Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0005119

Physical Location & Seq

Genomic Coordinates Forward (+)

47688656 .. 47696105

Gene Structure 7450 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG307300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2625 bp

ATGGCGCCGAGGCTCGGCTCCGGCGATGTGTCCGGCTTCAAGTTCCTTCTCTTTCTCGTCGCGATTTACGGCCTCATCGCCGTCCTGGTGCACTCGATTCTCCACATGCGCTTCATTACGCCGCTTGGGATCGACGCGCCGCTCGATCGATTCTCCGAGGCTCGAGCCGTCGAGCACGTTCGAGTCCTGGCCAAAGATATCGATAGCCGCCAGGAAGGGAGTCCTGGATTGAGAGAAGCTGCTCGATATATTACAGCGCAGTTGGAGATGGTAAAGGAGCGAGCTGGACCTAACTTTAGAGTTGAGATAGAAGAGACTGTTGTGAATGGCACATTTAATATGCTGTTTTTAGGCTATAGCATATCTCTGGGGTACAGAAACCACACAAATATTGTGATGAGAATATCATCAGTAGATTCACAAGACTCTGATCCGTCAGTATTGTTGAATGGCCATTTTGATAGTCCACTTGGTTCTCCGGGTGCTGGTGATTGTGGGTCATGTGTAGCATCAATGCTGGAAATAGCAAGACTTATTGTGGACTCTGGATGGGTTCCCCCTCAGCCTGTTATTTTTCTTTTTAATGGTGCAGAAGAGCTCTTTTTGCTGGGGTCTCATGGCTTCATGAAGACACATAAATGGCGTGAAACTATTGGGGCTTTTATAAATGTGGAAGCGTCGGGGACAGGCGGTCCTGATTTAGTTTGCCAGTCAGGACCTAGTTCCTGGCCTTCTCAGGTCTATGCTCAATCAGCAGTATATCCCATGGCACATAGCGCGGCCCAGGATGTTTTTCCTGTTGTTCCTGGAGATACAGATTTTCGAATATTTTCCGAGGACTATGGTGACATTCCTGGCTTGGATATTATCTTTCTCCTTGGTGGTTATTTTTATCATACATCCTTCGATACAGTGGAGAGACTATTACCTGGAAGTATACAAGCTCGTGGAGAAAATCTGTTTAGCATACTTAAAGCCTTCACCAATTCTTCTACGCTACAAAATACTCTCGAAAGACATTCTAATGTATCAACTGCCAAGCAGCATGAGGATGGACGTGCTGTTTTCTTTGATTATTTAACATGGTTCATGATATACTATTCTCGGAAGGTAGCTATGGTACTTCACCCTATTCCTATTGGCATCTTCCTGGCTATGCCATTTTTCTCACAAAAGCAGAATCCTGGGCTCCTACCTTGGTTTGCTACTTTCAGCAATTTTGTAAAAGGAATGCTTTTCCATGCTGCTGGGGTTTTTCTAGCAATTGTAATTCCGGTTATCTTTTCCATCGTGAGATTGTTGTTTGCTAGTCGTGCAATGAACTGGTTTGCTCATCCATATTTGGCTTATTTGATGTTCATACCTTGCTCTCTTGTTGGTCTGTTAATTCCAAGATTTGTTTGGAGTAGCTTTCCCCTCACTCAAGAGGCATCAGTTGTCAAGTCTTTAAAAGAGGCTTTATCGGATGAAGCAAGGTTCTGGGGAGCTTTTGGATTATACGCTACAATAACTGTGGCTTACCTGTATGCTGGGTTGAGCGGAGGCTTCTTGACTTTTTCACTGTCCGTTTCTATGCTTCTTGGATGGATTTCATATTGCTTAGCAGTCAAATTATTTGGTCGCCAATCACTCAGGTCAACGTTAGTTTATATGTTACCTATACTTCCATGCCTTGCGTACTCTGTGTATTTTGGTGCATTTCTTGTCCAGTTTTTGGTTGAAAAGATGGGTATGATGGGTGCTTTGCCACCTCCATATGGTTATTTCGTTCCTGACATTGTGGTGGCCGCAGTAATTGGAGTTGTGACCAGTTGGTCTGTAGGCCCTCTGATACCTATTTGCGGTCACTGGTTAGCCAGGTCATCCATTTTGCAAGTCTTGTTGCATCTTAGTGTGCTAGGCTTGGCTCTGTCATCTCAGTTCTTTCCATATAGCACGGGTGCACCTAAGAGAGTTGTTTTCCAGCATACTTTTCTTACTGCAGATGCAAATCATGTTGTGGAGTCCAGCTATGATTTTTCTGTTGTGGATTCCAATTCGTTACTTTTTCTTTTCAAACATGCACCCGAGGTGGCAAAGGAATTGCACATTAGTTCAGAGTTGTCTTTTGAAACTGCAAAGTCATCTCACCGAGAGACTTGGATGGGACTTTTCCCTGTTTCTTGTTTGTTCTCAAGAAGCTTGAAGTTCCCTGCAAGAAGTGATGGCATTTTAAAGCAATACGGCGGGCAGTTCCCTCATCTATCCACTTATAAGCCACATACAGCATTTGGCGAGGAATCTCGGAGAATATACTTGGAACTATCTTTAGGTTCCTTAGAGGAGGTTTGGGTTGCAGTCCTCAATATTACAGGCCCTTTATCTAGTTGGTCATTTGCAGACAATACACTTCCAGCTACTGAAACATCTGATGGAGGTCCACCATCATACATATGCCGACTTAGTGGAGCTAGTCCTGAGAATTGGACCTTCTGGTTAGAGGCTAACAGTTCTGAAGATCTAAGGGTAGAAGTTGCTGTCGTAGATCAATATATGGTTGATGAAGCAAAGAAGCTGAAAGGGCTTTTTCCGGAGTGGGTGGATGTAGTTGCTTATTCTGGCTTTTTGTCGAGTTATATTTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001541 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0007275 GO:0007548 GO:0008150 GO:0008406 GO:0008585 GO:0012505 GO:0022414 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045137 GO:0046545 GO:0046660 GO:0048513 GO:0048608 GO:0048731 GO:0048856 GO:0061458

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M28

Protein Analysis

874

Amino Acids

96.62

Weight (kDa)

5.86

Isoelectric Point (pI)

37.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M28	PF04389	130 - 321	5.7e-44	Peptidase family M28
ERMP1_C	PF22248	648 - 872	2.1e-30	Endoplasmic reticulum metallopeptidase 1, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005119)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67420 AT1G67420 AT1G67420 AT1G67420 AT1G67420 AT1G67420
fragaria_vesca	FvH4_4g23910 FvH4_4g23910 FvH4_4g23910 FvH4_4g23910 FvH4_4g23910 FvH4_4g23910
malus_domestica	MD13G1117700.v1.1 MD16G1117900.v1.1
prunus_persica	Prupe.1G227300_v2.0.a1 Prupe.1G227300_v2.0.a1 Prupe.1G227300_v2.0.a1
pyrus_communis	pycom13g10180 pycom16g10100
rosa_chinensis	RchiOBHm_Chr4g0430551
rosa_laevigata	RLG00000006970
rosa_multiflora	Rmu_sc0011782.1_g000005
rosa_roxburghii	Rroxscaffold_5G00372320
rosa_rugosa	Rorug04G0244100 Rorug04G0244200
rosa_samantha	Rh4AG300200 Rh4BG307300 Rh4CG324000 Rh4DG304600
rosa_wichuraiana	Rw4G026050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	665, 2253
AasI	GACNNNNNNGTC	1 cut(s)	1813
AccB1I	GGYRCC	1 cut(s)	4
AccB7I	CCANNNNNTGG	1 cut(s)	1714
AccBSI	CCGCTC	2 cut(s)	142, 1539
AccI	GTMKAC	1 cut(s)	937
AccII	CGCG	3 cut(s)	62, 137, 779
AccIII	TCCGGA	1 cut(s)	2569
AciI	CCGC	9 cut(s)	122, 140, 208, 690, 779, 1539, 1788, 1842, 2226
AclI	AACGTT	1 cut(s)	1640
AclWI	GGATC	2 cut(s)	137, 425
AcoI	YGGCCR	3 cut(s)	189, 451, 1785
AcuI	CTGAAG	1 cut(s)	2514
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	3 cut(s)	374, 1122, 1679
AfiI	CCNNNNNNNGG	5 cut(s)	14, 485, 1714, 1757, 1841
AgsI	TTSAA	6 cut(s)	40, 448, 1721, 2056, 2111, 2185
AhdI	GACNNNNNGTC	1 cut(s)	690
AjiI	CACGTC	1 cut(s)	1058
Alw21I	GWGCWC	4 cut(s)	93, 177, 600, 1945
Alw26I	GTCTC	4 cut(s)	308, 618, 913, 2129
Alw44I	GTGCAC	2 cut(s)	89, 1941
AlwI	GGATC	2 cut(s)	137, 425
AlwNI	CAGNNNCTG	1 cut(s)	2399
Ama87I	CYCGRG	2 cut(s)	162, 2066
Aor13HI	TCCGGA	1 cut(s)	2569
AoxI	GGCC	8 cut(s)	70, 189, 451, 728, 780, 1785, 1822, 2353
ApaLI	GTGCAC	2 cut(s)	89, 1941
ApeKI	GCWGC	3 cut(s)	239, 1042, 1244
Asp700I	GAANNNNTTC	1 cut(s)	829
AspLEI	GCGC	5 cut(s)	7, 111, 139, 259, 779
AspS9I	GGNCC	8 cut(s)	287, 692, 716, 781, 1823, 2354, 2417, 2466
AsuC2I	CCSGG	1 cut(s)	480
AsuHPI	GGTGA	5 cut(s)	500, 857, 973, 1118, 2120
AsuII	TTCGAA	1 cut(s)	823
AvaI	CYCGRG	2 cut(s)	162, 2066
AvaII	GGWCC	5 cut(s)	287, 692, 716, 2417, 2466
BaeGI	GKGCMC	2 cut(s)	93, 1945
BalI	TGGCCA	2 cut(s)	191, 453
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	2 cut(s)	600, 1191
BauI	CACGAG	1 cut(s)	945
BbsI	GAAGAC	1 cut(s)	635
Bbv12I	GWGCWC	4 cut(s)	93, 177, 600, 1945
BbvCI	CCTCAGC	1 cut(s)	561
BbvI	GCAGC	3 cut(s)	226, 1054, 1231
BceAI	ACGGC	4 cut(s)	65, 85, 152, 2239
BcnI	CCSGG	1 cut(s)	480
BcoDI	GTCTC	4 cut(s)	308, 618, 913, 2129
BfaI	CTAG	7 cut(s)	720, 1259, 1308, 1898, 2364, 2451, 2623
BfmI	CTRYAG	3 cut(s)	355, 1818, 1980
BfoI	RGCGCY	1 cut(s)	8
BglII	AGATCT	1 cut(s)	2497
BisI	GCNGC	8 cut(s)	122, 140, 208, 240, 780, 1043, 1245, 1788
BlpI	GCTNAGC	1 cut(s)	1600
BlsI	GCNGC	8 cut(s)	123, 141, 209, 241, 781, 1044, 1246, 1789
Bme18I	GGWCC	5 cut(s)	287, 692, 716, 2417, 2466
BmeRI	GACNNNNNGTC	1 cut(s)	690
BmeT110I	CYCGRG	2 cut(s)	162, 2066
BmgBI	CACGTC	1 cut(s)	1058
BmgT120I	GGNCC	8 cut(s)	287, 692, 716, 781, 1823, 2354, 2417, 2466
BmiI	GGNNCC	5 cut(s)	6, 19, 555, 1190, 2314
BmsI	GCATC	5 cut(s)	518, 1152, 1439, 1894, 1975
BpiI	GAAGAC	1 cut(s)	635
BpmI	CTGGAG	1 cut(s)	828
Bpu10I	CCTNAGC	1 cut(s)	561
Bpu1102I	GCTNAGC	1 cut(s)	1600
Bpu14I	TTCGAA	1 cut(s)	823
BpuEI	CTTGAG	2 cut(s)	1407, 2158
BpuMI	CCSGG	1 cut(s)	480
Bsa29I	ATCGAT	2 cut(s)	148, 201
BsaBI	GATNNNNATC	1 cut(s)	1989
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	1 cut(s)	618
BsaJI	CCNNGG	9 cut(s)	8, 156, 765, 783, 834, 877, 1184, 1196, 2067
BsaWI	WCCGGW	2 cut(s)	1273, 2569
Bsc4I	CCNNNNNNNGG	5 cut(s)	14, 485, 1714, 1757, 1841
Bse1I	ACTGG	5 cut(s)	709, 1328, 1708, 1809, 1853
Bse3DI	GCAATG	1 cut(s)	1323
Bse8I	GATNNNNATC	1 cut(s)	1989
BseAI	TCCGGA	1 cut(s)	2569
BseCI	ATCGAT	2 cut(s)	148, 201
BseDI	CCNNGG	9 cut(s)	8, 156, 765, 783, 834, 877, 1184, 1196, 2067
BseJI	GATNNNNATC	1 cut(s)	1989
BseLI	CCNNNNNNNGG	5 cut(s)	14, 485, 1714, 1757, 1841
BseMI	GCAATG	1 cut(s)	1323
BseMII	CTCAG	5 cut(s)	575, 749, 1645, 1931, 2448
BseNI	ACTGG	5 cut(s)	709, 1328, 1708, 1809, 1853
BseRI	GAGGAG	1 cut(s)	2336
BseSI	GKGCMC	2 cut(s)	93, 1945
BseXI	GCAGC	3 cut(s)	226, 1054, 1231
BseYI	CCCAGC	3 cut(s)	607, 1247, 1529
BsgI	GTGCAG	1 cut(s)	609
Bsh1236I	CGCG	3 cut(s)	62, 137, 779
Bsh1285I	CGRYCG	1 cut(s)	148
BshFI	GGCC	8 cut(s)	72, 191, 453, 730, 782, 1787, 1824, 2355
BshNI	GGYRCC	1 cut(s)	4
BshVI	ATCGAT	2 cut(s)	148, 201
BsiEI	CGRYCG	1 cut(s)	148
BsiHKAI	GWGCWC	4 cut(s)	93, 177, 600, 1945
BsiHKCI	CYCGRG	2 cut(s)	162, 2066
BsiSI	CCGG	5 cut(s)	21, 33, 479, 1274, 2570
BslFI	GGGAC	2 cut(s)	697, 2160
BslI	CCNNNNNNNGG	5 cut(s)	14, 485, 1714, 1757, 1841
BsmAI	GTCTC	4 cut(s)	308, 618, 913, 2129
BsmFI	GGGAC	2 cut(s)	697, 2160
BsmI	GAATGC	1 cut(s)	1236
BsnI	GGCC	8 cut(s)	72, 191, 453, 730, 782, 1787, 1824, 2355
Bso31I	GGTCTC	1 cut(s)	618
BsoBI	CYCGRG	2 cut(s)	162, 2066
Bsp119I	TTCGAA	1 cut(s)	823
Bsp1286I	GDGCHC	5 cut(s)	93, 177, 600, 1191, 1945
Bsp13I	TCCGGA	1 cut(s)	2569
Bsp143I	GATC	5 cut(s)	129, 145, 430, 2497, 2524
Bsp1720I	GCTNAGC	1 cut(s)	1600
Bsp19I	CCATGG	1 cut(s)	765
Bsp68I	TCGCGA	1 cut(s)	62
BspACI	CCGC	9 cut(s)	122, 140, 208, 690, 779, 1539, 1788, 1842, 2226
BspANI	GGCC	8 cut(s)	72, 191, 453, 730, 782, 1787, 1824, 2355
BspCNI	CTCAG	5 cut(s)	574, 748, 1644, 1930, 2449
BspDI	ATCGAT	2 cut(s)	148, 201
BspEI	TCCGGA	1 cut(s)	2569
BspFNI	CGCG	3 cut(s)	62, 137, 779
BspHI	TCATGA	2 cut(s)	624, 1089
BspLI	GGNNCC	5 cut(s)	6, 19, 555, 1190, 2314
BspMAI	CTGCAG	1 cut(s)	1984
BspPI	GGATC	2 cut(s)	137, 425
BspQI	GCTCTTC	1 cut(s)	588
BspT104I	TTCGAA	1 cut(s)	823
BspT107I	GGYRCC	1 cut(s)	4
BspTNI	GGTCTC	1 cut(s)	618
BsrBI	CCGCTC	2 cut(s)	142, 1539
BsrDI	GCAATG	1 cut(s)	1323
BsrI	ACTGG	5 cut(s)	709, 1328, 1708, 1809, 1853
BssECI	CCNNGG	9 cut(s)	8, 156, 765, 783, 834, 877, 1184, 1196, 2067
BssMI	GATC	5 cut(s)	129, 145, 430, 2497, 2524
BssNAI	GTATAC	1 cut(s)	938
BssNI	GRCGYC	1 cut(s)	5
BssSI	CACGAG	1 cut(s)	945
BssT1I	CCWWGG	3 cut(s)	765, 877, 1196
Bst1107I	GTATAC	1 cut(s)	938
Bst2BI	CACGAG	1 cut(s)	945
Bst4CI	ACNGT	5 cut(s)	319, 913, 1513, 1563, 2489
Bst6I	CTCTTC	2 cut(s)	306, 588
BstACI	GRCGYC	1 cut(s)	5
BstBI	TTCGAA	1 cut(s)	823
BstC8I	GCNNGC	2 cut(s)	282, 2228
BstDSI	CCRYGG	1 cut(s)	765
BstFNI	CGCG	3 cut(s)	62, 137, 779
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	5 cut(s)	7, 111, 139, 259, 779
BstKTI	GATC	5 cut(s)	132, 148, 433, 2500, 2527
BstMAI	GTCTC	4 cut(s)	308, 618, 913, 2129
BstMBI	GATC	5 cut(s)	129, 145, 430, 2497, 2524
BstMCI	CGRYCG	1 cut(s)	148
BstMWI	GCNNNNNNNGC	5 cut(s)	604, 752, 776, 1313, 2560
BstNSI	RCATGY	2 cut(s)	109, 2063
BstSFI	CTRYAG	3 cut(s)	355, 1818, 1980
BstSLI	GKGCMC	2 cut(s)	93, 1945
BstUI	CGCG	3 cut(s)	62, 137, 779
BstV1I	GCAGC	3 cut(s)	226, 1054, 1231
BstV2I	GAAGAC	1 cut(s)	635
BstX2I	RGATCY	1 cut(s)	2497
BstXI	CCANNNNNNTGG	1 cut(s)	1247
BstYI	RGATCY	1 cut(s)	2497
BstZ17I	GTATAC	1 cut(s)	938
Bsu15I	ATCGAT	2 cut(s)	148, 201
BsuRI	GGCC	8 cut(s)	72, 191, 453, 730, 782, 1787, 1824, 2355
BsuTUI	ATCGAT	2 cut(s)	148, 201
BtgI	CCRYGG	1 cut(s)	765
BtgZI	GCGATG	2 cut(s)	39, 61
BtrI	CACGTC	1 cut(s)	1058
BtsIMutI	CAGTG	3 cut(s)	918, 1559, 1846
BtuMI	TCGCGA	1 cut(s)	62
Cac8I	GCNNGC	2 cut(s)	282, 2228
CaiI	CAGNNNCTG	1 cut(s)	2399
CciI	TCATGA	2 cut(s)	624, 1089
CfoI	GCGC	5 cut(s)	7, 111, 139, 259, 779
Cfr13I	GGNCC	8 cut(s)	287, 692, 716, 781, 1823, 2354, 2417, 2466
ClaI	ATCGAT	2 cut(s)	148, 201
CseI	GACGC	2 cut(s)	143, 666
Csp6I	GTAC	3 cut(s)	373, 1121, 1678
CspCI	CAANNNNNGTGG	2 cut(s)	1494, 1529
CviQI	GTAC	3 cut(s)	373, 1121, 1678
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	5 cut(s)	131, 147, 432, 2499, 2526
DpnII	GATC	5 cut(s)	129, 145, 430, 2497, 2524
DraI	TTTAAA	2 cut(s)	1449, 2214
DrdI	GACNNNNNNGTC	1 cut(s)	1813
DriI	GACNNNNNGTC	1 cut(s)	690
DseDI	GACNNNNNNGTC	1 cut(s)	1813
EaeI	YGGCCR	3 cut(s)	189, 451, 1785
Eam1104I	CTCTTC	2 cut(s)	306, 588
Eam1105I	GACNNNNNGTC	1 cut(s)	690
EarI	CTCTTC	2 cut(s)	306, 588
Ecl136II	GAGCTC	1 cut(s)	598
Eco130I	CCWWGG	3 cut(s)	765, 877, 1196
Eco24I	GRGCYC	2 cut(s)	600, 1191
Eco31I	GGTCTC	1 cut(s)	618
Eco32I	GATATC	1 cut(s)	199
Eco47I	GGWCC	5 cut(s)	287, 692, 716, 2417, 2466
Eco53kI	GAGCTC	1 cut(s)	598
Eco57I	CTGAAG	1 cut(s)	2514
Eco88I	CYCGRG	2 cut(s)	162, 2066
EcoICRI	GAGCTC	1 cut(s)	598
EcoO109I	RGGNCCY	3 cut(s)	716, 1823, 2354
EcoRV	GATATC	1 cut(s)	199
EcoT14I	CCWWGG	3 cut(s)	765, 877, 1196
EcoT38I	GRGCYC	2 cut(s)	600, 1191
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	3 cut(s)	765, 877, 1196
FalI	AAGNNNNNCTT	2 cut(s)	1218, 1250
FaqI	GGGAC	2 cut(s)	697, 2160
FauI	CCCGC	1 cut(s)	2219
FauNDI	CATATG	2 cut(s)	1756, 2432
FblI	GTMKAC	1 cut(s)	937
Fnu4HI	GCNGC	8 cut(s)	122, 140, 208, 240, 780, 1043, 1245, 1788
FriOI	GRGCYC	2 cut(s)	600, 1191
Fsp4HI	GCNGC	8 cut(s)	122, 140, 208, 240, 780, 1043, 1245, 1788
FspBI	CTAG	7 cut(s)	720, 1259, 1308, 1898, 2364, 2451, 2623
GlaI	GCGC	5 cut(s)	6, 110, 138, 258, 778
GluI	GCNGC	8 cut(s)	122, 140, 208, 240, 780, 1043, 1245, 1788
GsaI	CCCAGC	3 cut(s)	611, 1251, 1533
GsuI	CTGGAG	1 cut(s)	828
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	8 cut(s)	72, 191, 453, 730, 782, 1787, 1824, 2355
HapII	CCGG	5 cut(s)	21, 33, 479, 1274, 2570
HgaI	GACGC	2 cut(s)	143, 666
HhaI	GCGC	5 cut(s)	7, 111, 139, 259, 779
Hin1I	GRCGYC	1 cut(s)	5
Hin6I	GCGC	5 cut(s)	5, 109, 137, 257, 777
HinP1I	GCGC	5 cut(s)	5, 109, 137, 257, 777
HincII	GTYRAC	1 cut(s)	1638
HindII	GTYRAC	1 cut(s)	1638
HindIII	AAGCTT	1 cut(s)	2179
HpaII	CCGG	5 cut(s)	21, 33, 479, 1274, 2570
HphI	GGTGA	5 cut(s)	500, 857, 973, 1118, 2120
Hpy166II	GTNNAC	7 cut(s)	91, 467, 541, 938, 1638, 1943, 2420
Hpy8I	GTNNAC	7 cut(s)	91, 467, 541, 938, 1638, 1943, 2420
Hpy99I	CGWCG	4 cut(s)	62, 137, 173, 682
HpyAV	CCTTC	7 cut(s)	56, 209, 741, 913, 988, 1102, 2479
HpyCH4III	ACNGT	5 cut(s)	319, 913, 1513, 1563, 2489
HpyCH4IV	ACGT	3 cut(s)	177, 1057, 1640
HpyF10VI	GCNNNNNNNGC	5 cut(s)	604, 752, 776, 1313, 2560
HpySE526I	ACGT	3 cut(s)	177, 1057, 1640
Hsp92I	GRCGYC	1 cut(s)	5
HspAI	GCGC	5 cut(s)	5, 109, 137, 257, 777
KasI	GGCGCC	1 cut(s)	4
Kpn2I	TCCGGA	1 cut(s)	2569
Kzo9I	GATC	5 cut(s)	129, 145, 430, 2497, 2524
LguI	GCTCTTC	1 cut(s)	588
LmnI	GCTCC	5 cut(s)	23, 277, 1194, 1484, 2447
Lsp1109I	GCAGC	3 cut(s)	226, 1054, 1231
LweI	GCATC	5 cut(s)	518, 1152, 1439, 1894, 1975
MaeI	CTAG	7 cut(s)	720, 1259, 1308, 1898, 2364, 2451, 2623
MaeII	ACGT	3 cut(s)	177, 1057, 1640
MaeIII	GTNAC	5 cut(s)	845, 1653, 1804, 1844, 2040
MalI	GATC	5 cut(s)	131, 147, 432, 2499, 2526
MbiI	CCGCTC	2 cut(s)	142, 1539
MboI	GATC	5 cut(s)	129, 145, 430, 2497, 2524
MboII	GAAGA	6 cut(s)	323, 605, 640, 981, 1138, 2507
MfeI	CAATTG	1 cut(s)	1263
MflI	RGATCY	1 cut(s)	2497
MhlI	GDGCHC	5 cut(s)	93, 177, 600, 1191, 1945
MlsI	TGGCCA	2 cut(s)	191, 453
MluNI	TGGCCA	2 cut(s)	191, 453
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	5 cut(s)	192, 229, 419, 536, 2012
MmeI	TCCRAC	1 cut(s)	243
Mox20I	TGGCCA	2 cut(s)	191, 453
MroI	TCCGGA	1 cut(s)	2569
MroXI	GAANNNNTTC	1 cut(s)	829
MscI	TGGCCA	2 cut(s)	191, 453
MseI	TTAA	7 cut(s)	336, 582, 972, 1079, 1385, 1448, 2213
MslI	CAYNNNNRTG	6 cut(s)	637, 1023, 1050, 1781, 1890, 2431
Msp20I	TGGCCA	2 cut(s)	191, 453
MspI	CCGG	5 cut(s)	21, 33, 479, 1274, 2570
MunI	CAATTG	1 cut(s)	1263
Mva1269I	GAATGC	1 cut(s)	1236
MvnI	CGCG	3 cut(s)	62, 137, 779
MwoI	GCNNNNNNNGC	5 cut(s)	604, 752, 776, 1313, 2560
NarI	GGCGCC	1 cut(s)	5
NciI	CCSGG	1 cut(s)	480
NcoI	CCATGG	1 cut(s)	765
NdeI	CATATG	2 cut(s)	1756, 2432
NdeII	GATC	5 cut(s)	129, 145, 430, 2497, 2524
NlaIV	GGNNCC	5 cut(s)	6, 19, 555, 1190, 2314
NmeAIII	GCCGAG	1 cut(s)	33
NmuCI	GTSAC	3 cut(s)	845, 1804, 1844
NruI	TCGCGA	1 cut(s)	62
NspI	RCATGY	2 cut(s)	109, 2063
NspV	TTCGAA	1 cut(s)	823
PaeR7I	CTCGAG	1 cut(s)	162
PagI	TCATGA	2 cut(s)	624, 1089
PciSI	GCTCTTC	1 cut(s)	588
PcsI	WCGNNNNNNNCGW	2 cut(s)	21, 141
PctI	GAATGC	1 cut(s)	1236
PdmI	GAANNNNTTC	1 cut(s)	829
PfeI	GAWTC	6 cut(s)	97, 150, 416, 1180, 2030, 2279
PflMI	CCANNNNNTGG	1 cut(s)	1714
PfoI	TCCNGGA	2 cut(s)	223, 805
PkrI	GCNGC	8 cut(s)	123, 141, 209, 241, 781, 1044, 1246, 1789
Ple19I	CGATCG	1 cut(s)	148
PleI	GAGTC	5 cut(s)	191, 228, 419, 536, 2011
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	5 cut(s)	191, 228, 419, 536, 2011
PpuMI	RGGWCCY	1 cut(s)	716
PsiI	TTATAA	2 cut(s)	665, 2253
Psp124BI	GAGCTC	1 cut(s)	600
Psp1406I	AACGTT	1 cut(s)	1640
Psp5II	RGGWCCY	1 cut(s)	716
PspFI	CCCAGC	3 cut(s)	607, 1247, 1529
PspN4I	GGNNCC	5 cut(s)	6, 19, 555, 1190, 2314
PspPI	GGNCC	8 cut(s)	287, 692, 716, 781, 1823, 2354, 2417, 2466
PspPPI	RGGWCCY	1 cut(s)	716
PspXI	VCTCGAGB	1 cut(s)	162
PstI	CTGCAG	1 cut(s)	1984
PstNI	CAGNNNCTG	1 cut(s)	2399
PsuI	RGATCY	1 cut(s)	2497
PvuI	CGATCG	1 cut(s)	148
RruI	TCGCGA	1 cut(s)	62
RsaI	GTAC	3 cut(s)	374, 1122, 1679
RsaNI	GTAC	3 cut(s)	373, 1121, 1678
RseI	CAYNNNNRTG	6 cut(s)	637, 1023, 1050, 1781, 1890, 2431
SacI	GAGCTC	1 cut(s)	600
SapI	GCTCTTC	1 cut(s)	588
SaqAI	TTAA	7 cut(s)	336, 582, 972, 1079, 1385, 1448, 2213
SatI	GCNGC	8 cut(s)	122, 140, 208, 240, 780, 1043, 1245, 1788
Sau3AI	GATC	5 cut(s)	129, 145, 430, 2497, 2524
Sau96I	GGNCC	8 cut(s)	287, 692, 716, 781, 1823, 2354, 2417, 2466
SchI	GAGTC	5 cut(s)	192, 229, 419, 536, 2012
SduI	GDGCHC	5 cut(s)	93, 177, 600, 1191, 1945
SfaNI	GCATC	5 cut(s)	518, 1152, 1439, 1894, 1975
SfcI	CTRYAG	3 cut(s)	355, 1818, 1980
SfoI	GGCGCC	1 cut(s)	6
Sfr274I	CTCGAG	1 cut(s)	162
SfuI	TTCGAA	1 cut(s)	823
SinI	GGWCC	5 cut(s)	287, 692, 716, 2417, 2466
SlaI	CTCGAG	1 cut(s)	162
SmiMI	CAYNNNNRTG	6 cut(s)	637, 1023, 1050, 1781, 1890, 2431
SmlI	CTYRAG	3 cut(s)	162, 1422, 2173
SmoI	CTYRAG	3 cut(s)	162, 1422, 2173
SsiI	CCGC	9 cut(s)	122, 140, 208, 690, 779, 1539, 1788, 1842, 2226
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	3 cut(s)	391, 828, 2347
SspMI	CTAG	7 cut(s)	720, 1259, 1308, 1898, 2364, 2451, 2623
SstI	GAGCTC	1 cut(s)	600
StyI	CCWWGG	3 cut(s)	765, 877, 1196
TaaI	ACNGT	5 cut(s)	319, 913, 1513, 1563, 2489
TaiI	ACGT	3 cut(s)	180, 1060, 1643
TauI	GCSGC	5 cut(s)	124, 142, 210, 782, 1790
TfiI	GAWTC	6 cut(s)	97, 150, 416, 1180, 2030, 2279
Tru1I	TTAA	7 cut(s)	336, 582, 972, 1079, 1385, 1448, 2213
Tru9I	TTAA	7 cut(s)	336, 582, 972, 1079, 1385, 1448, 2213
TscAI	CASTG	3 cut(s)	918, 1566, 1853
TseFI	GTSAC	3 cut(s)	845, 1804, 1844
TseI	GCWGC	3 cut(s)	239, 1042, 1244
Tsp45I	GTSAC	3 cut(s)	845, 1804, 1844
TspDTI	ATGAA	9 cut(s)	103, 613, 641, 1078, 1334, 1348, 1482, 1581, 2556
TspGWI	ACGGA	2 cut(s)	423, 1555
TspRI	CASTG	3 cut(s)	918, 1566, 1853
Van91I	CCANNNNNTGG	1 cut(s)	1714
VneI	GTGCAC	2 cut(s)	89, 1941
VpaK11BI	GGWCC	5 cut(s)	287, 692, 716, 2417, 2466
XceI	RCATGY	2 cut(s)	109, 2063
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1398
XhoI	CTCGAG	1 cut(s)	162
XmiI	GTMKAC	1 cut(s)	937
XmnI	GAANNNNTTC	1 cut(s)	829
XspI	CTAG	7 cut(s)	720, 1259, 1308, 1898, 2364, 2451, 2623

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.