, 229, 230
BcoDI GTCTC 3 cut(s) 315, 1241, 1289
BfaI CTAG 1 cut(s) 1666
BfmI CTRYAG 2 cut(s) 1332, 1338
BfoI RGCGCY 1 cut(s) 426
BfrI CTTAAG 1 cut(s) 1607
BfuI GTATCC 1 cut(s) 1503
BglI GCCNNNNNGGC 1 cut(s) 467
BglII AGATCT 1 cut(s) 1662
BlpI GCTNAGC 1 cut(s) 414
Bme1390I CCNGG 7 cut(s) 202, 229, 230, 711, 768, 828, 1300
BmeRI GACNNNNNGTC 2 cut(s) 817, 1072
BmeT110I CYCGRG 1 cut(s) 228
BmgBI CACGTC 1 cut(s) 21
BmgT120I GGNCC 6 cut(s) 203, 204, 226, 275, 298, 459
BmiI GGNNCC 9 cut(s) 205, 206, 265, 349, 424, 1146, 1311, 1425, 1532
BmrFI CCNGG 7 cut(s) 202, 229, 230, 711, 768, 828, 1300
BmrI ACTGGG 2 cut(s) 282, 1576
BmsI GCATC 4 cut(s) 574, 677, 902, 1189
BmuI ACTGGG 2 cut(s) 282, 1576
BpiI GAAGAC 1 cut(s) 1441
BplI GAGNNNNNCTC 2 cut(s) 397, 429
Bpu10I CCTNAGC 2 cut(s) 1080, 1655
Bpu1102I GCTNAGC 1 cut(s) 414
BpuEI CTTGAG 1 cut(s) 1373
BpuMI CCSGG 3 cut(s) 202, 229, 230
BsaHI GRCGYC 2 cut(s) 192, 423
BsaI GGTCTC 3 cut(s) 315, 1241, 1289
BsaJI CCNNGG 4 cut(s) 228, 439, 827, 1203
BsaWI WCCGGW 1 cut(s) 516
BsaXI ACNNNNNCTCC 4 cut(s) 287, 317, 1617, 1647
Bsc4I CCNNNNNNNGG 8 cut(s) 201, 234, 260, 273, 306, 523, 1063, 1181
Bse118I RCCGGY 2 cut(s) 425, 619
Bse1I ACTGG 3 cut(s) 277, 1057, 1582
Bse21I CCTNAGG 1 cut(s) 922
Bse3DI GCAATG 4 cut(s) 614, 671, 1002, 1288
BseBI CCWGG 4 cut(s) 711, 768, 828, 1300
BseDI CCNNGG 4 cut(s) 228, 439, 827, 1203
BseGI GGATG 3 cut(s) 893, 1363, 1577
BseLI CCNNNNNNNGG 8 cut(s) 201, 234, 260, 273, 306, 523, 1063, 1181
BseMI GCAATG 4 cut(s) 614, 671, 1002, 1288
BseMII CTCAG 7 cut(s) 137, 428, 874, 936, 1071, 1182, 1646
BseNI ACTGG 3 cut(s) 277, 1057, 1582
BsePI GCGCGC 1 cut(s) 536
BseRI GAGGAG 2 cut(s) 37, 40
BseSI GKGCMC 1 cut(s) 207
BsgI GTGCAG 1 cut(s) 1508
Bsh1236I CGCG 2 cut(s) 538, 540
BshFI GGCC 7 cut(s) 92, 205, 227, 277, 299, 461, 879
BshNI GGYRCC 1 cut(s) 422
BsiHKAI GWGCWC 1 cut(s) 415
BsiHKCI CYCGRG 1 cut(s) 228
BsiSI CCGG 6 cut(s) 201, 229, 426, 462, 517, 620
BslFI GGGAC 2 cut(s) 497, 1025
BslI CCNNNNNNNGG 8 cut(s) 201, 234, 260, 273, 306, 523, 1063, 1181
BsmAI GTCTC 3 cut(s) 315, 1241, 1289
BsmFI GGGAC 2 cut(s) 497, 1025
BsmI GAATGC 3 cut(s) 670, 1187, 1222
BsnI GGCC 7 cut(s) 92, 205, 227, 277, 299, 461, 879
Bso31I GGTCTC 3 cut(s) 315, 1241, 1289
BsoBI CYCGRG 1 cut(s) 228
Bsp120I GGGCCC 1 cut(s) 203
Bsp1286I GDGCHC 3 cut(s) 207, 268, 415
Bsp1407I TGTACA 1 cut(s) 453
Bsp1720I GCTNAGC 1 cut(s) 414
Bsp19I CCATGG 1 cut(s) 1203
BspANI GGCC 7 cut(s) 92, 205, 227, 277, 299, 461, 879
BspCNI CTCAG 7 cut(s) 136, 427, 873, 935, 1072, 1181, 1647
BspFNI CGCG 2 cut(s) 538, 540
BspLI GGNNCC 9 cut(s) 205, 206, 265, 349, 424, 1146, 1311, 1425, 1532
BspMAI CTGCAG 2 cut(s) 1336, 1342
BspPI GGATC 8 cut(s) 178, 245, 840, 1139, 1152, 1166, 1418, 1431
BspT107I GGYRCC 1 cut(s) 422
BspTI CTTAAG 1 cut(s) 1607
BspTNI GGTCTC 3 cut(s) 315, 1241, 1289
BsrDI GCAATG 4 cut(s) 614, 671, 1002, 1288
BsrFI RCCGGY 2 cut(s) 425, 619
BsrGI TGTACA 1 cut(s) 453
BsrI ACTGG 3 cut(s) 277, 1057, 1582
BssAI RCCGGY 2 cut(s) 425, 619
BssECI CCNNGG 4 cut(s) 228, 439, 827, 1203
BssHII GCGCGC 1 cut(s) 536
BssNAI GTATAC 1 cut(s) 773
BssNI GRCGYC 2 cut(s) 192, 423
BssT1I CCWWGG 1 cut(s) 1203
Bst1107I GTATAC 1 cut(s) 773
Bst2UI CCWGG 4 cut(s) 711, 768, 828, 1300
Bst4CI ACNGT 3 cut(s) 764, 815, 1649
Bst6I CTCTTC 1 cut(s) 1243
BstACI GRCGYC 2 cut(s) 192, 423
BstAFI CTTAAG 1 cut(s) 1607
BstAPI GCANNNNNTGC 1 cut(s) 551
BstAUI TGTACA 1 cut(s) 453
BstC8I GCNNGC 8 cut(s) 221, 225, 427, 538, 621, 877, 1220, 1394
BstDEI CTNAG 8 cut(s) 123, 414, 860, 922, 1080, 1168, 1325, 1655
BstDSI CCRYGG 2 cut(s) 439, 1203
BstEII GGTNACC 1 cut(s) 1412
BstF5I GGATG 3 cut(s) 893, 1363, 1577
BstFNI CGCG 2 cut(s) 538, 540
BstH2I RGCGCY 1 cut(s) 426
BstHHI GCGC 6 cut(s) 364, 372, 425, 538, 540, 579
BstMAI GTCTC 3 cut(s) 315, 1241, 1289
BstNI CCWGG 4 cut(s) 711, 768, 828, 1300
BstNSI RCATGY 1 cut(s) 454
BstPI GGTNACC 1 cut(s) 1412
BstSCI CCNGG 7 cut(s) 200, 227, 228, 709, 766, 826, 1298
BstSFI CTRYAG 2 cut(s) 1332, 1338
BstSLI GKGCMC 1 cut(s) 207
BstUI CGCG 2 cut(s) 538, 540
BstV2I GAAGAC 1 cut(s) 1441
BstX2I RGATCY 6 cut(s) 237, 832, 1144, 1171, 1423, 1662
BstXI CCANNNNNNTGG 1 cut(s) 1306
BstYI RGATCY 6 cut(s) 237, 832, 1144, 1171, 1423, 1662
BstZ17I GTATAC 1 cut(s) 773
Bsu36I CCTNAGG 1 cut(s) 922
BsuI GTATCC 1 cut(s) 1503
BsuRI GGCC 7 cut(s) 92, 205, 227, 277, 299, 461, 879
BtgI CCRYGG 2 cut(s) 439, 1203
BtgZI GCGATG 1 cut(s) 597
BtrI CACGTC 1 cut(s) 21
BtsCI GGATG 3 cut(s) 893, 1363, 1577
BtsI GCAGTG 1 cut(s) 1350
BtsIMutI CAGTG 5 cut(s) 648, 820, 1350, 1509, 1589
Cac8I GCNNGC 8 cut(s) 221, 225, 427, 538, 621, 877, 1220, 1394
CaiI CAGNNNCTG 3 cut(s) 827, 1013, 1588
CfoI GCGC 6 cut(s) 364, 372, 425, 538, 540, 579
Cfr10I RCCGGY 2 cut(s) 425, 619
Cfr13I GGNCC 6 cut(s) 203, 204, 226, 275, 298, 459
Cfr9I CCCGGG 1 cut(s) 228
CseI GACGC 4 cut(s) 172, 200, 365, 1385
CsiI ACCWGGT 1 cut(s) 1298
Csp6I GTAC 5 cut(s) 454, 802, 1121, 1272, 1600
CspCI CAANNNNNGTGG 2 cut(s) 49, 84
CviAII CATG 8 cut(s) 173, 451, 523, 866, 967, 1019, 1204, 1240
CviQI GTAC 5 cut(s) 454, 802, 1121, 1272, 1600
DdeI CTNAG 8 cut(s) 123, 414, 860, 922, 1080, 1168, 1325, 1655
DinI GGCGCC 1 cut(s) 424
DraI TTTAAA 1 cut(s) 1137
DriI GACNNNNNGTC 2 cut(s) 817, 1072
EaeI YGGCCR 1 cut(s) 90
Eam1104I CTCTTC 1 cut(s) 1243
Eam1105I GACNNNNNGTC 2 cut(s) 817, 1072
EarI CTCTTC 1 cut(s) 1243
EciI GGCGGA 1 cut(s) 147
Ecl136II GAGCTC 1 cut(s) 413
Eco130I CCWWGG 1 cut(s) 1203
Eco24I GRGCYC 3 cut(s) 207, 268, 415
Eco31I GGTCTC 3 cut(s) 315, 1241, 1289
Eco53kI GAGCTC 1 cut(s) 413
Eco81I CCTNAGG 1 cut(s) 922
Eco88I CYCGRG 1 cut(s) 228
Eco91I GGTNACC 1 cut(s) 1412
EcoICRI GAGCTC 1 cut(s) 413
EcoO109I RGGNCCY 2 cut(s) 204, 298
EcoO65I GGTNACC 1 cut(s) 1412
EcoRII CCWGG 4 cut(s) 709, 766, 826, 1298
EcoT14I CCWWGG 1 cut(s) 1203
EcoT22I ATGCAT 1 cut(s) 670
EcoT38I GRGCYC 3 cut(s) 207, 268, 415
EgeI GGCGCC 1 cut(s) 424
EheI GGCGCC 1 cut(s) 424
ErhI CCWWGG 1 cut(s) 1203
FaeI CATG 8 cut(s) 176, 454, 526, 869, 970, 1022, 1207, 1243
FaqI GGGAC 2 cut(s) 497, 1025
FatI CATG 8 cut(s) 172, 450, 522, 865, 966, 1018, 1203, 1239
FauI CCCGC 3 cut(s) 121, 152, 1211
FblI GTMKAC 1 cut(s) 772
FokI GGATG 3 cut(s) 880, 1370, 1564
FriOI GRGCYC 3 cut(s) 207, 268, 415
FspBI CTAG 1 cut(s) 1666
FspI TGCGCA 1 cut(s) 578
GlaI GCGC 6 cut(s) 363, 371, 424, 537, 539, 578
HaeII RGCGCY 1 cut(s) 426
HaeIII GGCC 7 cut(s) 92, 205, 227, 277, 299, 461, 879
HapII CCGG 6 cut(s) 201, 229, 426, 462, 517, 620
HgaI GACGC 4 cut(s) 172, 200, 365, 1385
HhaI GCGC 6 cut(s) 364, 372, 425, 538, 540, 579
Hin1I GRCGYC 2 cut(s) 192, 423
Hin1II CATG 8 cut(s) 176, 454, 526, 869, 970, 1022, 1207, 1243
Hin6I GCGC 6 cut(s) 362, 370, 423, 536, 538, 577
HinP1I GCGC 6 cut(s) 362, 370, 423, 536, 538, 577
HincII GTYRAC 1 cut(s) 744
HindII GTYRAC 1 cut(s) 744
HindIII AAGCTT 2 cut(s) 384, 1349
HinfI GANTC 5 cut(s) 485, 1128, 1251, 1259, 1540
HpaII CCGG 6 cut(s) 201, 229, 426, 462, 517, 620
HphI GGTGA 4 cut(s) 483, 734, 1424, 1475
Hpy166II GTNNAC 3 cut(s) 448, 744, 773
Hpy188I TCNGA 9 cut(s) 237, 244, 315, 405, 760, 1108, 1171, 1401, 1590
Hpy188III TCNNGA 5 cut(s) 390, 911, 1266, 1431, 1544
Hpy8I GTNNAC 3 cut(s) 448, 744, 773
Hpy99I CGWCG 6 cut(s) 25, 136, 166, 356, 359, 1401
HpyAV CCTTC 8 cut(s) 164, 459, 523, 679, 727, 890, 1359, 1530
HpyCH4III ACNGT 3 cut(s) 764, 815, 1649
HpyCH4IV ACGT 1 cut(s) 20
HpyF3I CTNAG 8 cut(s) 123, 414, 860, 922, 1080, 1168, 1325, 1655
HpySE526I ACGT 1 cut(s) 20
Hsp92I GRCGYC 2 cut(s) 192, 423
Hsp92II CATG 8 cut(s) 176, 454, 526, 869, 970, 1022, 1207, 1243
HspAI GCGC 6 cut(s) 362, 370, 423, 536, 538, 577
KasI GGCGCC 1 cut(s) 422
KroI GCCGGC 2 cut(s) 425, 619
KroNI GCCGGC 2 cut(s) 427, 621
LmnI GCTCC 6 cut(s) 132, 263, 347, 405, 829, 913
LweI GCATC 4 cut(s) 574, 677, 902, 1189
MabI ACCWGGT 1 cut(s) 1298
MaeI CTAG 1 cut(s) 1666
MaeII ACGT 1 cut(s) 20
MaeIII GTNAC 2 cut(s) 782, 1412
MboII GAAGA 7 cut(s) 488, 560, 747, 1097, 1208, 1260, 1446
MflI RGATCY 6 cut(s) 237, 832, 1144, 1171, 1423, 1662
MhlI GDGCHC 3 cut(s) 207, 268, 415
MluCI AATT 6 cut(s) 210, 341, 714, 1132, 1290, 1550
Mly113I GGCGCC 1 cut(s) 423
MlyI GAGTC 3 cut(s) 479, 1260, 1534
MmeI TCCRAC 1 cut(s) 1379
Mph1103I ATGCAT 1 cut(s) 670
MroNI GCCGGC 2 cut(s) 425, 619
MseI TTAA 7 cut(s) 717, 930, 1136, 1154, 1476, 1524, 1608
MslI CAYNNNNRTG 3 cut(s) 496, 1267, 1582
MspA1I CMGCKG 4 cut(s) 223, 875, 1013, 1337
MspCI CTTAAG 1 cut(s) 1607
MspI CCGG 6 cut(s) 201, 229, 426, 462, 517, 620
MspR9I CCNGG 7 cut(s) 202, 229, 230, 711, 768, 828, 1300
Mva1269I GAATGC 3 cut(s) 670, 1187, 1222
MvaI CCWGG 4 cut(s) 711, 768, 828, 1300
MvnI CGCG 2 cut(s) 538, 540
NaeI GCCGGC 2 cut(s) 427, 621
NarI GGCGCC 1 cut(s) 423
NciI CCSGG 3 cut(s) 202, 229, 230
NcoI CCATGG 1 cut(s) 1203
NgoMIV GCCGGC 2 cut(s) 425, 619
NlaIII CATG 8 cut(s) 176, 454, 526, 869, 970, 1022, 1207, 1243
NlaIV GGNNCC 9 cut(s) 205, 206, 265, 349, 424, 1146, 1311, 1425, 1532
NmuCI GTSAC 2 cut(s) 782, 1412
NsbI TGCGCA 1 cut(s) 578
NsiI ATGCAT 1 cut(s) 670
NspI RCATGY 1 cut(s) 454
OliI CACNNNNGTG 1 cut(s) 496
PauI GCGCGC 1 cut(s) 536
PciI ACATGT 1 cut(s) 450
PctI GAATGC 3 cut(s) 670, 1187, 1222
PdiI GCCGGC 2 cut(s) 427, 621
PfeI GAWTC 2 cut(s) 1128, 1259
PflFI GACNNNGTC 1 cut(s) 1300
PflMI CCANNNNNTGG 1 cut(s) 1063
PleI GAGTC 3 cut(s) 479, 1259, 1534
PluTI GGCGCC 1 cut(s) 426
PpsI GAGTC 3 cut(s) 479, 1259, 1534
PscI ACATGT 1 cut(s) 450
PshBI ATTAAT 2 cut(s) 717, 1476
Psp124BI GAGCTC 1 cut(s) 415
Psp6I CCWGG 4 cut(s) 709, 766, 826, 1298
PspEI GGTNACC 1 cut(s) 1412
PspGI CCWGG 4 cut(s) 709, 766, 826, 1298
PspN4I GGNNCC 9 cut(s) 205, 206, 265, 349, 424, 1146, 1311, 1425, 1532
PspOMI GGGCCC 1 cut(s) 203
PspPI GGNCC 6 cut(s) 203, 204, 226, 275, 298, 459
PstI CTGCAG 2 cut(s) 1336, 1342
PstNI CAGNNNCTG 3 cut(s) 827, 1013, 1588
PsuI RGATCY 6 cut(s) 237, 832, 1144, 1171, 1423, 1662
PsyI GACNNNGTC 1 cut(s) 1300
PteI GCGCGC 1 cut(s) 536
PvuII CAGCTG 3 cut(s) 223, 1013, 1337
RsaI GTAC 5 cut(s) 455, 803, 1122, 1273, 1601
RsaNI GTAC 5 cut(s) 454, 802, 1121, 1272, 1600
RseI CAYNNNNRTG 3 cut(s) 496, 1267, 1582
SacI GAGCTC 1 cut(s) 415
SaqAI TTAA 7 cut(s) 717, 930, 1136, 1154, 1476, 1524, 1608
Sau96I GGNCC 6 cut(s) 203, 204, 226, 275, 298, 459
SchI GAGTC 3 cut(s) 479, 1260, 1534
ScrFI CCNGG 7 cut(s) 202, 229, 230, 711, 768, 828, 1300
SduI GDGCHC 3 cut(s) 207, 268, 415
SexAI ACCWGGT 1 cut(s) 1298
SfaNI GCATC 4 cut(s) 574, 677, 902, 1189
SfcI CTRYAG 2 cut(s) 1332, 1338
SfoI GGCGCC 1 cut(s) 424
SmaI CCCGGG 1 cut(s) 230
SmiI ATTTAAAT 1 cut(s) 1137
SmiMI CAYNNNNRTG 3 cut(s) 496, 1267, 1582
SmlI CTYRAG 2 cut(s) 1352, 1607
SmoI CTYRAG 2 cut(s) 1352, 1607
Sse9I AATT 6 cut(s) 210, 341, 714, 1132, 1290, 1550
SspDI GGCGCC 1 cut(s) 422
SspMI CTAG 1 cut(s) 1666
SstI GAGCTC 1 cut(s) 415
StyD4I CCNGG 7 cut(s) 200, 227, 228, 709, 766, 826, 1298
StyI CCWWGG 1 cut(s) 1203
SwaI ATTTAAAT 1 cut(s) 1137
TaaI ACNGT 3 cut(s) 764, 815, 1649
TaiI ACGT 1 cut(s) 23
TaqI TCGA 4 cut(s) 168, 339, 1126, 1363
TasI AATT 6 cut(s) 210, 341, 714, 1132, 1290, 1550
TatI WGTACW 1 cut(s) 453
TauI GCSGC 5 cut(s) 74, 197, 200, 332, 378
TfiI GAWTC 2 cut(s) 1128, 1259
Tru1I TTAA 7 cut(s) 717, 930, 1136, 1154, 1476, 1524, 1608
Tru9I TTAA 7 cut(s) 717, 930, 1136, 1154, 1476, 1524, 1608
TscAI CASTG 5 cut(s) 648, 820, 1350, 1509, 1589
TseFI GTSAC 2 cut(s) 782, 1412
Tsp45I GTSAC 2 cut(s) 782, 1412
TspDTI ATGAA 4 cut(s) 642, 1215, 1364, 1524
TspGWI ACGGA 3 cut(s) 204, 276, 1485
TspMI CCCGGG 1 cut(s) 228
TspRI CASTG 5 cut(s) 648, 820, 1350, 1509, 1589
Tth111I GACNNNGTC 1 cut(s) 1300
Van91I CCANNNNNTGG 1 cut(s) 1063
Vha464I CTTAAG 1 cut(s) 1607
VspI ATTAAT 2 cut(s) 717, 1476
XapI RAATTY 1 cut(s) 1550
XceI RCATGY 1 cut(s) 454
XcmI CCANNNNNNNNNTGG 2 cut(s) 872, 1589
XmaI CCCGGG 1 cut(s) 228
XmiI GTMKAC 1 cut(s) 772
XspI CTAG 1 cut(s) 1666
Zsp2I ATGCAT 1 cut(s) 670
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.