Belongs to the class-I aminoacyl-tRNA synthetase family
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD10G1160800.v1.1 |
| rosa_chinensis | RchiOBHm_Chr4g0414261 RchiOBHm_Chr4g0445731 |
| rosa_laevigata | RLG00000005712 |
| rosa_multiflora | Rmu_sc0003637.1_g000009 Rmu_sc0003637.1_g000010 |
| rosa_roxburghii | Rroxscaffold_2G00121530 |
| rosa_samantha | Rh4AG426200 Rh4CG453200 Rh4DG180400 Rh4DG181300 Rh4DG434400 |
| rosa_wichuraiana | Rw4G036500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 29 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 331, 659 |
| AccII | CGCG | 2 cut(s) | 463, 471 |
| AciI | CCGC | 5 cut(s) | 320, 461, 463, 569, 837 |
| AclI | AACGTT | 1 cut(s) | 613 |
| AclWI | GGATC | 3 cut(s) | 425, 636, 944 |
| AcsI | RAATTY | 2 cut(s) | 763, 1084 |
| AcuI | CTGAAG | 1 cut(s) | 1116 |
| AfaI | GTAC | 4 cut(s) | 84, 140, 810, 896 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 92, 93, 331, 568, 659 |
| AflIII | ACRYGT | 1 cut(s) | 684 |
| AgsI | TTSAA | 6 cut(s) | 412, 427, 575, 901, 1170, 1202 |
| AjnI | CCWGG | 2 cut(s) | 587, 1040 |
| AluBI | AGCT | 4 cut(s) | 40, 108, 289, 406 |
| AluI | AGCT | 4 cut(s) | 40, 108, 289, 406 |
| Alw21I | GWGCWC | 2 cut(s) | 122, 278 |
| Alw26I | GTCTC | 3 cut(s) | 152, 200, 375 |
| AlwI | GGATC | 3 cut(s) | 425, 636, 944 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1184 |
| Ama87I | CYCGRG | 1 cut(s) | 375 |
| AoxI | GGCC | 2 cut(s) | 1013, 1044 |
| ApeKI | GCWGC | 1 cut(s) | 286 |
| ApoI | RAATTY | 2 cut(s) | 763, 1084 |
| AspLEI | GCGC | 1 cut(s) | 993 |
| AspS9I | GGNCC | 5 cut(s) | 22, 31, 180, 322, 1044 |
| AsuC2I | CCSGG | 1 cut(s) | 152 |
| AvaI | CYCGRG | 1 cut(s) | 375 |
| AvaII | GGWCC | 4 cut(s) | 22, 31, 180, 322 |
| BaeGI | GKGCMC | 1 cut(s) | 868 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 130, 163 |
| BanII | GRGCYC | 1 cut(s) | 498 |
| Bbv12I | GWGCWC | 2 cut(s) | 122, 278 |
| BbvI | GCAGC | 1 cut(s) | 298 |
| BccI | CCATC | 1 cut(s) | 653 |
| BciT130I | CCWGG | 2 cut(s) | 589, 1042 |
| BciVI | GTATCC | 3 cut(s) | 149, 701, 1139 |
| BclI | TGATCA | 1 cut(s) | 739 |
| BcnI | CCSGG | 1 cut(s) | 152 |
| BcoDI | GTCTC | 3 cut(s) | 152, 200, 375 |
| BfoI | RGCGCY | 1 cut(s) | 994 |
| BfuI | GTATCC | 3 cut(s) | 149, 701, 1139 |
| BglII | AGATCT | 1 cut(s) | 7 |
| BisI | GCNGC | 1 cut(s) | 287 |
| BlsI | GCNGC | 1 cut(s) | 288 |
| BmcAI | AGTACT | 1 cut(s) | 896 |
| Bme1390I | CCNGG | 3 cut(s) | 152, 589, 1042 |
| Bme18I | GGWCC | 4 cut(s) | 22, 31, 180, 322 |
| BmeT110I | CYCGRG | 1 cut(s) | 375 |
| BmgT120I | GGNCC | 5 cut(s) | 22, 31, 180, 322, 1044 |
| BmiI | GGNNCC | 5 cut(s) | 33, 497, 560, 651, 850 |
| BmrFI | CCNGG | 3 cut(s) | 152, 589, 1042 |
| BmrI | ACTGGG | 1 cut(s) | 754 |
| BmsI | GCATC | 3 cut(s) | 685, 946, 1177 |
| BmuI | ACTGGG | 1 cut(s) | 754 |
| BpuEI | CTTGAG | 4 cut(s) | 136, 336, 491, 617 |
| BpuMI | CCSGG | 1 cut(s) | 152 |
| BsaAI | YACGTR | 1 cut(s) | 685 |
| BsaI | GGTCTC | 1 cut(s) | 375 |
| BsaJI | CCNNGG | 6 cut(s) | 91, 151, 215, 461, 844, 1041 |
| BsaWI | WCCGGW | 2 cut(s) | 851, 976 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 92, 93, 331, 568, 659 |
| Bse1I | ACTGG | 4 cut(s) | 57, 325, 385, 749 |
| BseBI | CCWGG | 2 cut(s) | 589, 1042 |
| BseDI | CCNNGG | 6 cut(s) | 91, 151, 215, 461, 844, 1041 |
| BseGI | GGATG | 1 cut(s) | 778 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 92, 93, 331, 568, 659 |
| BseMII | CTCAG | 1 cut(s) | 759 |
| BseNI | ACTGG | 4 cut(s) | 57, 325, 385, 749 |
| BseRI | GAGGAG | 1 cut(s) | 393 |
| BseSI | GKGCMC | 1 cut(s) | 868 |
| BseXI | GCAGC | 1 cut(s) | 298 |
| Bsh1236I | CGCG | 2 cut(s) | 463, 471 |
| BshFI | GGCC | 2 cut(s) | 1015, 1046 |
| BsiHKAI | GWGCWC | 2 cut(s) | 122, 278 |
| BsiHKCI | CYCGRG | 1 cut(s) | 375 |
| BsiSI | CCGG | 3 cut(s) | 151, 852, 977 |
| BslFI | GGGAC | 3 cut(s) | 17, 352, 683 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 92, 93, 331, 568, 659 |
| BsmAI | GTCTC | 3 cut(s) | 152, 200, 375 |
| BsmFI | GGGAC | 3 cut(s) | 17, 352, 683 |
| BsmI | GAATGC | 1 cut(s) | 972 |
| BsnI | GGCC | 2 cut(s) | 1015, 1046 |
| Bso31I | GGTCTC | 1 cut(s) | 375 |
| BsoBI | CYCGRG | 1 cut(s) | 375 |
| Bsp1286I | GDGCHC | 4 cut(s) | 122, 278, 498, 868 |
| Bsp143I | GATC | 5 cut(s) | 7, 430, 628, 739, 936 |
| Bsp68I | TCGCGA | 1 cut(s) | 471 |
| BspACI | CCGC | 5 cut(s) | 320, 461, 463, 569, 837 |
| BspANI | GGCC | 2 cut(s) | 1015, 1046 |
| BspCNI | CTCAG | 1 cut(s) | 760 |
| BspFNI | CGCG | 2 cut(s) | 463, 471 |
| BspLI | GGNNCC | 5 cut(s) | 33, 497, 560, 651, 850 |
| BspPI | GGATC | 3 cut(s) | 425, 636, 944 |
| BspTNI | GGTCTC | 1 cut(s) | 375 |
| BsrI | ACTGG | 4 cut(s) | 57, 325, 385, 749 |
| BssECI | CCNNGG | 6 cut(s) | 91, 151, 215, 461, 844, 1041 |
| BssMI | GATC | 5 cut(s) | 7, 430, 628, 739, 936 |
| BssT1I | CCWWGG | 3 cut(s) | 91, 215, 844 |
| Bst2UI | CCWGG | 2 cut(s) | 589, 1042 |
| Bst4CI | ACNGT | 3 cut(s) | 823, 1035, 1151 |
| Bst6I | CTCTTC | 1 cut(s) | 215 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 447 |
| BstBAI | YACGTR | 1 cut(s) | 685 |
| BstDEI | CTNAG | 2 cut(s) | 316, 768 |
| BstDSI | CCRYGG | 1 cut(s) | 461 |
| BstF5I | GGATG | 1 cut(s) | 778 |
| BstFNI | CGCG | 2 cut(s) | 463, 471 |
| BstH2I | RGCGCY | 1 cut(s) | 994 |
| BstHHI | GCGC | 1 cut(s) | 993 |
| BstKTI | GATC | 5 cut(s) | 10, 433, 631, 742, 939 |
| BstMAI | GTCTC | 3 cut(s) | 152, 200, 375 |
| BstMBI | GATC | 5 cut(s) | 7, 430, 628, 739, 936 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 447, 502 |
| BstNI | CCWGG | 2 cut(s) | 589, 1042 |
| BstNSI | RCATGY | 2 cut(s) | 306, 345 |
| BstSCI | CCNGG | 3 cut(s) | 150, 587, 1040 |
| BstSLI | GKGCMC | 1 cut(s) | 868 |
| BstUI | CGCG | 2 cut(s) | 463, 471 |
| BstV1I | GCAGC | 1 cut(s) | 298 |
| BstX2I | RGATCY | 3 cut(s) | 7, 430, 628 |
| BstYI | RGATCY | 3 cut(s) | 7, 430, 628 |
| BsuI | GTATCC | 3 cut(s) | 149, 701, 1139 |
| BsuRI | GGCC | 2 cut(s) | 1015, 1046 |
| BtgI | CCRYGG | 1 cut(s) | 461 |
| BtgZI | GCGATG | 1 cut(s) | 37 |
| BtsCI | GGATG | 1 cut(s) | 778 |
| BtsIMutI | CAGTG | 8 cut(s) | 64, 120, 392, 549, 742, 866, 889, 1031 |
| BtuMI | TCGCGA | 1 cut(s) | 471 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1184 |
| CfoI | GCGC | 1 cut(s) | 993 |
| Cfr13I | GGNCC | 5 cut(s) | 22, 31, 180, 322, 1044 |
| Cfr42I | CCGCGG | 1 cut(s) | 464 |
| Csp6I | GTAC | 4 cut(s) | 83, 139, 809, 895 |
| CviAII | CATG | 4 cut(s) | 303, 342, 656, 826 |
| CviQI | GTAC | 4 cut(s) | 83, 139, 809, 895 |
| DdeI | CTNAG | 2 cut(s) | 316, 768 |
| DpnI | GATC | 5 cut(s) | 9, 432, 630, 741, 938 |
| DpnII | GATC | 5 cut(s) | 7, 430, 628, 739, 936 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 29 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 29 |
| Eam1104I | CTCTTC | 1 cut(s) | 215 |
| EarI | CTCTTC | 1 cut(s) | 215 |
| Eco130I | CCWWGG | 3 cut(s) | 91, 215, 844 |
| Eco147I | AGGCCT | 1 cut(s) | 1015 |
| Eco24I | GRGCYC | 1 cut(s) | 498 |
| Eco31I | GGTCTC | 1 cut(s) | 375 |
| Eco47I | GGWCC | 4 cut(s) | 22, 31, 180, 322 |
| Eco57I | CTGAAG | 1 cut(s) | 1116 |
| Eco88I | CYCGRG | 1 cut(s) | 375 |
| EcoO109I | RGGNCCY | 1 cut(s) | 31 |
| EcoRI | GAATTC | 1 cut(s) | 763 |
| EcoRII | CCWGG | 2 cut(s) | 587, 1040 |
| EcoT14I | CCWWGG | 3 cut(s) | 91, 215, 844 |
| EcoT38I | GRGCYC | 1 cut(s) | 498 |
| ErhI | CCWWGG | 3 cut(s) | 91, 215, 844 |
| FaeI | CATG | 4 cut(s) | 306, 345, 659, 829 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 299, 331, 588, 620 |
| FaqI | GGGAC | 3 cut(s) | 17, 352, 683 |
| FatI | CATG | 4 cut(s) | 302, 341, 655, 825 |
| FauNDI | CATATG | 2 cut(s) | 70, 1174 |
| FbaI | TGATCA | 1 cut(s) | 739 |
| Fnu4HI | GCNGC | 1 cut(s) | 287 |
| FokI | GGATG | 1 cut(s) | 785 |
| FriOI | GRGCYC | 1 cut(s) | 498 |
| Fsp4HI | GCNGC | 1 cut(s) | 287 |
| GlaI | GCGC | 1 cut(s) | 992 |
| GluI | GCNGC | 1 cut(s) | 287 |
| HaeII | RGCGCY | 1 cut(s) | 994 |
| HaeIII | GGCC | 2 cut(s) | 1015, 1046 |
| HapII | CCGG | 3 cut(s) | 151, 852, 977 |
| HhaI | GCGC | 1 cut(s) | 993 |
| Hin1II | CATG | 4 cut(s) | 306, 345, 659, 829 |
| Hin6I | GCGC | 1 cut(s) | 991 |
| HinP1I | GCGC | 1 cut(s) | 991 |
| HincII | GTYRAC | 2 cut(s) | 76, 1219 |
| HindII | GTYRAC | 2 cut(s) | 76, 1219 |
| HinfI | GANTC | 6 cut(s) | 368, 412, 466, 539, 1166, 1181 |
| HpaI | GTTAAC | 1 cut(s) | 76 |
| HpaII | CCGG | 3 cut(s) | 151, 852, 977 |
| Hpy166II | GTNNAC | 4 cut(s) | 76, 401, 1038, 1219 |
| Hpy188I | TCNGA | 5 cut(s) | 417, 769, 1005, 1027, 1186 |
| Hpy188III | TCNNGA | 6 cut(s) | 115, 353, 409, 470, 737, 1163 |
| Hpy8I | GTNNAC | 4 cut(s) | 76, 401, 1038, 1219 |
| Hpy99I | CGWCG | 1 cut(s) | 205 |
| HpyAV | CCTTC | 3 cut(s) | 22, 542, 1140 |
| HpyCH4III | ACNGT | 3 cut(s) | 823, 1035, 1151 |
| HpyCH4IV | ACGT | 4 cut(s) | 81, 358, 613, 684 |
| HpyCH4V | TGCA | 7 cut(s) | 230, 306, 441, 450, 618, 959, 1178 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 447, 502 |
| HpyF3I | CTNAG | 2 cut(s) | 316, 768 |
| HpySE526I | ACGT | 4 cut(s) | 81, 358, 613, 684 |
| Hsp92II | CATG | 4 cut(s) | 306, 345, 659, 829 |
| HspAI | GCGC | 1 cut(s) | 991 |
| Ksp22I | TGATCA | 1 cut(s) | 739 |
| KspAI | GTTAAC | 1 cut(s) | 76 |
| KspI | CCGCGG | 1 cut(s) | 464 |
| Kzo9I | GATC | 5 cut(s) | 7, 430, 628, 739, 936 |
| LmnI | GCTCC | 5 cut(s) | 45, 273, 501, 558, 703 |
| Lsp1109I | GCAGC | 1 cut(s) | 298 |
| LweI | GCATC | 3 cut(s) | 685, 946, 1177 |
| MaeII | ACGT | 4 cut(s) | 81, 358, 613, 684 |
| MaeIII | GTNAC | 7 cut(s) | 247, 296, 359, 389, 728, 886, 1151 |
| MalI | GATC | 5 cut(s) | 9, 432, 630, 741, 938 |
| MboI | GATC | 5 cut(s) | 7, 430, 628, 739, 936 |
| MboII | GAAGA | 4 cut(s) | 232, 772, 886, 992 |
| MflI | RGATCY | 3 cut(s) | 7, 430, 628 |
| MhlI | GDGCHC | 4 cut(s) | 122, 278, 498, 868 |
| MluCI | AATT | 6 cut(s) | 422, 763, 779, 859, 1084, 1202 |
| MlyI | GAGTC | 2 cut(s) | 460, 1175 |
| MmeI | TCCRAC | 3 cut(s) | 440, 498, 536 |
| MseI | TTAA | 3 cut(s) | 75, 606, 1052 |
| MslI | CAYNNNNRTG | 2 cut(s) | 824, 977 |
| MspA1I | CMGCKG | 2 cut(s) | 108, 463 |
| MspI | CCGG | 3 cut(s) | 151, 852, 977 |
| MspR9I | CCNGG | 3 cut(s) | 152, 589, 1042 |
| Mva1269I | GAATGC | 1 cut(s) | 972 |
| MvaI | CCWGG | 2 cut(s) | 589, 1042 |
| MvnI | CGCG | 2 cut(s) | 463, 471 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 447, 502 |
| NciI | CCSGG | 1 cut(s) | 152 |
| NdeI | CATATG | 2 cut(s) | 70, 1174 |
| NdeII | GATC | 5 cut(s) | 7, 430, 628, 739, 936 |
| NlaIII | CATG | 4 cut(s) | 306, 345, 659, 829 |
| NlaIV | GGNNCC | 5 cut(s) | 33, 497, 560, 651, 850 |
| NmuCI | GTSAC | 5 cut(s) | 247, 296, 359, 389, 886 |
| NruI | TCGCGA | 1 cut(s) | 471 |
| NspI | RCATGY | 2 cut(s) | 306, 345 |
| PaeR7I | CTCGAG | 1 cut(s) | 375 |
| PceI | AGGCCT | 1 cut(s) | 1015 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 690 |
| PctI | GAATGC | 1 cut(s) | 972 |
| PfeI | GAWTC | 4 cut(s) | 368, 412, 539, 1166 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 331, 659 |
| PkrI | GCNGC | 1 cut(s) | 288 |
| PleI | GAGTC | 2 cut(s) | 460, 1175 |
| PpsI | GAGTC | 2 cut(s) | 460, 1175 |
| Ppu21I | YACGTR | 1 cut(s) | 685 |
| PpuMI | RGGWCCY | 1 cut(s) | 31 |
| Psp1406I | AACGTT | 1 cut(s) | 613 |
| Psp5II | RGGWCCY | 1 cut(s) | 31 |
| Psp6I | CCWGG | 2 cut(s) | 587, 1040 |
| PspGI | CCWGG | 2 cut(s) | 587, 1040 |
| PspN4I | GGNNCC | 5 cut(s) | 33, 497, 560, 651, 850 |
| PspPI | GGNCC | 5 cut(s) | 22, 31, 180, 322, 1044 |
| PspPPI | RGGWCCY | 1 cut(s) | 31 |
| PspXI | VCTCGAGB | 1 cut(s) | 375 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1184 |
| PsuI | RGATCY | 3 cut(s) | 7, 430, 628 |
| PvuII | CAGCTG | 1 cut(s) | 108 |
| RruI | TCGCGA | 1 cut(s) | 471 |
| RsaI | GTAC | 4 cut(s) | 84, 140, 810, 896 |
| RsaNI | GTAC | 4 cut(s) | 83, 139, 809, 895 |
| RseI | CAYNNNNRTG | 2 cut(s) | 824, 977 |
| SacII | CCGCGG | 1 cut(s) | 464 |
| SaqAI | TTAA | 3 cut(s) | 75, 606, 1052 |
| SatI | GCNGC | 1 cut(s) | 287 |
| Sau3AI | GATC | 5 cut(s) | 7, 430, 628, 739, 936 |
| Sau96I | GGNCC | 5 cut(s) | 22, 31, 180, 322, 1044 |
| ScaI | AGTACT | 1 cut(s) | 896 |
| SchI | GAGTC | 2 cut(s) | 460, 1175 |
| ScrFI | CCNGG | 3 cut(s) | 152, 589, 1042 |
| SduI | GDGCHC | 4 cut(s) | 122, 278, 498, 868 |
| SfaNI | GCATC | 3 cut(s) | 685, 946, 1177 |
| Sfr274I | CTCGAG | 1 cut(s) | 375 |
| Sfr303I | CCGCGG | 1 cut(s) | 464 |
| SgrBI | CCGCGG | 1 cut(s) | 464 |
| SinI | GGWCC | 4 cut(s) | 22, 31, 180, 322 |
| SlaI | CTCGAG | 1 cut(s) | 375 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 824, 977 |
| SmlI | CTYRAG | 5 cut(s) | 115, 351, 375, 506, 632 |
| SmoI | CTYRAG | 5 cut(s) | 115, 351, 375, 506, 632 |
| Sse9I | AATT | 6 cut(s) | 422, 763, 779, 859, 1084, 1202 |
| SseBI | AGGCCT | 1 cut(s) | 1015 |
| SsiI | CCGC | 5 cut(s) | 320, 461, 463, 569, 837 |
| StuI | AGGCCT | 1 cut(s) | 1015 |
| StyD4I | CCNGG | 3 cut(s) | 150, 587, 1040 |
| StyI | CCWWGG | 3 cut(s) | 91, 215, 844 |
| TaaI | ACNGT | 3 cut(s) | 823, 1035, 1151 |
| TaiI | ACGT | 4 cut(s) | 84, 361, 616, 687 |
| TaqI | TCGA | 3 cut(s) | 376, 693, 777 |
| TaqII | GACCGA | 1 cut(s) | 197 |
| TasI | AATT | 6 cut(s) | 422, 763, 779, 859, 1084, 1202 |
| TatI | WGTACW | 1 cut(s) | 894 |
| TfiI | GAWTC | 4 cut(s) | 368, 412, 539, 1166 |
| Tru1I | TTAA | 3 cut(s) | 75, 606, 1052 |
| Tru9I | TTAA | 3 cut(s) | 75, 606, 1052 |
| TscAI | CASTG | 8 cut(s) | 64, 127, 392, 549, 749, 873, 889, 1038 |
| TseFI | GTSAC | 5 cut(s) | 247, 296, 359, 389, 886 |
| TseI | GCWGC | 1 cut(s) | 286 |
| Tsp45I | GTSAC | 5 cut(s) | 247, 296, 359, 389, 886 |
| TspDTI | ATGAA | 2 cut(s) | 887, 1087 |
| TspGWI | ACGGA | 3 cut(s) | 218, 905, 1155 |
| TspRI | CASTG | 8 cut(s) | 64, 127, 392, 549, 749, 873, 889, 1038 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 331, 659 |
| VpaK11BI | GGWCC | 4 cut(s) | 22, 31, 180, 322 |
| XapI | RAATTY | 2 cut(s) | 763, 1084 |
| XceI | RCATGY | 2 cut(s) | 306, 345 |
| XhoI | CTCGAG | 1 cut(s) | 375 |
| ZrmI | AGTACT | 1 cut(s) | 896 |