RLG00000007463
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0005277
Physical Location & Seq
Reverse (-)
17087935 .. 17089157
1223 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007463

Sequence Viewer

Length: 477 bp
ATGCTGAACTCGAAGAGTGTAGATGAGTACAAATATCTGCAACAAAGCAATTGTTATTCCATTACTGGAGTTGATGATGCAGAAGAATTTCGTGTGGTCAAGGAAGCTCTAGATGTTGTCCATATTAACAAGGAAGACCAACAAAGTGTCTTTGCAATGCTTGCTGCAGTCTTGTGGCTGGGAAACATCTCATTTAGTGTGATTGATAATGCAAATCATGTGGAAGCTGTGGCAGATAAAGGTCTGTTTACTGTTGCTAAATTGGTTGGATGTAGCCCGGAGGAGCTTACGCTTGCTTTATCAATTAAGAGATTGGACATTAATATCCTTGTGATCATTCTCATTGGTCTGCAATCTCAGCTCCAAAGTCTTCCTGGTTCTCCCCCGAAAGGAGCAATAGCCAGCAATGGGGTCAATGAGAGCATAGGGATTTGCGATGAGAGCGGAATTTTCCATGCCAGTACCGGGATTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000146 GO:0000166 GO:0000278 GO:0000281 GO:0000302 GO:0000910 GO:0001891 GO:0001931 GO:0003674 GO:0003774 GO:0003779 GO:0003824 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005826 GO:0005829 GO:0005856 GO:0005886 GO:0005938 GO:0006928 GO:0006935 GO:0006950 GO:0006970 GO:0006971 GO:0006979 GO:0006996 GO:0007010 GO:0007015 GO:0007033 GO:0007049 GO:0007154 GO:0008064 GO:0008092 GO:0008104 GO:0008144 GO:0008150 GO:0008360 GO:0009267 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009636 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010243 GO:0010639 GO:0014070 GO:0014074 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016459 GO:0016460 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0022402 GO:0022603 GO:0022604 GO:0022607 GO:0030029 GO:0030030 GO:0030031 GO:0030036 GO:0030038 GO:0030048 GO:0030139 GO:0030554 GO:0030587 GO:0030832 GO:0030833 GO:0030837 GO:0030863 GO:0030864 GO:0030865 GO:0030866 GO:0030898 GO:0031033 GO:0031034 GO:0031152 GO:0031154 GO:0031254 GO:0031268 GO:0031270 GO:0031333 GO:0031410 GO:0031667 GO:0031668 GO:0031669 GO:0031982 GO:0032009 GO:0032060 GO:0032153 GO:0032155 GO:0032271 GO:0032272 GO:0032502 GO:0032535 GO:0032553 GO:0032555 GO:0032559 GO:0032796 GO:0032956 GO:0032970 GO:0032982 GO:0032991 GO:0033036 GO:0033043 GO:0033275 GO:0033298 GO:0033554 GO:0034461 GO:0034622 GO:0035639 GO:0036094 GO:0040011 GO:0042221 GO:0042330 GO:0042493 GO:0042542 GO:0042594 GO:0042623 GO:0042641 GO:0042802 GO:0042803 GO:0042995 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044459 GO:0044464 GO:0044764 GO:0044877 GO:0045177 GO:0045179 GO:0045335 GO:0046677 GO:0046683 GO:0046847 GO:0046983 GO:0048519 GO:0048523 GO:0048856 GO:0048870 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050982 GO:0051015 GO:0051017 GO:0051128 GO:0051129 GO:0051179 GO:0051301 GO:0051493 GO:0051494 GO:0051591 GO:0051606 GO:0051674 GO:0051703 GO:0051704 GO:0051716 GO:0060327 GO:0060328 GO:0061572 GO:0061640 GO:0065003 GO:0065007 GO:0065008 GO:0070252 GO:0070938 GO:0071496 GO:0071840 GO:0071889 GO:0071944 GO:0090066 GO:0090702 GO:0097159 GO:0097204 GO:0097367 GO:0097435 GO:0097708 GO:0098630 GO:0098743 GO:0099120 GO:0099568 GO:0099738 GO:0110053 GO:0120025 GO:0120031 GO:0120036 GO:1901265 GO:1901363 GO:1901698 GO:1901700 GO:1902903 GO:1902904 GO:1903047 GO:1990753
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IQ Myosin_head

Protein Analysis

159

Amino Acids

16.98

Weight (kDa)

4.61

Isoelectric Point (pI)

54.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myosin_head PF00063 3 - 108 8.3e-20 Myosin head (motor domain)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 444
AciI CCGC 1 cut(s) 444
AcsI RAATTY 2 cut(s) 86, 447
AfaI GTAC 2 cut(s) 29, 463
AfiI CCNNNNNNNGG 3 cut(s) 389, 408, 465
AjnI CCWGG 1 cut(s) 373
AluBI AGCT 4 cut(s) 107, 227, 286, 361
AluI AGCT 4 cut(s) 107, 227, 286, 361
ApeKI GCWGC 1 cut(s) 164
ApoI RAATTY 2 cut(s) 86, 447
AseI ATTAAT 1 cut(s) 321
Asp700I GAANNNNTTC 1 cut(s) 87
AsuC2I CCSGG 2 cut(s) 278, 466
BbsI GAAGAC 2 cut(s) 141, 362
BbvI GCAGC 1 cut(s) 151
BciT130I CCWGG 1 cut(s) 375
BclI TGATCA 1 cut(s) 333
BcnI CCSGG 2 cut(s) 278, 466
BfaI CTAG 1 cut(s) 110
BfmI CTRYAG 1 cut(s) 165
BisI GCNGC 1 cut(s) 165
BlsI GCNGC 1 cut(s) 166
Bme1390I CCNGG 3 cut(s) 278, 375, 466
BmrFI CCNGG 3 cut(s) 278, 375, 466
BmsI GCATC 1 cut(s) 67
BpiI GAAGAC 2 cut(s) 141, 362
BpmI CTGGAG 1 cut(s) 87
BpuMI CCSGG 2 cut(s) 278, 466
Bsc4I CCNNNNNNNGG 3 cut(s) 389, 408, 465
Bse1I ACTGG 2 cut(s) 70, 459
Bse3DI GCAATG 2 cut(s) 162, 412
BseBI CCWGG 1 cut(s) 375
BseGI GGATG 1 cut(s) 275
BseLI CCNNNNNNNGG 3 cut(s) 389, 408, 465
BseMI GCAATG 2 cut(s) 162, 412
BseMII CTCAG 1 cut(s) 371
BseNI ACTGG 2 cut(s) 70, 459
BseRI GAGGAG 1 cut(s) 296
BseXI GCAGC 1 cut(s) 151
BseYI CCCAGC 1 cut(s) 178
BsiSI CCGG 2 cut(s) 278, 465
BslI CCNNNNNNNGG 3 cut(s) 389, 408, 465
Bsp143I GATC 1 cut(s) 333
BspACI CCGC 1 cut(s) 444
BspCNI CTCAG 1 cut(s) 370
BspMAI CTGCAG 1 cut(s) 169
BsrBI CCGCTC 1 cut(s) 444
BsrDI GCAATG 2 cut(s) 162, 412
BsrI ACTGG 2 cut(s) 70, 459
BssMI GATC 1 cut(s) 333
Bst2UI CCWGG 1 cut(s) 375
Bst4CI ACNGT 1 cut(s) 253
Bst6I CTCTTC 1 cut(s) 8
BstAPI GCANNNNNTGC 1 cut(s) 161
BstC8I GCNNGC 3 cut(s) 162, 294, 403
BstDEI CTNAG 1 cut(s) 357
BstF5I GGATG 1 cut(s) 275
BstKTI GATC 1 cut(s) 336
BstMBI GATC 1 cut(s) 333
BstMWI GCNNNNNNNGC 3 cut(s) 161, 358, 441
BstNI CCWGG 1 cut(s) 375
BstSCI CCNGG 3 cut(s) 276, 373, 464
BstSFI CTRYAG 1 cut(s) 165
BstV1I GCAGC 1 cut(s) 151
BstV2I GAAGAC 2 cut(s) 141, 362
BtgZI GCGATG 1 cut(s) 450
BtsCI GGATG 1 cut(s) 275
Cac8I GCNNGC 3 cut(s) 162, 294, 403
Csp6I GTAC 2 cut(s) 28, 462
CspCI CAANNNNNGTGG 2 cut(s) 201, 236
CviAII CATG 2 cut(s) 218, 455
CviJI RGCY 7 cut(s) 107, 178, 227, 276, 286, 361, 401
CviKI_1 RGCY 7 cut(s) 107, 178, 227, 276, 286, 361, 401
CviQI GTAC 2 cut(s) 28, 462
DdeI CTNAG 1 cut(s) 357
DpnI GATC 1 cut(s) 335
DpnII GATC 1 cut(s) 333
Eam1104I CTCTTC 1 cut(s) 8
EarI CTCTTC 1 cut(s) 8
EcoRII CCWGG 1 cut(s) 373
FaeI CATG 2 cut(s) 221, 458
FaiI YATR 4 cut(s) 123, 219, 425, 456
FatI CATG 2 cut(s) 217, 454
FbaI TGATCA 1 cut(s) 333
Fnu4HI GCNGC 1 cut(s) 165
FokI GGATG 1 cut(s) 282
Fsp4HI GCNGC 1 cut(s) 165
FspBI CTAG 1 cut(s) 110
GluI GCNGC 1 cut(s) 165
GsaI CCCAGC 1 cut(s) 182
GsuI CTGGAG 1 cut(s) 87
HapII CCGG 2 cut(s) 278, 465
Hin1II CATG 2 cut(s) 221, 458
HinfI GANTC 1 cut(s) 469
HpaII CCGG 2 cut(s) 278, 465
Hpy166II GTNNAC 1 cut(s) 249
Hpy188III TCNNGA 1 cut(s) 110
Hpy8I GTNNAC 1 cut(s) 249
HpyCH4III ACNGT 1 cut(s) 253
HpyCH4V TGCA 6 cut(s) 40, 80, 155, 167, 212, 352
HpyF10VI GCNNNNNNNGC 3 cut(s) 161, 358, 441
HpyF3I CTNAG 1 cut(s) 357
Hsp92II CATG 2 cut(s) 221, 458
Ksp22I TGATCA 1 cut(s) 333
Kzo9I GATC 1 cut(s) 333
LmnI GCTCC 3 cut(s) 283, 366, 392
LpnPI CCDG 7 cut(s) 51, 164, 291, 360, 387, 415, 472
Lsp1109I GCAGC 1 cut(s) 151
LweI GCATC 1 cut(s) 67
MaeI CTAG 1 cut(s) 110
MalI GATC 1 cut(s) 335
MbiI CCGCTC 1 cut(s) 444
MboI GATC 1 cut(s) 333
MboII GAAGA 4 cut(s) 25, 95, 146, 362
MfeI CAATTG 1 cut(s) 49
MluCI AATT 5 cut(s) 49, 86, 260, 303, 447
MmeI TCCRAC 1 cut(s) 247
MnlI CCTC 1 cut(s) 274
MroXI GAANNNNTTC 1 cut(s) 87
MseI TTAA 3 cut(s) 126, 306, 321
MspI CCGG 2 cut(s) 278, 465
MspR9I CCNGG 3 cut(s) 278, 375, 466
MunI CAATTG 1 cut(s) 49
MvaI CCWGG 1 cut(s) 375
MwoI GCNNNNNNNGC 3 cut(s) 161, 358, 441
NciI CCSGG 2 cut(s) 278, 466
NdeII GATC 1 cut(s) 333
NlaIII CATG 2 cut(s) 221, 458
PdmI GAANNNNTTC 1 cut(s) 87
PfeI GAWTC 1 cut(s) 469
PkrI GCNGC 1 cut(s) 166
PshBI ATTAAT 1 cut(s) 321
Psp6I CCWGG 1 cut(s) 373
PspFI CCCAGC 1 cut(s) 178
PspGI CCWGG 1 cut(s) 373
PstI CTGCAG 1 cut(s) 169
RsaI GTAC 2 cut(s) 29, 463
RsaNI GTAC 2 cut(s) 28, 462
SaqAI TTAA 3 cut(s) 126, 306, 321
SatI GCNGC 1 cut(s) 165
Sau3AI GATC 1 cut(s) 333
ScrFI CCNGG 3 cut(s) 278, 375, 466
SetI ASST 5 cut(s) 109, 229, 244, 288, 363
SfaNI GCATC 1 cut(s) 67
SfcI CTRYAG 1 cut(s) 165
Sse9I AATT 5 cut(s) 49, 86, 260, 303, 447
SsiI CCGC 1 cut(s) 444
SspMI CTAG 1 cut(s) 110
StyD4I CCNGG 3 cut(s) 276, 373, 464
TaaI ACNGT 1 cut(s) 253
TaqI TCGA 1 cut(s) 11
TasI AATT 5 cut(s) 49, 86, 260, 303, 447
TatI WGTACW 1 cut(s) 27
TfiI GAWTC 1 cut(s) 469
Tru1I TTAA 3 cut(s) 126, 306, 321
Tru9I TTAA 3 cut(s) 126, 306, 321
TseI GCWGC 1 cut(s) 164
VspI ATTAAT 1 cut(s) 321
XapI RAATTY 2 cut(s) 86, 447
XbaI TCTAGA 1 cut(s) 109
XcmI CCANNNNNNNNNTGG 1 cut(s) 371
XmnI GAANNNNTTC 1 cut(s) 87
XspI CTAG 1 cut(s) 110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.