No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000007863 RLG00000028777 |
| rosa_roxburghii | Rroxscaffold_7G00177670 Rroxscaffold_7G00178150 |
| rosa_rugosa | Rorug05G0552600 |
| rosa_samantha | Rh1DG169200 Rh2DG630400 Rh6BG090300 Rh7CG411700 Rh7DG011600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 2 cut(s) | 71, 193 |
| AccI | GTMKAC | 2 cut(s) | 25, 57 |
| AciI | CCGC | 2 cut(s) | 71, 193 |
| AcyI | GRCGYC | 2 cut(s) | 176, 242 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 38, 275 |
| Alw26I | GTCTC | 2 cut(s) | 259, 326 |
| Ama87I | CYCGRG | 1 cut(s) | 269 |
| ApeKI | GCWGC | 1 cut(s) | 139 |
| AsuHPI | GGTGA | 1 cut(s) | 259 |
| AvaI | CYCGRG | 1 cut(s) | 269 |
| BbvI | GCAGC | 1 cut(s) | 151 |
| BccI | CCATC | 8 cut(s) | 56, 83, 110, 124, 151, 178, 217, 250 |
| BceAI | ACGGC | 1 cut(s) | 16 |
| BcoDI | GTCTC | 2 cut(s) | 259, 326 |
| BisI | GCNGC | 3 cut(s) | 72, 140, 194 |
| BlsI | GCNGC | 3 cut(s) | 73, 141, 195 |
| BmeT110I | CYCGRG | 1 cut(s) | 269 |
| BoxI | GACNNNNGTC | 1 cut(s) | 271 |
| BpmI | CTGGAG | 1 cut(s) | 297 |
| BsaHI | GRCGYC | 2 cut(s) | 176, 242 |
| BsaI | GGTCTC | 1 cut(s) | 259 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 38, 275 |
| BseGI | GGATG | 1 cut(s) | 261 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 38, 275 |
| BseRI | GAGGAG | 1 cut(s) | 275 |
| BseXI | GCAGC | 1 cut(s) | 151 |
| Bsh1285I | CGRYCG | 2 cut(s) | 78, 146 |
| BsiEI | CGRYCG | 2 cut(s) | 78, 146 |
| BsiHKCI | CYCGRG | 1 cut(s) | 269 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 38, 275 |
| BsmAI | GTCTC | 2 cut(s) | 259, 326 |
| Bso31I | GGTCTC | 1 cut(s) | 259 |
| BsoBI | CYCGRG | 1 cut(s) | 269 |
| Bsp143I | GATC | 3 cut(s) | 75, 143, 197 |
| BspACI | CCGC | 2 cut(s) | 71, 193 |
| BspTNI | GGTCTC | 1 cut(s) | 259 |
| BsrBI | CCGCTC | 2 cut(s) | 71, 193 |
| BssMI | GATC | 3 cut(s) | 75, 143, 197 |
| BssNI | GRCGYC | 2 cut(s) | 176, 242 |
| BstACI | GRCGYC | 2 cut(s) | 176, 242 |
| BstF5I | GGATG | 1 cut(s) | 261 |
| BstKTI | GATC | 3 cut(s) | 78, 146, 200 |
| BstMAI | GTCTC | 2 cut(s) | 259, 326 |
| BstMBI | GATC | 3 cut(s) | 75, 143, 197 |
| BstMCI | CGRYCG | 2 cut(s) | 78, 146 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 131 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 271 |
| BstV1I | GCAGC | 1 cut(s) | 151 |
| BtsCI | GGATG | 1 cut(s) | 261 |
| CseI | GACGC | 3 cut(s) | 97, 165, 231 |
| CviAII | CATG | 2 cut(s) | 320, 336 |
| CviJI | RGCY | 1 cut(s) | 31 |
| CviKI_1 | RGCY | 1 cut(s) | 31 |
| DpnI | GATC | 3 cut(s) | 77, 145, 199 |
| DpnII | GATC | 3 cut(s) | 75, 143, 197 |
| Eco31I | GGTCTC | 1 cut(s) | 259 |
| Eco88I | CYCGRG | 1 cut(s) | 269 |
| FaeI | CATG | 2 cut(s) | 323, 339 |
| FaiI | YATR | 3 cut(s) | 13, 321, 337 |
| FatI | CATG | 2 cut(s) | 319, 335 |
| FblI | GTMKAC | 2 cut(s) | 25, 57 |
| Fnu4HI | GCNGC | 3 cut(s) | 72, 140, 194 |
| FokI | GGATG | 1 cut(s) | 268 |
| Fsp4HI | GCNGC | 3 cut(s) | 72, 140, 194 |
| GluI | GCNGC | 3 cut(s) | 72, 140, 194 |
| GsuI | CTGGAG | 1 cut(s) | 297 |
| HgaI | GACGC | 3 cut(s) | 97, 165, 231 |
| Hin1I | GRCGYC | 2 cut(s) | 176, 242 |
| Hin1II | CATG | 2 cut(s) | 323, 339 |
| HincII | GTYRAC | 2 cut(s) | 26, 58 |
| HindII | GTYRAC | 2 cut(s) | 26, 58 |
| HinfI | GANTC | 1 cut(s) | 272 |
| HphI | GGTGA | 1 cut(s) | 259 |
| Hpy166II | GTNNAC | 2 cut(s) | 26, 58 |
| Hpy188I | TCNGA | 4 cut(s) | 80, 148, 202, 214 |
| Hpy188III | TCNNGA | 1 cut(s) | 276 |
| Hpy8I | GTNNAC | 2 cut(s) | 26, 58 |
| Hpy99I | CGWCG | 6 cut(s) | 27, 62, 113, 130, 181, 247 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 131 |
| Hsp92I | GRCGYC | 2 cut(s) | 176, 242 |
| Hsp92II | CATG | 2 cut(s) | 323, 339 |
| Kzo9I | GATC | 3 cut(s) | 75, 143, 197 |
| LpnPI | CCDG | 1 cut(s) | 261 |
| Lsp1109I | GCAGC | 1 cut(s) | 151 |
| MalI | GATC | 3 cut(s) | 77, 145, 199 |
| MbiI | CCGCTC | 2 cut(s) | 71, 193 |
| MboI | GATC | 3 cut(s) | 75, 143, 197 |
| MluCI | AATT | 2 cut(s) | 5, 307 |
| MlyI | GAGTC | 1 cut(s) | 281 |
| MmeI | TCCRAC | 1 cut(s) | 192 |
| MnlI | CCTC | 6 cut(s) | 76, 144, 201, 210, 243, 253 |
| MslI | CAYNNNNRTG | 1 cut(s) | 324 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 131 |
| NdeII | GATC | 3 cut(s) | 75, 143, 197 |
| NlaIII | CATG | 2 cut(s) | 323, 339 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 84, 218 |
| PkrI | GCNGC | 3 cut(s) | 73, 141, 195 |
| Ple19I | CGATCG | 2 cut(s) | 78, 146 |
| PleI | GAGTC | 1 cut(s) | 280 |
| PpsI | GAGTC | 1 cut(s) | 280 |
| PshAI | GACNNNNGTC | 1 cut(s) | 271 |
| PvuI | CGATCG | 2 cut(s) | 78, 146 |
| RseI | CAYNNNNRTG | 1 cut(s) | 324 |
| SalI | GTCGAC | 2 cut(s) | 24, 56 |
| SatI | GCNGC | 3 cut(s) | 72, 140, 194 |
| Sau3AI | GATC | 3 cut(s) | 75, 143, 197 |
| SchI | GAGTC | 1 cut(s) | 281 |
| SetI | ASST | 6 cut(s) | 40, 87, 155, 212, 221, 297 |
| SgeI | CNNG | 4 cut(s) | 281, 283, 288, 332 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 324 |
| Sse9I | AATT | 2 cut(s) | 5, 307 |
| SsiI | CCGC | 2 cut(s) | 71, 193 |
| TaqI | TCGA | 6 cut(s) | 25, 57, 87, 111, 179, 221 |
| TasI | AATT | 2 cut(s) | 5, 307 |
| TauI | GCSGC | 2 cut(s) | 74, 196 |
| TseI | GCWGC | 1 cut(s) | 139 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| XmiI | GTMKAC | 2 cut(s) | 25, 57 |