RLG00000006447

Prolyl oligopeptidase, N-terminal beta-propeller domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0014498
Physical Location & Seq
Forward (+)
7318826 .. 7323670
4845 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000006447

Sequence Viewer

Length: 2328 bp
ATGGCTCTTCTTTCCTTCGTCCTCAACCAAAAGTGCTCCCTTCAGAGGTCCCTCACTTTTGGCTTAATTCCCTACATATCCTCCTCCCTCTTCTCTACTCTTTGCAGAGACCACCCCTCCTCCCCTGCCCCACCGCGGGCCTCTCCGCCGGTCCCAAAGAAAGTACCTTTCACGGTCTCAGCTCACGGCAGAACGTGGCAGGACCCCTACCGTTGGATGTCCAACACCGACGACCCTGATCTCTCCGACCACCTCAACCAGGAAAACTCATACGCCGATGCTTTCATGGCTGACACTCGCAGCCTCCAACGAACTCTGGTCTCTGAGATGACAAGTCGTGTGCCCACCAAGATTTCAACCCCTCCTGAGCTTTGGGGACCCTGGTTGTATTACCAATACATTCCAGAAGGGAAAGAATACCCGGTTCTTTGTAGAAGATTAGGAATCAAAAAGAAAGGTTATGTGCATGTTGGTACGTGTCGAATTTCACCAGACCACCATTTCCTAGCCTACACACTTGATATCAAGGGTGATGAGCAGTTCATTCTTCAAATTAAGGACCTAAGACGTGGATGTATCATTCCCAAAGTACATGTTAATGGTGTTGTTAGCTTGGCATGGGCTCAGGATAGCAGTACTCTGTTTTATACACTATCAGATGAGAATCAACGACCTTACAGGGTTGTCTGCTCAAAACTAGGATCTGATGATATGGAAAATATCACTGTGTTTACAGAAAGTAATTCCAGCTTCTGTGTGGACATAACAAGCACAAAAGATGGCAAGTTTATAACTGTCAATTCAAGTTCAAGGACTTCATCTGAGGAAGGAATTTTACTAGTTTATTTGATAGATTCTGCCAACCCATTAGATGGATTGCAGAAAGTGTGGAAGCGCGTTCCTGGCGTACAGTATTTTCTGGAACATCATTGTGGAATATTTTATGTTCTTACTAATGCTCCTTTGCGAGAAAGCAAGGAGTGGTCAGATGAAGGTTATTACCTAGCTAGATGCCGTGTTGAAGATATACTGTCATCTAATTGGCAGAATATCATCATTCCAAGTGAAGACTTCAGCATTCAAGACATGGACATGTTTGATGGGCATCTGGTCCTTTTTCTCAACAAGAAGGATTACTCCCTCTTCTGTTCCATTGATTTGCCTATGGCTGTTCATTGTAAGCATCAAGTGAAGATTGAAGATCTTGATCCCTGGTTTTTCCCTCTGCCCTCAAATTCATGTAGCGTTGCTCCAGGTTCAAACCATGACTTCCAGAATTCAGCATACCGTGTGGTGCTTTCTTCTCCTGTGATGCCTGATGTAGTTGTTGACTATGACATGTCAACACGGAGATTCTCAGTTGTGCAGCAAGAAGAAGTGATGGGCTTTTGTGATTCAAGCTCACCAGCCAATGAGATAGATATGAACCAAACTCTTGTTAAACAAAATGAGAAGGATAAAAATGTCCAGATAAGTGAATCACAAAGATGGAAAGACTTTTCTGGTGAATACTGCTGTGAGAGGAGGGAAGTTATTTCCCATGATGGTGTTAAAGTTCCTTTGACCCTACTGTACTCTCATACGGCCTGGAAAATGGGTCGGTCTCCTGGGCTTCTACACGGATATGGAGCATATGGGGAGGTTTTAGATAAAAGCTGGTGCACTGATCGGCTGAGTTTACTTGACCGGGGATGGGTGGTGGCATTTGCTGATGTGAGGGGTAGTGGTGGAGATTCTTCGTGGCATAAAGCTGGAAGTCAGTTTAATAAACTGAATTCGATATACGATTTTGTATCATGTGGCAGCTACCTGATTAAAGAGGGTTATGTACATAGCGATCAGCTTGGTGCTATTGGACATAGTGCTGGAGGTCTACTTGTTGGAGCAGCTATCAATAAGTACCCAGATCTATTTTGTGCTGCTATTTTGAAGGTTCCATTTCTTGATGCATGCAACACTCTAATGGATCCCAGCTTGCCCCTCACGATTCTGGATTATGAAGAATTTGGCAATCCTCAGATAAAGTCCCAATTTGAGCATATCTTGAGTTATTCACCTTATGATAATATCTCTCAAGGCAGTTGTTACCCTTCAATGCTTGTTACAGCGTCCTTTCATGACTCGAGGGTTGGGTTTTGGGAAGCTGCCAAGTGGGTGGCCAAAGTTCGAGATAGCACATGTCCTCGTTGTTCTTGTTCTGTTCTTCTGAAGACAAATATGACCGGAGGACATTTTGGCGAAGGTGGACGCTATGCTCAAAGTGAGGAAACTGCGTATGATTATGCTTTCCTTTTTAAAGCTATGGGGATGGTGAAGAATGAAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_S9 Peptidase_S9_N

Protein Analysis

776

Amino Acids

87.26

Weight (kDa)

5.78

Isoelectric Point (pI)

48.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S9_N PF02897 49 - 457 2.1e-49 Prolyl oligopeptidase, N-terminal beta-propeller domain
Peptidase_S9 PF00326 557 - 769 2.2e-44 Prolyl oligopeptidase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014498)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G69020 AT1G69020
fragaria_vesca FvH4_4g29260
malus_domestica MD13G1056200.v1.1
prunus_persica Prupe.1G293900_v2.0.a1
pyrus_communis pycom13g05020
rosa_chinensis RchiOBHm_Chr4g0437311
rosa_laevigata RLG00000006447
rosa_multiflora Rmu_co8522681.1_g000001 Rmu_sc0004339.1_g000034
rosa_roxburghii Rroxscaffold_5G00378460
rosa_rugosa Rorug04G0299500
rosa_samantha Rh4AG354500 Rh4BG364300 Rh4CG378600 Rh4DG358200
rosa_wichuraiana Rw4G031080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 791
AccB7I CCANNNNNTGG 1 cut(s) 872
AccI GTMKAC 1 cut(s) 1873
AccII CGCG 2 cut(s) 136, 897
AciI CCGC 3 cut(s) 134, 136, 146
AclWI GGATC 4 cut(s) 709, 1202, 1961, 1974
AcoI YGGCCR 1 cut(s) 2157
AcsI RAATTY 6 cut(s) 483, 831, 1234, 1276, 1774, 2003
AcuI CTGAAG 3 cut(s) 26, 1057, 2228
AfaI GTAC 8 cut(s) 165, 475, 591, 637, 909, 1574, 1830, 1901
AfiI CCNNNNNNNGG 7 cut(s) 45, 135, 136, 213, 259, 872, 1693
AflIII ACRYGT 5 cut(s) 476, 592, 1092, 1338, 2177
AhlI ACTAGT 1 cut(s) 838
AjiI CACGTC 1 cut(s) 569
AjnI CCWGG 7 cut(s) 258, 380, 901, 1211, 1252, 1586, 1606
Alw21I GWGCWC 2 cut(s) 38, 1664
Alw26I GTCTC 4 cut(s) 102, 181, 325, 1608
Alw44I GTGCAC 1 cut(s) 1660
AlwI GGATC 4 cut(s) 709, 1202, 1961, 1974
AlwNI CAGNNNCTG 1 cut(s) 753
Ama87I CYCGRG 1 cut(s) 2122
AoxI GGCC 3 cut(s) 138, 1584, 2157
ApaLI GTGCAC 1 cut(s) 1660
ApeKI GCWGC 6 cut(s) 300, 1366, 1803, 1886, 1919, 2144
ApoI RAATTY 6 cut(s) 483, 831, 1234, 1276, 1774, 2003
AspLEI GCGC 1 cut(s) 897
AspS9I GGNCC 7 cut(s) 48, 138, 151, 202, 377, 559, 1111
AsuC2I CCSGG 2 cut(s) 422, 1688
AsuHPI GGTGA 6 cut(s) 480, 542, 1395, 1517, 2046, 2323
AvaI CYCGRG 1 cut(s) 2122
AvaII GGWCC 6 cut(s) 48, 151, 202, 377, 559, 1111
BaeGI GKGCMC 2 cut(s) 345, 1664
BalI TGGCCA 1 cut(s) 2159
BamHI GGATCC 1 cut(s) 1966
BanII GRGCYC 1 cut(s) 625
BarI GAAGNNNNNNTAC 2 cut(s) 819, 851
BbsI GAAGAC 2 cut(s) 1074, 2216
Bbv12I GWGCWC 2 cut(s) 38, 1664
BbvI GCAGC 6 cut(s) 312, 1378, 1815, 1898, 1906, 2131
BccI CCATC 8 cut(s) 773, 866, 1094, 1375, 1482, 1538, 1686, 2302
BceAI ACGGC 3 cut(s) 202, 999, 1599
BciT130I CCWGG 7 cut(s) 260, 382, 903, 1213, 1254, 1588, 1608
BcnI CCSGG 2 cut(s) 422, 1688
BcoDI GTCTC 4 cut(s) 102, 181, 325, 1608
BcuI ACTAGT 1 cut(s) 838
BfaI CTAG 5 cut(s) 506, 698, 839, 1004, 1008
BglII AGATCT 2 cut(s) 1201, 1906
BisI GCNGC 6 cut(s) 301, 1367, 1804, 1887, 1920, 2145
BlsI GCNGC 6 cut(s) 302, 1368, 1805, 1888, 1921, 2146
BmcAI AGTACT 1 cut(s) 637
Bme1390I CCNGG 9 cut(s) 260, 382, 422, 903, 1213, 1254, 1588, 1608, 1688
Bme18I GGWCC 6 cut(s) 48, 151, 202, 377, 559, 1111
BmeT110I CYCGRG 1 cut(s) 2122
BmgBI CACGTC 1 cut(s) 569
BmgT120I GGNCC 7 cut(s) 48, 138, 151, 202, 377, 559, 1111
BmiI GGNNCC 7 cut(s) 50, 153, 204, 378, 379, 1935, 1968
BmrFI CCNGG 9 cut(s) 260, 382, 422, 903, 1213, 1254, 1588, 1608, 1688
BmsI GCATC 6 cut(s) 268, 1001, 1114, 1192, 1302, 1936
BpiI GAAGAC 2 cut(s) 1074, 2216
BpmI CTGGAG 2 cut(s) 1236, 1887
Bpu10I CCTNAGC 2 cut(s) 366, 624
BpuEI CTTGAG 2 cut(s) 2058, 2065
BpuMI CCSGG 2 cut(s) 422, 1688
BsaAI YACGTR 1 cut(s) 477
BsaBI GATNNNNATC 3 cut(s) 663, 1104, 1206
BsaI GGTCTC 4 cut(s) 102, 181, 325, 1608
BsaJI CCNNGG 5 cut(s) 134, 380, 1211, 1607, 1687
BsaWI WCCGGW 1 cut(s) 2222
BsaXI ACNNNNNCTCC 8 cut(s) 65, 95, 101, 104, 131, 134, 943, 973
Bsc4I CCNNNNNNNGG 7 cut(s) 45, 135, 136, 213, 259, 872, 1693
Bse118I RCCGGY 1 cut(s) 148
Bse8I GATNNNNATC 3 cut(s) 663, 1104, 1206
BseBI CCWGG 7 cut(s) 260, 382, 903, 1213, 1254, 1588, 1608
BseDI CCNNGG 5 cut(s) 134, 380, 1211, 1607, 1687
BseGI GGATG 4 cut(s) 222, 578, 1697, 2313
BseJI GATNNNNATC 3 cut(s) 663, 1104, 1206
BseLI CCNNNNNNNGG 7 cut(s) 45, 135, 136, 213, 259, 872, 1693
BseMII CTCAG 8 cut(s) 192, 315, 357, 638, 813, 1371, 1664, 2030
BseRI GAGGAG 3 cut(s) 73, 109, 1537
BseSI GKGCMC 2 cut(s) 345, 1664
BseXI GCAGC 6 cut(s) 312, 1378, 1815, 1898, 1906, 2131
BseYI CCCAGC 1 cut(s) 1970
BsgI GTGCAG 1 cut(s) 1385
Bsh1236I CGCG 2 cut(s) 136, 897
BshFI GGCC 3 cut(s) 140, 1586, 2159
BsiHKAI GWGCWC 2 cut(s) 38, 1664
BsiHKCI CYCGRG 1 cut(s) 2122
BsiSI CCGG 4 cut(s) 149, 422, 1687, 2223
BslFI GGGAC 4 cut(s) 34, 137, 390, 2011
BslI CCNNNNNNNGG 7 cut(s) 45, 135, 136, 213, 259, 872, 1693
BsmAI GTCTC 4 cut(s) 102, 181, 325, 1608
BsmFI GGGAC 4 cut(s) 34, 137, 390, 2011
BsmI GAATGC 1 cut(s) 1077
BsnI GGCC 3 cut(s) 140, 1586, 2159
Bso31I GGTCTC 4 cut(s) 102, 181, 325, 1608
BsoBI CYCGRG 1 cut(s) 2122
Bsp1286I GDGCHC 4 cut(s) 38, 345, 625, 1664
Bsp1407I TGTACA 1 cut(s) 1828
Bsp143I GATC 8 cut(s) 238, 701, 1201, 1207, 1666, 1837, 1906, 1966
BspACI CCGC 3 cut(s) 134, 136, 146
BspANI GGCC 3 cut(s) 140, 1586, 2159
BspCNI CTCAG 8 cut(s) 191, 316, 358, 637, 814, 1370, 1665, 2029
BspFNI CGCG 2 cut(s) 136, 897
BspHI TCATGA 1 cut(s) 2116
BspLI GGNNCC 7 cut(s) 50, 153, 204, 378, 379, 1935, 1968
BspPI GGATC 4 cut(s) 709, 1202, 1961, 1974
BspQI GCTCTTC 1 cut(s) 12
BspTNI GGTCTC 4 cut(s) 102, 181, 325, 1608
BsrFI RCCGGY 1 cut(s) 148
BsrGI TGTACA 1 cut(s) 1828
BssAI RCCGGY 1 cut(s) 148
BssECI CCNNGG 5 cut(s) 134, 380, 1211, 1607, 1687
BssMI GATC 8 cut(s) 238, 701, 1201, 1207, 1666, 1837, 1906, 1966
Bst2UI CCWGG 7 cut(s) 260, 382, 903, 1213, 1254, 1588, 1608
Bst4CI ACNGT 8 cut(s) 175, 212, 727, 796, 912, 1032, 1289, 1572
Bst6I CTCTTC 3 cut(s) 12, 95, 1148
BstAUI TGTACA 1 cut(s) 1828
BstBAI YACGTR 1 cut(s) 477
BstC8I GCNNGC 3 cut(s) 138, 1951, 1976
BstDEI CTNAG 9 cut(s) 178, 324, 366, 563, 624, 822, 1357, 1673, 2016
BstDSI CCRYGG 1 cut(s) 134
BstENI CCTNNNNNAGG 1 cut(s) 257
BstF5I GGATG 4 cut(s) 222, 578, 1697, 2313
BstFNI CGCG 2 cut(s) 136, 897
BstHHI GCGC 1 cut(s) 897
BstKTI GATC 8 cut(s) 241, 704, 1204, 1210, 1669, 1840, 1909, 1969
BstMAI GTCTC 4 cut(s) 102, 181, 325, 1608
BstMBI GATC 8 cut(s) 238, 701, 1201, 1207, 1666, 1837, 1906, 1966
BstMWI GCNNNNNNNGC 2 cut(s) 287, 903
BstNI CCWGG 7 cut(s) 260, 382, 903, 1213, 1254, 1588, 1608
BstNSI RCATGY 6 cut(s) 470, 596, 1096, 1342, 1953, 2181
BstSCI CCNGG 9 cut(s) 258, 380, 420, 901, 1211, 1252, 1586, 1606, 1686
BstSLI GKGCMC 2 cut(s) 345, 1664
BstUI CGCG 2 cut(s) 136, 897
BstV1I GCAGC 6 cut(s) 312, 1378, 1815, 1898, 1906, 2131
BstV2I GAAGAC 2 cut(s) 1074, 2216
BstX2I RGATCY 4 cut(s) 701, 1201, 1906, 1966
BstXI CCANNNNNNTGG 1 cut(s) 2155
BstYI RGATCY 4 cut(s) 701, 1201, 1906, 1966
BsuRI GGCC 3 cut(s) 140, 1586, 2159
BtgI CCRYGG 1 cut(s) 134
BtrI CACGTC 1 cut(s) 569
BtsCI GGATG 4 cut(s) 222, 578, 1697, 2313
BtsIMutI CAGTG 2 cut(s) 723, 1662
Cac8I GCNNGC 3 cut(s) 138, 1951, 1976
CaiI CAGNNNCTG 1 cut(s) 753
CciI TCATGA 1 cut(s) 2116
CfoI GCGC 1 cut(s) 897
Cfr10I RCCGGY 1 cut(s) 148
Cfr13I GGNCC 7 cut(s) 48, 138, 151, 202, 377, 559, 1111
Cfr42I CCGCGG 1 cut(s) 137
CseI GACGC 2 cut(s) 2097, 2256
Csp6I GTAC 8 cut(s) 164, 474, 590, 636, 908, 1573, 1829, 1900
CviQI GTAC 8 cut(s) 164, 474, 590, 636, 908, 1573, 1829, 1900
DdeI CTNAG 9 cut(s) 178, 324, 366, 563, 624, 822, 1357, 1673, 2016
DpnI GATC 8 cut(s) 240, 703, 1203, 1209, 1668, 1839, 1908, 1968
DpnII GATC 8 cut(s) 238, 701, 1201, 1207, 1666, 1837, 1906, 1966
DraI TTTAAA 1 cut(s) 2296
EaeI YGGCCR 1 cut(s) 2157
Eam1104I CTCTTC 3 cut(s) 12, 95, 1148
EarI CTCTTC 3 cut(s) 12, 95, 1148
EciI GGCGGA 1 cut(s) 135
Eco24I GRGCYC 1 cut(s) 625
Eco31I GGTCTC 4 cut(s) 102, 181, 325, 1608
Eco32I GATATC 1 cut(s) 523
Eco47I GGWCC 6 cut(s) 48, 151, 202, 377, 559, 1111
Eco57I CTGAAG 3 cut(s) 26, 1057, 2228
Eco88I CYCGRG 1 cut(s) 2122
EcoNI CCTNNNNNAGG 1 cut(s) 257
EcoO109I RGGNCCY 4 cut(s) 48, 202, 377, 559
EcoRI GAATTC 2 cut(s) 1276, 1774
EcoRII CCWGG 7 cut(s) 258, 380, 901, 1211, 1252, 1586, 1606
EcoRV GATATC 1 cut(s) 523
EcoT22I ATGCAT 1 cut(s) 1951
EcoT38I GRGCYC 1 cut(s) 625
FaqI GGGAC 4 cut(s) 34, 137, 390, 2011
FauI CCCGC 1 cut(s) 129
FauNDI CATATG 1 cut(s) 1633
FblI GTMKAC 1 cut(s) 1873
Fnu4HI GCNGC 6 cut(s) 301, 1367, 1804, 1887, 1920, 2145
FokI GGATG 4 cut(s) 229, 585, 1704, 2320
FriOI GRGCYC 1 cut(s) 625
Fsp4HI GCNGC 6 cut(s) 301, 1367, 1804, 1887, 1920, 2145
FspBI CTAG 5 cut(s) 506, 698, 839, 1004, 1008
GlaI GCGC 1 cut(s) 896
GluI GCNGC 6 cut(s) 301, 1367, 1804, 1887, 1920, 2145
GsaI CCCAGC 1 cut(s) 1974
GsuI CTGGAG 2 cut(s) 1236, 1887
HaeIII GGCC 3 cut(s) 140, 1586, 2159
HapII CCGG 4 cut(s) 149, 422, 1687, 2223
HgaI GACGC 2 cut(s) 2097, 2256
HhaI GCGC 1 cut(s) 897
Hin6I GCGC 1 cut(s) 895
HinP1I GCGC 1 cut(s) 895
HincII GTYRAC 2 cut(s) 1330, 1344
HindII GTYRAC 2 cut(s) 1330, 1344
HinfI GANTC 9 cut(s) 444, 664, 854, 1353, 1394, 1478, 1733, 1987, 2120
HpaII CCGG 4 cut(s) 149, 422, 1687, 2223
HphI GGTGA 6 cut(s) 480, 542, 1395, 1517, 2046, 2323
Hpy166II GTNNAC 8 cut(s) 732, 760, 1330, 1344, 1662, 1679, 1874, 2246
Hpy188I TCNGA 9 cut(s) 45, 247, 325, 658, 706, 823, 988, 2019, 2208
Hpy8I GTNNAC 8 cut(s) 732, 760, 1330, 1344, 1662, 1679, 1874, 2246
Hpy99I CGWCG 1 cut(s) 233
HpyCH4III ACNGT 8 cut(s) 175, 212, 727, 796, 912, 1032, 1289, 1572
HpyCH4IV ACGT 3 cut(s) 194, 476, 568
HpyCH4V TGCA 7 cut(s) 105, 466, 880, 1366, 1662, 1949, 1953
HpyF10VI GCNNNNNNNGC 2 cut(s) 287, 903
HpyF3I CTNAG 9 cut(s) 178, 324, 366, 563, 624, 822, 1357, 1673, 2016
HpySE526I ACGT 3 cut(s) 194, 476, 568
HspAI GCGC 1 cut(s) 895
KflI GGGWCCC 1 cut(s) 377
KspI CCGCGG 1 cut(s) 137
Kzo9I GATC 8 cut(s) 238, 701, 1201, 1207, 1666, 1837, 1906, 1966
LguI GCTCTTC 1 cut(s) 12
LmnI GCTCC 5 cut(s) 41, 964, 1255, 1628, 1883
Lsp1109I GCAGC 6 cut(s) 312, 1378, 1815, 1898, 1906, 2131
LweI GCATC 6 cut(s) 268, 1001, 1114, 1192, 1302, 1936
MaeI CTAG 5 cut(s) 506, 698, 839, 1004, 1008
MaeII ACGT 3 cut(s) 194, 476, 568
MaeIII GTNAC 2 cut(s) 2084, 2101
MalI GATC 8 cut(s) 240, 703, 1203, 1209, 1668, 1839, 1908, 1968
MboI GATC 8 cut(s) 238, 701, 1201, 1207, 1666, 1837, 1906, 1966
MflI RGATCY 4 cut(s) 701, 1201, 1906, 1966
MhlI GDGCHC 4 cut(s) 38, 345, 625, 1664
MlsI TGGCCA 1 cut(s) 2159
MluNI TGGCCA 1 cut(s) 2159
MlyI GAGTC 1 cut(s) 2114
MmeI TCCRAC 5 cut(s) 194, 246, 270, 331, 1861
Mox20I TGGCCA 1 cut(s) 2159
Mph1103I ATGCAT 1 cut(s) 1951
MscI TGGCCA 1 cut(s) 2159
MseI TTAA 8 cut(s) 65, 555, 597, 1440, 1551, 1764, 1815, 2295
MslI CAYNNNNRTG 7 cut(s) 597, 930, 1091, 1486, 1545, 1623, 1961
Msp20I TGGCCA 1 cut(s) 2159
MspA1I CMGCKG 1 cut(s) 136
MspI CCGG 4 cut(s) 149, 422, 1687, 2223
MspR9I CCNGG 9 cut(s) 260, 382, 422, 903, 1213, 1254, 1588, 1608, 1688
Mva1269I GAATGC 1 cut(s) 1077
MvaI CCWGG 7 cut(s) 260, 382, 903, 1213, 1254, 1588, 1608
MvnI CGCG 2 cut(s) 136, 897
MwoI GCNNNNNNNGC 2 cut(s) 287, 903
NciI CCSGG 2 cut(s) 422, 1688
NdeI CATATG 1 cut(s) 1633
NdeII GATC 8 cut(s) 238, 701, 1201, 1207, 1666, 1837, 1906, 1966
NlaIV GGNNCC 7 cut(s) 50, 153, 204, 378, 379, 1935, 1968
NsiI ATGCAT 1 cut(s) 1951
NspI RCATGY 6 cut(s) 470, 596, 1096, 1342, 1953, 2181
PaeI GCATGC 1 cut(s) 1953
PaeR7I CTCGAG 1 cut(s) 2122
PagI TCATGA 1 cut(s) 2116
PciI ACATGT 4 cut(s) 592, 1092, 1338, 2177
PciSI GCTCTTC 1 cut(s) 12
PctI GAATGC 1 cut(s) 1077
PfeI GAWTC 8 cut(s) 444, 664, 854, 1353, 1394, 1478, 1733, 1987
PflMI CCANNNNNTGG 1 cut(s) 872
PkrI GCNGC 6 cut(s) 302, 1368, 1805, 1888, 1921, 2146
PleI GAGTC 1 cut(s) 2114
PpsI GAGTC 1 cut(s) 2114
Ppu21I YACGTR 1 cut(s) 477
PpuMI RGGWCCY 4 cut(s) 48, 202, 377, 559
PscI ACATGT 4 cut(s) 592, 1092, 1338, 2177
PsiI TTATAA 1 cut(s) 791
Psp5II RGGWCCY 4 cut(s) 48, 202, 377, 559
Psp6I CCWGG 7 cut(s) 258, 380, 901, 1211, 1252, 1586, 1606
PspFI CCCAGC 1 cut(s) 1970
PspGI CCWGG 7 cut(s) 258, 380, 901, 1211, 1252, 1586, 1606
PspN4I GGNNCC 7 cut(s) 50, 153, 204, 378, 379, 1935, 1968
PspPI GGNCC 7 cut(s) 48, 138, 151, 202, 377, 559, 1111
PspPPI RGGWCCY 4 cut(s) 48, 202, 377, 559
PspXI VCTCGAGB 1 cut(s) 2122
PstNI CAGNNNCTG 1 cut(s) 753
PsuI RGATCY 4 cut(s) 701, 1201, 1906, 1966
RsaI GTAC 8 cut(s) 165, 475, 591, 637, 909, 1574, 1830, 1901
RsaNI GTAC 8 cut(s) 164, 474, 590, 636, 908, 1573, 1829, 1900
RseI CAYNNNNRTG 7 cut(s) 597, 930, 1091, 1486, 1545, 1623, 1961
SacII CCGCGG 1 cut(s) 137
SapI GCTCTTC 1 cut(s) 12
SaqAI TTAA 8 cut(s) 65, 555, 597, 1440, 1551, 1764, 1815, 2295
SatI GCNGC 6 cut(s) 301, 1367, 1804, 1887, 1920, 2145
Sau3AI GATC 8 cut(s) 238, 701, 1201, 1207, 1666, 1837, 1906, 1966
Sau96I GGNCC 7 cut(s) 48, 138, 151, 202, 377, 559, 1111
ScaI AGTACT 1 cut(s) 637
SchI GAGTC 1 cut(s) 2114
ScrFI CCNGG 9 cut(s) 260, 382, 422, 903, 1213, 1254, 1588, 1608, 1688
SduI GDGCHC 4 cut(s) 38, 345, 625, 1664
SfaNI GCATC 6 cut(s) 268, 1001, 1114, 1192, 1302, 1936
Sfr274I CTCGAG 1 cut(s) 2122
Sfr303I CCGCGG 1 cut(s) 137
SgrBI CCGCGG 1 cut(s) 137
SinI GGWCC 6 cut(s) 48, 151, 202, 377, 559, 1111
SlaI CTCGAG 1 cut(s) 2122
SmiMI CAYNNNNRTG 7 cut(s) 597, 930, 1091, 1486, 1545, 1623, 1961
SmlI CTYRAG 3 cut(s) 2044, 2073, 2122
SmoI CTYRAG 3 cut(s) 2044, 2073, 2122
SpeI ACTAGT 1 cut(s) 838
SphI GCATGC 1 cut(s) 1953
SsiI CCGC 3 cut(s) 134, 136, 146
SspI AATATT 1 cut(s) 939
SspMI CTAG 5 cut(s) 506, 698, 839, 1004, 1008
StyD4I CCNGG 9 cut(s) 258, 380, 420, 901, 1211, 1252, 1586, 1606, 1686
TaaI ACNGT 8 cut(s) 175, 212, 727, 796, 912, 1032, 1289, 1572
TaiI ACGT 3 cut(s) 197, 479, 571
TaqI TCGA 4 cut(s) 481, 1778, 2123, 2167
TaqII GACCGA 1 cut(s) 1590
TatI WGTACW 4 cut(s) 589, 635, 1572, 1828
TfiI GAWTC 8 cut(s) 444, 664, 854, 1353, 1394, 1478, 1733, 1987
Tru1I TTAA 8 cut(s) 65, 555, 597, 1440, 1551, 1764, 1815, 2295
Tru9I TTAA 8 cut(s) 65, 555, 597, 1440, 1551, 1764, 1815, 2295
TscAI CASTG 2 cut(s) 730, 1669
TseI GCWGC 6 cut(s) 300, 1366, 1803, 1886, 1919, 2144
TspDTI ATGAA 9 cut(s) 274, 532, 807, 1005, 1163, 1227, 1439, 2013, 2105
TspGWI ACGGA 2 cut(s) 1363, 1635
TspRI CASTG 2 cut(s) 730, 1669
Van91I CCANNNNNTGG 1 cut(s) 872
VneI GTGCAC 1 cut(s) 1660
VpaK11BI GGWCC 6 cut(s) 48, 151, 202, 377, 559, 1111
XagI CCTNNNNNAGG 1 cut(s) 257
XapI RAATTY 6 cut(s) 483, 831, 1234, 1276, 1774, 2003
XceI RCATGY 6 cut(s) 470, 596, 1096, 1342, 1953, 2181
XcmI CCANNNNNNNNNTGG 1 cut(s) 754
XhoI CTCGAG 1 cut(s) 2122
XmiI GTMKAC 1 cut(s) 1873
XspI CTAG 5 cut(s) 506, 698, 839, 1004, 1008
ZrmI AGTACT 1 cut(s) 637
Zsp2I ATGCAT 1 cut(s) 1951
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.