Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0011782.1

Orthogroup ID

OG0005119

Physical Location & Seq

Genomic Coordinates Reverse (-)

27355 .. 34246

Gene Structure 6892 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0011782.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1920 bp

atggcgccgaggctcggttccggcgacgtgtccggcttcaagttccttctctttctcgttgcgatttacggactcatcgccgtcctggtgcactcgattctccacatgcgcttcattacgccgcttgggatcgacgcgccgctcgatcgattctccgaggctcgagccgtcgagcacgttcgagtcctggccaaagatatcgatagccgccaggaagggagtcctggattgagagaagctgctcgatatattacagcgcagttggagatggtaaaggagcgagccggacctaactttagagttgagatagaagagactgttgtgaatggtacatttaatatgctgtttttaggctatagcatatctctggggtacagaaaccacacaaatattgtgatgagaatatcatcagtagattcacaagactctgatccatcagtattgttgaatggccattttgatagtccacttggttctccgggtgctggtgattgtgggtcatgtgtagcatcaatgctggaaatagcaagacttattgtggactctggatgggttccccctcagcctgttatttttctttttaatggtgcagaagagctctttttgctggggtctcatggcttcatgaagacacataaatggcgtgaaactattggggcttttataaatgtggaagcgtcggggacaggcggtcctgatttagtttgccaatcaggacctaattcctggccttctcaggtctatgctcaatcagcagtatatcccatggcacatagcgcagcccaggatgtttttcctgttgttccaggagatacagattttcgaatattttccgaggactatggtgacattcctggcttggatattatctttctccttggtggttatttttatcatacatccttcgatacagtggagagactattacctggaagtatacaagctcgtggagaaaatctgtttagcatacttaaagccttcaccaattcttctacgctacaaaatactctcgaaagacattctaatgtatcaactgccaagcagcatgaggatggacgtgctgttttctttgattatttaacatggttcatgatatactattctcggaaggtagctatggtacttcaccctattcctattggcatcttcctggctatgccatttttctcacaaaagcagaatcctgggctcctaccttggtttgctactttcagcaattttgtaaaaggaatgcttttccatgctgctggggtttttctagcaattctaattccggttatcttttccattgtgagattgttgtttgctagtcgtgcaatgaactggtttgctcatccatatttggcttatttgatgttcataccttgctctcttgttggtctgttaattccaagatttgtttggagtagctttctcctcactcaagaggcatcagttgtcaagtctttaaaagaggcattatcggatgaagcaaggttctggggagcttttggattttacgctacaataactgtgcaatacgagcagttccctcatctgtccacttataagccacatacagtatttggcgaggaatctcgtagaatatacttggaactgtctttaggttccttaaaggaggtttgggttgcagtcctcaatattacaggccctttatctagttggtcatttgcagacaataccctttcagctactgaaacatctgatggaggtccaccatcatacatatgccgacttagtggagcaagtcctgagaattggaccttctggttagaggctaacagttctgaagatctaagggtagaagttgctgtcgtagatcaatatatggttgatgaagcaaagaagctgaaagggctttttccggagtgggtggatgtagttgcttattcgggctttttgtcgagttatattttctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001541 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0007275 GO:0007548 GO:0008150 GO:0008406 GO:0008585 GO:0012505 GO:0022414 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045137 GO:0046545 GO:0046660 GO:0048513 GO:0048608 GO:0048731 GO:0048856 GO:0061458

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M28

Protein Analysis

639

Amino Acids

71.03

Weight (kDa)

5.42

Isoelectric Point (pI)

31.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005119)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67420 AT1G67420 AT1G67420 AT1G67420 AT1G67420 AT1G67420
fragaria_vesca	FvH4_4g23910 FvH4_4g23910 FvH4_4g23910 FvH4_4g23910 FvH4_4g23910 FvH4_4g23910
malus_domestica	MD13G1117700.v1.1 MD16G1117900.v1.1
prunus_persica	Prupe.1G227300_v2.0.a1 Prupe.1G227300_v2.0.a1 Prupe.1G227300_v2.0.a1
pyrus_communis	pycom13g10180 pycom16g10100
rosa_chinensis	RchiOBHm_Chr4g0430551
rosa_laevigata	RLG00000006970
rosa_multiflora	Rmu_sc0011782.1_g000005
rosa_roxburghii	Rroxscaffold_5G00372320
rosa_rugosa	Rorug04G0244100 Rorug04G0244200
rosa_samantha	Rh4AG300200 Rh4BG307300 Rh4CG324000 Rh4DG304600
rosa_wichuraiana	Rw4G026050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	665, 1548
AccB1I	GGYRCC	1 cut(s)	4
AccBSI	CCGCTC	1 cut(s)	142
AccI	GTMKAC	1 cut(s)	937
AccII	CGCG	1 cut(s)	137
AccIII	TCCGGA	1 cut(s)	1864
AciI	CCGC	4 cut(s)	122, 140, 208, 690
AclWI	GGATC	2 cut(s)	137, 425
AcoI	YGGCCR	2 cut(s)	189, 451
AcuI	CTGAAG	1 cut(s)	1809
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	3 cut(s)	331, 374, 1122
AfiI	CCNNNNNNNGG	2 cut(s)	14, 485
AflIII	ACRYGT	1 cut(s)	27
AgsI	TTSAA	2 cut(s)	40, 448
AhdI	GACNNNNNGTC	1 cut(s)	690
AjiI	CACGTC	2 cut(s)	28, 1058
AluBI	AGCT	8 cut(s)	239, 598, 944, 1115, 1410, 1487, 1691, 1849
AluI	AGCT	8 cut(s)	239, 598, 944, 1115, 1410, 1487, 1691, 1849
Alw21I	GWGCWC	3 cut(s)	93, 177, 600
Alw26I	GTCTC	3 cut(s)	308, 618, 913
Alw44I	GTGCAC	1 cut(s)	89
AlwI	GGATC	2 cut(s)	137, 425
AlwNI	CAGNNNCTG	1 cut(s)	1694
Ama87I	CYCGRG	1 cut(s)	162
Aor13HI	TCCGGA	1 cut(s)	1864
AoxI	GGCC	4 cut(s)	189, 451, 728, 1648
ApaLI	GTGCAC	1 cut(s)	89
ApeKI	GCWGC	4 cut(s)	239, 779, 1042, 1244
Asp700I	GAANNNNTTC	1 cut(s)	829
AspLEI	GCGC	5 cut(s)	7, 111, 139, 259, 779
AspS9I	GGNCC	6 cut(s)	287, 692, 716, 1649, 1712, 1761
AsuC2I	CCSGG	1 cut(s)	480
AsuHPI	GGTGA	4 cut(s)	500, 857, 973, 1118
AsuII	TTCGAA	1 cut(s)	823
AvaI	CYCGRG	1 cut(s)	162
AvaII	GGWCC	5 cut(s)	287, 692, 716, 1712, 1761
BaeGI	GKGCMC	1 cut(s)	93
BalI	TGGCCA	2 cut(s)	191, 453
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	2 cut(s)	600, 1191
BauI	CACGAG	1 cut(s)	945
BbsI	GAAGAC	1 cut(s)	635
Bbv12I	GWGCWC	3 cut(s)	93, 177, 600
BbvCI	CCTCAGC	1 cut(s)	561
BbvI	GCAGC	4 cut(s)	226, 791, 1054, 1231
BccI	CCATC	6 cut(s)	262, 442, 543, 1046, 1700, 1726
BceAI	ACGGC	2 cut(s)	65, 152
BcnI	CCSGG	1 cut(s)	480
BcoDI	GTCTC	3 cut(s)	308, 618, 913
BfaI	CTAG	4 cut(s)	1259, 1308, 1659, 1918
BfmI	CTRYAG	1 cut(s)	355
BfoI	RGCGCY	1 cut(s)	8
BglII	AGATCT	1 cut(s)	1792
BisI	GCNGC	7 cut(s)	122, 140, 208, 240, 780, 1043, 1245
BlsI	GCNGC	7 cut(s)	123, 141, 209, 241, 781, 1044, 1246
Bme18I	GGWCC	5 cut(s)	287, 692, 716, 1712, 1761
BmeRI	GACNNNNNGTC	1 cut(s)	690
BmeT110I	CYCGRG	1 cut(s)	162
BmgBI	CACGTC	2 cut(s)	28, 1058
BmgT120I	GGNCC	6 cut(s)	287, 692, 716, 1649, 1712, 1761
BmiI	GGNNCC	5 cut(s)	6, 19, 555, 1190, 1609
BmsI	GCATC	3 cut(s)	518, 1152, 1439
BpiI	GAAGAC	1 cut(s)	635
Bpu10I	CCTNAGC	1 cut(s)	561
Bpu14I	TTCGAA	1 cut(s)	823
BpuEI	CTTGAG	1 cut(s)	1407
BpuMI	CCSGG	1 cut(s)	480
Bsa29I	ATCGAT	2 cut(s)	148, 201
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	1 cut(s)	618
BsaJI	CCNNGG	8 cut(s)	8, 156, 765, 783, 834, 877, 1184, 1196
BsaWI	WCCGGW	2 cut(s)	1273, 1864
Bsc4I	CCNNNNNNNGG	2 cut(s)	14, 485
Bse1I	ACTGG	1 cut(s)	1328
Bse3DI	GCAATG	1 cut(s)	1323
BseAI	TCCGGA	1 cut(s)	1864
BseCI	ATCGAT	2 cut(s)	148, 201
BseDI	CCNNGG	8 cut(s)	8, 156, 765, 783, 834, 877, 1184, 1196
BseGI	GGATG	7 cut(s)	554, 793, 899, 1057, 1333, 1471, 1882
BseLI	CCNNNNNNNGG	2 cut(s)	14, 485
BseMI	GCAATG	1 cut(s)	1323
BseMII	CTCAG	3 cut(s)	575, 749, 1743
BseNI	ACTGG	1 cut(s)	1328
BseRI	GAGGAG	1 cut(s)	1406
BseSI	GKGCMC	1 cut(s)	93
BseXI	GCAGC	4 cut(s)	226, 791, 1054, 1231
BseYI	CCCAGC	2 cut(s)	607, 1247
BsgI	GTGCAG	1 cut(s)	609
Bsh1236I	CGCG	1 cut(s)	137
Bsh1285I	CGRYCG	1 cut(s)	148
BshFI	GGCC	4 cut(s)	191, 453, 730, 1650
BshNI	GGYRCC	1 cut(s)	4
BshVI	ATCGAT	2 cut(s)	148, 201
BsiEI	CGRYCG	1 cut(s)	148
BsiHKAI	GWGCWC	3 cut(s)	93, 177, 600
BsiHKCI	CYCGRG	1 cut(s)	162
BsiSI	CCGG	6 cut(s)	21, 33, 285, 479, 1274, 1865
BslFI	GGGAC	1 cut(s)	697
BslI	CCNNNNNNNGG	2 cut(s)	14, 485
BsmAI	GTCTC	3 cut(s)	308, 618, 913
BsmFI	GGGAC	1 cut(s)	697
BsmI	GAATGC	1 cut(s)	1236
BsnI	GGCC	4 cut(s)	191, 453, 730, 1650
Bso31I	GGTCTC	1 cut(s)	618
BsoBI	CYCGRG	1 cut(s)	162
Bsp119I	TTCGAA	1 cut(s)	823
Bsp1286I	GDGCHC	4 cut(s)	93, 177, 600, 1191
Bsp13I	TCCGGA	1 cut(s)	1864
Bsp143I	GATC	5 cut(s)	129, 145, 430, 1792, 1819
Bsp19I	CCATGG	1 cut(s)	765
BspACI	CCGC	4 cut(s)	122, 140, 208, 690
BspANI	GGCC	4 cut(s)	191, 453, 730, 1650
BspCNI	CTCAG	3 cut(s)	574, 748, 1744
BspDI	ATCGAT	2 cut(s)	148, 201
BspEI	TCCGGA	1 cut(s)	1864
BspFNI	CGCG	1 cut(s)	137
BspHI	TCATGA	2 cut(s)	624, 1089
BspLI	GGNNCC	5 cut(s)	6, 19, 555, 1190, 1609
BspPI	GGATC	2 cut(s)	137, 425
BspQI	GCTCTTC	1 cut(s)	588
BspT104I	TTCGAA	1 cut(s)	823
BspT107I	GGYRCC	1 cut(s)	4
BspTNI	GGTCTC	1 cut(s)	618
BsrBI	CCGCTC	1 cut(s)	142
BsrDI	GCAATG	1 cut(s)	1323
BsrI	ACTGG	1 cut(s)	1328
BssECI	CCNNGG	8 cut(s)	8, 156, 765, 783, 834, 877, 1184, 1196
BssMI	GATC	5 cut(s)	129, 145, 430, 1792, 1819
BssNAI	GTATAC	1 cut(s)	938
BssNI	GRCGYC	1 cut(s)	5
BssSI	CACGAG	1 cut(s)	945
BssT1I	CCWWGG	3 cut(s)	765, 877, 1196
Bst1107I	GTATAC	1 cut(s)	938
Bst2BI	CACGAG	1 cut(s)	945
Bst4CI	ACNGT	6 cut(s)	319, 913, 1513, 1561, 1599, 1784
Bst6I	CTCTTC	2 cut(s)	306, 588
BstACI	GRCGYC	1 cut(s)	5
BstBI	TTCGAA	1 cut(s)	823
BstC8I	GCNNGC	1 cut(s)	282
BstDEI	CTNAG	5 cut(s)	561, 735, 1736, 1752, 1796
BstDSI	CCRYGG	1 cut(s)	765
BstF5I	GGATG	7 cut(s)	554, 793, 899, 1057, 1333, 1471, 1882
BstFNI	CGCG	1 cut(s)	137
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	5 cut(s)	7, 111, 139, 259, 779
BstKTI	GATC	5 cut(s)	132, 148, 433, 1795, 1822
BstMAI	GTCTC	3 cut(s)	308, 618, 913
BstMBI	GATC	5 cut(s)	129, 145, 430, 1792, 1819
BstMCI	CGRYCG	1 cut(s)	148
BstMWI	GCNNNNNNNGC	6 cut(s)	604, 752, 776, 1313, 1522, 1855
BstNSI	RCATGY	1 cut(s)	109
BstSFI	CTRYAG	1 cut(s)	355
BstSLI	GKGCMC	1 cut(s)	93
BstUI	CGCG	1 cut(s)	137
BstV1I	GCAGC	4 cut(s)	226, 791, 1054, 1231
BstV2I	GAAGAC	1 cut(s)	635
BstX2I	RGATCY	1 cut(s)	1792
BstXI	CCANNNNNNTGG	1 cut(s)	1247
BstYI	RGATCY	1 cut(s)	1792
BstZ17I	GTATAC	1 cut(s)	938
Bsu15I	ATCGAT	2 cut(s)	148, 201
BsuRI	GGCC	4 cut(s)	191, 453, 730, 1650
BsuTUI	ATCGAT	2 cut(s)	148, 201
BtgI	CCRYGG	1 cut(s)	765
BtgZI	GCGATG	1 cut(s)	61
BtrI	CACGTC	2 cut(s)	28, 1058
BtsCI	GGATG	7 cut(s)	554, 793, 899, 1057, 1333, 1471, 1882
BtsIMutI	CAGTG	1 cut(s)	918
Cac8I	GCNNGC	1 cut(s)	282
CaiI	CAGNNNCTG	1 cut(s)	1694
CciI	TCATGA	2 cut(s)	624, 1089
CfoI	GCGC	5 cut(s)	7, 111, 139, 259, 779
Cfr13I	GGNCC	6 cut(s)	287, 692, 716, 1649, 1712, 1761
ClaI	ATCGAT	2 cut(s)	148, 201
CseI	GACGC	2 cut(s)	143, 666
Csp6I	GTAC	3 cut(s)	330, 373, 1121
CviAII	CATG	9 cut(s)	106, 501, 617, 625, 766, 1046, 1083, 1090, 1241
CviQI	GTAC	3 cut(s)	330, 373, 1121
DdeI	CTNAG	5 cut(s)	561, 735, 1736, 1752, 1796
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	5 cut(s)	131, 147, 432, 1794, 1821
DpnII	GATC	5 cut(s)	129, 145, 430, 1792, 1819
DraI	TTTAAA	1 cut(s)	1449
DriI	GACNNNNNGTC	1 cut(s)	690
EaeI	YGGCCR	2 cut(s)	189, 451
Eam1104I	CTCTTC	2 cut(s)	306, 588
Eam1105I	GACNNNNNGTC	1 cut(s)	690
EarI	CTCTTC	2 cut(s)	306, 588
Ecl136II	GAGCTC	1 cut(s)	598
Eco130I	CCWWGG	3 cut(s)	765, 877, 1196
Eco24I	GRGCYC	2 cut(s)	600, 1191
Eco31I	GGTCTC	1 cut(s)	618
Eco32I	GATATC	1 cut(s)	199
Eco47I	GGWCC	5 cut(s)	287, 692, 716, 1712, 1761
Eco53kI	GAGCTC	1 cut(s)	598
Eco57I	CTGAAG	1 cut(s)	1809
Eco88I	CYCGRG	1 cut(s)	162
EcoICRI	GAGCTC	1 cut(s)	598
EcoO109I	RGGNCCY	2 cut(s)	716, 1649
EcoRV	GATATC	1 cut(s)	199
EcoT14I	CCWWGG	3 cut(s)	765, 877, 1196
EcoT38I	GRGCYC	2 cut(s)	600, 1191
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	3 cut(s)	765, 877, 1196
FaeI	CATG	9 cut(s)	109, 504, 620, 628, 769, 1049, 1086, 1093, 1244
FalI	AAGNNNNNCTT	2 cut(s)	1218, 1250
FaqI	GGGAC	1 cut(s)	697
FatI	CATG	9 cut(s)	105, 500, 616, 624, 765, 1045, 1082, 1089, 1240
FauNDI	CATATG	1 cut(s)	1727
FblI	GTMKAC	1 cut(s)	937
Fnu4HI	GCNGC	7 cut(s)	122, 140, 208, 240, 780, 1043, 1245
FokI	GGATG	7 cut(s)	561, 800, 886, 1064, 1320, 1478, 1889
FriOI	GRGCYC	2 cut(s)	600, 1191
Fsp4HI	GCNGC	7 cut(s)	122, 140, 208, 240, 780, 1043, 1245
FspBI	CTAG	4 cut(s)	1259, 1308, 1659, 1918
GlaI	GCGC	5 cut(s)	6, 110, 138, 258, 778
GluI	GCNGC	7 cut(s)	122, 140, 208, 240, 780, 1043, 1245
GsaI	CCCAGC	2 cut(s)	611, 1251
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	4 cut(s)	191, 453, 730, 1650
HapII	CCGG	6 cut(s)	21, 33, 285, 479, 1274, 1865
HgaI	GACGC	2 cut(s)	143, 666
HhaI	GCGC	5 cut(s)	7, 111, 139, 259, 779
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	9 cut(s)	109, 504, 620, 628, 769, 1049, 1086, 1093, 1244
Hin6I	GCGC	5 cut(s)	5, 109, 137, 257, 777
HinP1I	GCGC	5 cut(s)	5, 109, 137, 257, 777
HpaII	CCGG	6 cut(s)	21, 33, 285, 479, 1274, 1865
HphI	GGTGA	4 cut(s)	500, 857, 973, 1118
Hpy166II	GTNNAC	6 cut(s)	91, 467, 541, 938, 1542, 1715
Hpy188I	TCNGA	7 cut(s)	157, 430, 835, 1107, 1465, 1705, 1789
Hpy188III	TCNNGA	9 cut(s)	546, 625, 695, 714, 1010, 1090, 1424, 1751, 1865
Hpy8I	GTNNAC	6 cut(s)	91, 467, 541, 938, 1542, 1715
Hpy99I	CGWCG	4 cut(s)	29, 137, 173, 682
HpyAV	CCTTC	7 cut(s)	56, 209, 741, 913, 988, 1102, 1774
HpyCH4III	ACNGT	6 cut(s)	319, 913, 1513, 1561, 1599, 1784
HpyCH4IV	ACGT	3 cut(s)	27, 177, 1057
HpyCH4V	TGCA	6 cut(s)	91, 590, 1316, 1516, 1631, 1673
HpyF10VI	GCNNNNNNNGC	6 cut(s)	604, 752, 776, 1313, 1522, 1855
HpyF3I	CTNAG	5 cut(s)	561, 735, 1736, 1752, 1796
HpySE526I	ACGT	3 cut(s)	27, 177, 1057
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	9 cut(s)	109, 504, 620, 628, 769, 1049, 1086, 1093, 1244
HspAI	GCGC	5 cut(s)	5, 109, 137, 257, 777
KasI	GGCGCC	1 cut(s)	4
Kpn2I	TCCGGA	1 cut(s)	1864
Kzo9I	GATC	5 cut(s)	129, 145, 430, 1792, 1819
LguI	GCTCTTC	1 cut(s)	588
LmnI	GCTCC	4 cut(s)	277, 1194, 1484, 1742
Lsp1109I	GCAGC	4 cut(s)	226, 791, 1054, 1231
LweI	GCATC	3 cut(s)	518, 1152, 1439
MaeI	CTAG	4 cut(s)	1259, 1308, 1659, 1918
MaeII	ACGT	3 cut(s)	27, 177, 1057
MaeIII	GTNAC	1 cut(s)	845
MalI	GATC	5 cut(s)	131, 147, 432, 1794, 1821
MbiI	CCGCTC	1 cut(s)	142
MboI	GATC	5 cut(s)	129, 145, 430, 1792, 1819
MboII	GAAGA	6 cut(s)	323, 605, 640, 981, 1138, 1802
MflI	RGATCY	1 cut(s)	1792
MhlI	GDGCHC	4 cut(s)	93, 177, 600, 1191
MlsI	TGGCCA	2 cut(s)	191, 453
MluCI	AATT	7 cut(s)	721, 985, 1216, 1263, 1269, 1386, 1756
MluNI	TGGCCA	2 cut(s)	191, 453
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	5 cut(s)	66, 192, 229, 419, 536
MmeI	TCCRAC	1 cut(s)	243
Mox20I	TGGCCA	2 cut(s)	191, 453
MroI	TCCGGA	1 cut(s)	1864
MroXI	GAANNNNTTC	1 cut(s)	829
MscI	TGGCCA	2 cut(s)	191, 453
MseI	TTAA	7 cut(s)	336, 582, 972, 1079, 1385, 1448, 1613
MslI	CAYNNNNRTG	4 cut(s)	637, 1023, 1050, 1726
Msp20I	TGGCCA	2 cut(s)	191, 453
MspI	CCGG	6 cut(s)	21, 33, 285, 479, 1274, 1865
Mva1269I	GAATGC	1 cut(s)	1236
MvnI	CGCG	1 cut(s)	137
MwoI	GCNNNNNNNGC	6 cut(s)	604, 752, 776, 1313, 1522, 1855
NarI	GGCGCC	1 cut(s)	5
NciI	CCSGG	1 cut(s)	480
NcoI	CCATGG	1 cut(s)	765
NdeI	CATATG	1 cut(s)	1727
NdeII	GATC	5 cut(s)	129, 145, 430, 1792, 1819
NlaIII	CATG	9 cut(s)	109, 504, 620, 628, 769, 1049, 1086, 1093, 1244
NlaIV	GGNNCC	5 cut(s)	6, 19, 555, 1190, 1609
NmeAIII	GCCGAG	1 cut(s)	33
NmuCI	GTSAC	1 cut(s)	845
NspI	RCATGY	1 cut(s)	109
NspV	TTCGAA	1 cut(s)	823
PaeR7I	CTCGAG	1 cut(s)	162
PagI	TCATGA	2 cut(s)	624, 1089
PciSI	GCTCTTC	1 cut(s)	588
PcsI	WCGNNNNNNNCGW	2 cut(s)	21, 141
PctI	GAATGC	1 cut(s)	1236
PdmI	GAANNNNTTC	1 cut(s)	829
PfeI	GAWTC	5 cut(s)	97, 150, 416, 1180, 1574
PfoI	TCCNGGA	2 cut(s)	223, 805
PkrI	GCNGC	7 cut(s)	123, 141, 209, 241, 781, 1044, 1246
Ple19I	CGATCG	1 cut(s)	148
PleI	GAGTC	5 cut(s)	66, 191, 228, 419, 536
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	5 cut(s)	66, 191, 228, 419, 536
PpuMI	RGGWCCY	1 cut(s)	716
PsiI	TTATAA	2 cut(s)	665, 1548
Psp124BI	GAGCTC	1 cut(s)	600
Psp5II	RGGWCCY	1 cut(s)	716
PspFI	CCCAGC	2 cut(s)	607, 1247
PspN4I	GGNNCC	5 cut(s)	6, 19, 555, 1190, 1609
PspPI	GGNCC	6 cut(s)	287, 692, 716, 1649, 1712, 1761
PspPPI	RGGWCCY	1 cut(s)	716
PspXI	VCTCGAGB	1 cut(s)	162
PstNI	CAGNNNCTG	1 cut(s)	1694
PsuI	RGATCY	1 cut(s)	1792
PvuI	CGATCG	1 cut(s)	148
RsaI	GTAC	3 cut(s)	331, 374, 1122
RsaNI	GTAC	3 cut(s)	330, 373, 1121
RseI	CAYNNNNRTG	4 cut(s)	637, 1023, 1050, 1726
SacI	GAGCTC	1 cut(s)	600
SapI	GCTCTTC	1 cut(s)	588
SaqAI	TTAA	7 cut(s)	336, 582, 972, 1079, 1385, 1448, 1613
SatI	GCNGC	7 cut(s)	122, 140, 208, 240, 780, 1043, 1245
Sau3AI	GATC	5 cut(s)	129, 145, 430, 1792, 1819
Sau96I	GGNCC	6 cut(s)	287, 692, 716, 1649, 1712, 1761
SchI	GAGTC	5 cut(s)	66, 192, 229, 419, 536
SduI	GDGCHC	4 cut(s)	93, 177, 600, 1191
SfaNI	GCATC	3 cut(s)	518, 1152, 1439
SfcI	CTRYAG	1 cut(s)	355
SfoI	GGCGCC	1 cut(s)	6
Sfr274I	CTCGAG	1 cut(s)	162
SfuI	TTCGAA	1 cut(s)	823
SinI	GGWCC	5 cut(s)	287, 692, 716, 1712, 1761
SlaI	CTCGAG	1 cut(s)	162
SmiMI	CAYNNNNRTG	4 cut(s)	637, 1023, 1050, 1726
SmlI	CTYRAG	2 cut(s)	162, 1422
SmoI	CTYRAG	2 cut(s)	162, 1422
Sse9I	AATT	7 cut(s)	721, 985, 1216, 1263, 1269, 1386, 1756
SsiI	CCGC	4 cut(s)	122, 140, 208, 690
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	3 cut(s)	391, 828, 1642
SspMI	CTAG	4 cut(s)	1259, 1308, 1659, 1918
SstI	GAGCTC	1 cut(s)	600
StyI	CCWWGG	3 cut(s)	765, 877, 1196
TaaI	ACNGT	6 cut(s)	319, 913, 1513, 1561, 1599, 1784
TaiI	ACGT	3 cut(s)	30, 180, 1060
TasI	AATT	7 cut(s)	721, 985, 1216, 1263, 1269, 1386, 1756
TauI	GCSGC	3 cut(s)	124, 142, 210
TfiI	GAWTC	5 cut(s)	97, 150, 416, 1180, 1574
Tru1I	TTAA	7 cut(s)	336, 582, 972, 1079, 1385, 1448, 1613
Tru9I	TTAA	7 cut(s)	336, 582, 972, 1079, 1385, 1448, 1613
TscAI	CASTG	1 cut(s)	918
TseFI	GTSAC	1 cut(s)	845
TseI	GCWGC	4 cut(s)	239, 779, 1042, 1244
Tsp45I	GTSAC	1 cut(s)	845
TspDTI	ATGAA	8 cut(s)	103, 613, 641, 1078, 1334, 1348, 1482, 1851
TspGWI	ACGGA	1 cut(s)	84
TspRI	CASTG	1 cut(s)	918
VneI	GTGCAC	1 cut(s)	89
VpaK11BI	GGWCC	5 cut(s)	287, 692, 716, 1712, 1761
XceI	RCATGY	1 cut(s)	109
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1398
XhoI	CTCGAG	1 cut(s)	162
XmiI	GTMKAC	1 cut(s)	937
XmnI	GAANNNNTTC	1 cut(s)	829
XspI	CTAG	4 cut(s)	1259, 1308, 1659, 1918

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.