Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0008580

Physical Location & Seq

Genomic Coordinates Forward (+)

65348828 .. 65350970

Gene Structure 2143 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG406700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGGCTATATTCAAGAACCACGCCGCTTTTTCCACCGTCTTCTTCTACGTCTCCGCCACCCTCTTCTCCCTCTTCATCGCCTCCCCGGACTCCTACTTCAACGACATGTCCCCGGCGCCGGCTCCCACCGTGGCACCATACGACGGCGGGCAGTGGATTCTTCTCCACAAGAGCATAGGAGTCTCCGCAATGCACATGCAGCTTCTGAAGAACAACAAGGTCATTCTGTTTGACCGAACCGACATGGGGCCCTCCAACGCCACGTACCCCCCCGGCGCCGTTCAATGCCGCAACTACACCGTCCGTAACAGAACCGTAACGGACTGCACCCCGCACTCTCTCTTATACGACGTCGCTTCGGACACCTTCCGCCCCTTGGTCGTGAAATCCGACACGTGGTGCTCGTCCGGCGCGGTGGACCCCAACGGCACGCTTGTCCAGACGGGTGGTTACGGCACTGGGATTCAAGCGATCAGGACCTTCACGCCGTGCGACGACGACGACACGTGTCAGTGGGTCGAGCTGGGTGTGAAGCTGTTGGCGCAGAGGTGGTACGCGACTAACCAGATTCTCCCCGACGGCCGCGTCATTGTCGTCGGCGGAAGGCGGGCTTTCAACTACGAGTTTTATCCCAAGGCGGACGACAAGTCGTCCAAGCTTTACAACATGAGGTTCTTGTGGGAGACGAAGGACTTTTACGAGGAGAACAATCTTTATCCGTTCTTGCATCTCTTGCCCGACGGCAACCTCTTCGTTTTCGCCAACAACCGGTCGATTCTCTTCGACTACAATAACAACACCGTCGTCAAGAAGTTTCCGGCGATGCCAGGCGGTGTCAAGAGGTCCTACCCGGCCACCGGGTCGTCCGTGATGCTCCCACTCAAGATGAACGGAGTTCTTGACAATTCGGGTCAACCCGAGGTGGAAATCTTGATTTGCGGCGGGTCGTACGGCGGCGCTTACTACAAATCGAACCGGGAGAAAGTGTACATCGGCGCATCCGCCAGCTGCGGCCGGATCAAGCTCTCGGATCCGAACCCGAACTGGGTGATGGAGGAAATGCCGCTGCCACGTGTCATGGGCGACATGCTGCTCTTGCCGAACGGTGACGTTCTCATCCTGAACGGCGCGGCGAACGGAACGGCAGGGTGGGAGGACGCGATCAACCCGGTTTTGCACCCGGTGCTGTACAAGACCTACGAGCCCGACCCGAGTCGCCGGTTTGTGATACTGAACCCGACCACAATCCCCAGAATGTACCACTCCTCGTGTTTGCTGTTGCCAGATGGCAGAATACTAGTGGGAGGGAGCAACCCCCACCAAATGTACAACTTCAGGCGAGCTTTCCCGACCGAGCTGAGCCTGGAGGCGTATCTTCCGCCGTACCTGAGCCCCAGCTCGGCCCCTCTGCGCCCTACGATCATATCCATCGAAGCAGAAGGAGGGAACATCGTATCTTACGGTCAGGAATTCTCCGTCAACTTCGGACTGTCAGTGTACCGGCCTGGGGTGGCGATAACCGTCGCGCTCGTTTCGCCGTCGTTTACGACGCATTCGCTGGCCATGAACCAGAGGGTGGTGGTTTTGGAGGTAGCGAGTCTGAAGCGTTTGTCTGTTTTCGATTACAAGATTACGGCGCGGGGCCCGCTGTCGACATCCGTGGCGCCACCTGGGTATTACATGATATTAATTGTCCACGCTGGAGTTCCAGGTCAGGCTCTGTGGGTCAAGGTGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1929 Glyoxal_oxid_N

Protein Analysis

579

Amino Acids

63.9

Weight (kDa)

7.99

Isoelectric Point (pI)

44.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyoxal_oxid_N	PF07250	64 - 462	7.4e-175	Glyoxal oxidase N-terminus
GO-like_E_set	PF09118	471 - 578	1.5e-24	Galactose oxidase-like, Early set domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008580)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14430
fragaria_vesca	FvH4_4g31980 FvH4_4g31981
malus_domestica	MD13G1079200.v1.1 MD16G1079000.v1.1
prunus_persica	Prupe.1G267600_v2.0.a1
pyrus_communis	pycom13g06890
rosa_chinensis	RchiOBHm_Chr4g0440661 RchiOBHm_Chr4g0440671
rosa_laevigata	RLG00000006160 RLG00000006162
rosa_multiflora	Rmu_co8109046.1_g000001 Rmu_sc0008018.1_g000009 Rmu_sc0008018.1_g000010 Rmu_sc0032009.1_g000002
rosa_roxburghii	Rroxscaffold_5G00381470 Rroxscaffold_5G00381480
rosa_rugosa	Rorug04G0327500 Rorug04G0327500
rosa_samantha	Rh4CG406500 Rh4CG406600 Rh4CG406700
rosa_wichuraiana	Rw4G032610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	584
AatII	GACGTC	1 cut(s)	354
AccB1I	GGYRCC	4 cut(s)	115, 133, 275, 1663
AccB7I	CCANNNNNTGG	1 cut(s)	1576
AccI	GTMKAC	1 cut(s)	1652
AccII	CGCG	7 cut(s)	413, 557, 585, 1130, 1160, 1526, 1639
AclWI	GGATC	3 cut(s)	1025, 1025, 1038
AcoI	YGGCCR	4 cut(s)	580, 852, 1012, 1560
AcsI	RAATTY	1 cut(s)	1469
AcuI	CTGAAG	3 cut(s)	227, 1318, 1622
AcvI	CACGTG	3 cut(s)	396, 507, 1073
AcyI	GRCGYC	4 cut(s)	116, 276, 351, 1664
AdeI	CACNNNGTG	3 cut(s)	399, 489, 1183
AfaI	GTAC	9 cut(s)	266, 554, 950, 989, 1190, 1259, 1328, 1385, 1499
AflIII	ACRYGT	5 cut(s)	105, 393, 504, 506, 1072
AgeI	ACCGGT	1 cut(s)	768
AgsI	TTSAA	5 cut(s)	13, 100, 284, 467, 616
AhdI	GACNNNNNGTC	2 cut(s)	646, 649
AhlI	ACTAGT	1 cut(s)	1297
AjnI	CCWGG	5 cut(s)	826, 1362, 1504, 1669, 1708
AluBI	AGCT	9 cut(s)	202, 523, 535, 658, 1008, 1024, 1343, 1357, 1398
AluI	AGCT	9 cut(s)	202, 523, 535, 658, 1008, 1024, 1343, 1357, 1398
Alw21I	GWGCWC	1 cut(s)	404
Alw26I	GTCTC	3 cut(s)	55, 187, 677
AlwI	GGATC	3 cut(s)	1025, 1025, 1038
AlwNI	CAGNNNCTG	2 cut(s)	205, 1720
Ama87I	CYCGRG	2 cut(s)	917, 1210
AoxI	GGCC	8 cut(s)	248, 580, 852, 1012, 1401, 1502, 1560, 1642
ApaI	GGGCCC	2 cut(s)	252, 1646
ApeKI	GCWGC	4 cut(s)	199, 1008, 1066, 1090
ApoI	RAATTY	1 cut(s)	1469
AseI	ATTAAT	1 cut(s)	1688
AsiGI	ACCGGT	1 cut(s)	768
AspS9I	GGNCC	8 cut(s)	248, 249, 418, 477, 843, 1402, 1642, 1643
AsuC2I	CCSGG	8 cut(s)	86, 113, 273, 851, 859, 977, 1169, 1181
AsuHPI	GGTGA	2 cut(s)	1060, 1118
AvaI	CYCGRG	2 cut(s)	917, 1210
AvaII	GGWCC	3 cut(s)	418, 477, 843
BaeGI	GKGCMC	2 cut(s)	252, 1646
BalI	TGGCCA	1 cut(s)	1562
BamHI	GGATCC	1 cut(s)	1030
BanI	GGYRCC	4 cut(s)	115, 133, 275, 1663
BanII	GRGCYC	4 cut(s)	252, 1206, 1394, 1646
BarI	GAAGNNNNNNTAC	2 cut(s)	680, 712
BauI	CACGAG	1 cut(s)	1267
BbrPI	CACGTG	3 cut(s)	396, 507, 1073
BbsI	GAAGAC	1 cut(s)	31
Bbv12I	GWGCWC	1 cut(s)	404
BbvI	GCAGC	4 cut(s)	211, 995, 1053, 1077
BccI	CCATC	3 cut(s)	1045, 1280, 1436
BcgI	CGANNNNNNTGC	2 cut(s)	733, 767
BciT130I	CCWGG	5 cut(s)	828, 1364, 1506, 1671, 1710
BcnI	CCSGG	8 cut(s)	86, 113, 273, 851, 859, 977, 1169, 1181
BcoDI	GTCTC	3 cut(s)	55, 187, 677
BcuI	ACTAGT	1 cut(s)	1297
BfaI	CTAG	1 cut(s)	1298
BfoI	RGCGCY	4 cut(s)	119, 279, 960, 1667
BlpI	GCTNAGC	1 cut(s)	1358
Bme18I	GGWCC	3 cut(s)	418, 477, 843
BmeRI	GACNNNNNGTC	2 cut(s)	646, 649
BmeT110I	CYCGRG	2 cut(s)	917, 1210
BmgT120I	GGNCC	8 cut(s)	248, 249, 418, 477, 843, 1402, 1642, 1643
BmrI	ACTGGG	2 cut(s)	468, 1054
BmsI	GCATC	4 cut(s)	736, 813, 861, 1007
BmuI	ACTGGG	2 cut(s)	468, 1054
BoxI	GACNNNNGTC	2 cut(s)	507, 1212
BpiI	GAAGAC	1 cut(s)	31
BpmI	CTGGAG	2 cut(s)	1385, 1722
Bpu10I	CCTNAGC	1 cut(s)	1388
Bpu1102I	GCTNAGC	1 cut(s)	1358
BpuEI	CTTGAG	1 cut(s)	866
BpuMI	CCSGG	8 cut(s)	86, 113, 273, 851, 859, 977, 1169, 1181
BsaAI	YACGTR	4 cut(s)	264, 396, 507, 1073
BsaHI	GRCGYC	4 cut(s)	116, 276, 351, 1664
BsaWI	WCCGGW	1 cut(s)	768
BsaXI	ACNNNNNCTCC	2 cut(s)	971, 1001
Bse118I	RCCGGY	4 cut(s)	118, 768, 1218, 1500
Bse1I	ACTGG	2 cut(s)	463, 1049
Bse3DI	GCAATG	1 cut(s)	195
BseBI	CCWGG	5 cut(s)	828, 1364, 1506, 1671, 1710
BseGI	GGATG	3 cut(s)	998, 1116, 1655
BseMI	GCAATG	1 cut(s)	195
BseMII	CTCAG	2 cut(s)	1349, 1379
BseNI	ACTGG	2 cut(s)	463, 1049
BseRI	GAGGAG	2 cut(s)	716, 1255
BseSI	GKGCMC	2 cut(s)	252, 1646
BseX3I	CGGCCG	2 cut(s)	580, 1012
BseXI	GCAGC	4 cut(s)	211, 995, 1053, 1077
BseYI	CCCAGC	2 cut(s)	523, 1394
BsgI	GTGCAG	1 cut(s)	310
Bsh1236I	CGCG	7 cut(s)	413, 557, 585, 1130, 1160, 1526, 1639
Bsh1285I	CGRYCG	4 cut(s)	583, 773, 1015, 1353
BshFI	GGCC	8 cut(s)	250, 582, 854, 1014, 1403, 1504, 1562, 1644
BshNI	GGYRCC	4 cut(s)	115, 133, 275, 1663
BshTI	ACCGGT	1 cut(s)	768
BsiEI	CGRYCG	4 cut(s)	583, 773, 1015, 1353
BsiHKAI	GWGCWC	1 cut(s)	404
BsiHKCI	CYCGRG	2 cut(s)	917, 1210
BsiWI	CGTACG	1 cut(s)	948
BslFI	GGGAC	1 cut(s)	94
BsmAI	GTCTC	3 cut(s)	55, 187, 677
BsmBI	CGTCTC	2 cut(s)	55, 677
BsmFI	GGGAC	1 cut(s)	94
BsmI	GAATGC	1 cut(s)	1552
BsnI	GGCC	8 cut(s)	250, 582, 854, 1014, 1403, 1504, 1562, 1644
BsoBI	CYCGRG	2 cut(s)	917, 1210
Bsp120I	GGGCCC	2 cut(s)	248, 1642
Bsp1286I	GDGCHC	5 cut(s)	252, 404, 1206, 1394, 1646
Bsp1407I	TGTACA	3 cut(s)	987, 1188, 1326
Bsp143I	GATC	5 cut(s)	471, 1017, 1030, 1161, 1419
Bsp1720I	GCTNAGC	1 cut(s)	1358
BspANI	GGCC	8 cut(s)	250, 582, 854, 1014, 1403, 1504, 1562, 1644
BspCNI	CTCAG	2 cut(s)	1350, 1380
BspFNI	CGCG	7 cut(s)	413, 557, 585, 1130, 1160, 1526, 1639
BspPI	GGATC	3 cut(s)	1025, 1025, 1038
BspT107I	GGYRCC	4 cut(s)	115, 133, 275, 1663
BsrDI	GCAATG	1 cut(s)	195
BsrFI	RCCGGY	4 cut(s)	118, 768, 1218, 1500
BsrGI	TGTACA	3 cut(s)	987, 1188, 1326
BsrI	ACTGG	2 cut(s)	463, 1049
BssAI	RCCGGY	4 cut(s)	118, 768, 1218, 1500
BssMI	GATC	5 cut(s)	471, 1017, 1030, 1161, 1419
BssNI	GRCGYC	4 cut(s)	116, 276, 351, 1664
BssSI	CACGAG	1 cut(s)	1267
BssT1I	CCWWGG	2 cut(s)	375, 633
Bst2BI	CACGAG	1 cut(s)	1267
Bst2UI	CCWGG	5 cut(s)	828, 1364, 1506, 1671, 1710
Bst4CI	ACNGT	9 cut(s)	37, 130, 301, 316, 802, 1106, 1463, 1491, 1522
Bst6I	CTCTTC	4 cut(s)	68, 77, 755, 785
BstACI	GRCGYC	4 cut(s)	116, 276, 351, 1664
BstAPI	GCANNNNNTGC	2 cut(s)	733, 1183
BstAUI	TGTACA	3 cut(s)	987, 1188, 1326
BstBAI	YACGTR	4 cut(s)	264, 396, 507, 1073
BstC8I	GCNNGC	8 cut(s)	120, 149, 431, 609, 1006, 1341, 1560, 1646
BstDEI	CTNAG	2 cut(s)	1358, 1388
BstDSI	CCRYGG	2 cut(s)	129, 1659
BstF5I	GGATG	3 cut(s)	998, 1116, 1655
BstFNI	CGCG	7 cut(s)	413, 557, 585, 1130, 1160, 1526, 1639
BstH2I	RGCGCY	4 cut(s)	119, 279, 960, 1667
BstKTI	GATC	5 cut(s)	474, 1020, 1033, 1164, 1422
BstMAI	GTCTC	3 cut(s)	55, 187, 677
BstMBI	GATC	5 cut(s)	471, 1017, 1030, 1161, 1419
BstMCI	CGRYCG	4 cut(s)	583, 773, 1015, 1353
BstMWI	GCNNNNNNNGC	8 cut(s)	199, 408, 541, 733, 1096, 1183, 1534, 1645
BstNI	CCWGG	5 cut(s)	828, 1364, 1506, 1671, 1710
BstNSI	RCATGY	3 cut(s)	109, 199, 1090
BstPAI	GACNNNNGTC	2 cut(s)	507, 1212
BstSLI	GKGCMC	2 cut(s)	252, 1646
BstUI	CGCG	7 cut(s)	413, 557, 585, 1130, 1160, 1526, 1639
BstV1I	GCAGC	4 cut(s)	211, 995, 1053, 1077
BstV2I	GAAGAC	1 cut(s)	31
BstX2I	RGATCY	1 cut(s)	1030
BstXI	CCANNNNNNTGG	1 cut(s)	446
BstYI	RGATCY	1 cut(s)	1030
BstZI	CGGCCG	2 cut(s)	580, 1012
BsuRI	GGCC	8 cut(s)	250, 582, 854, 1014, 1403, 1504, 1562, 1644
BtgI	CCRYGG	2 cut(s)	129, 1659
BtgZI	GCGATG	2 cut(s)	61, 836
BtsCI	GGATG	3 cut(s)	998, 1116, 1655
BtsI	GCAGTG	1 cut(s)	158
BtsIMutI	CAGTG	4 cut(s)	158, 456, 518, 1500
Cac8I	GCNNGC	8 cut(s)	120, 149, 431, 609, 1006, 1341, 1560, 1646
CaiI	CAGNNNCTG	2 cut(s)	205, 1720
Cfr10I	RCCGGY	4 cut(s)	118, 768, 1218, 1500
Cfr13I	GGNCC	8 cut(s)	248, 249, 418, 477, 843, 1402, 1642, 1643
CseI	GACGC	3 cut(s)	574, 1166, 1558
Csp6I	GTAC	9 cut(s)	265, 553, 949, 988, 1189, 1258, 1327, 1384, 1498
CspAI	ACCGGT	1 cut(s)	768
CviAII	CATG	8 cut(s)	106, 196, 244, 667, 1078, 1087, 1564, 1681
CviQI	GTAC	9 cut(s)	265, 553, 949, 988, 1189, 1258, 1327, 1384, 1498
DdeI	CTNAG	2 cut(s)	1358, 1388
DinI	GGCGCC	3 cut(s)	117, 277, 1665
DpnI	GATC	5 cut(s)	473, 1019, 1032, 1163, 1421
DpnII	GATC	5 cut(s)	471, 1017, 1030, 1161, 1419
DraIII	CACNNNGTG	3 cut(s)	399, 489, 1183
DrdI	GACNNNNNNGTC	1 cut(s)	584
DriI	GACNNNNNGTC	2 cut(s)	646, 649
DseDI	GACNNNNNNGTC	1 cut(s)	584
EaeI	YGGCCR	4 cut(s)	580, 852, 1012, 1560
EagI	CGGCCG	2 cut(s)	580, 1012
Eam1104I	CTCTTC	4 cut(s)	68, 77, 755, 785
Eam1105I	GACNNNNNGTC	2 cut(s)	646, 649
EarI	CTCTTC	4 cut(s)	68, 77, 755, 785
EciI	GGCGGA	6 cut(s)	43, 359, 615, 653, 991, 1368
EclXI	CGGCCG	2 cut(s)	580, 1012
Eco130I	CCWWGG	2 cut(s)	375, 633
Eco24I	GRGCYC	4 cut(s)	252, 1206, 1394, 1646
Eco47I	GGWCC	3 cut(s)	418, 477, 843
Eco52I	CGGCCG	2 cut(s)	580, 1012
Eco57I	CTGAAG	3 cut(s)	227, 1318, 1622
Eco72I	CACGTG	3 cut(s)	396, 507, 1073
Eco88I	CYCGRG	2 cut(s)	917, 1210
EcoO109I	RGGNCCY	5 cut(s)	248, 249, 477, 843, 1642
EcoRI	GAATTC	1 cut(s)	1469
EcoRII	CCWGG	5 cut(s)	826, 1362, 1504, 1669, 1708
EcoT14I	CCWWGG	2 cut(s)	375, 633
EcoT38I	GRGCYC	4 cut(s)	252, 1206, 1394, 1646
EgeI	GGCGCC	3 cut(s)	117, 277, 1665
EheI	GGCGCC	3 cut(s)	117, 277, 1665
ErhI	CCWWGG	2 cut(s)	375, 633
Esp3I	CGTCTC	2 cut(s)	55, 677
FaeI	CATG	8 cut(s)	109, 199, 247, 670, 1081, 1090, 1567, 1684
FalI	AAGNNNNNCTT	2 cut(s)	595, 627
FaqI	GGGAC	1 cut(s)	94
FatI	CATG	8 cut(s)	105, 195, 243, 666, 1077, 1086, 1563, 1680
FauI	CCCGC	6 cut(s)	140, 339, 600, 935, 1632, 1653
FblI	GTMKAC	1 cut(s)	1652
FokI	GGATG	3 cut(s)	985, 1103, 1642
FriOI	GRGCYC	4 cut(s)	252, 1206, 1394, 1646
FspBI	CTAG	1 cut(s)	1298
GsaI	CCCAGC	2 cut(s)	527, 1398
GsuI	CTGGAG	2 cut(s)	1385, 1722
HaeII	RGCGCY	4 cut(s)	119, 279, 960, 1667
HaeIII	GGCC	8 cut(s)	250, 582, 854, 1014, 1403, 1504, 1562, 1644
HgaI	GACGC	3 cut(s)	574, 1166, 1558
Hin1I	GRCGYC	4 cut(s)	116, 276, 351, 1664
Hin1II	CATG	8 cut(s)	109, 199, 247, 670, 1081, 1090, 1567, 1684
HincII	GTYRAC	3 cut(s)	914, 1480, 1653
HindII	GTYRAC	3 cut(s)	914, 1480, 1653
HindIII	AAGCTT	1 cut(s)	656
HinfI	GANTC	8 cut(s)	89, 157, 180, 463, 568, 775, 1213, 1597
HphI	GGTGA	2 cut(s)	1060, 1118
Hpy166II	GTNNAC	8 cut(s)	418, 914, 988, 1480, 1498, 1545, 1653, 1696
Hpy188I	TCNGA	7 cut(s)	207, 361, 391, 1030, 1035, 1487, 1602
Hpy8I	GTNNAC	8 cut(s)	418, 914, 988, 1480, 1498, 1545, 1653, 1696
HpyAV	CCTTC	5 cut(s)	376, 490, 597, 682, 1433
HpyCH4III	ACNGT	9 cut(s)	37, 130, 301, 316, 802, 1106, 1463, 1491, 1522
HpyCH4IV	ACGT	7 cut(s)	48, 263, 351, 395, 506, 1072, 1110
HpyCH4V	TGCA	6 cut(s)	193, 199, 327, 727, 1177, 1735
HpyF10VI	GCNNNNNNNGC	8 cut(s)	199, 408, 541, 733, 1096, 1183, 1534, 1645
HpyF3I	CTNAG	2 cut(s)	1358, 1388
HpySE526I	ACGT	7 cut(s)	48, 263, 351, 395, 506, 1072, 1110
Hsp92I	GRCGYC	4 cut(s)	116, 276, 351, 1664
Hsp92II	CATG	8 cut(s)	109, 199, 247, 670, 1081, 1090, 1567, 1684
KasI	GGCGCC	3 cut(s)	115, 275, 1663
KroI	GCCGGC	1 cut(s)	118
KroNI	GCCGGC	1 cut(s)	120
Kzo9I	GATC	5 cut(s)	471, 1017, 1030, 1161, 1419
LmnI	GCTCC	3 cut(s)	127, 879, 1308
Lsp1109I	GCAGC	4 cut(s)	211, 995, 1053, 1077
LweI	GCATC	4 cut(s)	736, 813, 861, 1007
MaeI	CTAG	1 cut(s)	1298
MaeII	ACGT	7 cut(s)	48, 263, 351, 395, 506, 1072, 1110
MaeIII	GTNAC	4 cut(s)	305, 316, 449, 1106
MalI	GATC	5 cut(s)	473, 1019, 1032, 1163, 1421
MboI	GATC	5 cut(s)	471, 1017, 1030, 1161, 1419
MboII	GAAGA	9 cut(s)	31, 34, 55, 64, 152, 220, 742, 772, 1367
MflI	RGATCY	1 cut(s)	1030
MhlI	GDGCHC	5 cut(s)	252, 404, 1206, 1394, 1646
MlsI	TGGCCA	1 cut(s)	1562
MluCI	AATT	3 cut(s)	904, 1469, 1689
MluNI	TGGCCA	1 cut(s)	1562
Mly113I	GGCGCC	3 cut(s)	116, 276, 1664
MlyI	GAGTC	4 cut(s)	83, 189, 1222, 1606
MmeI	TCCRAC	2 cut(s)	279, 414
Mox20I	TGGCCA	1 cut(s)	1562
MroNI	GCCGGC	1 cut(s)	118
MscI	TGGCCA	1 cut(s)	1562
MseI	TTAA	1 cut(s)	1688
Msp20I	TGGCCA	1 cut(s)	1562
MspA1I	CMGCKG	3 cut(s)	1008, 1066, 1648
Mva1269I	GAATGC	1 cut(s)	1552
MvaI	CCWGG	5 cut(s)	828, 1364, 1506, 1671, 1710
MvnI	CGCG	7 cut(s)	413, 557, 585, 1130, 1160, 1526, 1639
MwoI	GCNNNNNNNGC	8 cut(s)	199, 408, 541, 733, 1096, 1183, 1534, 1645
NaeI	GCCGGC	1 cut(s)	120
NarI	GGCGCC	3 cut(s)	116, 276, 1664
NciI	CCSGG	8 cut(s)	86, 113, 273, 851, 859, 977, 1169, 1181
NdeII	GATC	5 cut(s)	471, 1017, 1030, 1161, 1419
NgoMIV	GCCGGC	1 cut(s)	118
NlaIII	CATG	8 cut(s)	109, 199, 247, 670, 1081, 1090, 1567, 1684
NmeAIII	GCCGAG	1 cut(s)	1379
NmuCI	GTSAC	1 cut(s)	1106
NspI	RCATGY	3 cut(s)	109, 199, 1090
PciI	ACATGT	1 cut(s)	105
PcsI	WCGNNNNNNNCGW	2 cut(s)	387, 401
PctI	GAATGC	1 cut(s)	1552
PdiI	GCCGGC	1 cut(s)	120
PfeI	GAWTC	4 cut(s)	157, 463, 568, 775
Pfl23II	CGTACG	1 cut(s)	948
PflMI	CCANNNNNTGG	1 cut(s)	1576
PinAI	ACCGGT	1 cut(s)	768
PleI	GAGTC	4 cut(s)	83, 188, 1221, 1605
PluTI	GGCGCC	3 cut(s)	119, 279, 1667
PmaCI	CACGTG	3 cut(s)	396, 507, 1073
PmlI	CACGTG	3 cut(s)	396, 507, 1073
PpsI	GAGTC	4 cut(s)	83, 188, 1221, 1605
Ppu21I	YACGTR	4 cut(s)	264, 396, 507, 1073
PpuMI	RGGWCCY	2 cut(s)	477, 843
PscI	ACATGT	1 cut(s)	105
PshAI	GACNNNNGTC	2 cut(s)	507, 1212
PshBI	ATTAAT	1 cut(s)	1688
Psp5II	RGGWCCY	2 cut(s)	477, 843
Psp6I	CCWGG	5 cut(s)	826, 1362, 1504, 1669, 1708
PspCI	CACGTG	3 cut(s)	396, 507, 1073
PspFI	CCCAGC	2 cut(s)	523, 1394
PspGI	CCWGG	5 cut(s)	826, 1362, 1504, 1669, 1708
PspLI	CGTACG	1 cut(s)	948
PspOMI	GGGCCC	2 cut(s)	248, 1642
PspPI	GGNCC	8 cut(s)	248, 249, 418, 477, 843, 1402, 1642, 1643
PspPPI	RGGWCCY	2 cut(s)	477, 843
PstNI	CAGNNNCTG	2 cut(s)	205, 1720
PsuI	RGATCY	1 cut(s)	1030
PvuII	CAGCTG	1 cut(s)	1008
RsaI	GTAC	9 cut(s)	266, 554, 950, 989, 1190, 1259, 1328, 1385, 1499
RsaNI	GTAC	9 cut(s)	265, 553, 949, 988, 1189, 1258, 1327, 1384, 1498
SalI	GTCGAC	1 cut(s)	1651
SaqAI	TTAA	1 cut(s)	1688
Sau3AI	GATC	5 cut(s)	471, 1017, 1030, 1161, 1419
Sau96I	GGNCC	8 cut(s)	248, 249, 418, 477, 843, 1402, 1642, 1643
SchI	GAGTC	4 cut(s)	83, 189, 1222, 1606
SduI	GDGCHC	5 cut(s)	252, 404, 1206, 1394, 1646
SfaNI	GCATC	4 cut(s)	736, 813, 861, 1007
SfoI	GGCGCC	3 cut(s)	117, 277, 1665
SinI	GGWCC	3 cut(s)	418, 477, 843
SmlI	CTYRAG	1 cut(s)	881
SmoI	CTYRAG	1 cut(s)	881
SpeI	ACTAGT	1 cut(s)	1297
Sse9I	AATT	3 cut(s)	904, 1469, 1689
SspDI	GGCGCC	3 cut(s)	115, 275, 1663
SspMI	CTAG	1 cut(s)	1298
StyI	CCWWGG	2 cut(s)	375, 633
TaaI	ACNGT	9 cut(s)	37, 130, 301, 316, 802, 1106, 1463, 1491, 1522
TaiI	ACGT	7 cut(s)	51, 266, 354, 398, 509, 1075, 1113
TaqI	TCGA	7 cut(s)	519, 773, 783, 971, 1431, 1620, 1652
TaqII	GACCGA	2 cut(s)	249, 1367
TasI	AATT	3 cut(s)	904, 1469, 1689
TatI	WGTACW	3 cut(s)	987, 1188, 1326
TauI	GCSGC	8 cut(s)	26, 291, 585, 942, 957, 1014, 1066, 1133
TfiI	GAWTC	4 cut(s)	157, 463, 568, 775
Tru1I	TTAA	1 cut(s)	1688
Tru9I	TTAA	1 cut(s)	1688
TscAI	CASTG	4 cut(s)	158, 463, 518, 1500
TseFI	GTSAC	1 cut(s)	1106
TseI	GCWGC	4 cut(s)	199, 1008, 1066, 1090
Tsp45I	GTSAC	1 cut(s)	1106
TspDTI	ATGAA	3 cut(s)	64, 902, 1580
TspGWI	ACGGA	8 cut(s)	293, 335, 708, 856, 906, 1152, 1465, 1648
TspRI	CASTG	4 cut(s)	158, 463, 518, 1500
Van91I	CCANNNNNTGG	1 cut(s)	1576
VpaK11BI	GGWCC	3 cut(s)	418, 477, 843
VspI	ATTAAT	1 cut(s)	1688
XapI	RAATTY	1 cut(s)	1469
XceI	RCATGY	3 cut(s)	109, 199, 1090
XmiI	GTMKAC	1 cut(s)	1652
XspI	CTAG	1 cut(s)	1298
ZraI	GACGTC	1 cut(s)	352

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.