Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0005119

Physical Location & Seq

Genomic Coordinates Reverse (-)

12215113 .. 12222120

Gene Structure 7008 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000006970

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2622 bp

ATGGCGCCGAGGCTCGGCTCCGGCGACGTGTCCGGCTTCAAGTTCCTTCTCTTTCTTGTCTCGATTTACGGCCTCATCGCCGTCCTGGTGCACTCGATTCTCCACATGCGCTTCATTACGCCGCTTGGGATCGACGCGCCGCTCGATCGATTCTCCGAGGCTCGAGCCGTCGAGCACGTTCGAGTCCTGGCCAAAGATATCGATAGCCGCCAGGAAGGGAGTCCTGGATTGAGAGAAGCTGCTCGATATATTATAGCGCAGTTGGAGATGGTAAAGGAGCGAGCCGGACCTAACTTTAGAGTTGAGATAGAAGAGACTGTTGTGAATGGCACATTTAATATGCTGTTTTTAGGCTATAGCATATCTCTGGGGTACAGAAACCACACAAATATTGTGATGAGAATATCATCAGTAGATTCCCAAGACTCGGACCCGTCGGTATTGTTGAATGGCCATTTTGATAGTCCACTTGGTTCTCCGGGTGCTGGTGATTGTGGTTCATGTGTAGCATCAATGCTGGAAATAGCAAGACTTATTGTGGATTCTGGATGGGTTCCCCCTCAGCCTGTTATTTTTCTTTTTAATGGTGCAGAAGAGCTCTTTTTGCTGGGGTCTCATGGCTTCATGAAGACACATAAATGGCGTGAAACTATTGGGGCTTTTATAAATGTTGAAGCGTCGGGGACAGGCGGTCCTGATTTAGTTTGCCAATCAGGACCTAGTTCCTGGCCTTCTCAGGTCTATGCTCAATCAGCAGTATATCCCATGGCACATAGCGCAGCTCAGGATGTTTTTCCTGTTGTTCCTGGAGATACAGATTTTCGAATATTTTCCGAGGACTATGGTGACATTCCTGGCTTGGATATTATCTTTCTTCTTGGTGGTTATTTTTATCATACATCCTTCGATACAGTGGAGAGACTATTACCTGGAAGTATACAAGCTCGTGGAGAAAATCTATTTAGCATACTTAAAACCTTCACCACTTCTTCTACGCTACAAAATACCTTCGAAAGACATTCTAATGTATCAACTGCTAAGCAGCATGAGGATGGACGTGCTGTTTTCTTTGATTATTTAACATGGTTCATGATATACTATTCTCGGAAGGTAGCTATGGTACTTCACCCTATTCCTATTGGCATCTTCCTGGCTATGTCATTTTTCTCACAAAAGCAGAATCCTGGGCTCCTACCTTGGTTTGCTACTTTCTGCAATTTTGTAAAAGGAATGCTTTTCCATGCTGCTGGGGTTTTTCTAGCAATTGTAATTCCGGTTATCTTTTCCATCGTGAGATTGTTGTTTACTAGTCGTGCAATGAACTGGTTTGCTCATCCATATTTGGCTTATTTGATGTTCATACCCTGCTCTCTTGTTGGTCTGTTAATTCCAAGATTTGTTTGGAGAAGCTTTCCCCTCACTCAAGAGGCATCAGTTGTCAAGTCTTTAAAAGAGGCTTTATCAGATGAAGCAAGGTTCTGGGGAGCTTTTGGATTATACGCTACAATAACTGTGGCTTACCTGTATGCTGGGTTGAGCGGAGGCTTCTTGACTTTTTCACTGTCCGTTTCTATGCTTCTTGGATGGATTTCATATTGTTTAGCAGTCAAATTATTTGGTCGCCAATCACTCAGGTCAACGTTATTTTATATGTTACCTATACTTCCATGCCTTGCATACTCTGTGTATTTTGGTGCATTTCTTGTCCAGTTTTTGGTTGAAAAGATGGGTATGATGGGTGCTTTGCCACCTCCATATGGTTATTTCGTTCCTGACATTGTGGTGGCTGCAGTAATTGGAGTTGTGACCAGTTGGTCTGTAGGCCCTCTGATACCTATTTGTGGTCACTGGTTAGCCAGGTCATCCATTTTGCAAGTCTTGTTGCATCTTAGTGTGCTAGGCTTGGCTCTGTCATCTCAGTTCTTTCCATATAGCACGGCTGCACCTAAGAGAGTTGTCTTCCAGCATACTTTTCTTACTGCAGATGCAAATCATGTTGTGGAGTCCAGCTATGATTTTTCTGTTGTGGATTCCAATTCGTTACTTTTTCTTTTCAAACATGCACCTGAGGTGGCAAAGGAATTGCACATTAGTTCAGAGTTATCTTTTGAAACTGCAAAGTCATCTCACCGAGAGACTTGGATGGGACTTTTTCCTGTTTCTTGTTTGTTCTCAAGAAGCTTGAAGTTCCCTGCAAGAAGTGATGGCATTTTAAAGCAATACGGGCGGTTCCCTCATCTATCCACTTATAAGCCACATACAGCATTTGGCGAGGAATCTCGGAGAATATACTTGGAACTATCTTTAGGTTCCTTAGAGGAGGTTTGGGTTGCAGTCCTCAATATTACAGGCCCTTTATCTAGTTGGTCATTTGCAGACAATACACTTCCAGCTACTGAAACATCTGATGGAGGTCCACCATCATACATATGTCGACTTAGTGGAGCTAGTCCTGAGAATTGGACCTTCTGGTTAGAGGCTAACAGTTCTGAAGATCTAAGGGTAGAAGTTGCTGTTGTAGATCAATATATGGTTGATGTAGCAAAGAAGCTGAAAGGGCTTTTTCCGGAGTGGGTGGATGTAGTTGCTTATTCTGGCTTTTTGTCGAGTTATAATTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001541 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0007275 GO:0007548 GO:0008150 GO:0008406 GO:0008585 GO:0012505 GO:0022414 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045137 GO:0046545 GO:0046660 GO:0048513 GO:0048608 GO:0048731 GO:0048856 GO:0061458

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M28

Protein Analysis

874

Amino Acids

96.81

Weight (kDa)

6.04

Isoelectric Point (pI)

38.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M28	PF04389	130 - 321	5.7e-44	Peptidase family M28
ERMP1_C	PF22248	648 - 871	3.4e-30	Endoplasmic reticulum metallopeptidase 1, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005119)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67420 AT1G67420 AT1G67420 AT1G67420 AT1G67420 AT1G67420
fragaria_vesca	FvH4_4g23910 FvH4_4g23910 FvH4_4g23910 FvH4_4g23910 FvH4_4g23910 FvH4_4g23910
malus_domestica	MD13G1117700.v1.1 MD16G1117900.v1.1
prunus_persica	Prupe.1G227300_v2.0.a1 Prupe.1G227300_v2.0.a1 Prupe.1G227300_v2.0.a1
pyrus_communis	pycom13g10180 pycom16g10100
rosa_chinensis	RchiOBHm_Chr4g0430551
rosa_laevigata	RLG00000006970
rosa_multiflora	Rmu_sc0011782.1_g000005
rosa_roxburghii	Rroxscaffold_5G00372320
rosa_rugosa	Rorug04G0244100 Rorug04G0244200
rosa_samantha	Rh4AG300200 Rh4BG307300 Rh4CG324000 Rh4DG304600
rosa_wichuraiana	Rw4G026050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	665, 2250, 2613
AasI	GACNNNNNNGTC	1 cut(s)	1813
AccB1I	GGYRCC	1 cut(s)	4
AccB7I	CCANNNNNTGG	1 cut(s)	1714
AccBSI	CCGCTC	2 cut(s)	142, 1539
AccI	GTMKAC	2 cut(s)	937, 2434
AccII	CGCG	1 cut(s)	137
AccIII	TCCGGA	1 cut(s)	2566
AciI	CCGC	6 cut(s)	122, 140, 208, 690, 1539, 2227
AclI	AACGTT	1 cut(s)	1640
AclWI	GGATC	1 cut(s)	137
AcoI	YGGCCR	2 cut(s)	189, 451
AcuI	CTGAAG	1 cut(s)	2511
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	2 cut(s)	374, 1122
AfiI	CCNNNNNNNGG	6 cut(s)	14, 427, 485, 1714, 1757, 1841
AflIII	ACRYGT	1 cut(s)	27
AgsI	TTSAA	7 cut(s)	40, 448, 674, 1721, 2056, 2111, 2185
AhdI	GACNNNNNGTC	1 cut(s)	690
AhlI	ACTAGT	1 cut(s)	1307
AjiI	CACGTC	2 cut(s)	28, 1058
Alw21I	GWGCWC	3 cut(s)	93, 177, 600
Alw26I	GTCTC	5 cut(s)	64, 308, 618, 913, 2129
Alw44I	GTGCAC	1 cut(s)	89
AlwI	GGATC	1 cut(s)	137
AlwNI	CAGNNNCTG	1 cut(s)	2396
Ama87I	CYCGRG	1 cut(s)	162
Aor13HI	TCCGGA	1 cut(s)	2566
AoxI	GGCC	6 cut(s)	70, 189, 451, 728, 1822, 2350
ApaLI	GTGCAC	1 cut(s)	89
ApeKI	GCWGC	6 cut(s)	239, 779, 1042, 1244, 1787, 1940
Asp700I	GAANNNNTTC	1 cut(s)	829
AspLEI	GCGC	5 cut(s)	7, 111, 139, 259, 779
AspS9I	GGNCC	8 cut(s)	287, 430, 692, 716, 1823, 2351, 2414, 2463
AsuC2I	CCSGG	1 cut(s)	480
AsuHPI	GGTGA	5 cut(s)	500, 857, 973, 1118, 2120
AsuII	TTCGAA	2 cut(s)	823, 1011
AvaI	CYCGRG	1 cut(s)	162
AvaII	GGWCC	6 cut(s)	287, 430, 692, 716, 2414, 2463
AxyI	CCTNAGG	1 cut(s)	2067
BaeGI	GKGCMC	1 cut(s)	93
BalI	TGGCCA	2 cut(s)	191, 453
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	2 cut(s)	600, 1191
BauI	CACGAG	1 cut(s)	945
BbsI	GAAGAC	2 cut(s)	635, 1951
Bbv12I	GWGCWC	3 cut(s)	93, 177, 600
BbvCI	CCTCAGC	1 cut(s)	561
BbvI	GCAGC	6 cut(s)	226, 791, 1054, 1231, 1774, 1927
BceAI	ACGGC	4 cut(s)	65, 85, 152, 1953
BcnI	CCSGG	1 cut(s)	480
BcoDI	GTCTC	5 cut(s)	64, 308, 618, 913, 2129
BcuI	ACTAGT	1 cut(s)	1307
BfaI	CTAG	7 cut(s)	720, 1259, 1308, 1898, 2361, 2448, 2620
BfmI	CTRYAG	4 cut(s)	355, 1788, 1818, 1980
BfoI	RGCGCY	1 cut(s)	8
BglII	AGATCT	1 cut(s)	2494
BisI	GCNGC	9 cut(s)	122, 140, 208, 240, 780, 1043, 1245, 1788, 1941
BlpI	GCTNAGC	1 cut(s)	1038
BlsI	GCNGC	9 cut(s)	123, 141, 209, 241, 781, 1044, 1246, 1789, 1942
Bme18I	GGWCC	6 cut(s)	287, 430, 692, 716, 2414, 2463
BmeRI	GACNNNNNGTC	1 cut(s)	690
BmeT110I	CYCGRG	1 cut(s)	162
BmgBI	CACGTC	2 cut(s)	28, 1058
BmgT120I	GGNCC	8 cut(s)	287, 430, 692, 716, 1823, 2351, 2414, 2463
BmiI	GGNNCC	7 cut(s)	6, 19, 432, 555, 1190, 2231, 2311
BmsI	GCATC	5 cut(s)	518, 1152, 1439, 1894, 1975
BpiI	GAAGAC	2 cut(s)	635, 1951
BpmI	CTGGAG	1 cut(s)	828
Bpu10I	CCTNAGC	2 cut(s)	561, 783
Bpu1102I	GCTNAGC	1 cut(s)	1038
Bpu14I	TTCGAA	2 cut(s)	823, 1011
BpuEI	CTTGAG	2 cut(s)	1407, 2158
BpuMI	CCSGG	1 cut(s)	480
Bsa29I	ATCGAT	2 cut(s)	148, 201
BsaBI	GATNNNNATC	1 cut(s)	1989
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	1 cut(s)	618
BsaJI	CCNNGG	6 cut(s)	8, 156, 765, 834, 1184, 1196
BsaWI	WCCGGW	2 cut(s)	1273, 2566
Bsc4I	CCNNNNNNNGG	6 cut(s)	14, 427, 485, 1714, 1757, 1841
Bse1I	ACTGG	4 cut(s)	1328, 1708, 1809, 1853
Bse21I	CCTNAGG	1 cut(s)	2067
Bse3DI	GCAATG	1 cut(s)	1323
Bse8I	GATNNNNATC	1 cut(s)	1989
BseAI	TCCGGA	1 cut(s)	2566
BseCI	ATCGAT	2 cut(s)	148, 201
BseDI	CCNNGG	6 cut(s)	8, 156, 765, 834, 1184, 1196
BseGI	GGATG	9 cut(s)	554, 793, 899, 1057, 1333, 1589, 1862, 2148, 2584
BseJI	GATNNNNATC	1 cut(s)	1989
BseLI	CCNNNNNNNGG	6 cut(s)	14, 427, 485, 1714, 1757, 1841
BseMI	GCAATG	1 cut(s)	1323
BseMII	CTCAG	7 cut(s)	575, 749, 797, 1645, 1931, 2058, 2445
BseNI	ACTGG	4 cut(s)	1328, 1708, 1809, 1853
BseRI	GAGGAG	1 cut(s)	2333
BseSI	GKGCMC	1 cut(s)	93
BseXI	GCAGC	6 cut(s)	226, 791, 1054, 1231, 1774, 1927
BseYI	CCCAGC	3 cut(s)	607, 1247, 1529
BsgI	GTGCAG	2 cut(s)	609, 1926
Bsh1236I	CGCG	1 cut(s)	137
Bsh1285I	CGRYCG	1 cut(s)	148
BshFI	GGCC	6 cut(s)	72, 191, 453, 730, 1824, 2352
BshNI	GGYRCC	1 cut(s)	4
BshVI	ATCGAT	2 cut(s)	148, 201
BsiEI	CGRYCG	1 cut(s)	148
BsiHKAI	GWGCWC	3 cut(s)	93, 177, 600
BsiHKCI	CYCGRG	1 cut(s)	162
BsiSI	CCGG	6 cut(s)	21, 33, 285, 479, 1274, 2567
BslFI	GGGAC	2 cut(s)	697, 2160
BslI	CCNNNNNNNGG	6 cut(s)	14, 427, 485, 1714, 1757, 1841
BsmAI	GTCTC	5 cut(s)	64, 308, 618, 913, 2129
BsmFI	GGGAC	2 cut(s)	697, 2160
BsmI	GAATGC	1 cut(s)	1236
BsnI	GGCC	6 cut(s)	72, 191, 453, 730, 1824, 2352
Bso31I	GGTCTC	1 cut(s)	618
BsoBI	CYCGRG	1 cut(s)	162
Bsp119I	TTCGAA	2 cut(s)	823, 1011
Bsp1286I	GDGCHC	4 cut(s)	93, 177, 600, 1191
Bsp13I	TCCGGA	1 cut(s)	2566
Bsp143I	GATC	4 cut(s)	129, 145, 2494, 2521
Bsp1720I	GCTNAGC	1 cut(s)	1038
Bsp19I	CCATGG	1 cut(s)	765
BspACI	CCGC	6 cut(s)	122, 140, 208, 690, 1539, 2227
BspANI	GGCC	6 cut(s)	72, 191, 453, 730, 1824, 2352
BspCNI	CTCAG	7 cut(s)	574, 748, 796, 1644, 1930, 2059, 2446
BspDI	ATCGAT	2 cut(s)	148, 201
BspEI	TCCGGA	1 cut(s)	2566
BspFNI	CGCG	1 cut(s)	137
BspHI	TCATGA	2 cut(s)	624, 1089
BspLI	GGNNCC	7 cut(s)	6, 19, 432, 555, 1190, 2231, 2311
BspMAI	CTGCAG	2 cut(s)	1792, 1984
BspPI	GGATC	1 cut(s)	137
BspQI	GCTCTTC	1 cut(s)	588
BspT104I	TTCGAA	2 cut(s)	823, 1011
BspT107I	GGYRCC	1 cut(s)	4
BspTNI	GGTCTC	1 cut(s)	618
BsrBI	CCGCTC	2 cut(s)	142, 1539
BsrDI	GCAATG	1 cut(s)	1323
BsrI	ACTGG	4 cut(s)	1328, 1708, 1809, 1853
BssECI	CCNNGG	6 cut(s)	8, 156, 765, 834, 1184, 1196
BssMI	GATC	4 cut(s)	129, 145, 2494, 2521
BssNAI	GTATAC	1 cut(s)	938
BssNI	GRCGYC	1 cut(s)	5
BssSI	CACGAG	1 cut(s)	945
BssT1I	CCWWGG	2 cut(s)	765, 1196
Bst1107I	GTATAC	1 cut(s)	938
Bst2BI	CACGAG	1 cut(s)	945
Bst4CI	ACNGT	5 cut(s)	319, 913, 1513, 1563, 2486
Bst6I	CTCTTC	2 cut(s)	306, 588
BstACI	GRCGYC	1 cut(s)	5
BstBI	TTCGAA	2 cut(s)	823, 1011
BstC8I	GCNNGC	1 cut(s)	282
BstDSI	CCRYGG	1 cut(s)	765
BstF5I	GGATG	9 cut(s)	554, 793, 899, 1057, 1333, 1589, 1862, 2148, 2584
BstFNI	CGCG	1 cut(s)	137
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	5 cut(s)	7, 111, 139, 259, 779
BstKTI	GATC	4 cut(s)	132, 148, 2497, 2524
BstMAI	GTCTC	5 cut(s)	64, 308, 618, 913, 2129
BstMBI	GATC	4 cut(s)	129, 145, 2494, 2521
BstMCI	CGRYCG	1 cut(s)	148
BstMWI	GCNNNNNNNGC	5 cut(s)	604, 752, 776, 2224, 2557
BstNSI	RCATGY	2 cut(s)	109, 2063
BstSFI	CTRYAG	4 cut(s)	355, 1788, 1818, 1980
BstSLI	GKGCMC	1 cut(s)	93
BstUI	CGCG	1 cut(s)	137
BstV1I	GCAGC	6 cut(s)	226, 791, 1054, 1231, 1774, 1927
BstV2I	GAAGAC	2 cut(s)	635, 1951
BstX2I	RGATCY	1 cut(s)	2494
BstXI	CCANNNNNNTGG	1 cut(s)	1247
BstYI	RGATCY	1 cut(s)	2494
BstZ17I	GTATAC	1 cut(s)	938
Bsu15I	ATCGAT	2 cut(s)	148, 201
Bsu36I	CCTNAGG	1 cut(s)	2067
BsuRI	GGCC	6 cut(s)	72, 191, 453, 730, 1824, 2352
BsuTUI	ATCGAT	2 cut(s)	148, 201
BtgI	CCRYGG	1 cut(s)	765
BtgZI	GCGATG	1 cut(s)	61
BtrI	CACGTC	2 cut(s)	28, 1058
BtsCI	GGATG	9 cut(s)	554, 793, 899, 1057, 1333, 1589, 1862, 2148, 2584
BtsIMutI	CAGTG	3 cut(s)	918, 1559, 1846
Cac8I	GCNNGC	1 cut(s)	282
CaiI	CAGNNNCTG	1 cut(s)	2396
CciI	TCATGA	2 cut(s)	624, 1089
CfoI	GCGC	5 cut(s)	7, 111, 139, 259, 779
Cfr13I	GGNCC	8 cut(s)	287, 430, 692, 716, 1823, 2351, 2414, 2463
ClaI	ATCGAT	2 cut(s)	148, 201
CseI	GACGC	2 cut(s)	143, 666
Csp6I	GTAC	2 cut(s)	373, 1121
CspCI	CAANNNNNGTGG	2 cut(s)	1494, 1529
CviQI	GTAC	2 cut(s)	373, 1121
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	4 cut(s)	131, 147, 2496, 2523
DpnII	GATC	4 cut(s)	129, 145, 2494, 2521
DraI	TTTAAA	2 cut(s)	1449, 2214
DrdI	GACNNNNNNGTC	1 cut(s)	1813
DriI	GACNNNNNGTC	1 cut(s)	690
DseDI	GACNNNNNNGTC	1 cut(s)	1813
EaeI	YGGCCR	2 cut(s)	189, 451
Eam1104I	CTCTTC	2 cut(s)	306, 588
Eam1105I	GACNNNNNGTC	1 cut(s)	690
EarI	CTCTTC	2 cut(s)	306, 588
Ecl136II	GAGCTC	1 cut(s)	598
Eco130I	CCWWGG	2 cut(s)	765, 1196
Eco24I	GRGCYC	2 cut(s)	600, 1191
Eco31I	GGTCTC	1 cut(s)	618
Eco32I	GATATC	1 cut(s)	199
Eco47I	GGWCC	6 cut(s)	287, 430, 692, 716, 2414, 2463
Eco53kI	GAGCTC	1 cut(s)	598
Eco57I	CTGAAG	1 cut(s)	2511
Eco81I	CCTNAGG	1 cut(s)	2067
Eco88I	CYCGRG	1 cut(s)	162
EcoICRI	GAGCTC	1 cut(s)	598
EcoO109I	RGGNCCY	3 cut(s)	716, 1823, 2351
EcoRV	GATATC	1 cut(s)	199
EcoT14I	CCWWGG	2 cut(s)	765, 1196
EcoT38I	GRGCYC	2 cut(s)	600, 1191
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	2 cut(s)	765, 1196
FalI	AAGNNNNNCTT	2 cut(s)	1218, 1250
FaqI	GGGAC	2 cut(s)	697, 2160
FauNDI	CATATG	2 cut(s)	1756, 2429
FblI	GTMKAC	2 cut(s)	937, 2434
Fnu4HI	GCNGC	9 cut(s)	122, 140, 208, 240, 780, 1043, 1245, 1788, 1941
FokI	GGATG	9 cut(s)	561, 800, 886, 1064, 1320, 1596, 1849, 2155, 2591
FriOI	GRGCYC	2 cut(s)	600, 1191
Fsp4HI	GCNGC	9 cut(s)	122, 140, 208, 240, 780, 1043, 1245, 1788, 1941
FspBI	CTAG	7 cut(s)	720, 1259, 1308, 1898, 2361, 2448, 2620
GlaI	GCGC	5 cut(s)	6, 110, 138, 258, 778
GluI	GCNGC	9 cut(s)	122, 140, 208, 240, 780, 1043, 1245, 1788, 1941
GsaI	CCCAGC	3 cut(s)	611, 1251, 1533
GsuI	CTGGAG	1 cut(s)	828
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	6 cut(s)	72, 191, 453, 730, 1824, 2352
HapII	CCGG	6 cut(s)	21, 33, 285, 479, 1274, 2567
HgaI	GACGC	2 cut(s)	143, 666
HhaI	GCGC	5 cut(s)	7, 111, 139, 259, 779
Hin1I	GRCGYC	1 cut(s)	5
Hin6I	GCGC	5 cut(s)	5, 109, 137, 257, 777
HinP1I	GCGC	5 cut(s)	5, 109, 137, 257, 777
HincII	GTYRAC	2 cut(s)	1638, 2435
HindII	GTYRAC	2 cut(s)	1638, 2435
HindIII	AAGCTT	2 cut(s)	1408, 2179
HpaII	CCGG	6 cut(s)	21, 33, 285, 479, 1274, 2567
HphI	GGTGA	5 cut(s)	500, 857, 973, 1118, 2120
Hpy166II	GTNNAC	7 cut(s)	91, 467, 938, 1305, 1638, 2417, 2435
Hpy8I	GTNNAC	7 cut(s)	91, 467, 938, 1305, 1638, 2417, 2435
Hpy99I	CGWCG	5 cut(s)	29, 137, 173, 439, 682
HpyAV	CCTTC	8 cut(s)	56, 209, 741, 913, 988, 1018, 1102, 2476
HpyCH4III	ACNGT	5 cut(s)	319, 913, 1513, 1563, 2486
HpyCH4IV	ACGT	4 cut(s)	27, 177, 1057, 1640
HpyF10VI	GCNNNNNNNGC	5 cut(s)	604, 752, 776, 2224, 2557
HpySE526I	ACGT	4 cut(s)	27, 177, 1057, 1640
Hsp92I	GRCGYC	1 cut(s)	5
HspAI	GCGC	5 cut(s)	5, 109, 137, 257, 777
KasI	GGCGCC	1 cut(s)	4
Kpn2I	TCCGGA	1 cut(s)	2566
Kzo9I	GATC	4 cut(s)	129, 145, 2494, 2521
LguI	GCTCTTC	1 cut(s)	588
LmnI	GCTCC	5 cut(s)	23, 277, 1194, 1484, 2444
Lsp1109I	GCAGC	6 cut(s)	226, 791, 1054, 1231, 1774, 1927
LweI	GCATC	5 cut(s)	518, 1152, 1439, 1894, 1975
MaeI	CTAG	7 cut(s)	720, 1259, 1308, 1898, 2361, 2448, 2620
MaeII	ACGT	4 cut(s)	27, 177, 1057, 1640
MaeIII	GTNAC	5 cut(s)	845, 1653, 1804, 1844, 2040
MalI	GATC	4 cut(s)	131, 147, 2496, 2523
MbiI	CCGCTC	2 cut(s)	142, 1539
MboI	GATC	4 cut(s)	129, 145, 2494, 2521
MboII	GAAGA	8 cut(s)	323, 605, 640, 866, 981, 1138, 1951, 2504
MfeI	CAATTG	1 cut(s)	1263
MflI	RGATCY	1 cut(s)	2494
MhlI	GDGCHC	4 cut(s)	93, 177, 600, 1191
MlsI	TGGCCA	2 cut(s)	191, 453
MluNI	TGGCCA	2 cut(s)	191, 453
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	4 cut(s)	192, 229, 419, 2012
MmeI	TCCRAC	1 cut(s)	243
Mox20I	TGGCCA	2 cut(s)	191, 453
MroI	TCCGGA	1 cut(s)	2566
MroXI	GAANNNNTTC	1 cut(s)	829
MscI	TGGCCA	2 cut(s)	191, 453
MseI	TTAA	7 cut(s)	336, 582, 972, 1079, 1385, 1448, 2213
MslI	CAYNNNNRTG	6 cut(s)	637, 1023, 1050, 1781, 1890, 2428
Msp20I	TGGCCA	2 cut(s)	191, 453
MspI	CCGG	6 cut(s)	21, 33, 285, 479, 1274, 2567
MunI	CAATTG	1 cut(s)	1263
Mva1269I	GAATGC	1 cut(s)	1236
MvnI	CGCG	1 cut(s)	137
MwoI	GCNNNNNNNGC	5 cut(s)	604, 752, 776, 2224, 2557
NarI	GGCGCC	1 cut(s)	5
NciI	CCSGG	1 cut(s)	480
NcoI	CCATGG	1 cut(s)	765
NdeI	CATATG	2 cut(s)	1756, 2429
NdeII	GATC	4 cut(s)	129, 145, 2494, 2521
NlaIV	GGNNCC	7 cut(s)	6, 19, 432, 555, 1190, 2231, 2311
NmeAIII	GCCGAG	1 cut(s)	33
NmuCI	GTSAC	3 cut(s)	845, 1804, 1844
NspI	RCATGY	2 cut(s)	109, 2063
NspV	TTCGAA	2 cut(s)	823, 1011
PaeR7I	CTCGAG	1 cut(s)	162
PagI	TCATGA	2 cut(s)	624, 1089
PciSI	GCTCTTC	1 cut(s)	588
PcsI	WCGNNNNNNNCGW	2 cut(s)	21, 141
PctI	GAATGC	1 cut(s)	1236
PdmI	GAANNNNTTC	1 cut(s)	829
PfeI	GAWTC	7 cut(s)	97, 150, 416, 542, 1180, 2030, 2276
PflMI	CCANNNNNTGG	1 cut(s)	1714
PfoI	TCCNGGA	2 cut(s)	223, 805
PkrI	GCNGC	9 cut(s)	123, 141, 209, 241, 781, 1044, 1246, 1789, 1942
Ple19I	CGATCG	1 cut(s)	148
PleI	GAGTC	4 cut(s)	191, 228, 419, 2011
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	4 cut(s)	191, 228, 419, 2011
PpuMI	RGGWCCY	1 cut(s)	716
PsiI	TTATAA	3 cut(s)	665, 2250, 2613
Psp124BI	GAGCTC	1 cut(s)	600
Psp1406I	AACGTT	1 cut(s)	1640
Psp5II	RGGWCCY	1 cut(s)	716
PspFI	CCCAGC	3 cut(s)	607, 1247, 1529
PspN4I	GGNNCC	7 cut(s)	6, 19, 432, 555, 1190, 2231, 2311
PspPI	GGNCC	8 cut(s)	287, 430, 692, 716, 1823, 2351, 2414, 2463
PspPPI	RGGWCCY	1 cut(s)	716
PspXI	VCTCGAGB	1 cut(s)	162
PstI	CTGCAG	2 cut(s)	1792, 1984
PstNI	CAGNNNCTG	1 cut(s)	2396
PsuI	RGATCY	1 cut(s)	2494
PvuI	CGATCG	1 cut(s)	148
RsaI	GTAC	2 cut(s)	374, 1122
RsaNI	GTAC	2 cut(s)	373, 1121
RseI	CAYNNNNRTG	6 cut(s)	637, 1023, 1050, 1781, 1890, 2428
SacI	GAGCTC	1 cut(s)	600
SalI	GTCGAC	1 cut(s)	2433
SapI	GCTCTTC	1 cut(s)	588
SaqAI	TTAA	7 cut(s)	336, 582, 972, 1079, 1385, 1448, 2213
SatI	GCNGC	9 cut(s)	122, 140, 208, 240, 780, 1043, 1245, 1788, 1941
Sau3AI	GATC	4 cut(s)	129, 145, 2494, 2521
Sau96I	GGNCC	8 cut(s)	287, 430, 692, 716, 1823, 2351, 2414, 2463
SchI	GAGTC	4 cut(s)	192, 229, 419, 2012
SduI	GDGCHC	4 cut(s)	93, 177, 600, 1191
SfaNI	GCATC	5 cut(s)	518, 1152, 1439, 1894, 1975
SfcI	CTRYAG	4 cut(s)	355, 1788, 1818, 1980
SfoI	GGCGCC	1 cut(s)	6
Sfr274I	CTCGAG	1 cut(s)	162
SfuI	TTCGAA	2 cut(s)	823, 1011
SinI	GGWCC	6 cut(s)	287, 430, 692, 716, 2414, 2463
SlaI	CTCGAG	1 cut(s)	162
SmiMI	CAYNNNNRTG	6 cut(s)	637, 1023, 1050, 1781, 1890, 2428
SmlI	CTYRAG	3 cut(s)	162, 1422, 2173
SmoI	CTYRAG	3 cut(s)	162, 1422, 2173
SpeI	ACTAGT	1 cut(s)	1307
SsiI	CCGC	6 cut(s)	122, 140, 208, 690, 1539, 2227
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	3 cut(s)	391, 828, 2344
SspMI	CTAG	7 cut(s)	720, 1259, 1308, 1898, 2361, 2448, 2620
SstI	GAGCTC	1 cut(s)	600
StyI	CCWWGG	2 cut(s)	765, 1196
TaaI	ACNGT	5 cut(s)	319, 913, 1513, 1563, 2486
TaiI	ACGT	4 cut(s)	30, 180, 1060, 1643
TauI	GCSGC	3 cut(s)	124, 142, 210
TfiI	GAWTC	7 cut(s)	97, 150, 416, 542, 1180, 2030, 2276
Tru1I	TTAA	7 cut(s)	336, 582, 972, 1079, 1385, 1448, 2213
Tru9I	TTAA	7 cut(s)	336, 582, 972, 1079, 1385, 1448, 2213
TscAI	CASTG	3 cut(s)	918, 1566, 1853
TseFI	GTSAC	3 cut(s)	845, 1804, 1844
TseI	GCWGC	6 cut(s)	239, 779, 1042, 1244, 1787, 1940
Tsp45I	GTSAC	3 cut(s)	845, 1804, 1844
TspDTI	ATGAA	9 cut(s)	103, 489, 613, 641, 1078, 1334, 1348, 1482, 1581
TspGWI	ACGGA	1 cut(s)	1555
TspRI	CASTG	3 cut(s)	918, 1566, 1853
Van91I	CCANNNNNTGG	1 cut(s)	1714
VneI	GTGCAC	1 cut(s)	89
VpaK11BI	GGWCC	6 cut(s)	287, 430, 692, 716, 2414, 2463
XceI	RCATGY	2 cut(s)	109, 2063
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1398
XhoI	CTCGAG	1 cut(s)	162
XmiI	GTMKAC	2 cut(s)	937, 2434
XmnI	GAANNNNTTC	1 cut(s)	829
XspI	CTAG	7 cut(s)	720, 1259, 1308, 1898, 2361, 2448, 2620

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.