Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0008580

Physical Location & Seq

Genomic Coordinates Forward (+)

61441658 .. 61443392

Gene Structure 1735 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00381480.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1653 bp

ATGGCTATATTCAAGAACCACGCCGCTTTTTCCACCGTCTTCTTCTACGTCTCCGCCACGCTCTTCTCCCTCTTCATCGCCTCCCCGGACTCCTACTTCAACGACATGTCGCCGGCGCCGGCTCCCACCGTGGCACCATACGACGGCGGGCAGTGGATTCTTCTCCACAAGAGCATAGGAGTCTCCGCAATGCACATGCAGCTTCTGAAGAACAGCAAGGTCATTCTAACCGTAACGGACTGCACCCCTCACTCTCTCTTATACGACGTCGCTTCGGACACCTTCCGCCCCTTGGTCGTGAAATCCGACACGTGGTGCTCGTCCGGCGCCGTGGACCCCAACGGCACGCTTGTCCAGACGGGTGGTTACGGCACTGGGATTCAAGCGATCAGGACTTTCACGCCGTGCGACGATGACACGTGTCAGTGGGTCGAGCTGGGTGTGAAGCTGTTGGCGCAGAGGTGGTACGCGACTAACCAGATTCTCCCCGACGGCCGCGTCATTGTCGTCGGCGGAAGGCGGGCTTTCAACTACGAGTTTTATCCCAAGGCGGACGACAAGTCGTCCAAGCTTTACAAAATGAGGTTCTTGAGGGAGACGACGGACTTTTACGAGGAGAACAATCTTTATCCGTTCTTGCATCTCTTGCCGGACGGCAACCTCTTCATTTTCGCCAACAACCGCTCGATTCTCTTCGACTATAACAACAACACCGTCATCAAGGAGTTTCCGGCGATGCCCGGTGGTGTCAAGCGGTCCTACCCGGCGACCGGGTCGTCTGTGATGCTCCCACTCAAGATGAACGGAGTTCTTGACAATTCGGGTCAACCCGAAGTGGAAATCTTGATTTGCGGCGGGTCCTACGGCGGCGCTTACTACAAATCGAACCGGGAGAAAGTGTACATCGGCGCATCCGCCAGCTGCGGCCGGATCAAGCTCTCGCATCCGAACCCGAAATGGGTCATGGAGGAAATGCCGCTGCCACGTGTCATGGGCGACATGCTGCTCTTGCCGAACGGTGACGTCCTCATCCTGAACGGCGCGGCGAACGGAACGGCAGGGTGGGAGGACGCGATCAACCCGGTTTTGCACCCGGTGCTGTACAAGACCTACGAGCCCGACTCGAGTCGCCGGTTTGTGATACTGAACCCGACCACAATCCGCAGAATGTACCACTCCTCGTGTTTGCTGTTGCCAGATGGCAGAATACTAGTGGGCGGGAGCAACCCCCACGAAATGTACAACTTCAGGCGAGCTTTCCCGACCGAGCTGAGCCTGGAGGCGTATCTTCCGCCGTACCTGAGCCCCAGCTCGGCCCCTCTGCGCCCTACGATCATATCCATCGAAGCAGAAGGAGGGAACATCGTATCGTACGGTCAGGAATTCTCCGTCAACTTCGGACTGTCAGTGTACCGGCCTGGGGTGGCGATAACCGTCGCGCTCGTTTCGCCGTCGTTTACGACGCATTCGCTGGCCATGAACCAGAGGGTGGTGGTTTTGGAGGTAGCGAGTCTGAAGCGTTTGTCTGTTTTCGATTACAAGATTACGGCGCGGGGCCCGCCGTCGACCAACGTGGCGCCACCTGGGTATTACATGATATTCATTGTCCACGCTGGAGTTCCAGGTCAGGCTCTGTGGGTCAAGTTGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1929 Glyoxal_oxid_N

Protein Analysis

550

Amino Acids

60.72

Weight (kDa)

8.03

Isoelectric Point (pI)

47.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyoxal_oxid_N	PF07250	72 - 433	4.4e-162	Glyoxal oxidase N-terminus
GO-like_E_set	PF09118	442 - 548	2.1e-27	Galactose oxidase-like, Early set domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008580)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14430
fragaria_vesca	FvH4_4g31980 FvH4_4g31981
malus_domestica	MD13G1079200.v1.1 MD16G1079000.v1.1
prunus_persica	Prupe.1G267600_v2.0.a1
pyrus_communis	pycom13g06890
rosa_chinensis	RchiOBHm_Chr4g0440661 RchiOBHm_Chr4g0440671
rosa_laevigata	RLG00000006160 RLG00000006162
rosa_multiflora	Rmu_co8109046.1_g000001 Rmu_sc0008018.1_g000009 Rmu_sc0008018.1_g000010 Rmu_sc0032009.1_g000002
rosa_roxburghii	Rroxscaffold_5G00381470 Rroxscaffold_5G00381480
rosa_rugosa	Rorug04G0327500 Rorug04G0327500
rosa_samantha	Rh4CG406500 Rh4CG406600 Rh4CG406700
rosa_wichuraiana	Rw4G032610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	497, 775
AatII	GACGTC	2 cut(s)	270, 1026
AccB1I	GGYRCC	4 cut(s)	115, 133, 326, 1576
AccB7I	CCANNNNNTGG	1 cut(s)	1489
AccBSI	CCGCTC	1 cut(s)	684
AccI	GTMKAC	1 cut(s)	1565
AccII	CGCG	6 cut(s)	470, 498, 1043, 1073, 1439, 1552
AclWI	GGATC	1 cut(s)	938
AcoI	YGGCCR	3 cut(s)	493, 925, 1473
AcsI	RAATTY	1 cut(s)	1382
AcuI	CTGAAG	3 cut(s)	227, 1231, 1535
AcvI	CACGTG	3 cut(s)	312, 420, 986
AcyI	GRCGYC	5 cut(s)	116, 267, 327, 1023, 1577
AdeI	CACNNNGTG	3 cut(s)	315, 405, 1096
AfaI	GTAC	8 cut(s)	467, 902, 1103, 1172, 1241, 1298, 1373, 1412
AfiI	CCNNNNNNNGG	8 cut(s)	143, 292, 312, 770, 958, 1312, 1420, 1489
AflIII	ACRYGT	5 cut(s)	105, 309, 417, 419, 985
AgsI	TTSAA	4 cut(s)	13, 100, 383, 529
AhdI	GACNNNNNGTC	2 cut(s)	559, 562
AhlI	ACTAGT	1 cut(s)	1210
AjnI	CCWGG	4 cut(s)	1275, 1417, 1582, 1621
AluBI	AGCT	9 cut(s)	202, 436, 448, 571, 921, 937, 1256, 1270, 1311
AluI	AGCT	9 cut(s)	202, 436, 448, 571, 921, 937, 1256, 1270, 1311
Alw21I	GWGCWC	1 cut(s)	320
Alw26I	GTCTC	3 cut(s)	55, 187, 590
AlwI	GGATC	1 cut(s)	938
AlwNI	CAGNNNCTG	2 cut(s)	205, 1633
Ama87I	CYCGRG	1 cut(s)	1123
AoxI	GGCC	6 cut(s)	493, 925, 1314, 1415, 1473, 1555
ApaI	GGGCCC	1 cut(s)	1559
ApeKI	GCWGC	4 cut(s)	199, 921, 979, 1003
ApoI	RAATTY	1 cut(s)	1382
AspS9I	GGNCC	6 cut(s)	334, 756, 858, 1315, 1555, 1556
AsuC2I	CCSGG	7 cut(s)	86, 741, 764, 772, 890, 1082, 1094
AsuHPI	GGTGA	1 cut(s)	1031
AvaI	CYCGRG	1 cut(s)	1123
AvaII	GGWCC	3 cut(s)	334, 756, 858
BaeGI	GKGCMC	1 cut(s)	1559
BalI	TGGCCA	1 cut(s)	1475
BanI	GGYRCC	4 cut(s)	115, 133, 326, 1576
BanII	GRGCYC	3 cut(s)	1119, 1307, 1559
BauI	CACGAG	1 cut(s)	1180
BbrPI	CACGTG	3 cut(s)	312, 420, 986
BbsI	GAAGAC	1 cut(s)	31
Bbv12I	GWGCWC	1 cut(s)	320
BbvI	GCAGC	4 cut(s)	211, 908, 966, 990
BccI	CCATC	2 cut(s)	1193, 1349
BciT130I	CCWGG	4 cut(s)	1277, 1419, 1584, 1623
BcnI	CCSGG	7 cut(s)	86, 741, 764, 772, 890, 1082, 1094
BcoDI	GTCTC	3 cut(s)	55, 187, 590
BcuI	ACTAGT	1 cut(s)	1210
BfaI	CTAG	1 cut(s)	1211
BfoI	RGCGCY	4 cut(s)	119, 330, 873, 1580
BlpI	GCTNAGC	1 cut(s)	1271
Bme18I	GGWCC	3 cut(s)	334, 756, 858
BmeRI	GACNNNNNGTC	2 cut(s)	559, 562
BmeT110I	CYCGRG	1 cut(s)	1123
BmgT120I	GGNCC	6 cut(s)	334, 756, 858, 1315, 1555, 1556
BmrI	ACTGGG	1 cut(s)	384
BmsI	GCATC	5 cut(s)	649, 726, 774, 920, 952
BmuI	ACTGGG	1 cut(s)	384
BoxI	GACNNNNGTC	2 cut(s)	420, 1125
BpiI	GAAGAC	1 cut(s)	31
BplI	GAGNNNNNCTC	2 cut(s)	1106, 1138
BpmI	CTGGAG	2 cut(s)	1298, 1635
Bpu10I	CCTNAGC	1 cut(s)	1301
Bpu1102I	GCTNAGC	1 cut(s)	1271
BpuEI	CTTGAG	2 cut(s)	610, 779
BpuMI	CCSGG	7 cut(s)	86, 741, 764, 772, 890, 1082, 1094
BsaAI	YACGTR	3 cut(s)	312, 420, 986
BsaHI	GRCGYC	5 cut(s)	116, 267, 327, 1023, 1577
BsaJI	CCNNGG	7 cut(s)	84, 129, 291, 330, 546, 1418, 1583
BsaXI	ACNNNNNCTCC	2 cut(s)	884, 914
Bsc4I	CCNNNNNNNGG	8 cut(s)	143, 292, 312, 770, 958, 1312, 1420, 1489
Bse118I	RCCGGY	4 cut(s)	112, 118, 1131, 1413
Bse1I	ACTGG	1 cut(s)	379
Bse3DI	GCAATG	1 cut(s)	195
BseBI	CCWGG	4 cut(s)	1277, 1419, 1584, 1623
BseDI	CCNNGG	7 cut(s)	84, 129, 291, 330, 546, 1418, 1583
BseGI	GGATG	3 cut(s)	911, 943, 1029
BseLI	CCNNNNNNNGG	8 cut(s)	143, 292, 312, 770, 958, 1312, 1420, 1489
BseMI	GCAATG	1 cut(s)	195
BseMII	CTCAG	2 cut(s)	1262, 1292
BseNI	ACTGG	1 cut(s)	379
BseRI	GAGGAG	2 cut(s)	629, 1168
BseSI	GKGCMC	1 cut(s)	1559
BseX3I	CGGCCG	2 cut(s)	493, 925
BseXI	GCAGC	4 cut(s)	211, 908, 966, 990
BseYI	CCCAGC	2 cut(s)	436, 1307
BsgI	GTGCAG	1 cut(s)	226
Bsh1236I	CGCG	6 cut(s)	470, 498, 1043, 1073, 1439, 1552
Bsh1285I	CGRYCG	4 cut(s)	496, 771, 928, 1266
BshFI	GGCC	6 cut(s)	495, 927, 1316, 1417, 1475, 1557
BshNI	GGYRCC	4 cut(s)	115, 133, 326, 1576
BsiEI	CGRYCG	4 cut(s)	496, 771, 928, 1266
BsiHKAI	GWGCWC	1 cut(s)	320
BsiHKCI	CYCGRG	1 cut(s)	1123
BsiWI	CGTACG	1 cut(s)	1371
BslI	CCNNNNNNNGG	8 cut(s)	143, 292, 312, 770, 958, 1312, 1420, 1489
BsmAI	GTCTC	3 cut(s)	55, 187, 590
BsmBI	CGTCTC	2 cut(s)	55, 590
BsmI	GAATGC	1 cut(s)	1465
BsnI	GGCC	6 cut(s)	495, 927, 1316, 1417, 1475, 1557
BsoBI	CYCGRG	1 cut(s)	1123
Bsp120I	GGGCCC	1 cut(s)	1555
Bsp1286I	GDGCHC	4 cut(s)	320, 1119, 1307, 1559
Bsp1407I	TGTACA	3 cut(s)	900, 1101, 1239
Bsp143I	GATC	4 cut(s)	387, 930, 1074, 1332
Bsp1720I	GCTNAGC	1 cut(s)	1271
BspANI	GGCC	6 cut(s)	495, 927, 1316, 1417, 1475, 1557
BspCNI	CTCAG	2 cut(s)	1263, 1293
BspFNI	CGCG	6 cut(s)	470, 498, 1043, 1073, 1439, 1552
BspPI	GGATC	1 cut(s)	938
BspQI	GCTCTTC	1 cut(s)	68
BspT107I	GGYRCC	4 cut(s)	115, 133, 326, 1576
BsrBI	CCGCTC	1 cut(s)	684
BsrDI	GCAATG	1 cut(s)	195
BsrFI	RCCGGY	4 cut(s)	112, 118, 1131, 1413
BsrGI	TGTACA	3 cut(s)	900, 1101, 1239
BsrI	ACTGG	1 cut(s)	379
BssAI	RCCGGY	4 cut(s)	112, 118, 1131, 1413
BssECI	CCNNGG	7 cut(s)	84, 129, 291, 330, 546, 1418, 1583
BssMI	GATC	4 cut(s)	387, 930, 1074, 1332
BssNI	GRCGYC	5 cut(s)	116, 267, 327, 1023, 1577
BssSI	CACGAG	1 cut(s)	1180
BssT1I	CCWWGG	2 cut(s)	291, 546
Bst2BI	CACGAG	1 cut(s)	1180
Bst2UI	CCWGG	4 cut(s)	1277, 1419, 1584, 1623
Bst4CI	ACNGT	8 cut(s)	37, 130, 232, 715, 1019, 1376, 1404, 1435
Bst6I	CTCTTC	4 cut(s)	68, 77, 668, 698
BstACI	GRCGYC	5 cut(s)	116, 267, 327, 1023, 1577
BstAPI	GCANNNNNTGC	2 cut(s)	646, 1096
BstAUI	TGTACA	3 cut(s)	900, 1101, 1239
BstBAI	YACGTR	3 cut(s)	312, 420, 986
BstC8I	GCNNGC	9 cut(s)	114, 120, 149, 347, 522, 919, 1254, 1473, 1559
BstDEI	CTNAG	2 cut(s)	1271, 1301
BstDSI	CCRYGG	2 cut(s)	129, 330
BstF5I	GGATG	3 cut(s)	911, 943, 1029
BstFNI	CGCG	6 cut(s)	470, 498, 1043, 1073, 1439, 1552
BstH2I	RGCGCY	4 cut(s)	119, 330, 873, 1580
BstKTI	GATC	4 cut(s)	390, 933, 1077, 1335
BstMAI	GTCTC	3 cut(s)	55, 187, 590
BstMBI	GATC	4 cut(s)	387, 930, 1074, 1332
BstMCI	CGRYCG	4 cut(s)	496, 771, 928, 1266
BstMWI	GCNNNNNNNGC	8 cut(s)	199, 324, 454, 646, 1009, 1096, 1447, 1558
BstNI	CCWGG	4 cut(s)	1277, 1419, 1584, 1623
BstNSI	RCATGY	3 cut(s)	109, 199, 1003
BstPAI	GACNNNNGTC	2 cut(s)	420, 1125
BstSLI	GKGCMC	1 cut(s)	1559
BstUI	CGCG	6 cut(s)	470, 498, 1043, 1073, 1439, 1552
BstV1I	GCAGC	4 cut(s)	211, 908, 966, 990
BstV2I	GAAGAC	1 cut(s)	31
BstXI	CCANNNNNNTGG	1 cut(s)	362
BstZI	CGGCCG	2 cut(s)	493, 925
BsuRI	GGCC	6 cut(s)	495, 927, 1316, 1417, 1475, 1557
BtgI	CCRYGG	2 cut(s)	129, 330
BtgZI	GCGATG	2 cut(s)	61, 749
BtsCI	GGATG	3 cut(s)	911, 943, 1029
BtsI	GCAGTG	1 cut(s)	158
BtsIMutI	CAGTG	4 cut(s)	158, 372, 431, 1413
Cac8I	GCNNGC	9 cut(s)	114, 120, 149, 347, 522, 919, 1254, 1473, 1559
CaiI	CAGNNNCTG	2 cut(s)	205, 1633
Cfr10I	RCCGGY	4 cut(s)	112, 118, 1131, 1413
Cfr13I	GGNCC	6 cut(s)	334, 756, 858, 1315, 1555, 1556
CseI	GACGC	3 cut(s)	487, 1079, 1471
Csp6I	GTAC	8 cut(s)	466, 901, 1102, 1171, 1240, 1297, 1372, 1411
CviAII	CATG	7 cut(s)	106, 196, 964, 991, 1000, 1477, 1594
CviQI	GTAC	8 cut(s)	466, 901, 1102, 1171, 1240, 1297, 1372, 1411
DdeI	CTNAG	2 cut(s)	1271, 1301
DinI	GGCGCC	3 cut(s)	117, 328, 1578
DpnI	GATC	4 cut(s)	389, 932, 1076, 1334
DpnII	GATC	4 cut(s)	387, 930, 1074, 1332
DraIII	CACNNNGTG	3 cut(s)	315, 405, 1096
DrdI	GACNNNNNNGTC	2 cut(s)	497, 775
DriI	GACNNNNNGTC	2 cut(s)	559, 562
DseDI	GACNNNNNNGTC	2 cut(s)	497, 775
EaeI	YGGCCR	3 cut(s)	493, 925, 1473
EagI	CGGCCG	2 cut(s)	493, 925
Eam1104I	CTCTTC	4 cut(s)	68, 77, 668, 698
Eam1105I	GACNNNNNGTC	2 cut(s)	559, 562
EarI	CTCTTC	4 cut(s)	68, 77, 668, 698
EciI	GGCGGA	6 cut(s)	43, 275, 528, 566, 904, 1281
EclXI	CGGCCG	2 cut(s)	493, 925
Eco130I	CCWWGG	2 cut(s)	291, 546
Eco24I	GRGCYC	3 cut(s)	1119, 1307, 1559
Eco47I	GGWCC	3 cut(s)	334, 756, 858
Eco52I	CGGCCG	2 cut(s)	493, 925
Eco57I	CTGAAG	3 cut(s)	227, 1231, 1535
Eco72I	CACGTG	3 cut(s)	312, 420, 986
Eco88I	CYCGRG	1 cut(s)	1123
EcoO109I	RGGNCCY	2 cut(s)	858, 1555
EcoRI	GAATTC	1 cut(s)	1382
EcoRII	CCWGG	4 cut(s)	1275, 1417, 1582, 1621
EcoT14I	CCWWGG	2 cut(s)	291, 546
EcoT38I	GRGCYC	3 cut(s)	1119, 1307, 1559
EgeI	GGCGCC	3 cut(s)	117, 328, 1578
EheI	GGCGCC	3 cut(s)	117, 328, 1578
ErhI	CCWWGG	2 cut(s)	291, 546
Esp3I	CGTCTC	2 cut(s)	55, 590
FaeI	CATG	7 cut(s)	109, 199, 967, 994, 1003, 1480, 1597
FalI	AAGNNNNNCTT	2 cut(s)	508, 540
FatI	CATG	7 cut(s)	105, 195, 963, 990, 999, 1476, 1593
FauI	CCCGC	6 cut(s)	140, 513, 848, 1211, 1545, 1566
FblI	GTMKAC	1 cut(s)	1565
FokI	GGATG	3 cut(s)	898, 930, 1016
FriOI	GRGCYC	3 cut(s)	1119, 1307, 1559
FspBI	CTAG	1 cut(s)	1211
GsaI	CCCAGC	2 cut(s)	440, 1311
GsuI	CTGGAG	2 cut(s)	1298, 1635
HaeII	RGCGCY	4 cut(s)	119, 330, 873, 1580
HaeIII	GGCC	6 cut(s)	495, 927, 1316, 1417, 1475, 1557
HgaI	GACGC	3 cut(s)	487, 1079, 1471
Hin1I	GRCGYC	5 cut(s)	116, 267, 327, 1023, 1577
Hin1II	CATG	7 cut(s)	109, 199, 967, 994, 1003, 1480, 1597
HincII	GTYRAC	3 cut(s)	827, 1393, 1566
HindII	GTYRAC	3 cut(s)	827, 1393, 1566
HindIII	AAGCTT	1 cut(s)	569
HinfI	GANTC	9 cut(s)	89, 157, 180, 379, 481, 688, 1121, 1126, 1510
HphI	GGTGA	1 cut(s)	1031
Hpy166II	GTNNAC	8 cut(s)	334, 827, 901, 1393, 1411, 1458, 1566, 1609
Hpy188I	TCNGA	6 cut(s)	207, 277, 307, 948, 1400, 1515
Hpy8I	GTNNAC	8 cut(s)	334, 827, 901, 1393, 1411, 1458, 1566, 1609
HpyAV	CCTTC	3 cut(s)	292, 510, 1346
HpyCH4III	ACNGT	8 cut(s)	37, 130, 232, 715, 1019, 1376, 1404, 1435
HpyCH4IV	ACGT	7 cut(s)	48, 267, 311, 419, 985, 1023, 1572
HpyCH4V	TGCA	6 cut(s)	193, 199, 243, 640, 1090, 1648
HpyF10VI	GCNNNNNNNGC	8 cut(s)	199, 324, 454, 646, 1009, 1096, 1447, 1558
HpyF3I	CTNAG	2 cut(s)	1271, 1301
HpySE526I	ACGT	7 cut(s)	48, 267, 311, 419, 985, 1023, 1572
Hsp92I	GRCGYC	5 cut(s)	116, 267, 327, 1023, 1577
Hsp92II	CATG	7 cut(s)	109, 199, 967, 994, 1003, 1480, 1597
KasI	GGCGCC	3 cut(s)	115, 326, 1576
KroI	GCCGGC	2 cut(s)	112, 118
KroNI	GCCGGC	2 cut(s)	114, 120
Kzo9I	GATC	4 cut(s)	387, 930, 1074, 1332
LguI	GCTCTTC	1 cut(s)	68
LmnI	GCTCC	3 cut(s)	127, 792, 1221
Lsp1109I	GCAGC	4 cut(s)	211, 908, 966, 990
LweI	GCATC	5 cut(s)	649, 726, 774, 920, 952
MaeI	CTAG	1 cut(s)	1211
MaeII	ACGT	7 cut(s)	48, 267, 311, 419, 985, 1023, 1572
MaeIII	GTNAC	3 cut(s)	232, 365, 1019
MalI	GATC	4 cut(s)	389, 932, 1076, 1334
MbiI	CCGCTC	1 cut(s)	684
MboI	GATC	4 cut(s)	387, 930, 1074, 1332
MboII	GAAGA	9 cut(s)	31, 34, 55, 64, 152, 220, 655, 685, 1280
MhlI	GDGCHC	4 cut(s)	320, 1119, 1307, 1559
MlsI	TGGCCA	1 cut(s)	1475
MluCI	AATT	2 cut(s)	817, 1382
MluNI	TGGCCA	1 cut(s)	1475
Mly113I	GGCGCC	3 cut(s)	116, 327, 1577
MlyI	GAGTC	5 cut(s)	83, 189, 1115, 1135, 1519
MmeI	TCCRAC	1 cut(s)	330
Mox20I	TGGCCA	1 cut(s)	1475
MreI	CGCCGGCG	1 cut(s)	112
MroNI	GCCGGC	2 cut(s)	112, 118
MscI	TGGCCA	1 cut(s)	1475
Msp20I	TGGCCA	1 cut(s)	1475
MspA1I	CMGCKG	2 cut(s)	921, 979
Mva1269I	GAATGC	1 cut(s)	1465
MvaI	CCWGG	4 cut(s)	1277, 1419, 1584, 1623
MvnI	CGCG	6 cut(s)	470, 498, 1043, 1073, 1439, 1552
MwoI	GCNNNNNNNGC	8 cut(s)	199, 324, 454, 646, 1009, 1096, 1447, 1558
NaeI	GCCGGC	2 cut(s)	114, 120
NarI	GGCGCC	3 cut(s)	116, 327, 1577
NciI	CCSGG	7 cut(s)	86, 741, 764, 772, 890, 1082, 1094
NdeII	GATC	4 cut(s)	387, 930, 1074, 1332
NgoMIV	GCCGGC	2 cut(s)	112, 118
NlaIII	CATG	7 cut(s)	109, 199, 967, 994, 1003, 1480, 1597
NmeAIII	GCCGAG	1 cut(s)	1292
NmuCI	GTSAC	1 cut(s)	1019
NspI	RCATGY	3 cut(s)	109, 199, 1003
PaeR7I	CTCGAG	1 cut(s)	1123
PciI	ACATGT	1 cut(s)	105
PciSI	GCTCTTC	1 cut(s)	68
PcsI	WCGNNNNNNNCGW	2 cut(s)	303, 317
PctI	GAATGC	1 cut(s)	1465
PdiI	GCCGGC	2 cut(s)	114, 120
PfeI	GAWTC	4 cut(s)	157, 379, 481, 688
Pfl23II	CGTACG	1 cut(s)	1371
PflFI	GACNNNGTC	1 cut(s)	772
PflMI	CCANNNNNTGG	1 cut(s)	1489
PleI	GAGTC	5 cut(s)	83, 188, 1115, 1134, 1518
PluTI	GGCGCC	3 cut(s)	119, 330, 1580
PmaCI	CACGTG	3 cut(s)	312, 420, 986
PmlI	CACGTG	3 cut(s)	312, 420, 986
PpsI	GAGTC	5 cut(s)	83, 188, 1115, 1134, 1518
Ppu21I	YACGTR	3 cut(s)	312, 420, 986
PpuMI	RGGWCCY	1 cut(s)	858
PscI	ACATGT	1 cut(s)	105
PshAI	GACNNNNGTC	2 cut(s)	420, 1125
Psp5II	RGGWCCY	1 cut(s)	858
Psp6I	CCWGG	4 cut(s)	1275, 1417, 1582, 1621
PspCI	CACGTG	3 cut(s)	312, 420, 986
PspFI	CCCAGC	2 cut(s)	436, 1307
PspGI	CCWGG	4 cut(s)	1275, 1417, 1582, 1621
PspLI	CGTACG	1 cut(s)	1371
PspOMI	GGGCCC	1 cut(s)	1555
PspPI	GGNCC	6 cut(s)	334, 756, 858, 1315, 1555, 1556
PspPPI	RGGWCCY	1 cut(s)	858
PspXI	VCTCGAGB	1 cut(s)	1123
PstNI	CAGNNNCTG	2 cut(s)	205, 1633
PsyI	GACNNNGTC	1 cut(s)	772
PvuII	CAGCTG	1 cut(s)	921
RsaI	GTAC	8 cut(s)	467, 902, 1103, 1172, 1241, 1298, 1373, 1412
RsaNI	GTAC	8 cut(s)	466, 901, 1102, 1171, 1240, 1297, 1372, 1411
SalI	GTCGAC	1 cut(s)	1564
SapI	GCTCTTC	1 cut(s)	68
Sau3AI	GATC	4 cut(s)	387, 930, 1074, 1332
Sau96I	GGNCC	6 cut(s)	334, 756, 858, 1315, 1555, 1556
SchI	GAGTC	5 cut(s)	83, 189, 1115, 1135, 1519
SduI	GDGCHC	4 cut(s)	320, 1119, 1307, 1559
SfaNI	GCATC	5 cut(s)	649, 726, 774, 920, 952
SfoI	GGCGCC	3 cut(s)	117, 328, 1578
Sfr274I	CTCGAG	1 cut(s)	1123
SgrAI	CRCCGGYG	1 cut(s)	112
SinI	GGWCC	3 cut(s)	334, 756, 858
SlaI	CTCGAG	1 cut(s)	1123
SmlI	CTYRAG	3 cut(s)	589, 794, 1123
SmoI	CTYRAG	3 cut(s)	589, 794, 1123
SpeI	ACTAGT	1 cut(s)	1210
Sse9I	AATT	2 cut(s)	817, 1382
SspDI	GGCGCC	3 cut(s)	115, 326, 1576
SspMI	CTAG	1 cut(s)	1211
StyI	CCWWGG	2 cut(s)	291, 546
TaaI	ACNGT	8 cut(s)	37, 130, 232, 715, 1019, 1376, 1404, 1435
TaiI	ACGT	7 cut(s)	51, 270, 314, 422, 988, 1026, 1575
TaqI	TCGA	8 cut(s)	432, 686, 696, 884, 1124, 1344, 1533, 1565
TaqII	GACCGA	1 cut(s)	1280
TasI	AATT	2 cut(s)	817, 1382
TatI	WGTACW	3 cut(s)	900, 1101, 1239
TauI	GCSGC	7 cut(s)	26, 498, 855, 870, 927, 979, 1046
TfiI	GAWTC	4 cut(s)	157, 379, 481, 688
TscAI	CASTG	4 cut(s)	158, 379, 431, 1413
TseFI	GTSAC	1 cut(s)	1019
TseI	GCWGC	4 cut(s)	199, 921, 979, 1003
Tsp45I	GTSAC	1 cut(s)	1019
TspDTI	ATGAA	5 cut(s)	64, 655, 815, 1493, 1591
TspGWI	ACGGA	6 cut(s)	251, 617, 621, 819, 1065, 1378
TspRI	CASTG	4 cut(s)	158, 379, 431, 1413
Tth111I	GACNNNGTC	1 cut(s)	772
Van91I	CCANNNNNTGG	1 cut(s)	1489
VpaK11BI	GGWCC	3 cut(s)	334, 756, 858
XapI	RAATTY	1 cut(s)	1382
XceI	RCATGY	3 cut(s)	109, 199, 1003
XhoI	CTCGAG	1 cut(s)	1123
XmiI	GTMKAC	1 cut(s)	1565
XspI	CTAG	1 cut(s)	1211
ZraI	GACGTC	2 cut(s)	268, 1024

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.