Rorug04G0370900

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0008096
Physical Location & Seq
Forward (+)
54221855 .. 54226531
4677 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0370900.1

Sequence Viewer

Length: 2082 bp
ATGATACCTCCGGAGCAGGAAAACACCATGACAAACACTACTCCAACTAACAAGTCTAGCATACTCTCTAATGTAAGCAGGTCTGAGAATTATCAGACCGGCTGGGTTCATGCCGAACCGTCTGCTGGAACTACTAACGGAAGCCCGCGTCTGGCACCTGATGACATGCCGGAACAACCACGTCCGAGTACCCCTCATAGAGCTTCCGTCTTGCGCGAGTCCCTGCGCCCTGTGACACTTAAGTTCGAAGACGTCACCTACAGCATTAAGCTGGAGCCGACAAAGGGTAGTTGCGTCAGTTCATATAATGAGCCAAAGCAAACACGAAATCTACTGAATGGGGTGAGTGGGATTGTGCGACCGGGGGAGCTCCTCGCAATGCTGGGGCCCTCCGGCAGCGGCAAGACCACTCTCTTGACGGCACTCGGCGGCCGCTTGCCGGGAAAAATCTCCGGCAAAGTGACCTACAATGGCCAGCATTTCTCAAGCTCCATGAAGCACAACACCGGCTTTGTGACACAAGATGATGTTCTATATCCTCATCTGACTGTGCTCGAAACCCTAACATTTACCGCCCTTTTGAGGCTTCCAAAGCAGCTGAGCAAGGAAGAGAAAAAAGAGCAGGCCGAGATGGTTATGGTGGAGCTCGGGTTGACCCGGTGCCGTGACAGTGTTATTGGCGGGCCTTTGCTGCGTGGGGTATCGGGTGGGGAGAGGAAACGGGTCAGTATCGGGCAGGAGATGCTGGTGAACCCAAGTCTTTTGTTGCTGGACGAGCCTACCTCGGGGCTCGACTCTACCACGGCGCAGCGTATAGTTGCTACGCTGCGCCTACTGGCGAGAGGTGGGAGGACAGTGATCACCACCATCCACCAGCCGTCCAGCAGGTTGTATAGGATGTTTGATAAGGTGGTAGTTTTGTCGGACGGGTGCCCGATTTACAGCGGGCATGCAGGTCGGGTCATGGAGTATTTCGGGTCCGTTGGGTATGAGGTCGGGTTCAATTTCATCAACCCGGCTGATTTCTTGCTTGATCTTGCTAATGGTATAGCACCTGATGCTAAACAAGATGATCAACTAGAGTATAATGGCAGATTAGATCATCACGAAGAACAAAACACAACTAAGCAGTTTCTGATATCATCATATAAAAAGAACCTATACCCTGCATTGAAGGCAGAGATTCAGCAAAGTCAAAAAGACCCAGCTGTTCTTTCTTCTTCTTCTTCAAGAACATCATCATCCAGAGGTAGTCGAGATTACGAATGGACTACCAGCTGGTGGGAGCAATTCAAGGTTTTGCTTCTGAGGGGTTTGAAAGAGAGAAAGCATGAATCTTTCTCAGGTTTAAGGATATTCCAAGTTATGTCGGTTGCAATTCTCTCAGGCCTTTGTTGGTGGCACTCAGACACTTCACATTTGCAAGATCAGGTTGGACTTCTCTTTTTCTTCTCCATATTCTGGGGCTTCTTCCCACTGTTCAATGCCATATTTGCCTTCCCTATGGAACGACCAATGCTAAGAAAGGAACGTTCCTCTGGCATGTATCGTCTCTCTTCCTATTACTTTGCCAGAACCGTGGGTGATTTGCCAATGGAGCTTGTGCTTCCCACTGTGTTTGTGACGGTTGCTTATTGGATGGGCGGTCTCAAGCCTTCACTAGTCACATATGGACTAACCCTCTTCATAGTTCTTTACAATGTGCTAGTCTCACAAGGCCTTGGACTAGCACTAGGTGCAATTCTAATGGATGTGAAACAGGGGACAACTCTGGCTTCAGTGACCATGTTGGTGTTTTTACTAGTAGGAGGATACTACATTCTGCACATTCCAGGTTTCATAGCTTGGTTGAAGTATATTTCTTTCAGTCATTACTGTTATAAGCTTCTTCTGGGAGTTCAATACTCGGTGAATGAAGTTTATGAGTGTGATCTGGGGGTGCGTTGCAGGGTACTTGACTATCCTGCTGTTAAGTTTGTGGGTCTTGATGGTTTGTGGTCTGATGTTGCTGCTTTGGGTGTAATGCTGGTGGGTTATAGGGTTCTGGCTTATGTCGCTTTGAGGATGGGGCAACCTCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

693

Amino Acids

77.07

Weight (kDa)

8.87

Isoelectric Point (pI)

35.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 112 - 262 1.4e-28 ABC transporter
ABC2_membrane_7 PF19055 291 - 355 1.2e-09 ABC-2 type transporter
ABC2_membrane PF01061 429 - 635 8.5e-43 ABC-2 type transporter
ABC2_membrane_3 PF12698 480 - 684 1.8e-08 ABC-2 family transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1881
AatII GACGTC 1 cut(s) 255
Acc36I ACCTGC 3 cut(s) 69, 876, 944
AccB1I GGYRCC 3 cut(s) 154, 660, 930
AccB7I CCANNNNNTGG 2 cut(s) 1281, 1461
AccII CGCG 2 cut(s) 148, 216
AccIII TCCGGA 1 cut(s) 10
AciI CCGC 8 cut(s) 146, 399, 429, 433, 573, 681, 945, 1644
AclI AACGTT 1 cut(s) 1531
AcoI YGGCCR 2 cut(s) 430, 472
AcuI CTGAAG 1 cut(s) 1761
AcyI GRCGYC 1 cut(s) 252
AdeI CACNNNGTG 1 cut(s) 1736
AfaI GTAC 2 cut(s) 190, 1953
AfiI CCNNNNNNNGG 8 cut(s) 125, 151, 284, 439, 582, 785, 1281, 1461
AflII CTTAAG 1 cut(s) 239
AgsI TTSAA 8 cut(s) 1003, 1174, 1230, 1294, 1318, 1483, 1852, 1901
AhlI ACTAGT 2 cut(s) 1660, 1801
AjiI CACGTC 1 cut(s) 182
AjnI CCWGG 1 cut(s) 1831
Alw21I GWGCWC 3 cut(s) 372, 555, 648
Alw26I GTCTC 3 cut(s) 1556, 1652, 1714
AlwNI CAGNNNCTG 1 cut(s) 1135
Ama87I CYCGRG 2 cut(s) 647, 784
Aor13HI TCCGGA 1 cut(s) 10
AoxI GGCC 7 cut(s) 386, 430, 472, 624, 683, 1387, 1717
ApaI GGGCCC 1 cut(s) 390
ApeKI GCWGC 6 cut(s) 396, 595, 691, 808, 826, 2009
AspLEI GCGC 4 cut(s) 216, 228, 808, 831
AspS9I GGNCC 4 cut(s) 386, 387, 683, 978
AsuC2I CCSGG 4 cut(s) 363, 441, 658, 1016
AsuHPI GGTGA 6 cut(s) 247, 355, 760, 853, 1595, 1921
AsuII TTCGAA 1 cut(s) 246
AvaI CYCGRG 2 cut(s) 647, 784
AvaII GGWCC 1 cut(s) 978
BaeGI GKGCMC 2 cut(s) 390, 935
BalI TGGCCA 1 cut(s) 474
BanI GGYRCC 3 cut(s) 154, 660, 930
BanII GRGCYC 4 cut(s) 372, 390, 648, 792
BbsI GAAGAC 1 cut(s) 255
Bbv12I GWGCWC 3 cut(s) 372, 555, 648
BbvI GCAGC 6 cut(s) 408, 607, 678, 813, 820, 1996
BccI CCATC 5 cut(s) 625, 875, 1633, 1982, 2059
BceAI ACGGC 4 cut(s) 435, 648, 819, 862
BcgI CGANNNNNNTGC 4 cut(s) 104, 138, 938, 972
BciT130I CCWGG 1 cut(s) 1833
BciVI GTATCC 1 cut(s) 1805
BclI TGATCA 2 cut(s) 858, 1072
BcnI CCSGG 4 cut(s) 363, 441, 658, 1016
BcoDI GTCTC 3 cut(s) 1556, 1652, 1714
BcuI ACTAGT 2 cut(s) 1660, 1801
BfaI CTAG 7 cut(s) 57, 1079, 1661, 1706, 1727, 1733, 1802
BfmI CTRYAG 1 cut(s) 259
BfrI CTTAAG 1 cut(s) 239
BfuAI ACCTGC 3 cut(s) 69, 876, 944
BfuI GTATCC 1 cut(s) 1805
BisI GCNGC 9 cut(s) 397, 400, 430, 433, 596, 692, 809, 827, 2010
BlpI GCTNAGC 1 cut(s) 599
BlsI GCNGC 9 cut(s) 398, 401, 431, 434, 597, 693, 810, 828, 2011
Bme1390I CCNGG 5 cut(s) 363, 441, 658, 1016, 1833
Bme18I GGWCC 1 cut(s) 978
BmeT110I CYCGRG 2 cut(s) 647, 784
BmgBI CACGTC 1 cut(s) 182
BmgT120I GGNCC 4 cut(s) 386, 387, 683, 978
BmiI GGNNCC 7 cut(s) 156, 276, 387, 388, 662, 932, 979
BmrFI CCNGG 5 cut(s) 363, 441, 658, 1016, 1833
BmsI GCATC 2 cut(s) 732, 1048
BpiI GAAGAC 1 cut(s) 255
BplI GAGNNNNNCTC 4 cut(s) 178, 210, 767, 799
BpmI CTGGAG 1 cut(s) 293
Bpu1102I GCTNAGC 1 cut(s) 599
Bpu14I TTCGAA 1 cut(s) 246
BpuEI CTTGAG 2 cut(s) 469, 1634
BpuMI CCSGG 4 cut(s) 363, 441, 658, 1016
BsaHI GRCGYC 1 cut(s) 252
BsaI GGTCTC 1 cut(s) 1652
BsaJI CCNNGG 5 cut(s) 362, 783, 801, 1578, 1720
BsaWI WCCGGW 1 cut(s) 10
BsaXI ACNNNNNCTCC 2 cut(s) 635, 665
Bsc4I CCNNNNNNNGG 8 cut(s) 125, 151, 284, 439, 582, 785, 1281, 1461
Bse118I RCCGGY 2 cut(s) 98, 506
Bse1I ACTGG 1 cut(s) 840
Bse3DI GCAATG 1 cut(s) 384
BseAI TCCGGA 1 cut(s) 10
BseBI CCWGG 1 cut(s) 1833
BseDI CCNNGG 5 cut(s) 362, 783, 801, 1578, 1720
BseGI GGATG 6 cut(s) 867, 903, 1241, 1644, 1756, 2070
BseLI CCNNNNNNNGG 8 cut(s) 125, 151, 284, 439, 582, 785, 1281, 1461
BseMI GCAATG 1 cut(s) 384
BseMII CTCAG 6 cut(s) 75, 590, 1298, 1356, 1398, 1419
BseNI ACTGG 1 cut(s) 840
BseRI GAGGAG 1 cut(s) 362
BseSI GKGCMC 2 cut(s) 390, 935
BseX3I CGGCCG 1 cut(s) 430
BseXI GCAGC 6 cut(s) 408, 607, 678, 813, 820, 1996
BseYI CCCAGC 3 cut(s) 102, 382, 1204
BsgI GTGCAG 1 cut(s) 1808
Bsh1236I CGCG 2 cut(s) 148, 216
Bsh1285I CGRYCG 2 cut(s) 362, 433
BshFI GGCC 7 cut(s) 388, 432, 474, 626, 685, 1389, 1719
BshNI GGYRCC 3 cut(s) 154, 660, 930
BsiEI CGRYCG 2 cut(s) 362, 433
BsiHKAI GWGCWC 3 cut(s) 372, 555, 648
BsiHKCI CYCGRG 2 cut(s) 647, 784
BslFI GGGAC 2 cut(s) 205, 1777
BslI CCNNNNNNNGG 8 cut(s) 125, 151, 284, 439, 582, 785, 1281, 1461
BsmAI GTCTC 3 cut(s) 1556, 1652, 1714
BsmBI CGTCTC 1 cut(s) 1556
BsmFI GGGAC 2 cut(s) 205, 1777
BsnI GGCC 7 cut(s) 388, 432, 474, 626, 685, 1389, 1719
Bso31I GGTCTC 1 cut(s) 1652
BsoBI CYCGRG 2 cut(s) 647, 784
Bsp119I TTCGAA 1 cut(s) 246
Bsp120I GGGCCC 1 cut(s) 386
Bsp1286I GDGCHC 6 cut(s) 372, 390, 555, 648, 792, 935
Bsp13I TCCGGA 1 cut(s) 10
Bsp143I GATC 6 cut(s) 858, 1033, 1072, 1099, 1426, 1930
Bsp1720I GCTNAGC 1 cut(s) 599
BspACI CCGC 8 cut(s) 146, 399, 429, 433, 573, 681, 945, 1644
BspANI GGCC 7 cut(s) 388, 432, 474, 626, 685, 1389, 1719
BspCNI CTCAG 6 cut(s) 76, 591, 1299, 1355, 1397, 1418
BspEI TCCGGA 1 cut(s) 10
BspFNI CGCG 2 cut(s) 148, 216
BspLI GGNNCC 7 cut(s) 156, 276, 387, 388, 662, 932, 979
BspMI ACCTGC 3 cut(s) 69, 876, 944
BspT104I TTCGAA 1 cut(s) 246
BspT107I GGYRCC 3 cut(s) 154, 660, 930
BspTI CTTAAG 1 cut(s) 239
BspTNI GGTCTC 1 cut(s) 1652
BsrDI GCAATG 1 cut(s) 384
BsrFI RCCGGY 2 cut(s) 98, 506
BsrI ACTGG 1 cut(s) 840
BssAI RCCGGY 2 cut(s) 98, 506
BssECI CCNNGG 5 cut(s) 362, 783, 801, 1578, 1720
BssMI GATC 6 cut(s) 858, 1033, 1072, 1099, 1426, 1930
BssNI GRCGYC 1 cut(s) 252
BssT1I CCWWGG 1 cut(s) 1720
Bst2UI CCWGG 1 cut(s) 1833
Bst4CI ACNGT 9 cut(s) 120, 550, 671, 856, 1479, 1579, 1615, 1627, 1877
Bst6I CTCTTC 3 cut(s) 603, 1561, 1688
BstACI GRCGYC 1 cut(s) 252
BstAFI CTTAAG 1 cut(s) 239
BstAPI GCANNNNNTGC 3 cut(s) 742, 1058, 1736
BstBI TTCGAA 1 cut(s) 246
BstC8I GCNNGC 7 cut(s) 146, 437, 476, 624, 683, 947, 951
BstDEI CTNAG 8 cut(s) 84, 599, 1125, 1307, 1342, 1384, 1405, 1520
BstDSI CCRYGG 2 cut(s) 801, 1578
BstF5I GGATG 6 cut(s) 867, 903, 1241, 1644, 1756, 2070
BstFNI CGCG 2 cut(s) 148, 216
BstHHI GCGC 4 cut(s) 216, 228, 808, 831
BstKTI GATC 6 cut(s) 861, 1036, 1075, 1102, 1429, 1933
BstMAI GTCTC 3 cut(s) 1556, 1652, 1714
BstMBI GATC 6 cut(s) 858, 1033, 1072, 1099, 1426, 1930
BstMCI CGRYCG 2 cut(s) 362, 433
BstNI CCWGG 1 cut(s) 1833
BstNSI RCATGY 3 cut(s) 169, 953, 1546
BstSCI CCNGG 5 cut(s) 361, 439, 656, 1014, 1831
BstSFI CTRYAG 1 cut(s) 259
BstSLI GKGCMC 2 cut(s) 390, 935
BstUI CGCG 2 cut(s) 148, 216
BstV1I GCAGC 6 cut(s) 408, 607, 678, 813, 820, 1996
BstV2I GAAGAC 1 cut(s) 255
BstXI CCANNNNNNTGG 1 cut(s) 1579
BstZI CGGCCG 1 cut(s) 430
BsuI GTATCC 1 cut(s) 1805
BsuRI GGCC 7 cut(s) 388, 432, 474, 626, 685, 1389, 1719
BtgI CCRYGG 2 cut(s) 801, 1578
BtrI CACGTC 1 cut(s) 182
BtsCI GGATG 6 cut(s) 867, 903, 1241, 1644, 1756, 2070
BtsIMutI CAGTG 6 cut(s) 676, 861, 1475, 1611, 1785, 2077
BveI ACCTGC 3 cut(s) 69, 876, 944
Cac8I GCNNGC 7 cut(s) 146, 437, 476, 624, 683, 947, 951
CaiI CAGNNNCTG 1 cut(s) 1135
CciNI GCGGCCGC 1 cut(s) 430
CfoI GCGC 4 cut(s) 216, 228, 808, 831
Cfr10I RCCGGY 2 cut(s) 98, 506
Cfr13I GGNCC 4 cut(s) 386, 387, 683, 978
CseI GACGC 2 cut(s) 137, 283
Csp6I GTAC 2 cut(s) 189, 1952
CspCI CAANNNNNGTGG 2 cut(s) 1600, 1635
CviAII CATG 9 cut(s) 28, 110, 166, 493, 950, 964, 1331, 1543, 1786
CviQI GTAC 2 cut(s) 189, 1952
DdeI CTNAG 8 cut(s) 84, 599, 1125, 1307, 1342, 1384, 1405, 1520
DpnI GATC 6 cut(s) 860, 1035, 1074, 1101, 1428, 1932
DpnII GATC 6 cut(s) 858, 1033, 1072, 1099, 1426, 1930
DraIII CACNNNGTG 1 cut(s) 1736
EaeI YGGCCR 2 cut(s) 430, 472
EagI CGGCCG 1 cut(s) 430
Eam1104I CTCTTC 3 cut(s) 603, 1561, 1688
EarI CTCTTC 3 cut(s) 603, 1561, 1688
Ecl136II GAGCTC 2 cut(s) 370, 646
EclXI CGGCCG 1 cut(s) 430
Eco130I CCWWGG 1 cut(s) 1720
Eco147I AGGCCT 2 cut(s) 1389, 1719
Eco24I GRGCYC 4 cut(s) 372, 390, 648, 792
Eco31I GGTCTC 1 cut(s) 1652
Eco32I GATATC 1 cut(s) 1140
Eco47I GGWCC 1 cut(s) 978
Eco52I CGGCCG 1 cut(s) 430
Eco53kI GAGCTC 2 cut(s) 370, 646
Eco57I CTGAAG 1 cut(s) 1761
Eco88I CYCGRG 2 cut(s) 647, 784
EcoICRI GAGCTC 2 cut(s) 370, 646
EcoO109I RGGNCCY 2 cut(s) 386, 387
EcoRII CCWGG 1 cut(s) 1831
EcoRV GATATC 1 cut(s) 1140
EcoT14I CCWWGG 1 cut(s) 1720
EcoT38I GRGCYC 4 cut(s) 372, 390, 648, 792
ErhI CCWWGG 1 cut(s) 1720
Esp3I CGTCTC 1 cut(s) 1556
FaeI CATG 9 cut(s) 31, 113, 169, 496, 953, 967, 1334, 1546, 1789
FaqI GGGAC 2 cut(s) 205, 1777
FatI CATG 9 cut(s) 27, 109, 165, 492, 949, 963, 1330, 1542, 1785
FauI CCCGC 3 cut(s) 153, 674, 938
FauNDI CATATG 1 cut(s) 1669
FbaI TGATCA 2 cut(s) 858, 1072
Fnu4HI GCNGC 9 cut(s) 397, 400, 430, 433, 596, 692, 809, 827, 2010
FokI GGATG 6 cut(s) 854, 910, 1228, 1651, 1763, 2077
FriOI GRGCYC 4 cut(s) 372, 390, 648, 792
Fsp4HI GCNGC 9 cut(s) 397, 400, 430, 433, 596, 692, 809, 827, 2010
FspBI CTAG 7 cut(s) 57, 1079, 1661, 1706, 1727, 1733, 1802
GlaI GCGC 4 cut(s) 215, 227, 807, 830
GluI GCNGC 9 cut(s) 397, 400, 430, 433, 596, 692, 809, 827, 2010
GsaI CCCAGC 3 cut(s) 106, 386, 1208
GsuI CTGGAG 1 cut(s) 293
HaeIII GGCC 7 cut(s) 388, 432, 474, 626, 685, 1389, 1719
HgaI GACGC 2 cut(s) 137, 283
HhaI GCGC 4 cut(s) 216, 228, 808, 831
Hin1I GRCGYC 1 cut(s) 252
Hin1II CATG 9 cut(s) 31, 113, 169, 496, 953, 967, 1334, 1546, 1789
Hin6I GCGC 4 cut(s) 214, 226, 806, 829
HinP1I GCGC 4 cut(s) 214, 226, 806, 829
HincII GTYRAC 1 cut(s) 654
HindII GTYRAC 1 cut(s) 654
HindIII AAGCTT 1 cut(s) 1883
HinfI GANTC 4 cut(s) 218, 794, 1183, 1334
HphI GGTGA 6 cut(s) 247, 355, 760, 853, 1595, 1921
Hpy166II GTNNAC 2 cut(s) 654, 751
Hpy188I TCNGA 9 cut(s) 85, 96, 186, 546, 925, 1137, 1308, 1408, 2002
Hpy188III TCNNGA 7 cut(s) 11, 415, 1106, 1230, 1245, 1256, 1985
Hpy8I GTNNAC 2 cut(s) 654, 751
HpyAV CCTTC 3 cut(s) 1168, 1507, 1665
HpyCH4III ACNGT 9 cut(s) 120, 550, 671, 856, 1479, 1579, 1615, 1627, 1877
HpyCH4IV ACGT 3 cut(s) 181, 252, 1531
HpyCH4V TGCA 7 cut(s) 953, 1169, 1376, 1423, 1739, 1825, 1947
HpyF3I CTNAG 8 cut(s) 84, 599, 1125, 1307, 1342, 1384, 1405, 1520
HpySE526I ACGT 3 cut(s) 181, 252, 1531
Hsp92I GRCGYC 1 cut(s) 252
Hsp92II CATG 9 cut(s) 31, 113, 169, 496, 953, 967, 1334, 1546, 1789
HspAI GCGC 4 cut(s) 214, 226, 806, 829
Kpn2I TCCGGA 1 cut(s) 10
Ksp22I TGATCA 2 cut(s) 858, 1072
Kzo9I GATC 6 cut(s) 858, 1033, 1072, 1099, 1426, 1930
LmnI GCTCC 8 cut(s) 13, 274, 367, 375, 494, 643, 1285, 1597
Lsp1109I GCAGC 6 cut(s) 408, 607, 678, 813, 820, 1996
LweI GCATC 2 cut(s) 732, 1048
MaeI CTAG 7 cut(s) 57, 1079, 1661, 1706, 1727, 1733, 1802
MaeII ACGT 3 cut(s) 181, 252, 1531
MaeIII GTNAC 8 cut(s) 232, 253, 460, 514, 665, 1621, 1663, 1780
MalI GATC 6 cut(s) 860, 1035, 1074, 1101, 1428, 1932
MboI GATC 6 cut(s) 858, 1033, 1072, 1099, 1426, 1930
MhlI GDGCHC 6 cut(s) 372, 390, 555, 648, 792, 935
MlsI TGGCCA 1 cut(s) 474
MluCI AATT 5 cut(s) 88, 1003, 1289, 1377, 1740
MluNI TGGCCA 1 cut(s) 474
MlyI GAGTC 2 cut(s) 227, 788
MmeI TCCRAC 3 cut(s) 68, 903, 1414
Mox20I TGGCCA 1 cut(s) 474
MroI TCCGGA 1 cut(s) 10
MscI TGGCCA 1 cut(s) 474
MseI TTAA 4 cut(s) 240, 267, 1349, 1971
MslI CAYNNNNRTG 1 cut(s) 1790
Msp20I TGGCCA 1 cut(s) 474
MspA1I CMGCKG 5 cut(s) 399, 598, 945, 1208, 1278
MspCI CTTAAG 1 cut(s) 239
MspR9I CCNGG 5 cut(s) 363, 441, 658, 1016, 1833
MvaI CCWGG 1 cut(s) 1833
MvnI CGCG 2 cut(s) 148, 216
NciI CCSGG 4 cut(s) 363, 441, 658, 1016
NdeI CATATG 1 cut(s) 1669
NdeII GATC 6 cut(s) 858, 1033, 1072, 1099, 1426, 1930
NlaIII CATG 9 cut(s) 31, 113, 169, 496, 953, 967, 1334, 1546, 1789
NlaIV GGNNCC 7 cut(s) 156, 276, 387, 388, 662, 932, 979
NmeAIII GCCGAG 2 cut(s) 405, 652
NmuCI GTSAC 8 cut(s) 232, 253, 460, 514, 665, 1621, 1663, 1780
NotI GCGGCCGC 1 cut(s) 430
NspI RCATGY 3 cut(s) 169, 953, 1546
NspV TTCGAA 1 cut(s) 246
PaeI GCATGC 1 cut(s) 953
PceI AGGCCT 2 cut(s) 1389, 1719
PfeI GAWTC 2 cut(s) 1183, 1334
PflMI CCANNNNNTGG 2 cut(s) 1281, 1461
PkrI GCNGC 9 cut(s) 398, 401, 431, 434, 597, 693, 810, 828, 2011
PleI GAGTC 2 cut(s) 226, 788
PpsI GAGTC 2 cut(s) 226, 788
PsiI TTATAA 1 cut(s) 1881
Psp124BI GAGCTC 2 cut(s) 372, 648
Psp1406I AACGTT 1 cut(s) 1531
Psp6I CCWGG 1 cut(s) 1831
PspFI CCCAGC 3 cut(s) 102, 382, 1204
PspGI CCWGG 1 cut(s) 1831
PspN4I GGNNCC 7 cut(s) 156, 276, 387, 388, 662, 932, 979
PspOMI GGGCCC 1 cut(s) 386
PspPI GGNCC 4 cut(s) 386, 387, 683, 978
PstNI CAGNNNCTG 1 cut(s) 1135
PvuII CAGCTG 3 cut(s) 598, 1208, 1278
RsaI GTAC 2 cut(s) 190, 1953
RsaNI GTAC 2 cut(s) 189, 1952
RseI CAYNNNNRTG 1 cut(s) 1790
SacI GAGCTC 2 cut(s) 372, 648
SaqAI TTAA 4 cut(s) 240, 267, 1349, 1971
SatI GCNGC 9 cut(s) 397, 400, 430, 433, 596, 692, 809, 827, 2010
Sau3AI GATC 6 cut(s) 858, 1033, 1072, 1099, 1426, 1930
Sau96I GGNCC 4 cut(s) 386, 387, 683, 978
SchI GAGTC 2 cut(s) 227, 788
ScrFI CCNGG 5 cut(s) 363, 441, 658, 1016, 1833
SduI GDGCHC 6 cut(s) 372, 390, 555, 648, 792, 935
SfaNI GCATC 2 cut(s) 732, 1048
SfcI CTRYAG 1 cut(s) 259
SfuI TTCGAA 1 cut(s) 246
SinI GGWCC 1 cut(s) 978
SmiMI CAYNNNNRTG 1 cut(s) 1790
SmlI CTYRAG 3 cut(s) 239, 484, 1649
SmoI CTYRAG 3 cut(s) 239, 484, 1649
SpeI ACTAGT 2 cut(s) 1660, 1801
SphI GCATGC 1 cut(s) 953
Sse9I AATT 5 cut(s) 88, 1003, 1289, 1377, 1740
SseBI AGGCCT 2 cut(s) 1389, 1719
SsiI CCGC 8 cut(s) 146, 399, 429, 433, 573, 681, 945, 1644
SspMI CTAG 7 cut(s) 57, 1079, 1661, 1706, 1727, 1733, 1802
SstI GAGCTC 2 cut(s) 372, 648
StuI AGGCCT 2 cut(s) 1389, 1719
StyD4I CCNGG 5 cut(s) 361, 439, 656, 1014, 1831
StyI CCWWGG 1 cut(s) 1720
TaaI ACNGT 9 cut(s) 120, 550, 671, 856, 1479, 1579, 1615, 1627, 1877
TaiI ACGT 3 cut(s) 184, 255, 1534
TaqI TCGA 4 cut(s) 246, 555, 792, 1255
TasI AATT 5 cut(s) 88, 1003, 1289, 1377, 1740
TauI GCSGC 3 cut(s) 402, 432, 435
TfiI GAWTC 2 cut(s) 1183, 1334
Tru1I TTAA 4 cut(s) 240, 267, 1349, 1971
Tru9I TTAA 4 cut(s) 240, 267, 1349, 1971
TscAI CASTG 5 cut(s) 676, 861, 1482, 1618, 1785
TseFI GTSAC 8 cut(s) 232, 253, 460, 514, 665, 1621, 1663, 1780
TseI GCWGC 6 cut(s) 396, 595, 691, 808, 826, 2009
Tsp45I GTSAC 8 cut(s) 232, 253, 460, 514, 665, 1621, 1663, 1780
TspDTI ATGAA 8 cut(s) 98, 291, 509, 997, 1347, 1675, 1828, 1929
TspGWI ACGGA 3 cut(s) 153, 196, 970
TspRI CASTG 5 cut(s) 676, 861, 1482, 1618, 1785
Van91I CCANNNNNTGG 2 cut(s) 1281, 1461
Vha464I CTTAAG 1 cut(s) 239
VpaK11BI GGWCC 1 cut(s) 978
XceI RCATGY 3 cut(s) 169, 953, 1546
XspI CTAG 7 cut(s) 57, 1079, 1661, 1706, 1727, 1733, 1802
ZraI GACGTC 1 cut(s) 253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.