Rroxscaffold_5G00386820

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0008096
Physical Location & Seq
Forward (+)
65595101 .. 65599858
4758 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00386820.1

Sequence Viewer

Length: 1677 bp
ATGGTAGTGATCATGATCTCCTCTGCACCCACGTCGCACCCAATCACTCCCTCCCCCTCCTCCACCACCACCGCCGTCGCCGCCATTAGATCATCTACGGCCACCACCACCATCACCGCCCCCGCACACTCTCAGCTCCCGTCGCCTCTCTCCCGCCTCCCCCTTCCGCCGACGCTCGACCATGTGCTGCCGATCCCTGACGCCGCCGCCGGGACCACAATCCCGTGCCAGCTGGCCCGGGTTCGGATCTCGGATATTTCCCCCTACGACGGAGCCCCGACCGGGACGTATGTGAGGGCGGTGGAGGCGCTGTCGGGGTCTCTGATGAGGCACAACGCCGCCGTCATCGAATTGGGAGCCGACGACGCTGCGCTGTTGCGCTGCGGCTTGGAAGCTTCCAGATTGTATTTTCGGAGCAGAGCTCAGCTTGGCGCCGGCAAAGGAAGCCGTGGAGTTTACATGTACAGGGCCGGAAGGGCTTTGGAAGATTGGGACTCATCCCCGCCGTGCATGGCTGATGTTTTCAGGTGCATGGGGAGGGCGGCGCGTGTGGTTTTGTCTGCAATTGCAAGGCATCTGCGTTTGCGCAGCGATGTTTTTAGCCATTTGCTTGATGATACTCCATTGCCGGCTAATGAAGTGTCCTCCTCAGTGCTTTTGGCAGCCTACACGAATGCGTCGTTGCAGAATGGGAAGGGTGCTATTGGGGGAGGGAAGCCAGGAATTAATGGTGAAGTGGAGAAGGGATTGTTGACATTGATTTTTTCGGACAGTCCTGGTATACAGGTGTGTGACCCCAATGGTCGTTGGTACTTGGCAGACAGTGGGTCAGCTCCTGGGGATCTTTTACTACTTACAGGTAAGGCACTCAGCCATGCTACCGCTGGCCTTCGCCCTGCTGCATCCTATAAAGCTGCTCCTGATTATTCCTCAGGCGTTAATAGTGGTGGGAGGACATCACTTGCATTTAGGCTCATGCCACAAGGTAATGCTATATTAGATTGTTCTCCCATTGCAGCAGCTGGTCATGTCATTCCCCAGAGTTATGTCCCAATATCTGTAAGCCAGTTTATGGACGATCTTTCTGCTGAGGAAGATGTTTTGTGCAGTCATTCTGATAGTGCTTTTGTACCTCGAATCAATTTAAATAAGGATCCCTCATTAAGAAGTGTTCTCTCAGATCCCCTATCTGGTGCATTCCTTGAAGATGCCATGGTAGTTTCCTGCGGGCATTCATTTGGCGGTCTCATGTTGAGAAGAGTCATTGAATCATCAAGATGTACCCTCTGCAATGCAGAAATTGAGACCAGGTCTTTGGTTCCTAATCTTGCTCTTAGAGCTGCAGCTGCAGCAGTGAAGCTTGAGGATGATCGAAGGCTATTTCATAATGCTACTATCCGCAAGCGTCGGAAAGAGTTGGGTGACCAAATGGATCCATCACGAAGACCAAATAGGGAAAATGGAGATGTTGGTGATGATGGGATTAATCGTGGGGTGCAGTATCCGTTTTCAGTGAATGAAAAAGTAATGATTAAGGGGAACCGAAGGACTCCTGAAAAATTTGTTGGCAAGGAGGCAGTCATCACATCCCAGTGTCTGAATGGCTGGTACTTGCTTAAGATTATTGGAAGCGGAGAGAATGTTCGGTTGCAATACCGTTCGCTGAGGAAGATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

558

Amino Acids

59.48

Weight (kDa)

8.9

Isoelectric Point (pI)

51.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUB62-63_C PF23112 499 - 557 1.3e-36 U-box protein 62/63 C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 587
AccB1I GGYRCC 1 cut(s) 431
AccB7I CCANNNNNTGG 1 cut(s) 1072
AccI GTMKAC 1 cut(s) 781
AccII CGCG 1 cut(s) 547
AclWI GGATC 8 cut(s) 187, 254, 849, 1148, 1161, 1175, 1427, 1440
AcoI YGGCCR 1 cut(s) 99
AcsI RAATTY 1 cut(s) 1559
AcyI GRCGYC 2 cut(s) 201, 432
AfaI GTAC 5 cut(s) 464, 812, 1131, 1282, 1610
AfiI CCNNNNNNNGG 6 cut(s) 210, 243, 269, 282, 1072, 1190
AflII CTTAAG 1 cut(s) 1616
AflIII ACRYGT 1 cut(s) 459
AgsI TTSAA 2 cut(s) 1205, 1268
AhdI GACNNNNNGTC 1 cut(s) 826
AjiI CACGTC 1 cut(s) 33
AjnI CCWGG 4 cut(s) 718, 775, 835, 1307
AjuI GAANNNNNNNTTGG 2 cut(s) 1548, 1580
AloI GAACNNNNNNTCC 2 cut(s) 1626, 1658
Alw21I GWGCWC 1 cut(s) 424
Alw26I GTCTC 3 cut(s) 324, 1250, 1298
AlwI GGATC 8 cut(s) 187, 254, 849, 1148, 1161, 1175, 1427, 1440
AlwNI CAGNNNCTG 3 cut(s) 836, 1022, 1597
Ama87I CYCGRG 1 cut(s) 237
AoxI GGCC 4 cut(s) 99, 234, 468, 886
ApoI RAATTY 1 cut(s) 1559
ArsI GACNNNNNNTTYG 2 cut(s) 1297, 1329
AseI ATTAAT 2 cut(s) 726, 1485
AspLEI GCGC 6 cut(s) 310, 373, 381, 434, 547, 588
AspS9I GGNCC 3 cut(s) 213, 235, 468
AsuC2I CCSGG 4 cut(s) 211, 238, 239, 283
AsuHPI GGTGA 4 cut(s) 106, 743, 1433, 1484
AvaI CYCGRG 1 cut(s) 237
AvaII GGWCC 1 cut(s) 213
AxyI CCTNAGG 1 cut(s) 931
BamHI GGATCC 2 cut(s) 1153, 1432
BanI GGYRCC 1 cut(s) 431
BanII GRGCYC 2 cut(s) 277, 424
BbsI GAAGAC 1 cut(s) 1450
Bbv12I GWGCWC 1 cut(s) 424
BbvCI CCTCAGC 2 cut(s) 1089, 1664
BccI CCATC 3 cut(s) 119, 1444, 1472
BceAI ACGGC 5 cut(s) 59, 114, 326, 432, 490
BcgI CGANNNNNNTGC 6 cut(s) 15, 49, 350, 384, 1067, 1101
BciT130I CCWGG 4 cut(s) 720, 777, 837, 1309
BciVI GTATCC 1 cut(s) 1512
BclI TGATCA 1 cut(s) 9
BcnI CCSGG 4 cut(s) 211, 238, 239, 283
BcoDI GTCTC 3 cut(s) 324, 1250, 1298
BfaI CTAG 1 cut(s) 1675
BfmI CTRYAG 2 cut(s) 1341, 1347
BfoI RGCGCY 2 cut(s) 311, 435
BfrI CTTAAG 1 cut(s) 1616
BfuI GTATCC 1 cut(s) 1512
BglI GCCNNNNNGGC 1 cut(s) 476
BglII AGATCT 1 cut(s) 1671
BlpI GCTNAGC 1 cut(s) 423
Bme1390I CCNGG 8 cut(s) 211, 238, 239, 283, 720, 777, 837, 1309
Bme18I GGWCC 1 cut(s) 213
BmeRI GACNNNNNGTC 1 cut(s) 826
BmeT110I CYCGRG 1 cut(s) 237
BmgBI CACGTC 1 cut(s) 33
BmgT120I GGNCC 3 cut(s) 213, 235, 468
BmiI GGNNCC 8 cut(s) 214, 274, 358, 433, 1155, 1320, 1434, 1541
BmrFI CCNGG 8 cut(s) 211, 238, 239, 283, 720, 777, 837, 1309
BmrI ACTGGG 1 cut(s) 1585
BmsI GCATC 3 cut(s) 583, 911, 1198
BmuI ACTGGG 1 cut(s) 1585
BpiI GAAGAC 1 cut(s) 1450
BplI GAGNNNNNCTC 2 cut(s) 406, 438
Bpu10I CCTNAGC 2 cut(s) 1089, 1664
Bpu1102I GCTNAGC 1 cut(s) 423
BpuEI CTTGAG 1 cut(s) 1382
BpuMI CCSGG 4 cut(s) 211, 238, 239, 283
BsaBI GATNNNNATC 1 cut(s) 14
BsaHI GRCGYC 2 cut(s) 201, 432
BsaI GGTCTC 3 cut(s) 324, 1250, 1298
BsaJI CCNNGG 4 cut(s) 237, 448, 836, 1212
BsaXI ACNNNNNCTCC 4 cut(s) 296, 326, 1626, 1656
Bsc4I CCNNNNNNNGG 6 cut(s) 210, 243, 269, 282, 1072, 1190
Bse118I RCCGGY 2 cut(s) 434, 628
Bse1I ACTGG 2 cut(s) 1066, 1591
Bse21I CCTNAGG 1 cut(s) 931
Bse3DI GCAATG 3 cut(s) 623, 1011, 1297
Bse8I GATNNNNATC 1 cut(s) 14
BseBI CCWGG 4 cut(s) 720, 777, 837, 1309
BseDI CCNNGG 4 cut(s) 237, 448, 836, 1212
BseGI GGATG 4 cut(s) 497, 902, 1372, 1586
BseJI GATNNNNATC 1 cut(s) 14
BseLI CCNNNNNNNGG 6 cut(s) 210, 243, 269, 282, 1072, 1190
BseMI GCAATG 3 cut(s) 623, 1011, 1297
BseMII CTCAG 8 cut(s) 146, 437, 663, 883, 945, 1080, 1191, 1655
BseNI ACTGG 2 cut(s) 1066, 1591
BseRI GAGGAG 3 cut(s) 10, 49, 637
BsgI GTGCAG 3 cut(s) 9, 1126, 1517
Bsh1236I CGCG 1 cut(s) 547
Bsh1285I CGRYCG 1 cut(s) 282
BshFI GGCC 4 cut(s) 101, 236, 470, 888
BshNI GGYRCC 1 cut(s) 431
BsiEI CGRYCG 1 cut(s) 282
BsiHKAI GWGCWC 1 cut(s) 424
BsiHKCI CYCGRG 1 cut(s) 237
BsiSI CCGG 6 cut(s) 210, 238, 282, 435, 471, 629
BslFI GGGAC 4 cut(s) 226, 298, 506, 1034
BslI CCNNNNNNNGG 6 cut(s) 210, 243, 269, 282, 1072, 1190
BsmAI GTCTC 3 cut(s) 324, 1250, 1298
BsmFI GGGAC 4 cut(s) 226, 298, 506, 1034
BsmI GAATGC 3 cut(s) 679, 1196, 1231
BsnI GGCC 4 cut(s) 101, 236, 470, 888
Bso31I GGTCTC 3 cut(s) 324, 1250, 1298
BsoBI CYCGRG 1 cut(s) 237
Bsp1286I GDGCHC 2 cut(s) 277, 424
Bsp1407I TGTACA 1 cut(s) 462
Bsp1720I GCTNAGC 1 cut(s) 423
Bsp19I CCATGG 1 cut(s) 1212
BspANI GGCC 4 cut(s) 101, 236, 470, 888
BspCNI CTCAG 8 cut(s) 145, 436, 662, 882, 944, 1081, 1190, 1656
BspFNI CGCG 1 cut(s) 547
BspHI TCATGA 1 cut(s) 12
BspLI GGNNCC 8 cut(s) 214, 274, 358, 433, 1155, 1320, 1434, 1541
BspMAI CTGCAG 2 cut(s) 1345, 1351
BspPI GGATC 8 cut(s) 187, 254, 849, 1148, 1161, 1175, 1427, 1440
BspT107I GGYRCC 1 cut(s) 431
BspTI CTTAAG 1 cut(s) 1616
BspTNI GGTCTC 3 cut(s) 324, 1250, 1298
BsrDI GCAATG 3 cut(s) 623, 1011, 1297
BsrFI RCCGGY 2 cut(s) 434, 628
BsrGI TGTACA 1 cut(s) 462
BsrI ACTGG 2 cut(s) 1066, 1591
BssAI RCCGGY 2 cut(s) 434, 628
BssECI CCNNGG 4 cut(s) 237, 448, 836, 1212
BssNAI GTATAC 1 cut(s) 782
BssNI GRCGYC 2 cut(s) 201, 432
BssT1I CCWWGG 1 cut(s) 1212
Bst1107I GTATAC 1 cut(s) 782
Bst2UI CCWGG 4 cut(s) 720, 777, 837, 1309
Bst4CI ACNGT 3 cut(s) 773, 824, 1658
Bst6I CTCTTC 1 cut(s) 1252
BstACI GRCGYC 2 cut(s) 201, 432
BstAFI CTTAAG 1 cut(s) 1616
BstAUI TGTACA 1 cut(s) 462
BstC8I GCNNGC 7 cut(s) 230, 234, 436, 630, 886, 1229, 1403
BstDEI CTNAG 9 cut(s) 132, 423, 649, 869, 931, 1089, 1177, 1334, 1664
BstDSI CCRYGG 2 cut(s) 448, 1212
BstEII GGTNACC 1 cut(s) 1421
BstF5I GGATG 4 cut(s) 497, 902, 1372, 1586
BstFNI CGCG 1 cut(s) 547
BstH2I RGCGCY 2 cut(s) 311, 435
BstHHI GCGC 6 cut(s) 310, 373, 381, 434, 547, 588
BstMAI GTCTC 3 cut(s) 324, 1250, 1298
BstMCI CGRYCG 1 cut(s) 282
BstMWI GCNNNNNNNGC 9 cut(s) 80, 142, 305, 365, 444, 476, 1337, 1346, 1349
BstNI CCWGG 4 cut(s) 720, 777, 837, 1309
BstNSI RCATGY 1 cut(s) 463
BstPI GGTNACC 1 cut(s) 1421
BstSCI CCNGG 8 cut(s) 209, 236, 237, 281, 718, 775, 835, 1307
BstSFI CTRYAG 2 cut(s) 1341, 1347
BstUI CGCG 1 cut(s) 547
BstV2I GAAGAC 1 cut(s) 1450
BstX2I RGATCY 6 cut(s) 246, 841, 1153, 1180, 1432, 1671
BstXI CCANNNNNNTGG 1 cut(s) 1315
BstYI RGATCY 6 cut(s) 246, 841, 1153, 1180, 1432, 1671
BstZ17I GTATAC 1 cut(s) 782
Bsu36I CCTNAGG 1 cut(s) 931
BsuI GTATCC 1 cut(s) 1512
BsuRI GGCC 4 cut(s) 101, 236, 470, 888
BtgI CCRYGG 2 cut(s) 448, 1212
BtgZI GCGATG 1 cut(s) 606
BtrI CACGTC 1 cut(s) 33
BtsCI GGATG 4 cut(s) 497, 902, 1372, 1586
BtsI GCAGTG 1 cut(s) 1359
BtsIMutI CAGTG 5 cut(s) 657, 829, 1359, 1518, 1598
Cac8I GCNNGC 7 cut(s) 230, 234, 436, 630, 886, 1229, 1403
CaiI CAGNNNCTG 3 cut(s) 836, 1022, 1597
CciI TCATGA 1 cut(s) 12
CfoI GCGC 6 cut(s) 310, 373, 381, 434, 547, 588
Cfr10I RCCGGY 2 cut(s) 434, 628
Cfr13I GGNCC 3 cut(s) 213, 235, 468
Cfr9I CCCGGG 1 cut(s) 237
CseI GACGC 5 cut(s) 181, 209, 374, 666, 1394
CsiI ACCWGGT 1 cut(s) 1307
Csp6I GTAC 5 cut(s) 463, 811, 1130, 1281, 1609
CviQI GTAC 5 cut(s) 463, 811, 1130, 1281, 1609
DdeI CTNAG 9 cut(s) 132, 423, 649, 869, 931, 1089, 1177, 1334, 1664
DinI GGCGCC 1 cut(s) 433
DraI TTTAAA 1 cut(s) 1146
DriI GACNNNNNGTC 1 cut(s) 826
EaeI YGGCCR 1 cut(s) 99
Eam1104I CTCTTC 1 cut(s) 1252
Eam1105I GACNNNNNGTC 1 cut(s) 826
EarI CTCTTC 1 cut(s) 1252
EciI GGCGGA 1 cut(s) 156
Ecl136II GAGCTC 1 cut(s) 422
Eco130I CCWWGG 1 cut(s) 1212
Eco24I GRGCYC 2 cut(s) 277, 424
Eco31I GGTCTC 3 cut(s) 324, 1250, 1298
Eco47I GGWCC 1 cut(s) 213
Eco53kI GAGCTC 1 cut(s) 422
Eco81I CCTNAGG 1 cut(s) 931
Eco88I CYCGRG 1 cut(s) 237
Eco91I GGTNACC 1 cut(s) 1421
EcoICRI GAGCTC 1 cut(s) 422
EcoO65I GGTNACC 1 cut(s) 1421
EcoRII CCWGG 4 cut(s) 718, 775, 835, 1307
EcoT14I CCWWGG 1 cut(s) 1212
EcoT38I GRGCYC 2 cut(s) 277, 424
EgeI GGCGCC 1 cut(s) 433
EheI GGCGCC 1 cut(s) 433
ErhI CCWWGG 1 cut(s) 1212
FaqI GGGAC 4 cut(s) 226, 298, 506, 1034
FauI CCCGC 4 cut(s) 130, 161, 510, 1220
FbaI TGATCA 1 cut(s) 9
FblI GTMKAC 1 cut(s) 781
FokI GGATG 4 cut(s) 484, 889, 1379, 1573
FriOI GRGCYC 2 cut(s) 277, 424
FspBI CTAG 1 cut(s) 1675
FspI TGCGCA 1 cut(s) 587
GlaI GCGC 6 cut(s) 309, 372, 380, 433, 546, 587
HaeII RGCGCY 2 cut(s) 311, 435
HaeIII GGCC 4 cut(s) 101, 236, 470, 888
HapII CCGG 6 cut(s) 210, 238, 282, 435, 471, 629
HgaI GACGC 5 cut(s) 181, 209, 374, 666, 1394
HhaI GCGC 6 cut(s) 310, 373, 381, 434, 547, 588
Hin1I GRCGYC 2 cut(s) 201, 432
Hin6I GCGC 6 cut(s) 308, 371, 379, 432, 545, 586
HinP1I GCGC 6 cut(s) 308, 371, 379, 432, 545, 586
HincII GTYRAC 1 cut(s) 753
HindII GTYRAC 1 cut(s) 753
HindIII AAGCTT 2 cut(s) 393, 1358
HinfI GANTC 5 cut(s) 494, 1137, 1260, 1268, 1549
HpaII CCGG 6 cut(s) 210, 238, 282, 435, 471, 629
HphI GGTGA 4 cut(s) 106, 743, 1433, 1484
Hpy166II GTNNAC 3 cut(s) 457, 753, 782
Hpy188I TCNGA 9 cut(s) 246, 253, 324, 414, 769, 1117, 1180, 1410, 1599
Hpy188III TCNNGA 6 cut(s) 13, 399, 920, 1275, 1440, 1553
Hpy8I GTNNAC 3 cut(s) 457, 753, 782
Hpy99I CGWCG 9 cut(s) 37, 80, 145, 175, 272, 365, 368, 682, 1410
HpyAV CCTTC 7 cut(s) 173, 468, 688, 736, 899, 1368, 1539
HpyCH4III ACNGT 3 cut(s) 773, 824, 1658
HpyCH4IV ACGT 2 cut(s) 32, 287
HpyF10VI GCNNNNNNNGC 9 cut(s) 80, 142, 305, 365, 444, 476, 1337, 1346, 1349
HpyF3I CTNAG 9 cut(s) 132, 423, 649, 869, 931, 1089, 1177, 1334, 1664
HpySE526I ACGT 2 cut(s) 32, 287
Hsp92I GRCGYC 2 cut(s) 201, 432
HspAI GCGC 6 cut(s) 308, 371, 379, 432, 545, 586
KasI GGCGCC 1 cut(s) 431
KroI GCCGGC 2 cut(s) 434, 628
KroNI GCCGGC 2 cut(s) 436, 630
Ksp22I TGATCA 1 cut(s) 9
LmnI GCTCC 6 cut(s) 141, 272, 356, 414, 838, 922
LweI GCATC 3 cut(s) 583, 911, 1198
MabI ACCWGGT 1 cut(s) 1307
MaeI CTAG 1 cut(s) 1675
MaeII ACGT 2 cut(s) 32, 287
MaeIII GTNAC 2 cut(s) 791, 1421
MboII GAAGA 5 cut(s) 497, 1106, 1217, 1269, 1455
MfeI CAATTG 1 cut(s) 564
MflI RGATCY 6 cut(s) 246, 841, 1153, 1180, 1432, 1671
MhlI GDGCHC 2 cut(s) 277, 424
MluCI AATT 6 cut(s) 350, 564, 723, 1141, 1299, 1559
Mly113I GGCGCC 1 cut(s) 432
MlyI GAGTC 3 cut(s) 488, 1269, 1543
MmeI TCCRAC 1 cut(s) 1388
MroNI GCCGGC 2 cut(s) 434, 628
MseI TTAA 7 cut(s) 726, 939, 1145, 1163, 1485, 1533, 1617
MslI CAYNNNNRTG 2 cut(s) 1276, 1591
MspA1I CMGCKG 4 cut(s) 232, 884, 1022, 1346
MspCI CTTAAG 1 cut(s) 1616
MspI CCGG 6 cut(s) 210, 238, 282, 435, 471, 629
MspR9I CCNGG 8 cut(s) 211, 238, 239, 283, 720, 777, 837, 1309
MunI CAATTG 1 cut(s) 564
Mva1269I GAATGC 3 cut(s) 679, 1196, 1231
MvaI CCWGG 4 cut(s) 720, 777, 837, 1309
MvnI CGCG 1 cut(s) 547
MwoI GCNNNNNNNGC 9 cut(s) 80, 142, 305, 365, 444, 476, 1337, 1346, 1349
NaeI GCCGGC 2 cut(s) 436, 630
NarI GGCGCC 1 cut(s) 432
NciI CCSGG 4 cut(s) 211, 238, 239, 283
NcoI CCATGG 1 cut(s) 1212
NgoMIV GCCGGC 2 cut(s) 434, 628
NlaIV GGNNCC 8 cut(s) 214, 274, 358, 433, 1155, 1320, 1434, 1541
NmuCI GTSAC 2 cut(s) 791, 1421
NsbI TGCGCA 1 cut(s) 587
NspI RCATGY 1 cut(s) 463
PagI TCATGA 1 cut(s) 12
PciI ACATGT 1 cut(s) 459
PcsI WCGNNNNNNNCGW 1 cut(s) 677
PctI GAATGC 3 cut(s) 679, 1196, 1231
PdiI GCCGGC 2 cut(s) 436, 630
PfeI GAWTC 2 cut(s) 1137, 1268
PflFI GACNNNGTC 1 cut(s) 1309
PflMI CCANNNNNTGG 1 cut(s) 1072
PleI GAGTC 3 cut(s) 488, 1268, 1543
PluTI GGCGCC 1 cut(s) 435
PpsI GAGTC 3 cut(s) 488, 1268, 1543
PscI ACATGT 1 cut(s) 459
PshBI ATTAAT 2 cut(s) 726, 1485
Psp124BI GAGCTC 1 cut(s) 424
Psp6I CCWGG 4 cut(s) 718, 775, 835, 1307
PspEI GGTNACC 1 cut(s) 1421
PspGI CCWGG 4 cut(s) 718, 775, 835, 1307
PspN4I GGNNCC 8 cut(s) 214, 274, 358, 433, 1155, 1320, 1434, 1541
PspPI GGNCC 3 cut(s) 213, 235, 468
PstI CTGCAG 2 cut(s) 1345, 1351
PstNI CAGNNNCTG 3 cut(s) 836, 1022, 1597
PsuI RGATCY 6 cut(s) 246, 841, 1153, 1180, 1432, 1671
PsyI GACNNNGTC 1 cut(s) 1309
PvuII CAGCTG 3 cut(s) 232, 1022, 1346
RsaI GTAC 5 cut(s) 464, 812, 1131, 1282, 1610
RsaNI GTAC 5 cut(s) 463, 811, 1130, 1281, 1609
RseI CAYNNNNRTG 2 cut(s) 1276, 1591
SacI GAGCTC 1 cut(s) 424
SaqAI TTAA 7 cut(s) 726, 939, 1145, 1163, 1485, 1533, 1617
Sau96I GGNCC 3 cut(s) 213, 235, 468
SchI GAGTC 3 cut(s) 488, 1269, 1543
ScrFI CCNGG 8 cut(s) 211, 238, 239, 283, 720, 777, 837, 1309
SduI GDGCHC 2 cut(s) 277, 424
SexAI ACCWGGT 1 cut(s) 1307
SfaNI GCATC 3 cut(s) 583, 911, 1198
SfcI CTRYAG 2 cut(s) 1341, 1347
SfoI GGCGCC 1 cut(s) 433
SinI GGWCC 1 cut(s) 213
SmaI CCCGGG 1 cut(s) 239
SmiI ATTTAAAT 1 cut(s) 1146
SmiMI CAYNNNNRTG 2 cut(s) 1276, 1591
SmlI CTYRAG 2 cut(s) 1361, 1616
SmoI CTYRAG 2 cut(s) 1361, 1616
Sse9I AATT 6 cut(s) 350, 564, 723, 1141, 1299, 1559
SspDI GGCGCC 1 cut(s) 431
SspMI CTAG 1 cut(s) 1675
SstI GAGCTC 1 cut(s) 424
StyD4I CCNGG 8 cut(s) 209, 236, 237, 281, 718, 775, 835, 1307
StyI CCWWGG 1 cut(s) 1212
SwaI ATTTAAAT 1 cut(s) 1146
TaaI ACNGT 3 cut(s) 773, 824, 1658
TaiI ACGT 2 cut(s) 35, 290
TaqI TCGA 4 cut(s) 177, 348, 1135, 1372
TasI AATT 6 cut(s) 350, 564, 723, 1141, 1299, 1559
TatI WGTACW 1 cut(s) 462
TauI GCSGC 6 cut(s) 83, 206, 209, 341, 387, 545
TfiI GAWTC 2 cut(s) 1137, 1268
Tru1I TTAA 7 cut(s) 726, 939, 1145, 1163, 1485, 1533, 1617
Tru9I TTAA 7 cut(s) 726, 939, 1145, 1163, 1485, 1533, 1617
TscAI CASTG 5 cut(s) 657, 829, 1359, 1518, 1598
TseFI GTSAC 2 cut(s) 791, 1421
Tsp45I GTSAC 2 cut(s) 791, 1421
TspDTI ATGAA 4 cut(s) 651, 1224, 1373, 1533
TspGWI ACGGA 2 cut(s) 285, 1494
TspMI CCCGGG 1 cut(s) 237
TspRI CASTG 5 cut(s) 657, 829, 1359, 1518, 1598
Tth111I GACNNNGTC 1 cut(s) 1309
Van91I CCANNNNNTGG 1 cut(s) 1072
Vha464I CTTAAG 1 cut(s) 1616
VpaK11BI GGWCC 1 cut(s) 213
VspI ATTAAT 2 cut(s) 726, 1485
XapI RAATTY 1 cut(s) 1559
XceI RCATGY 1 cut(s) 463
XcmI CCANNNNNNNNNTGG 2 cut(s) 881, 1598
XmaI CCCGGG 1 cut(s) 237
XmiI GTMKAC 1 cut(s) 781
XspI CTAG 1 cut(s) 1675
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.