Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0008580

Physical Location & Seq

Genomic Coordinates Reverse (-)

4845068 .. 4847118

Gene Structure 2051 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000006162

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1719 bp

ATGGATTTATCATTATCCCCCATCTTCTTCGTTCTTCTCTCCCTCTACGTCTCCCCCTCCTTCTATGCACATCCCAGCAAGGAAACTGCGGCTGAAACTGTTTCAGCCGTCGCTTCCAACGGAGGAGGAGAGTGGGTTCTTCTTCAAAAAAGCATCGGAGTCTCGGCAATGCACATGCAGCTTCTCAAGAACAACAGAGTCATCATCTTCGACCGCACCAACATCGGCCCTTCCAACCTCACACTCCCCGAGGACAAAAAGTACTGCCTCAACTACACCATCCACAACAAACCCGAGCTCCTTATAGACTGCACTGCGCACTCCGTCTCATACGACGTCGCTTCCAACACTTTCCGCCCCCTCGTCTTCCGCACCGACCCGTGGTGCTCCTCCGGCTCCGTGGACCCTACTGGAACCCTAATCCAGACCGGAGGCTACGGCACCGGCAGCCGCGGAGTCCGCACTGTCCCGCCCTGCGACGACGACACGTGTGACTGGACGGAACATCAGCAAGACAACCTTGCGGAGAACAGGTGGTACGCCTCGTCGCAAATCCTCCCCGACGGACGAGTCATCGTCGTCGGAGGCCGAAAAGCTTTCACGTACGAGTTCTATCCCAAAACAAACGACAGGTCGTCGGATAAATATTACCTAAAATTTTTGGTAGAGACGTATGATCAGAGAGAGGAGAACAATCTCTATCCATTTTTGCATCTCTTGCCTGATGGGAACCTCTTCTTGTTTGCAAACAACCGGGTCATCAAGGAGTTTCCTGTCATGCCCGGCGGCGTCAAGAGGAACTACCCGAGCACCGGGTCGTCGGTGCTCCTCCCGCTCAAAATAAACGGGTTGGGTTTACCCGAAGCCGAGGTGTTGATATGCGGCGGAGCAGAGCTTGGTGCGTTTTCATTGACAGATGGAAAGTCGGACAAAAAGAAAGTGTTCAAGGGAGCCTCTAGCACTTGTGGCAGGATCAAAGTGACGGACCCGGATCCCAAATGGGCCATGGAGACGCTGCCCATGCCACGTGTCATGCCGGACATGCTGTTGTTACCGACGGGTGACGTGATCATCATCAACGGCGCGTCGAACGGGACTGCGGGCTGGGAAGATGCAACAAACCCTGTTTTGAACCCGGTTCTTTACAAGACCTACGAGAACAAACCGGAATCTCGGTTCACTGTACTCACTCCCTCTGAAATTCCGAGAATGTACCACTCCTCAGCCGTGCTTTTGCCAGATGGCAGGATATTAGTGGGCGGAAGCAACACTCACGAAAGGTACAGTTTCAGACGAACATTCCCTACTGACCTCAGCTTGGAGGCTTACATTCCACCGTACCTGGGCCACACCTTCCATACGCTGCGTCCTACAATCCTGTCCTTTGAATCAAGGACTAAGACTGTATCGTACGGTCAAAATTTCGGGGTTAAGTTTCGGTTAGATGTGCGTACAGATGATTCTTCCAAGTTTTCATTGGCCATCGTAACGCCGTCGTTTACGACGCACTCGTTTGCTATGAATCAGAGGATGGTGGTTTTGGAGATTGTTAGGTTGAAGCATTTGAACAGTAGATATAGAAAGCCGTCGGATAAGTATGATTACAAGATTGTGGCCCGCGGCCCACCGAAGAACACGGTGGCGCCGCCGGGTTACTATATGCTTTTCCTTGTTCATGCTGGAATTCCTGGCCAGGCTACTTGGGTGAAGGTGCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1929 Glyoxal_oxid_N

Protein Analysis

573

Amino Acids

63.77

Weight (kDa)

8.7

Isoelectric Point (pI)

35.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyoxal_oxid_N	PF07250	57 - 447	3.6e-164	Glyoxal oxidase N-terminus
GO-like_E_set	PF09118	456 - 571	5.8e-27	Galactose oxidase-like, Early set domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008580)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14430
fragaria_vesca	FvH4_4g31980 FvH4_4g31981
malus_domestica	MD13G1079200.v1.1 MD16G1079000.v1.1
prunus_persica	Prupe.1G267600_v2.0.a1
pyrus_communis	pycom13g06890
rosa_chinensis	RchiOBHm_Chr4g0440661 RchiOBHm_Chr4g0440671
rosa_laevigata	RLG00000006160 RLG00000006162
rosa_multiflora	Rmu_co8109046.1_g000001 Rmu_sc0008018.1_g000009 Rmu_sc0008018.1_g000010 Rmu_sc0032009.1_g000002
rosa_roxburghii	Rroxscaffold_5G00381470 Rroxscaffold_5G00381480
rosa_rugosa	Rorug04G0327500 Rorug04G0327500
rosa_samantha	Rh4CG406500 Rh4CG406600 Rh4CG406700
rosa_wichuraiana	Rw4G032610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	569
AatII	GACGTC	1 cut(s)	339
Acc16I	TGCGCA	1 cut(s)	318
AccB1I	GGYRCC	2 cut(s)	440, 1642
AccBSI	CCGCTC	1 cut(s)	835
AccII	CGCG	3 cut(s)	453, 1085, 1620
AclWI	GGATC	3 cut(s)	980, 986, 999
AcoI	YGGCCR	2 cut(s)	1479, 1690
AcsI	RAATTY	4 cut(s)	656, 1200, 1420, 1683
AcvI	CACGTG	2 cut(s)	489, 1028
AcyI	GRCGYC	3 cut(s)	336, 789, 1643
AfaI	GTAC	9 cut(s)	263, 539, 605, 1185, 1214, 1283, 1340, 1412, 1453
AfiI	CCNNNNNNNGG	4 cut(s)	381, 812, 1318, 1343
AflIII	ACRYGT	3 cut(s)	486, 488, 1027
AgsI	TTSAA	6 cut(s)	146, 946, 1132, 1388, 1558, 1567
AhdI	GACNNNNNGTC	1 cut(s)	634
AjiI	CACGTC	1 cut(s)	1066
AjnI	CCWGG	3 cut(s)	1341, 1687, 1692
AloI	GAACNNNNNNTCC	4 cut(s)	120, 152, 1160, 1192
AluBI	AGCT	5 cut(s)	181, 298, 596, 895, 1317
AluI	AGCT	5 cut(s)	181, 298, 596, 895, 1317
Alw21I	GWGCWC	4 cut(s)	300, 389, 812, 828
Alw26I	GTCTC	5 cut(s)	55, 166, 331, 662, 1004
AlwI	GGATC	3 cut(s)	980, 986, 999
Ama87I	CYCGRG	3 cut(s)	248, 293, 805
AoxI	GGCC	8 cut(s)	226, 586, 1002, 1345, 1479, 1614, 1621, 1690
ApeKI	GCWGC	4 cut(s)	178, 447, 1015, 1363
ApoI	RAATTY	4 cut(s)	656, 1200, 1420, 1683
ArsI	GACNNNNNNTTYG	2 cut(s)	617, 649
Asp700I	GAANNNNTTC	2 cut(s)	734, 941
AspLEI	GCGC	3 cut(s)	319, 1085, 1645
AspS9I	GGNCC	7 cut(s)	227, 403, 985, 1002, 1345, 1615, 1622
AsuC2I	CCSGG	6 cut(s)	755, 783, 814, 989, 1136, 1650
AsuHPI	GGTGA	2 cut(s)	1073, 1717
AvaI	CYCGRG	3 cut(s)	248, 293, 805
AvaII	GGWCC	2 cut(s)	403, 985
BalI	TGGCCA	2 cut(s)	1481, 1692
BamHI	GGATCC	1 cut(s)	991
BanI	GGYRCC	2 cut(s)	440, 1642
BanII	GRGCYC	1 cut(s)	300
BbrPI	CACGTG	2 cut(s)	489, 1028
BbsI	GAAGAC	1 cut(s)	358
Bbv12I	GWGCWC	4 cut(s)	300, 389, 812, 828
BbvCI	CCTCAGC	2 cut(s)	1222, 1313
BbvI	GCAGC	4 cut(s)	190, 459, 1002, 1350
BccI	CCATC	7 cut(s)	29, 287, 719, 911, 1235, 1490, 1525
BceAI	ACGGC	6 cut(s)	92, 454, 1096, 1211, 1477, 1570
BcgI	CGANNNNNNTGC	2 cut(s)	205, 239
BciT130I	CCWGG	3 cut(s)	1343, 1689, 1694
BclI	TGATCA	2 cut(s)	676, 1068
BcnI	CCSGG	6 cut(s)	755, 783, 814, 989, 1136, 1650
BcoDI	GTCTC	5 cut(s)	55, 166, 331, 662, 1004
BfaI	CTAG	1 cut(s)	957
BfoI	RGCGCY	1 cut(s)	1646
BmcAI	AGTACT	1 cut(s)	263
Bme1390I	CCNGG	9 cut(s)	755, 783, 814, 989, 1136, 1343, 1650, 1689, 1694
Bme18I	GGWCC	2 cut(s)	403, 985
BmeRI	GACNNNNNGTC	1 cut(s)	634
BmeT110I	CYCGRG	3 cut(s)	248, 293, 805
BmgBI	CACGTC	1 cut(s)	1066
BmgT120I	GGNCC	7 cut(s)	227, 403, 985, 1002, 1345, 1615, 1622
BmiI	GGNNCC	9 cut(s)	397, 405, 415, 442, 731, 952, 987, 993, 1644
BmrFI	CCNGG	9 cut(s)	755, 783, 814, 989, 1136, 1343, 1650, 1689, 1694
BmsI	GCATC	3 cut(s)	162, 721, 1102
BpiI	GAAGAC	1 cut(s)	358
Bpu10I	CCTNAGC	2 cut(s)	1222, 1313
BpuEI	CTTGAG	1 cut(s)	170
BpuMI	CCSGG	6 cut(s)	755, 783, 814, 989, 1136, 1650
BsaAI	YACGTR	3 cut(s)	489, 603, 1028
BsaBI	GATNNNNATC	1 cut(s)	1073
BsaHI	GRCGYC	3 cut(s)	336, 789, 1643
BsaJI	CCNNGG	8 cut(s)	249, 380, 399, 451, 867, 1005, 1342, 1618
BsaWI	WCCGGW	2 cut(s)	428, 1165
BsaXI	ACNNNNNCTCC	6 cut(s)	120, 150, 282, 312, 518, 548
Bsc4I	CCNNNNNNNGG	4 cut(s)	381, 812, 1318, 1343
Bse118I	RCCGGY	1 cut(s)	443
Bse1I	ACTGG	2 cut(s)	415, 500
Bse3DI	GCAATG	1 cut(s)	174
Bse8I	GATNNNNATC	1 cut(s)	1073
BseBI	CCWGG	3 cut(s)	1343, 1689, 1694
BseDI	CCNNGG	8 cut(s)	249, 380, 399, 451, 867, 1005, 1342, 1618
BseGI	GGATG	3 cut(s)	70, 279, 1536
BseJI	GATNNNNATC	1 cut(s)	1073
BseLI	CCNNNNNNNGG	4 cut(s)	381, 812, 1318, 1343
BseMI	GCAATG	1 cut(s)	174
BseMII	CTCAG	2 cut(s)	1236, 1327
BseNI	ACTGG	2 cut(s)	415, 500
BseRI	GAGGAG	6 cut(s)	138, 141, 379, 701, 818, 1210
BseXI	GCAGC	4 cut(s)	190, 459, 1002, 1350
BseYI	CCCAGC	2 cut(s)	74, 1104
BsgI	GTGCAG	1 cut(s)	295
Bsh1236I	CGCG	3 cut(s)	453, 1085, 1620
Bsh1285I	CGRYCG	1 cut(s)	214
BshFI	GGCC	8 cut(s)	228, 588, 1004, 1347, 1481, 1616, 1623, 1692
BshNI	GGYRCC	2 cut(s)	440, 1642
BsiEI	CGRYCG	1 cut(s)	214
BsiHKAI	GWGCWC	4 cut(s)	300, 389, 812, 828
BsiHKCI	CYCGRG	3 cut(s)	248, 293, 805
BsiWI	CGTACG	2 cut(s)	603, 1410
BslFI	GGGAC	2 cut(s)	452, 1108
BslI	CCNNNNNNNGG	4 cut(s)	381, 812, 1318, 1343
BsmAI	GTCTC	5 cut(s)	55, 166, 331, 662, 1004
BsmBI	CGTCTC	4 cut(s)	55, 331, 662, 1004
BsmFI	GGGAC	2 cut(s)	452, 1108
BsnI	GGCC	8 cut(s)	228, 588, 1004, 1347, 1481, 1616, 1623, 1692
BsoBI	CYCGRG	3 cut(s)	248, 293, 805
Bsp1286I	GDGCHC	4 cut(s)	300, 389, 812, 828
Bsp143I	GATC	4 cut(s)	676, 972, 991, 1068
Bsp19I	CCATGG	1 cut(s)	1005
BspANI	GGCC	8 cut(s)	228, 588, 1004, 1347, 1481, 1616, 1623, 1692
BspCNI	CTCAG	2 cut(s)	1235, 1326
BspFNI	CGCG	3 cut(s)	453, 1085, 1620
BspLI	GGNNCC	9 cut(s)	397, 405, 415, 442, 731, 952, 987, 993, 1644
BspPI	GGATC	3 cut(s)	980, 986, 999
BspT107I	GGYRCC	2 cut(s)	440, 1642
BsrBI	CCGCTC	1 cut(s)	835
BsrDI	GCAATG	1 cut(s)	174
BsrFI	RCCGGY	1 cut(s)	443
BsrI	ACTGG	2 cut(s)	415, 500
BssAI	RCCGGY	1 cut(s)	443
BssECI	CCNNGG	8 cut(s)	249, 380, 399, 451, 867, 1005, 1342, 1618
BssMI	GATC	4 cut(s)	676, 972, 991, 1068
BssNI	GRCGYC	3 cut(s)	336, 789, 1643
BssT1I	CCWWGG	1 cut(s)	1005
Bst2UI	CCWGG	3 cut(s)	1343, 1689, 1694
Bst4CI	ACNGT	9 cut(s)	100, 466, 1183, 1286, 1338, 1405, 1415, 1571, 1639
Bst6I	CTCTTC	1 cut(s)	740
BstACI	GRCGYC	3 cut(s)	336, 789, 1643
BstAPI	GCANNNNNTGC	1 cut(s)	718
BstBAI	YACGTR	3 cut(s)	489, 603, 1028
BstC8I	GCNNGC	2 cut(s)	1102, 1618
BstDEI	CTNAG	3 cut(s)	1222, 1313, 1398
BstDSI	CCRYGG	5 cut(s)	380, 399, 451, 1005, 1618
BstF5I	GGATG	3 cut(s)	70, 279, 1536
BstFNI	CGCG	3 cut(s)	453, 1085, 1620
BstH2I	RGCGCY	1 cut(s)	1646
BstHHI	GCGC	3 cut(s)	319, 1085, 1645
BstKTI	GATC	4 cut(s)	679, 975, 994, 1071
BstMAI	GTCTC	5 cut(s)	55, 166, 331, 662, 1004
BstMBI	GATC	4 cut(s)	676, 972, 991, 1068
BstMCI	CGRYCG	1 cut(s)	214
BstMWI	GCNNNNNNNGC	9 cut(s)	178, 393, 447, 459, 718, 832, 966, 1021, 1042
BstNI	CCWGG	3 cut(s)	1343, 1689, 1694
BstNSI	RCATGY	2 cut(s)	178, 1045
BstSCI	CCNGG	9 cut(s)	753, 781, 812, 987, 1134, 1341, 1648, 1687, 1692
BstUI	CGCG	3 cut(s)	453, 1085, 1620
BstV1I	GCAGC	4 cut(s)	190, 459, 1002, 1350
BstV2I	GAAGAC	1 cut(s)	358
BstX2I	RGATCY	1 cut(s)	991
BstYI	RGATCY	1 cut(s)	991
BsuRI	GGCC	8 cut(s)	228, 588, 1004, 1347, 1481, 1616, 1623, 1692
BtgI	CCRYGG	5 cut(s)	380, 399, 451, 1005, 1618
BtrI	CACGTC	1 cut(s)	1066
BtsCI	GGATG	3 cut(s)	70, 279, 1536
BtsI	GCAGTG	1 cut(s)	312
BtsIMutI	CAGTG	3 cut(s)	312, 462, 1179
Cac8I	GCNNGC	2 cut(s)	1102, 1618
CfoI	GCGC	3 cut(s)	319, 1085, 1645
Cfr10I	RCCGGY	1 cut(s)	443
Cfr13I	GGNCC	7 cut(s)	227, 403, 985, 1002, 1345, 1615, 1622
Cfr42I	CCGCGG	2 cut(s)	454, 1621
CseI	GACGC	5 cut(s)	778, 1021, 1074, 1355, 1513
Csp6I	GTAC	9 cut(s)	262, 538, 604, 1184, 1213, 1282, 1339, 1411, 1452
CviAII	CATG	7 cut(s)	175, 778, 1006, 1021, 1033, 1042, 1676
CviQI	GTAC	9 cut(s)	262, 538, 604, 1184, 1213, 1282, 1339, 1411, 1452
DdeI	CTNAG	3 cut(s)	1222, 1313, 1398
DinI	GGCGCC	1 cut(s)	1644
DpnI	GATC	4 cut(s)	678, 974, 993, 1070
DpnII	GATC	4 cut(s)	676, 972, 991, 1068
DrdI	GACNNNNNNGTC	1 cut(s)	569
DriI	GACNNNNNGTC	1 cut(s)	634
DseDI	GACNNNNNNGTC	1 cut(s)	569
EaeI	YGGCCR	2 cut(s)	1479, 1690
Eam1104I	CTCTTC	1 cut(s)	740
Eam1105I	GACNNNNNGTC	1 cut(s)	634
EarI	CTCTTC	1 cut(s)	740
EciI	GGCGGA	3 cut(s)	344, 900, 1275
Ecl136II	GAGCTC	1 cut(s)	298
Eco130I	CCWWGG	1 cut(s)	1005
Eco24I	GRGCYC	1 cut(s)	300
Eco47I	GGWCC	2 cut(s)	403, 985
Eco53kI	GAGCTC	1 cut(s)	298
Eco72I	CACGTG	2 cut(s)	489, 1028
Eco88I	CYCGRG	3 cut(s)	248, 293, 805
EcoICRI	GAGCTC	1 cut(s)	298
EcoRI	GAATTC	1 cut(s)	1683
EcoRII	CCWGG	3 cut(s)	1341, 1687, 1692
EcoT14I	CCWWGG	1 cut(s)	1005
EcoT38I	GRGCYC	1 cut(s)	300
EgeI	GGCGCC	1 cut(s)	1644
EheI	GGCGCC	1 cut(s)	1644
ErhI	CCWWGG	1 cut(s)	1005
Esp3I	CGTCTC	4 cut(s)	55, 331, 662, 1004
FaeI	CATG	7 cut(s)	178, 781, 1009, 1024, 1036, 1045, 1679
FalI	AAGNNNNNCTT	2 cut(s)	504, 536
FaqI	GGGAC	2 cut(s)	452, 1108
FatI	CATG	7 cut(s)	174, 777, 1005, 1020, 1032, 1041, 1675
FauI	CCCGC	4 cut(s)	477, 840, 1093, 1625
FbaI	TGATCA	2 cut(s)	676, 1068
FokI	GGATG	3 cut(s)	57, 266, 1543
FriOI	GRGCYC	1 cut(s)	300
FspBI	CTAG	1 cut(s)	957
FspI	TGCGCA	1 cut(s)	318
GlaI	GCGC	3 cut(s)	318, 1084, 1644
GsaI	CCCAGC	2 cut(s)	78, 1108
HaeII	RGCGCY	1 cut(s)	1646
HaeIII	GGCC	8 cut(s)	228, 588, 1004, 1347, 1481, 1616, 1623, 1692
HgaI	GACGC	5 cut(s)	778, 1021, 1074, 1355, 1513
HhaI	GCGC	3 cut(s)	319, 1085, 1645
Hin1I	GRCGYC	3 cut(s)	336, 789, 1643
Hin1II	CATG	7 cut(s)	178, 781, 1009, 1024, 1036, 1045, 1679
Hin6I	GCGC	3 cut(s)	317, 1083, 1643
HinP1I	GCGC	3 cut(s)	317, 1083, 1643
HindIII	AAGCTT	1 cut(s)	594
HinfI	GANTC	8 cut(s)	159, 198, 456, 570, 1169, 1388, 1460, 1522
HphI	GGTGA	2 cut(s)	1073, 1717
Hpy166II	GTNNAC	4 cut(s)	403, 857, 1179, 1500
Hpy188III	TCNNGA	4 cut(s)	187, 424, 793, 1274
Hpy8I	GTNNAC	4 cut(s)	403, 857, 1179, 1500
HpyAV	CCTTC	4 cut(s)	70, 240, 1363, 1702
HpyCH4III	ACNGT	9 cut(s)	100, 466, 1183, 1286, 1338, 1405, 1415, 1571, 1639
HpyCH4IV	ACGT	7 cut(s)	48, 336, 488, 602, 671, 1027, 1065
HpyCH4V	TGCA	8 cut(s)	68, 172, 178, 312, 712, 746, 1115, 1714
HpyF10VI	GCNNNNNNNGC	9 cut(s)	178, 393, 447, 459, 718, 832, 966, 1021, 1042
HpyF3I	CTNAG	3 cut(s)	1222, 1313, 1398
HpySE526I	ACGT	7 cut(s)	48, 336, 488, 602, 671, 1027, 1065
Hsp92I	GRCGYC	3 cut(s)	336, 789, 1643
Hsp92II	CATG	7 cut(s)	178, 781, 1009, 1024, 1036, 1045, 1679
HspAI	GCGC	3 cut(s)	317, 1083, 1643
KasI	GGCGCC	1 cut(s)	1642
Ksp22I	TGATCA	2 cut(s)	676, 1068
KspI	CCGCGG	2 cut(s)	454, 1621
Kzo9I	GATC	4 cut(s)	676, 972, 991, 1068
LmnI	GCTCC	6 cut(s)	303, 392, 401, 831, 887, 950
Lsp1109I	GCAGC	4 cut(s)	190, 459, 1002, 1350
LweI	GCATC	3 cut(s)	162, 721, 1102
MaeI	CTAG	1 cut(s)	957
MaeII	ACGT	7 cut(s)	48, 336, 488, 602, 671, 1027, 1065
MaeIII	GTNAC	6 cut(s)	491, 979, 1050, 1061, 1486, 1652
MalI	GATC	4 cut(s)	678, 974, 993, 1070
MbiI	CCGCTC	1 cut(s)	835
MboI	GATC	4 cut(s)	676, 972, 991, 1068
MflI	RGATCY	1 cut(s)	991
MhlI	GDGCHC	4 cut(s)	300, 389, 812, 828
MlsI	TGGCCA	2 cut(s)	1481, 1692
MluCI	AATT	4 cut(s)	656, 1200, 1420, 1683
MluNI	TGGCCA	2 cut(s)	1481, 1692
Mly113I	GGCGCC	1 cut(s)	1643
MlyI	GAGTC	4 cut(s)	168, 207, 465, 579
MmeI	TCCRAC	7 cut(s)	141, 258, 369, 562, 618, 906, 1569
Mox20I	TGGCCA	2 cut(s)	1481, 1692
MroXI	GAANNNNTTC	2 cut(s)	734, 941
MscI	TGGCCA	2 cut(s)	1481, 1692
MseI	TTAA	1 cut(s)	1431
Msp20I	TGGCCA	2 cut(s)	1481, 1692
MspA1I	CMGCKG	2 cut(s)	453, 1620
MspR9I	CCNGG	9 cut(s)	755, 783, 814, 989, 1136, 1343, 1650, 1689, 1694
MvaI	CCWGG	3 cut(s)	1343, 1689, 1694
MvnI	CGCG	3 cut(s)	453, 1085, 1620
MwoI	GCNNNNNNNGC	9 cut(s)	178, 393, 447, 459, 718, 832, 966, 1021, 1042
NarI	GGCGCC	1 cut(s)	1643
NciI	CCSGG	6 cut(s)	755, 783, 814, 989, 1136, 1650
NcoI	CCATGG	1 cut(s)	1005
NdeII	GATC	4 cut(s)	676, 972, 991, 1068
NlaIII	CATG	7 cut(s)	178, 781, 1009, 1024, 1036, 1045, 1679
NlaIV	GGNNCC	9 cut(s)	397, 405, 415, 442, 731, 952, 987, 993, 1644
NmeAIII	GCCGAG	2 cut(s)	143, 892
NmuCI	GTSAC	3 cut(s)	491, 979, 1061
NsbI	TGCGCA	1 cut(s)	318
NspI	RCATGY	2 cut(s)	178, 1045
PcsI	WCGNNNNNNNCGW	1 cut(s)	1508
PdmI	GAANNNNTTC	2 cut(s)	734, 941
PfeI	GAWTC	4 cut(s)	1169, 1388, 1460, 1522
Pfl23II	CGTACG	2 cut(s)	603, 1410
PleI	GAGTC	4 cut(s)	167, 206, 464, 578
PluTI	GGCGCC	1 cut(s)	1646
PmaCI	CACGTG	2 cut(s)	489, 1028
PmlI	CACGTG	2 cut(s)	489, 1028
PpsI	GAGTC	4 cut(s)	167, 206, 464, 578
Ppu21I	YACGTR	3 cut(s)	489, 603, 1028
Psp124BI	GAGCTC	1 cut(s)	300
Psp6I	CCWGG	3 cut(s)	1341, 1687, 1692
PspCI	CACGTG	2 cut(s)	489, 1028
PspFI	CCCAGC	2 cut(s)	74, 1104
PspGI	CCWGG	3 cut(s)	1341, 1687, 1692
PspLI	CGTACG	2 cut(s)	603, 1410
PspN4I	GGNNCC	9 cut(s)	397, 405, 415, 442, 731, 952, 987, 993, 1644
PspPI	GGNCC	7 cut(s)	227, 403, 985, 1002, 1345, 1615, 1622
PsrI	GAACNNNNNNTAC	4 cut(s)	521, 553, 1288, 1320
PsuI	RGATCY	1 cut(s)	991
RsaI	GTAC	9 cut(s)	263, 539, 605, 1185, 1214, 1283, 1340, 1412, 1453
RsaNI	GTAC	9 cut(s)	262, 538, 604, 1184, 1213, 1282, 1339, 1411, 1452
SacI	GAGCTC	1 cut(s)	300
SacII	CCGCGG	2 cut(s)	454, 1621
SaqAI	TTAA	1 cut(s)	1431
Sau3AI	GATC	4 cut(s)	676, 972, 991, 1068
Sau96I	GGNCC	7 cut(s)	227, 403, 985, 1002, 1345, 1615, 1622
ScaI	AGTACT	1 cut(s)	263
SchI	GAGTC	4 cut(s)	168, 207, 465, 579
ScrFI	CCNGG	9 cut(s)	755, 783, 814, 989, 1136, 1343, 1650, 1689, 1694
SduI	GDGCHC	4 cut(s)	300, 389, 812, 828
SfaNI	GCATC	3 cut(s)	162, 721, 1102
SfoI	GGCGCC	1 cut(s)	1644
Sfr303I	CCGCGG	2 cut(s)	454, 1621
SgrBI	CCGCGG	2 cut(s)	454, 1621
SinI	GGWCC	2 cut(s)	403, 985
SmlI	CTYRAG	1 cut(s)	185
SmoI	CTYRAG	1 cut(s)	185
Sse9I	AATT	4 cut(s)	656, 1200, 1420, 1683
SspDI	GGCGCC	1 cut(s)	1642
SspI	AATATT	1 cut(s)	647
SspMI	CTAG	1 cut(s)	957
SstI	GAGCTC	1 cut(s)	300
StyD4I	CCNGG	9 cut(s)	753, 781, 812, 987, 1134, 1341, 1648, 1687, 1692
StyI	CCWWGG	1 cut(s)	1005
TaaI	ACNGT	9 cut(s)	100, 466, 1183, 1286, 1338, 1405, 1415, 1571, 1639
TaiI	ACGT	7 cut(s)	51, 339, 491, 605, 674, 1030, 1068
TaqI	TCGA	2 cut(s)	210, 1088
TasI	AATT	4 cut(s)	656, 1200, 1420, 1683
TatI	WGTACW	2 cut(s)	261, 1183
TauI	GCSGC	6 cut(s)	92, 453, 789, 885, 1623, 1648
TfiI	GAWTC	4 cut(s)	1169, 1388, 1460, 1522
Tru1I	TTAA	1 cut(s)	1431
Tru9I	TTAA	1 cut(s)	1431
TscAI	CASTG	3 cut(s)	319, 469, 1186
TseFI	GTSAC	3 cut(s)	491, 979, 1061
TseI	GCWGC	4 cut(s)	178, 447, 1015, 1363
Tsp45I	GTSAC	3 cut(s)	491, 979, 1061
TspDTI	ATGAA	4 cut(s)	897, 1464, 1535, 1664
TspGWI	ACGGA	6 cut(s)	135, 313, 388, 515, 579, 998
TspRI	CASTG	3 cut(s)	319, 469, 1186
VpaK11BI	GGWCC	2 cut(s)	403, 985
XapI	RAATTY	4 cut(s)	656, 1200, 1420, 1683
XceI	RCATGY	2 cut(s)	178, 1045
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1003, 1474
XmnI	GAANNNNTTC	2 cut(s)	734, 941
XspI	CTAG	1 cut(s)	957
ZraI	GACGTC	1 cut(s)	337
ZrmI	AGTACT	1 cut(s)	263

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.