Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0008580

Physical Location & Seq

Genomic Coordinates Forward (+)

59697152 .. 59707804

Gene Structure 10653 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G032610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1683 bp

ATGGCTTTATTATTATCCCCCATCTTCTCCATTATTCTTCTCTCCCTCTATGTCTCCCCCTCCTTTTATGCACATCCGAGCAAGGAAACTGCGGCGGAAACTCTTTCAGCCGTCGCTTCCAACGGAGGAGGAGAGTGGGTTCTTCTTCAAAAAAGCATCGGAGTCTCGGCAATGCACATGCAGCTTCTCAAGAACAACAGAGTCATCATCTTCGACCGCACCAACATCGGCCCTTCCAACCTCACACTCCCCGAGGACAAAAAGTACTGCCTCAACTACACCATCCACAACAAACCCGAGCTCCTTATAGACTGCACCGCGCACTCCGTCTCCTACGACGTCGCTTCCAACACTTTCCGCCCCCTCGTCATCCGCACCGACCCGTGGTGCTCCTCCGGCTCCGTGGACCCAACCGGAACCCTAATCCAGACCGGAGGCTACGGCACCGGCAGCCGCGGCGTCCGCACGGTCCCTCCCTGCGACGACGACACGTGTGACTGGACGGAACATCAGCAAGACAGCCTCGCGGAGAACAGGTGGTGGTACGCGACTAACCAGATTCTCCCCGACGGCCGCGTCATCGTCGTCGGCGGAAGGCGGGCTTTCAACTACGAGTTCTTGTGGGAGACGACGGACTTTTACGAGGAGAACAATCTTTATCCGTTCTTGCATCTCTTGCCCGACGGCAACCTCTTCGTTTTCGCCAACAACCGGTCGATTCTCTTCGACTACAACAACAACACCGTCGTCAAGGAATTTCCGGCAATGCCAGGCGGTGTCAAGCGGTCCTACCCGGCCACCGGGTCGTCGGTGATGCTCCCGCTCAAGATGAACGGGGTTCTTGACGGGTCAGGTCAACCCGAGGTGGAAATCTTGATTTGCGGCGGGTCCTACGGCGGCGCTTACTACAAATCGAACCGGGAGAATGTCTACATCGGCGCATCCGCCAGCTGCGGCCGGATCAATCTCTCGGATCCGAACCCGAACTGGGTCATGGAGGAAATGCCGCTGCCACGTGTCATGGGCGACATGCTGCTCTTGCCGAACGGTGACGTCCTCATCCTGAACGGCGCGGCGAACGGAACGGCAGGGTGGGAGGACGCGATCAACCCGGTTTTGCACCCGGTGCTGTACAAGACCTACGAGCCCGACCCGAGCCGCCGGTTTGTCATACTGAACCCGACCGCAATCCCCAGAATGTACCACTCCTCGTGTTTGCTGTTGCCAGATGGCAGAATACTAGTGGGCGGGAGCAACCCCCACCAAATGTACAACTTCAGGCGAGCTTTCCCGACCGAGCTGAGCCTGGAGGCGTATCTTCCGCCGTACCTGAGCCCCGGCTCGACCCCTCGGCGCCCTACGATCATATCCATCGAAGCAGAAGGAGGGAACATCGTATCGTACGGTCAGGAATTCTCCGTCAACTTCGGACTGTCAGTGTACCGGCCTGGGGTGGCGATAACCATCGCGCTAGTTTCGCCGTCGTTTACGACGCATTCGCTGGCCATGAACCAGAGGGTGGTGGTTTTGGAGGTAGCGAGTCTGAAGCGTTTGTCTGTTTTCGATTACAAGATTACGGCGCGGGGCCCGCCGTCGACCACCGTGGCGCCACCTGGGTATTACATGATATTCATTGTCCACGCTGGAGTTCCAGGTCAGGCTCTGTGGGTCAAGGTGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1929 Glyoxal_oxid_N

Protein Analysis

560

Amino Acids

61.6

Weight (kDa)

5.91

Isoelectric Point (pI)

48.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyoxal_oxid_N	PF07250	58 - 443	2e-162	Glyoxal oxidase N-terminus
GO-like_E_set	PF09118	452 - 559	9e-27	Galactose oxidase-like, Early set domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008580)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14430
fragaria_vesca	FvH4_4g31980 FvH4_4g31981
malus_domestica	MD13G1079200.v1.1 MD16G1079000.v1.1
prunus_persica	Prupe.1G267600_v2.0.a1
pyrus_communis	pycom13g06890
rosa_chinensis	RchiOBHm_Chr4g0440661 RchiOBHm_Chr4g0440671
rosa_laevigata	RLG00000006160 RLG00000006162
rosa_multiflora	Rmu_co8109046.1_g000001 Rmu_sc0008018.1_g000009 Rmu_sc0008018.1_g000010 Rmu_sc0032009.1_g000002
rosa_roxburghii	Rroxscaffold_5G00381470 Rroxscaffold_5G00381480
rosa_rugosa	Rorug04G0327500 Rorug04G0327500
rosa_samantha	Rh4CG406500 Rh4CG406600 Rh4CG406700
rosa_wichuraiana	Rw4G032610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	575
AatII	GACGTC	2 cut(s)	342, 1056
AccB1I	GGYRCC	3 cut(s)	443, 1353, 1606
AccB7I	CCANNNNNTGG	1 cut(s)	1519
AccBSI	CCGCTC	1 cut(s)	823
AccI	GTMKAC	2 cut(s)	930, 1595
AccII	CGCG	9 cut(s)	320, 456, 527, 548, 576, 1073, 1103, 1469, 1582
AclWI	GGATC	3 cut(s)	968, 968, 981
AcoI	YGGCCR	4 cut(s)	571, 795, 955, 1503
AcsI	RAATTY	2 cut(s)	755, 1412
AcuI	CTGAAG	2 cut(s)	1261, 1565
AcvI	CACGTG	2 cut(s)	492, 1016
AcyI	GRCGYC	5 cut(s)	339, 459, 1053, 1354, 1607
AdeI	CACNNNGTG	1 cut(s)	1126
AfaI	GTAC	8 cut(s)	266, 545, 1133, 1202, 1271, 1328, 1403, 1442
AfiI	CCNNNNNNNGG	6 cut(s)	384, 711, 800, 988, 1450, 1519
AflIII	ACRYGT	3 cut(s)	489, 491, 1015
AgeI	ACCGGT	1 cut(s)	711
AgsI	TTSAA	2 cut(s)	149, 607
AhlI	ACTAGT	1 cut(s)	1240
AjnI	CCWGG	5 cut(s)	769, 1305, 1447, 1612, 1651
AloI	GAACNNNNNNTCC	2 cut(s)	123, 155
AluBI	AGCT	5 cut(s)	184, 301, 951, 1286, 1300
AluI	AGCT	5 cut(s)	184, 301, 951, 1286, 1300
Alw21I	GWGCWC	2 cut(s)	303, 392
Alw26I	GTCTC	4 cut(s)	58, 169, 334, 620
AlwI	GGATC	3 cut(s)	968, 968, 981
AlwNI	CAGNNNCTG	1 cut(s)	1663
Ama87I	CYCGRG	4 cut(s)	251, 296, 860, 1153
AoxI	GGCC	7 cut(s)	229, 571, 795, 955, 1445, 1503, 1585
ApaI	GGGCCC	1 cut(s)	1589
ApeKI	GCWGC	5 cut(s)	181, 450, 951, 1009, 1033
ApoI	RAATTY	2 cut(s)	755, 1412
AsiGI	ACCGGT	1 cut(s)	711
AspLEI	GCGC	8 cut(s)	322, 902, 941, 1073, 1356, 1471, 1582, 1609
AspS9I	GGNCC	7 cut(s)	230, 406, 469, 786, 888, 1585, 1586
AsuC2I	CCSGG	6 cut(s)	794, 802, 920, 1112, 1124, 1338
AsuHPI	GGTGA	2 cut(s)	823, 1061
AvaI	CYCGRG	4 cut(s)	251, 296, 860, 1153
AvaII	GGWCC	4 cut(s)	406, 469, 786, 888
BaeGI	GKGCMC	1 cut(s)	1589
BalI	TGGCCA	1 cut(s)	1505
BamHI	GGATCC	1 cut(s)	973
BanI	GGYRCC	3 cut(s)	443, 1353, 1606
BanII	GRGCYC	4 cut(s)	303, 1149, 1337, 1589
BauI	CACGAG	1 cut(s)	1210
BbrPI	CACGTG	2 cut(s)	492, 1016
Bbv12I	GWGCWC	2 cut(s)	303, 392
BbvI	GCAGC	5 cut(s)	193, 462, 938, 996, 1020
BccI	CCATC	5 cut(s)	29, 290, 1223, 1379, 1472
BcgI	CGANNNNNNTGC	4 cut(s)	208, 242, 676, 710
BciT130I	CCWGG	5 cut(s)	771, 1307, 1449, 1614, 1653
BcnI	CCSGG	6 cut(s)	794, 802, 920, 1112, 1124, 1338
BcoDI	GTCTC	4 cut(s)	58, 169, 334, 620
BcuI	ACTAGT	1 cut(s)	1240
BfaI	CTAG	2 cut(s)	1241, 1472
BfoI	RGCGCY	3 cut(s)	903, 1357, 1610
BlpI	GCTNAGC	1 cut(s)	1301
BmcAI	AGTACT	1 cut(s)	266
Bme18I	GGWCC	4 cut(s)	406, 469, 786, 888
BmeT110I	CYCGRG	4 cut(s)	251, 296, 860, 1153
BmgT120I	GGNCC	7 cut(s)	230, 406, 469, 786, 888, 1585, 1586
BmrI	ACTGGG	1 cut(s)	997
BmsI	GCATC	4 cut(s)	165, 679, 804, 950
BmuI	ACTGGG	1 cut(s)	997
BpmI	CTGGAG	2 cut(s)	1328, 1665
Bpu10I	CCTNAGC	1 cut(s)	1331
Bpu1102I	GCTNAGC	1 cut(s)	1301
BpuEI	CTTGAG	2 cut(s)	173, 809
BpuMI	CCSGG	6 cut(s)	794, 802, 920, 1112, 1124, 1338
BsaAI	YACGTR	2 cut(s)	492, 1016
BsaBI	GATNNNNATC	1 cut(s)	1463
BsaHI	GRCGYC	5 cut(s)	339, 459, 1053, 1354, 1607
BsaWI	WCCGGW	3 cut(s)	413, 431, 711
Bsc4I	CCNNNNNNNGG	6 cut(s)	384, 711, 800, 988, 1450, 1519
Bse118I	RCCGGY	4 cut(s)	446, 711, 1161, 1443
Bse1I	ACTGG	2 cut(s)	503, 992
Bse3DI	GCAATG	2 cut(s)	177, 771
Bse8I	GATNNNNATC	1 cut(s)	1463
BseBI	CCWGG	5 cut(s)	771, 1307, 1449, 1614, 1653
BseGI	GGATG	5 cut(s)	73, 282, 369, 941, 1059
BseJI	GATNNNNATC	1 cut(s)	1463
BseLI	CCNNNNNNNGG	6 cut(s)	384, 711, 800, 988, 1450, 1519
BseMI	GCAATG	2 cut(s)	177, 771
BseMII	CTCAG	2 cut(s)	1292, 1322
BseNI	ACTGG	2 cut(s)	503, 992
BseRI	GAGGAG	5 cut(s)	141, 144, 382, 659, 1198
BseSI	GKGCMC	1 cut(s)	1589
BseX3I	CGGCCG	2 cut(s)	571, 955
BseXI	GCAGC	5 cut(s)	193, 462, 938, 996, 1020
BsgI	GTGCAG	1 cut(s)	298
Bsh1236I	CGCG	9 cut(s)	320, 456, 527, 548, 576, 1073, 1103, 1469, 1582
Bsh1285I	CGRYCG	6 cut(s)	217, 574, 716, 958, 1185, 1296
BshFI	GGCC	7 cut(s)	231, 573, 797, 957, 1447, 1505, 1587
BshNI	GGYRCC	3 cut(s)	443, 1353, 1606
BshTI	ACCGGT	1 cut(s)	711
BsiEI	CGRYCG	6 cut(s)	217, 574, 716, 958, 1185, 1296
BsiHKAI	GWGCWC	2 cut(s)	303, 392
BsiHKCI	CYCGRG	4 cut(s)	251, 296, 860, 1153
BsiWI	CGTACG	1 cut(s)	1401
BslFI	GGGAC	1 cut(s)	455
BslI	CCNNNNNNNGG	6 cut(s)	384, 711, 800, 988, 1450, 1519
BsmAI	GTCTC	4 cut(s)	58, 169, 334, 620
BsmBI	CGTCTC	2 cut(s)	334, 620
BsmFI	GGGAC	1 cut(s)	455
BsmI	GAATGC	1 cut(s)	1495
BsnI	GGCC	7 cut(s)	231, 573, 797, 957, 1447, 1505, 1587
BsoBI	CYCGRG	4 cut(s)	251, 296, 860, 1153
Bsp120I	GGGCCC	1 cut(s)	1585
Bsp1286I	GDGCHC	5 cut(s)	303, 392, 1149, 1337, 1589
Bsp1407I	TGTACA	2 cut(s)	1131, 1269
Bsp143I	GATC	4 cut(s)	960, 973, 1104, 1362
Bsp1720I	GCTNAGC	1 cut(s)	1301
BspANI	GGCC	7 cut(s)	231, 573, 797, 957, 1447, 1505, 1587
BspCNI	CTCAG	2 cut(s)	1293, 1323
BspFNI	CGCG	9 cut(s)	320, 456, 527, 548, 576, 1073, 1103, 1469, 1582
BspPI	GGATC	3 cut(s)	968, 968, 981
BspT107I	GGYRCC	3 cut(s)	443, 1353, 1606
BsrBI	CCGCTC	1 cut(s)	823
BsrDI	GCAATG	2 cut(s)	177, 771
BsrFI	RCCGGY	4 cut(s)	446, 711, 1161, 1443
BsrGI	TGTACA	2 cut(s)	1131, 1269
BsrI	ACTGG	2 cut(s)	503, 992
BssAI	RCCGGY	4 cut(s)	446, 711, 1161, 1443
BssMI	GATC	4 cut(s)	960, 973, 1104, 1362
BssNI	GRCGYC	5 cut(s)	339, 459, 1053, 1354, 1607
BssSI	CACGAG	1 cut(s)	1210
Bst2BI	CACGAG	1 cut(s)	1210
Bst2UI	CCWGG	5 cut(s)	771, 1307, 1449, 1614, 1653
Bst4CI	ACNGT	6 cut(s)	469, 745, 1049, 1406, 1434, 1603
Bst6I	CTCTTC	2 cut(s)	698, 728
BstACI	GRCGYC	5 cut(s)	339, 459, 1053, 1354, 1607
BstAPI	GCANNNNNTGC	2 cut(s)	676, 1126
BstAUI	TGTACA	2 cut(s)	1131, 1269
BstBAI	YACGTR	2 cut(s)	492, 1016
BstC8I	GCNNGC	5 cut(s)	600, 949, 1284, 1503, 1589
BstDEI	CTNAG	2 cut(s)	1301, 1331
BstDSI	CCRYGG	4 cut(s)	383, 402, 454, 1602
BstF5I	GGATG	5 cut(s)	73, 282, 369, 941, 1059
BstFNI	CGCG	9 cut(s)	320, 456, 527, 548, 576, 1073, 1103, 1469, 1582
BstH2I	RGCGCY	3 cut(s)	903, 1357, 1610
BstHHI	GCGC	8 cut(s)	322, 902, 941, 1073, 1356, 1471, 1582, 1609
BstKTI	GATC	4 cut(s)	963, 976, 1107, 1365
BstMAI	GTCTC	4 cut(s)	58, 169, 334, 620
BstMBI	GATC	4 cut(s)	960, 973, 1104, 1362
BstMCI	CGRYCG	6 cut(s)	217, 574, 716, 958, 1185, 1296
BstNI	CCWGG	5 cut(s)	771, 1307, 1449, 1614, 1653
BstNSI	RCATGY	2 cut(s)	181, 1033
BstSLI	GKGCMC	1 cut(s)	1589
BstUI	CGCG	9 cut(s)	320, 456, 527, 548, 576, 1073, 1103, 1469, 1582
BstV1I	GCAGC	5 cut(s)	193, 462, 938, 996, 1020
BstX2I	RGATCY	1 cut(s)	973
BstYI	RGATCY	1 cut(s)	973
BstZI	CGGCCG	2 cut(s)	571, 955
BsuRI	GGCC	7 cut(s)	231, 573, 797, 957, 1447, 1505, 1587
BtgI	CCRYGG	4 cut(s)	383, 402, 454, 1602
BtgZI	GCGATG	1 cut(s)	1450
BtsCI	GGATG	5 cut(s)	73, 282, 369, 941, 1059
BtsIMutI	CAGTG	1 cut(s)	1443
Cac8I	GCNNGC	5 cut(s)	600, 949, 1284, 1503, 1589
CaiI	CAGNNNCTG	1 cut(s)	1663
CfoI	GCGC	8 cut(s)	322, 902, 941, 1073, 1356, 1471, 1582, 1609
Cfr10I	RCCGGY	4 cut(s)	446, 711, 1161, 1443
Cfr13I	GGNCC	7 cut(s)	230, 406, 469, 786, 888, 1585, 1586
Cfr42I	CCGCGG	1 cut(s)	457
CseI	GACGC	4 cut(s)	448, 565, 1109, 1501
Csp6I	GTAC	8 cut(s)	265, 544, 1132, 1201, 1270, 1327, 1402, 1441
CspAI	ACCGGT	1 cut(s)	711
CviAII	CATG	6 cut(s)	178, 994, 1021, 1030, 1507, 1624
CviQI	GTAC	8 cut(s)	265, 544, 1132, 1201, 1270, 1327, 1402, 1441
DdeI	CTNAG	2 cut(s)	1301, 1331
DinI	GGCGCC	2 cut(s)	1355, 1608
DpnI	GATC	4 cut(s)	962, 975, 1106, 1364
DpnII	GATC	4 cut(s)	960, 973, 1104, 1362
DraIII	CACNNNGTG	1 cut(s)	1126
DrdI	GACNNNNNNGTC	1 cut(s)	575
DseDI	GACNNNNNNGTC	1 cut(s)	575
EaeI	YGGCCR	4 cut(s)	571, 795, 955, 1503
EagI	CGGCCG	2 cut(s)	571, 955
Eam1104I	CTCTTC	2 cut(s)	698, 728
EarI	CTCTTC	2 cut(s)	698, 728
EciI	GGCGGA	5 cut(s)	110, 347, 606, 934, 1311
Ecl136II	GAGCTC	1 cut(s)	301
EclXI	CGGCCG	2 cut(s)	571, 955
Eco24I	GRGCYC	4 cut(s)	303, 1149, 1337, 1589
Eco47I	GGWCC	4 cut(s)	406, 469, 786, 888
Eco52I	CGGCCG	2 cut(s)	571, 955
Eco53kI	GAGCTC	1 cut(s)	301
Eco57I	CTGAAG	2 cut(s)	1261, 1565
Eco72I	CACGTG	2 cut(s)	492, 1016
Eco88I	CYCGRG	4 cut(s)	251, 296, 860, 1153
EcoICRI	GAGCTC	1 cut(s)	301
EcoO109I	RGGNCCY	2 cut(s)	888, 1585
EcoRI	GAATTC	1 cut(s)	1412
EcoRII	CCWGG	5 cut(s)	769, 1305, 1447, 1612, 1651
EcoT38I	GRGCYC	4 cut(s)	303, 1149, 1337, 1589
EgeI	GGCGCC	2 cut(s)	1355, 1608
EheI	GGCGCC	2 cut(s)	1355, 1608
Esp3I	CGTCTC	2 cut(s)	334, 620
FaeI	CATG	6 cut(s)	181, 997, 1024, 1033, 1510, 1627
FalI	AAGNNNNNCTT	2 cut(s)	586, 618
FaqI	GGGAC	1 cut(s)	455
FatI	CATG	6 cut(s)	177, 993, 1020, 1029, 1506, 1623
FauI	CCCGC	6 cut(s)	591, 828, 878, 1241, 1575, 1596
FblI	GTMKAC	2 cut(s)	930, 1595
FokI	GGATG	5 cut(s)	60, 269, 356, 928, 1046
FriOI	GRGCYC	4 cut(s)	303, 1149, 1337, 1589
FspBI	CTAG	2 cut(s)	1241, 1472
GlaI	GCGC	8 cut(s)	321, 901, 940, 1072, 1355, 1470, 1581, 1608
GsuI	CTGGAG	2 cut(s)	1328, 1665
HaeII	RGCGCY	3 cut(s)	903, 1357, 1610
HaeIII	GGCC	7 cut(s)	231, 573, 797, 957, 1447, 1505, 1587
HgaI	GACGC	4 cut(s)	448, 565, 1109, 1501
HhaI	GCGC	8 cut(s)	322, 902, 941, 1073, 1356, 1471, 1582, 1609
Hin1I	GRCGYC	5 cut(s)	339, 459, 1053, 1354, 1607
Hin1II	CATG	6 cut(s)	181, 997, 1024, 1033, 1510, 1627
Hin6I	GCGC	8 cut(s)	320, 900, 939, 1071, 1354, 1469, 1580, 1607
HinP1I	GCGC	8 cut(s)	320, 900, 939, 1071, 1354, 1469, 1580, 1607
HincII	GTYRAC	3 cut(s)	857, 1423, 1596
HindII	GTYRAC	3 cut(s)	857, 1423, 1596
HinfI	GANTC	5 cut(s)	162, 201, 559, 718, 1540
HphI	GGTGA	2 cut(s)	823, 1061
Hpy166II	GTNNAC	8 cut(s)	406, 857, 931, 1423, 1441, 1488, 1596, 1639
Hpy188I	TCNGA	6 cut(s)	78, 161, 973, 978, 1430, 1545
Hpy188III	TCNNGA	8 cut(s)	190, 427, 826, 842, 874, 1063, 1291, 1409
Hpy8I	GTNNAC	8 cut(s)	406, 857, 931, 1423, 1441, 1488, 1596, 1639
HpyAV	CCTTC	3 cut(s)	243, 588, 1376
HpyCH4III	ACNGT	6 cut(s)	469, 745, 1049, 1406, 1434, 1603
HpyCH4IV	ACGT	4 cut(s)	339, 491, 1015, 1053
HpyCH4V	TGCA	7 cut(s)	71, 175, 181, 315, 670, 1120, 1678
HpyF3I	CTNAG	2 cut(s)	1301, 1331
HpySE526I	ACGT	4 cut(s)	339, 491, 1015, 1053
Hsp92I	GRCGYC	5 cut(s)	339, 459, 1053, 1354, 1607
Hsp92II	CATG	6 cut(s)	181, 997, 1024, 1033, 1510, 1627
HspAI	GCGC	8 cut(s)	320, 900, 939, 1071, 1354, 1469, 1580, 1607
KasI	GGCGCC	2 cut(s)	1353, 1606
KspI	CCGCGG	1 cut(s)	457
Kzo9I	GATC	4 cut(s)	960, 973, 1104, 1362
LmnI	GCTCC	5 cut(s)	306, 395, 404, 822, 1251
Lsp1109I	GCAGC	5 cut(s)	193, 462, 938, 996, 1020
LweI	GCATC	4 cut(s)	165, 679, 804, 950
MaeI	CTAG	2 cut(s)	1241, 1472
MaeII	ACGT	4 cut(s)	339, 491, 1015, 1053
MaeIII	GTNAC	2 cut(s)	494, 1049
MalI	GATC	4 cut(s)	962, 975, 1106, 1364
MbiI	CCGCTC	1 cut(s)	823
MboI	GATC	4 cut(s)	960, 973, 1104, 1362
MboII	GAAGA	8 cut(s)	16, 29, 134, 137, 202, 685, 715, 1310
MflI	RGATCY	1 cut(s)	973
MhlI	GDGCHC	5 cut(s)	303, 392, 1149, 1337, 1589
MlsI	TGGCCA	1 cut(s)	1505
MluCI	AATT	2 cut(s)	755, 1412
MluNI	TGGCCA	1 cut(s)	1505
Mly113I	GGCGCC	2 cut(s)	1354, 1607
MlyI	GAGTC	3 cut(s)	171, 210, 1549
MmeI	TCCRAC	3 cut(s)	144, 261, 372
Mox20I	TGGCCA	1 cut(s)	1505
MscI	TGGCCA	1 cut(s)	1505
Msp20I	TGGCCA	1 cut(s)	1505
MspA1I	CMGCKG	3 cut(s)	456, 951, 1009
Mva1269I	GAATGC	1 cut(s)	1495
MvaI	CCWGG	5 cut(s)	771, 1307, 1449, 1614, 1653
MvnI	CGCG	9 cut(s)	320, 456, 527, 548, 576, 1073, 1103, 1469, 1582
NarI	GGCGCC	2 cut(s)	1354, 1607
NciI	CCSGG	6 cut(s)	794, 802, 920, 1112, 1124, 1338
NdeII	GATC	4 cut(s)	960, 973, 1104, 1362
NlaIII	CATG	6 cut(s)	181, 997, 1024, 1033, 1510, 1627
NmeAIII	GCCGAG	2 cut(s)	146, 1330
NmuCI	GTSAC	2 cut(s)	494, 1049
NspI	RCATGY	2 cut(s)	181, 1033
PctI	GAATGC	1 cut(s)	1495
PfeI	GAWTC	2 cut(s)	559, 718
Pfl23II	CGTACG	1 cut(s)	1401
PflMI	CCANNNNNTGG	1 cut(s)	1519
PinAI	ACCGGT	1 cut(s)	711
PleI	GAGTC	3 cut(s)	170, 209, 1548
PluTI	GGCGCC	2 cut(s)	1357, 1610
PmaCI	CACGTG	2 cut(s)	492, 1016
PmlI	CACGTG	2 cut(s)	492, 1016
PpsI	GAGTC	3 cut(s)	170, 209, 1548
Ppu21I	YACGTR	2 cut(s)	492, 1016
PpuMI	RGGWCCY	1 cut(s)	888
Psp124BI	GAGCTC	1 cut(s)	303
Psp5II	RGGWCCY	1 cut(s)	888
Psp6I	CCWGG	5 cut(s)	769, 1305, 1447, 1612, 1651
PspCI	CACGTG	2 cut(s)	492, 1016
PspGI	CCWGG	5 cut(s)	769, 1305, 1447, 1612, 1651
PspLI	CGTACG	1 cut(s)	1401
PspOMI	GGGCCC	1 cut(s)	1585
PspPI	GGNCC	7 cut(s)	230, 406, 469, 786, 888, 1585, 1586
PspPPI	RGGWCCY	1 cut(s)	888
PstNI	CAGNNNCTG	1 cut(s)	1663
PsuI	RGATCY	1 cut(s)	973
PvuII	CAGCTG	1 cut(s)	951
RsaI	GTAC	8 cut(s)	266, 545, 1133, 1202, 1271, 1328, 1403, 1442
RsaNI	GTAC	8 cut(s)	265, 544, 1132, 1201, 1270, 1327, 1402, 1441
SacI	GAGCTC	1 cut(s)	303
SacII	CCGCGG	1 cut(s)	457
SalI	GTCGAC	1 cut(s)	1594
Sau3AI	GATC	4 cut(s)	960, 973, 1104, 1362
Sau96I	GGNCC	7 cut(s)	230, 406, 469, 786, 888, 1585, 1586
ScaI	AGTACT	1 cut(s)	266
SchI	GAGTC	3 cut(s)	171, 210, 1549
SduI	GDGCHC	5 cut(s)	303, 392, 1149, 1337, 1589
SfaNI	GCATC	4 cut(s)	165, 679, 804, 950
SfoI	GGCGCC	2 cut(s)	1355, 1608
Sfr303I	CCGCGG	1 cut(s)	457
SgrBI	CCGCGG	1 cut(s)	457
SinI	GGWCC	4 cut(s)	406, 469, 786, 888
SmlI	CTYRAG	2 cut(s)	188, 824
SmoI	CTYRAG	2 cut(s)	188, 824
SpeI	ACTAGT	1 cut(s)	1240
Sse9I	AATT	2 cut(s)	755, 1412
SspDI	GGCGCC	2 cut(s)	1353, 1606
SspMI	CTAG	2 cut(s)	1241, 1472
SstI	GAGCTC	1 cut(s)	303
TaaI	ACNGT	6 cut(s)	469, 745, 1049, 1406, 1434, 1603
TaiI	ACGT	4 cut(s)	342, 494, 1018, 1056
TaqI	TCGA	8 cut(s)	213, 716, 726, 914, 1343, 1374, 1563, 1595
TaqII	GACCGA	1 cut(s)	1310
TasI	AATT	2 cut(s)	755, 1412
TatI	WGTACW	3 cut(s)	264, 1131, 1269
TfiI	GAWTC	2 cut(s)	559, 718
TscAI	CASTG	1 cut(s)	1443
TseFI	GTSAC	2 cut(s)	494, 1049
TseI	GCWGC	5 cut(s)	181, 450, 951, 1009, 1033
Tsp45I	GTSAC	2 cut(s)	494, 1049
TspDTI	ATGAA	3 cut(s)	845, 1523, 1621
TspGWI	ACGGA	8 cut(s)	138, 316, 391, 518, 647, 651, 1095, 1408
TspRI	CASTG	1 cut(s)	1443
Van91I	CCANNNNNTGG	1 cut(s)	1519
VpaK11BI	GGWCC	4 cut(s)	406, 469, 786, 888
XapI	RAATTY	2 cut(s)	755, 1412
XceI	RCATGY	2 cut(s)	181, 1033
XmiI	GTMKAC	2 cut(s)	930, 1595
XspI	CTAG	2 cut(s)	1241, 1472
ZraI	GACGTC	2 cut(s)	340, 1054
ZrmI	AGTACT	1 cut(s)	266

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.