Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0014140

Physical Location & Seq

Genomic Coordinates Forward (+)

41246896 .. 41250831

Gene Structure 3936 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000008859

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGATTACCAACCTCTTTCCTTTCTTCTTCTTCTTCCTCTTCTTCTTTCTCTCCTCTGCTTCACTCTGTCTCTCCTATGAACCTCGCAACCATGAAGTGGTGGCTTTGATAAACTTGAAGAGCACTTTGAATGATCCTCATGGGGTTTTAACCAACTGGGATGGAGACTCTGTAGACCCATGTAGCTGGGCTATGATCACTTGCTCATCTGAGAATGTTGTTGTAGGCCTAGGAGCTCCAAGCCAGTCTCTGTCTGGAACTTTAACTGCGGCTATAGGAAATCTCACAAATCTTCGACAAGTGTTGCTGCAGAACAACAATATATCAGGTAAACTCCCAGCGGAGCTCGGTACTCTTCCCAAGCTTCAAACTCTAGATCTCTCCAATAATCGGTTCTCGGGCGTCGTCCCAGACTCTCTGGGTCAGTTGAGTAGTCTGCAATACCTGAGGCTGAACAACAATAGCTTGTCTGGGGTTTTCCCTGTGTCTTTAGCCAAAATCCCTGCGCTTGCTTTCTTGGACTTGTCTTATAACAATCTTAGTGGACCAATACCCAAATTCCCAGCCAGAACTTTCAATGTTGTCGGAAACCCACTGATTTGTGGAAGCAGCTCCACAGAAGGATGCTCTGGATCGGCCCCTGTCCCTCTTTCGTTGTCACTAAAACCATCACCTGGAAAAAACAAGTCCAAGATAGTAGCAATTGCACTTGGGGTGAGCTTCAGTTGTGCCTTCCTCATGCTCTTATCACTTGGAATCCTCTGGTACAGAAAGAAGCAGAAGGGCCAAACCATTCTGAACATCAGTGACATTCAAGAAGAGGGACTTGTGAGCTTAGGCAACCTCAGAAACTTCACTTTCAAAGAGCTTCAAGTTGCCACGGACCATTTTAGCTCCAAGAACATACTGGGTGCTGGAGGTTTTGGGAATGTGTACAAGGGAAAGCTAGGGGATGGGACTATGGTGGCAGTGAAACGACTCAAGGATGTAACAGGAACAGCTGGAGAGTCACAATTTAGGACAGAATTAGAGATGATAAGCCTAGCAGTGCACCGGAATTTGCTTCGGTTAATTGGATATTGTGCTACTTCTAATGAGAGGCTTCTGGTGTACCCATACATGTCCAATGGCAGTGTCGCCTTCAGGCTTAGAGTCACAACAGGAAAGCCAGCACTAGATTGGAGCACAAGGAAGAGAATAGCAATTGGAGCTGCTAGAGGTCTTCTGTATCTACATGAGCAATGTGATCCAAAGATTATACACAGAGACGTGAAGGCTGCAAATGTGCTCCTAGATGATTACTGCGAGGCAATTGTTGGTGATTTTGGCCTTGCAAAGCTCCTCGACCATGCTGATTCTCATGTGACCACTGCTGTCCGTGGGACTGTTGGGCATATTGCACCAGAATACCTTTCTACTGGTCAATCATCTGAAAAAACTGATGTTTTTGGATTCGGCATTCTCTTGATAGAGCTCATAACTGGGATGAGAGCTCTGGAGTTTGGCAAAACAGTTAATCAGAAAGGAGCCATGCTTGAGTGGGTGAAGACAGTACAACAAGAAAAGAAAGTGGAGCTCTTGGTGGATAGAGAACTGGGGAACAATTACGATCGGATTGAGGTTGGTGAAATGCTGCAAGTGGCTCTTTTATGCACTCAATACCTACCAGCTCACCGCCCCAAGATGTCGGAAGTGGTCCGGATGCTTGAAGGCGACGGACTAGCGGAAAAATGGGCAGCGTCACACAATCATAGTAAATCCAACATGGACCTCATCCATACTCACAACAGTAGCAAAAGCACTCCTCACAGTACTTGGAATGCATCGAAACATGATGGCACTGAACGCATGTTTGGCACATCTATGGATGAGGATGATGATGAGCATTCCTTGGATTCCTATGCCATGGAACTCTCGGGTCCCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004713 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009987 GO:0010150 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018108 GO:0018193 GO:0018212 GO:0019199 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0090693 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

643

Amino Acids

70.05

Weight (kDa)

6.99

Isoelectric Point (pI)

32.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	30 - 69	5.4e-13	Leucine rich repeat N-terminal domain
LRR_14	PF23598	89 - 174	6e-10	Leucine-rich repeat region
LRR_4	PF12799	96 - 131	9e-07	Leucine Rich repeats (2 copies)
LRR_8	PF13855	120 - 180	1.5e-13	Leucine rich repeat
Pkinase	PF00069	298 - 565	9.5e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	300 - 569	7.1e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014140)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23950 AT4G30520
fragaria_vesca	FvH4_4g08870 FvH4_4g08870
malus_domestica	MD16G1259200.v1.1
prunus_persica	Prupe.1G100800_v2.0.a1
pyrus_communis	pycom16g22670
rosa_chinensis	RchiOBHm_Chr4g0405301
rosa_laevigata	RLG00000008859
rosa_multiflora	Rmu_sc0000161.1_g000017
rosa_roxburghii	Rroxscaffold_5G00349670
rosa_rugosa	Rorug04G0057100 Rorug04G0057200
rosa_samantha	Rh4AG130600 Rh4CG137500 Rh4DG124000
rosa_wichuraiana	Rw4G010570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	531
AccB7I	CCANNNNNTGG	2 cut(s)	97, 674
AccI	GTMKAC	1 cut(s)	174
AccIII	TCCGGA	1 cut(s)	1698
AciI	CCGC	4 cut(s)	269, 341, 1675, 1724
AclWI	GGATC	3 cut(s)	128, 640, 1241
AcsI	RAATTY	2 cut(s)	557, 1057
AcuI	CTGAAG	2 cut(s)	706, 1126
AcyI	GRCGYC	1 cut(s)	402
AfaI	GTAC	6 cut(s)	352, 767, 935, 1112, 1554, 1813
AfiI	CCNNNNNNNGG	3 cut(s)	97, 390, 674
AflIII	ACRYGT	1 cut(s)	1119
AgsI	TTSAA	8 cut(s)	118, 130, 368, 577, 815, 862, 872, 1709
AjiI	CACGTC	1 cut(s)	1270
AjnI	CCWGG	1 cut(s)	673
AjuI	GAANNNNNNNTTGG	4 cut(s)	377, 409, 1836, 1868
Alw21I	GWGCWC	9 cut(s)	125, 238, 348, 1053, 1187, 1290, 1476, 1495, 1578
Alw26I	GTCTC	4 cut(s)	74, 159, 252, 1260
Alw44I	GTGCAC	1 cut(s)	1049
AlwI	GGATC	3 cut(s)	128, 640, 1241
AlwNI	CAGNNNCTG	1 cut(s)	250
Ama87I	CYCGRG	2 cut(s)	397, 1915
Aor13HI	TCCGGA	1 cut(s)	1698
AoxI	GGCC	4 cut(s)	226, 636, 784, 1327
ApaLI	GTGCAC	1 cut(s)	1049
ApeKI	GCWGC	6 cut(s)	307, 609, 1211, 1277, 1633, 1736
ApoI	RAATTY	2 cut(s)	557, 1057
AspA2I	CCTAGG	1 cut(s)	229
AspLEI	GCGC	1 cut(s)	508
AspS9I	GGNCC	7 cut(s)	545, 637, 784, 883, 1696, 1768, 1919
AsuHPI	GGTGA	6 cut(s)	663, 727, 1331, 1555, 1637, 1664
AvaI	CYCGRG	2 cut(s)	397, 1915
AvaII	GGWCC	5 cut(s)	545, 883, 1696, 1768, 1919
AvrII	CCTAGG	1 cut(s)	229
AxyI	CCTNAGG	1 cut(s)	446
BaeGI	GKGCMC	1 cut(s)	1053
BanII	GRGCYC	5 cut(s)	238, 348, 1476, 1495, 1578
BbsI	GAAGAC	2 cut(s)	1214, 1553
Bbv12I	GWGCWC	9 cut(s)	125, 238, 348, 1053, 1187, 1290, 1476, 1495, 1578
BbvI	GCAGC	6 cut(s)	294, 621, 1198, 1264, 1620, 1748
BccI	CCATC	4 cut(s)	155, 676, 947, 1829
BciT130I	CCWGG	1 cut(s)	675
BclI	TGATCA	1 cut(s)	195
BcoDI	GTCTC	4 cut(s)	74, 159, 252, 1260
BfaI	CTAG	8 cut(s)	230, 374, 947, 1043, 1175, 1215, 1292, 1721
BfmI	CTRYAG	3 cut(s)	171, 273, 308
BglII	AGATCT	1 cut(s)	376
BisI	GCNGC	7 cut(s)	270, 308, 610, 1212, 1278, 1634, 1737
BlnI	CCTAGG	1 cut(s)	229
BlsI	GCNGC	7 cut(s)	271, 309, 611, 1213, 1279, 1635, 1738
BmcAI	AGTACT	1 cut(s)	1813
Bme1390I	CCNGG	1 cut(s)	675
Bme18I	GGWCC	5 cut(s)	545, 883, 1696, 1768, 1919
BmeT110I	CYCGRG	2 cut(s)	397, 1915
BmgBI	CACGTC	1 cut(s)	1270
BmgT120I	GGNCC	7 cut(s)	545, 637, 784, 883, 1696, 1768, 1919
BmiI	GGNNCC	4 cut(s)	639, 1528, 1920, 1921
BmrFI	CCNGG	1 cut(s)	675
BmrI	ACTGGG	4 cut(s)	166, 917, 1491, 1604
BmsI	GCATC	3 cut(s)	614, 1692, 1832
BmuI	ACTGGG	4 cut(s)	166, 917, 1491, 1604
BpiI	GAAGAC	2 cut(s)	1214, 1553
BpmI	CTGGAG	3 cut(s)	936, 1023, 1517
Bpu10I	CCTNAGC	1 cut(s)	835
BpuEI	CTTGAG	2 cut(s)	965, 1556
BsaHI	GRCGYC	1 cut(s)	402
BsaJI	CCNNGG	5 cut(s)	229, 879, 1378, 1890, 1905
BsaWI	WCCGGW	2 cut(s)	1053, 1698
BsaXI	ACNNNNNCTCC	2 cut(s)	156, 186
Bsc4I	CCNNNNNNNGG	3 cut(s)	97, 390, 674
Bse1I	ACTGG	6 cut(s)	161, 244, 912, 1423, 1486, 1599
Bse21I	CCTNAGG	1 cut(s)	446
Bse3DI	GCAATG	1 cut(s)	1247
BseAI	TCCGGA	1 cut(s)	1698
BseBI	CCWGG	1 cut(s)	675
BseDI	CCNNGG	5 cut(s)	229, 879, 1378, 1890, 1905
BseGI	GGATG	9 cut(s)	166, 629, 958, 991, 1491, 1707, 1773, 1873, 1879
BseLI	CCNNNNNNNGG	3 cut(s)	97, 390, 674
BseMI	GCAATG	1 cut(s)	1247
BseMII	CTCAG	3 cut(s)	201, 437, 859
BseNI	ACTGG	6 cut(s)	161, 244, 912, 1423, 1486, 1599
BseRI	GAGGAG	3 cut(s)	43, 1331, 1794
BseSI	GKGCMC	1 cut(s)	1053
BseXI	GCAGC	6 cut(s)	294, 621, 1198, 1264, 1620, 1748
BseYI	CCCAGC	3 cut(s)	186, 337, 562
Bsh1285I	CGRYCG	1 cut(s)	1612
BshFI	GGCC	4 cut(s)	228, 638, 786, 1329
BsiEI	CGRYCG	1 cut(s)	1612
BsiHKAI	GWGCWC	9 cut(s)	125, 238, 348, 1053, 1187, 1290, 1476, 1495, 1578
BsiHKCI	CYCGRG	2 cut(s)	397, 1915
BsiSI	CCGG	2 cut(s)	1054, 1699
BslFI	GGGAC	6 cut(s)	392, 629, 837, 970, 1396, 1905
BslI	CCNNNNNNNGG	3 cut(s)	97, 390, 674
BsmAI	GTCTC	4 cut(s)	74, 159, 252, 1260
BsmBI	CGTCTC	1 cut(s)	1260
BsmFI	GGGAC	6 cut(s)	392, 629, 837, 970, 1396, 1905
BsmI	GAATGC	3 cut(s)	1458, 1825, 1885
BsnI	GGCC	4 cut(s)	228, 638, 786, 1329
BsoBI	CYCGRG	2 cut(s)	397, 1915
Bsp1286I	GDGCHC	9 cut(s)	125, 238, 348, 1053, 1187, 1290, 1476, 1495, 1578
Bsp13I	TCCGGA	1 cut(s)	1698
Bsp1407I	TGTACA	1 cut(s)	933
Bsp143I	GATC	6 cut(s)	133, 195, 376, 632, 1246, 1609
Bsp19I	CCATGG	1 cut(s)	1905
BspACI	CCGC	4 cut(s)	269, 341, 1675, 1724
BspANI	GGCC	4 cut(s)	228, 638, 786, 1329
BspCNI	CTCAG	3 cut(s)	202, 438, 858
BspEI	TCCGGA	1 cut(s)	1698
BspLI	GGNNCC	4 cut(s)	639, 1528, 1920, 1921
BspMAI	CTGCAG	1 cut(s)	312
BspPI	GGATC	3 cut(s)	128, 640, 1241
BspQI	GCTCTTC	1 cut(s)	113
BsrDI	GCAATG	1 cut(s)	1247
BsrGI	TGTACA	1 cut(s)	933
BsrI	ACTGG	6 cut(s)	161, 244, 912, 1423, 1486, 1599
BssECI	CCNNGG	5 cut(s)	229, 879, 1378, 1890, 1905
BssMI	GATC	6 cut(s)	133, 195, 376, 632, 1246, 1609
BssNI	GRCGYC	1 cut(s)	402
BssT1I	CCWWGG	3 cut(s)	229, 1890, 1905
Bst2UI	CCWGG	1 cut(s)	675
Bst4CI	ACNGT	5 cut(s)	1387, 1513, 1552, 1790, 1811
Bst6I	CTCTTC	5 cut(s)	44, 113, 360, 813, 1187
BstACI	GRCGYC	1 cut(s)	402
BstAUI	TGTACA	1 cut(s)	933
BstC8I	GCNNGC	2 cut(s)	510, 1170
BstDEI	CTNAG	6 cut(s)	210, 446, 539, 835, 845, 1148
BstDSI	CCRYGG	3 cut(s)	879, 1378, 1905
BstF5I	GGATG	9 cut(s)	166, 629, 958, 991, 1491, 1707, 1773, 1873, 1879
BstHHI	GCGC	1 cut(s)	508
BstKTI	GATC	6 cut(s)	136, 198, 379, 635, 1249, 1612
BstMAI	GTCTC	4 cut(s)	74, 159, 252, 1260
BstMBI	GATC	6 cut(s)	133, 195, 376, 632, 1246, 1609
BstMCI	CGRYCG	1 cut(s)	1612
BstMWI	GCNNNNNNNGC	3 cut(s)	1208, 1845, 1854
BstNI	CCWGG	1 cut(s)	675
BstNSI	RCATGY	2 cut(s)	1123, 1852
BstSCI	CCNGG	1 cut(s)	673
BstSFI	CTRYAG	3 cut(s)	171, 273, 308
BstSLI	GKGCMC	1 cut(s)	1053
BstV1I	GCAGC	6 cut(s)	294, 621, 1198, 1264, 1620, 1748
BstV2I	GAAGAC	2 cut(s)	1214, 1553
BstX2I	RGATCY	1 cut(s)	376
BstXI	CCANNNNNNTGG	1 cut(s)	186
BstYI	RGATCY	1 cut(s)	376
Bsu36I	CCTNAGG	1 cut(s)	446
BsuRI	GGCC	4 cut(s)	228, 638, 786, 1329
BtgI	CCRYGG	3 cut(s)	879, 1378, 1905
BtrI	CACGTC	1 cut(s)	1270
BtsCI	GGATG	9 cut(s)	166, 629, 958, 991, 1491, 1707, 1773, 1873, 1879
BtsI	GCAGTG	4 cut(s)	975, 1053, 1138, 1368
BtsIMutI	CAGTG	7 cut(s)	593, 811, 975, 1053, 1138, 1368, 1839
Cac8I	GCNNGC	2 cut(s)	510, 1170
CaiI	CAGNNNCTG	1 cut(s)	250
CfoI	GCGC	1 cut(s)	508
Cfr13I	GGNCC	7 cut(s)	545, 637, 784, 883, 1696, 1768, 1919
CseI	GACGC	2 cut(s)	391, 1728
Csp6I	GTAC	6 cut(s)	351, 766, 934, 1111, 1553, 1812
CspCI	CAANNNNNGTGG	2 cut(s)	523, 558
CviQI	GTAC	6 cut(s)	351, 766, 934, 1111, 1553, 1812
DdeI	CTNAG	6 cut(s)	210, 446, 539, 835, 845, 1148
DpnI	GATC	6 cut(s)	135, 197, 378, 634, 1248, 1611
DpnII	GATC	6 cut(s)	133, 195, 376, 632, 1246, 1609
Eam1104I	CTCTTC	5 cut(s)	44, 113, 360, 813, 1187
EarI	CTCTTC	5 cut(s)	44, 113, 360, 813, 1187
Ecl136II	GAGCTC	5 cut(s)	236, 346, 1474, 1493, 1576
Eco130I	CCWWGG	3 cut(s)	229, 1890, 1905
Eco147I	AGGCCT	1 cut(s)	228
Eco24I	GRGCYC	5 cut(s)	238, 348, 1476, 1495, 1578
Eco47I	GGWCC	5 cut(s)	545, 883, 1696, 1768, 1919
Eco53kI	GAGCTC	5 cut(s)	236, 346, 1474, 1493, 1576
Eco57I	CTGAAG	2 cut(s)	706, 1126
Eco81I	CCTNAGG	1 cut(s)	446
Eco88I	CYCGRG	2 cut(s)	397, 1915
EcoICRI	GAGCTC	5 cut(s)	236, 346, 1474, 1493, 1576
EcoO109I	RGGNCCY	1 cut(s)	1919
EcoRII	CCWGG	1 cut(s)	673
EcoT14I	CCWWGG	3 cut(s)	229, 1890, 1905
EcoT22I	ATGCAT	1 cut(s)	1825
EcoT38I	GRGCYC	5 cut(s)	238, 348, 1476, 1495, 1578
ErhI	CCWWGG	3 cut(s)	229, 1890, 1905
Esp3I	CGTCTC	1 cut(s)	1260
FalI	AAGNNNNNCTT	4 cut(s)	810, 842, 1629, 1661
FaqI	GGGAC	6 cut(s)	392, 629, 837, 970, 1396, 1905
FbaI	TGATCA	1 cut(s)	195
FblI	GTMKAC	1 cut(s)	174
Fnu4HI	GCNGC	7 cut(s)	270, 308, 610, 1212, 1278, 1634, 1737
FokI	GGATG	9 cut(s)	173, 636, 965, 998, 1498, 1714, 1760, 1880, 1886
FriOI	GRGCYC	5 cut(s)	238, 348, 1476, 1495, 1578
Fsp4HI	GCNGC	7 cut(s)	270, 308, 610, 1212, 1278, 1634, 1737
FspBI	CTAG	8 cut(s)	230, 374, 947, 1043, 1175, 1215, 1292, 1721
GlaI	GCGC	1 cut(s)	507
GluI	GCNGC	7 cut(s)	270, 308, 610, 1212, 1278, 1634, 1737
GsaI	CCCAGC	3 cut(s)	190, 341, 566
GsuI	CTGGAG	3 cut(s)	936, 1023, 1517
HaeIII	GGCC	4 cut(s)	228, 638, 786, 1329
HapII	CCGG	2 cut(s)	1054, 1699
HgaI	GACGC	2 cut(s)	391, 1728
HhaI	GCGC	1 cut(s)	508
Hin1I	GRCGYC	1 cut(s)	402
Hin6I	GCGC	1 cut(s)	506
HinP1I	GCGC	1 cut(s)	506
HindIII	AAGCTT	1 cut(s)	362
HinfI	GANTC	9 cut(s)	167, 413, 756, 978, 1007, 1152, 1355, 1452, 1895
HpaII	CCGG	2 cut(s)	1054, 1699
HphI	GGTGA	6 cut(s)	663, 727, 1331, 1555, 1637, 1664
Hpy166II	GTNNAC	6 cut(s)	175, 332, 545, 934, 1051, 1111
Hpy188I	TCNGA	8 cut(s)	211, 587, 798, 848, 1432, 1521, 1614, 1690
Hpy188III	TCNNGA	7 cut(s)	255, 374, 630, 815, 1465, 1496, 1699
Hpy8I	GTNNAC	6 cut(s)	175, 332, 545, 934, 1051, 1111
Hpy99I	CGWCG	2 cut(s)	407, 1718
HpyAV	CCTTC	6 cut(s)	614, 742, 775, 1150, 1267, 1703
HpyCH4III	ACNGT	5 cut(s)	1387, 1513, 1552, 1790, 1811
HpyCH4IV	ACGT	1 cut(s)	1269
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1208, 1845, 1854
HpyF3I	CTNAG	6 cut(s)	210, 446, 539, 835, 845, 1148
HpySE526I	ACGT	1 cut(s)	1269
Hsp92I	GRCGYC	1 cut(s)	402
HspAI	GCGC	1 cut(s)	506
KflI	GGGWCCC	1 cut(s)	1919
Kpn2I	TCCGGA	1 cut(s)	1698
Ksp22I	TGATCA	1 cut(s)	195
Kzo9I	GATC	6 cut(s)	133, 195, 376, 632, 1246, 1609
LguI	GCTCTTC	1 cut(s)	113
Lsp1109I	GCAGC	6 cut(s)	294, 621, 1198, 1264, 1620, 1748
LweI	GCATC	3 cut(s)	614, 1692, 1832
MaeI	CTAG	8 cut(s)	230, 374, 947, 1043, 1175, 1215, 1292, 1721
MaeII	ACGT	1 cut(s)	1269
MaeIII	GTNAC	7 cut(s)	657, 806, 988, 1008, 1153, 1363, 1740
MalI	GATC	6 cut(s)	135, 197, 378, 634, 1248, 1611
MboI	GATC	6 cut(s)	133, 195, 376, 632, 1246, 1609
MfeI	CAATTG	3 cut(s)	702, 1203, 1311
MflI	RGATCY	1 cut(s)	376
MhlI	GDGCHC	9 cut(s)	125, 238, 348, 1053, 1187, 1290, 1476, 1495, 1578
MluCI	AATT	9 cut(s)	557, 702, 1013, 1025, 1057, 1071, 1203, 1311, 1603
MlyI	GAGTC	5 cut(s)	161, 407, 972, 1016, 1161
MmeI	TCCRAC	3 cut(s)	565, 1668, 1785
Mph1103I	ATGCAT	1 cut(s)	1825
MroI	TCCGGA	1 cut(s)	1698
MseI	TTAA	4 cut(s)	149, 263, 1070, 1515
MslI	CAYNNNNRTG	1 cut(s)	1862
MspA1I	CMGCKG	2 cut(s)	341, 1001
MspI	CCGG	2 cut(s)	1054, 1699
MspR9I	CCNGG	1 cut(s)	675
MunI	CAATTG	3 cut(s)	702, 1203, 1311
Mva1269I	GAATGC	3 cut(s)	1458, 1825, 1885
MvaI	CCWGG	1 cut(s)	675
MwoI	GCNNNNNNNGC	3 cut(s)	1208, 1845, 1854
NcoI	CCATGG	1 cut(s)	1905
NdeII	GATC	6 cut(s)	133, 195, 376, 632, 1246, 1609
NlaIV	GGNNCC	4 cut(s)	639, 1528, 1920, 1921
NmuCI	GTSAC	6 cut(s)	657, 806, 1008, 1153, 1363, 1740
NsiI	ATGCAT	1 cut(s)	1825
NspI	RCATGY	2 cut(s)	1123, 1852
PceI	AGGCCT	1 cut(s)	228
PciI	ACATGT	1 cut(s)	1119
PciSI	GCTCTTC	1 cut(s)	113
PctI	GAATGC	3 cut(s)	1458, 1825, 1885
PfeI	GAWTC	4 cut(s)	756, 1355, 1452, 1895
PflMI	CCANNNNNTGG	2 cut(s)	97, 674
PkrI	GCNGC	7 cut(s)	271, 309, 611, 1213, 1279, 1635, 1738
Ple19I	CGATCG	1 cut(s)	1612
PleI	GAGTC	5 cut(s)	161, 407, 972, 1015, 1160
PpsI	GAGTC	5 cut(s)	161, 407, 972, 1015, 1160
PpuMI	RGGWCCY	1 cut(s)	1919
PscI	ACATGT	1 cut(s)	1119
PsiI	TTATAA	1 cut(s)	531
Psp124BI	GAGCTC	5 cut(s)	238, 348, 1476, 1495, 1578
Psp5II	RGGWCCY	1 cut(s)	1919
Psp6I	CCWGG	1 cut(s)	673
PspFI	CCCAGC	3 cut(s)	186, 337, 562
PspGI	CCWGG	1 cut(s)	673
PspN4I	GGNNCC	4 cut(s)	639, 1528, 1920, 1921
PspPI	GGNCC	7 cut(s)	545, 637, 784, 883, 1696, 1768, 1919
PspPPI	RGGWCCY	1 cut(s)	1919
PstI	CTGCAG	1 cut(s)	312
PstNI	CAGNNNCTG	1 cut(s)	250
PsuI	RGATCY	1 cut(s)	376
PvuI	CGATCG	1 cut(s)	1612
PvuII	CAGCTG	1 cut(s)	1001
RsaI	GTAC	6 cut(s)	352, 767, 935, 1112, 1554, 1813
RsaNI	GTAC	6 cut(s)	351, 766, 934, 1111, 1553, 1812
RseI	CAYNNNNRTG	1 cut(s)	1862
SacI	GAGCTC	5 cut(s)	238, 348, 1476, 1495, 1578
SapI	GCTCTTC	1 cut(s)	113
SaqAI	TTAA	4 cut(s)	149, 263, 1070, 1515
SatI	GCNGC	7 cut(s)	270, 308, 610, 1212, 1278, 1634, 1737
Sau3AI	GATC	6 cut(s)	133, 195, 376, 632, 1246, 1609
Sau96I	GGNCC	7 cut(s)	545, 637, 784, 883, 1696, 1768, 1919
ScaI	AGTACT	1 cut(s)	1813
SchI	GAGTC	5 cut(s)	161, 407, 972, 1016, 1161
ScrFI	CCNGG	1 cut(s)	675
SduI	GDGCHC	9 cut(s)	125, 238, 348, 1053, 1187, 1290, 1476, 1495, 1578
SfaNI	GCATC	3 cut(s)	614, 1692, 1832
SfcI	CTRYAG	3 cut(s)	171, 273, 308
SinI	GGWCC	5 cut(s)	545, 883, 1696, 1768, 1919
SmiMI	CAYNNNNRTG	1 cut(s)	1862
SmlI	CTYRAG	2 cut(s)	980, 1535
SmoI	CTYRAG	2 cut(s)	980, 1535
Sse9I	AATT	9 cut(s)	557, 702, 1013, 1025, 1057, 1071, 1203, 1311, 1603
SseBI	AGGCCT	1 cut(s)	228
SsiI	CCGC	4 cut(s)	269, 341, 1675, 1724
SspMI	CTAG	8 cut(s)	230, 374, 947, 1043, 1175, 1215, 1292, 1721
SstI	GAGCTC	5 cut(s)	238, 348, 1476, 1495, 1578
StuI	AGGCCT	1 cut(s)	228
StyD4I	CCNGG	1 cut(s)	673
StyI	CCWWGG	3 cut(s)	229, 1890, 1905
TaaI	ACNGT	5 cut(s)	1387, 1513, 1552, 1790, 1811
TaiI	ACGT	1 cut(s)	1272
TaqI	TCGA	3 cut(s)	295, 1344, 1826
TasI	AATT	9 cut(s)	557, 702, 1013, 1025, 1057, 1071, 1203, 1311, 1603
TatI	WGTACW	3 cut(s)	933, 1552, 1811
TauI	GCSGC	1 cut(s)	272
TfiI	GAWTC	4 cut(s)	756, 1355, 1452, 1895
Tru1I	TTAA	4 cut(s)	149, 263, 1070, 1515
Tru9I	TTAA	4 cut(s)	149, 263, 1070, 1515
TscAI	CASTG	7 cut(s)	600, 811, 975, 1053, 1138, 1375, 1846
TseFI	GTSAC	6 cut(s)	657, 806, 1008, 1153, 1363, 1740
TseI	GCWGC	6 cut(s)	307, 609, 1211, 1277, 1633, 1736
Tsp45I	GTSAC	6 cut(s)	657, 806, 1008, 1153, 1363, 1740
TspDTI	ATGAA	2 cut(s)	93, 108
TspGWI	ACGGA	3 cut(s)	896, 1367, 1731
TspRI	CASTG	7 cut(s)	600, 811, 975, 1053, 1138, 1375, 1846
Van91I	CCANNNNNTGG	2 cut(s)	97, 674
VneI	GTGCAC	1 cut(s)	1049
VpaK11BI	GGWCC	5 cut(s)	545, 883, 1696, 1768, 1919
XapI	RAATTY	2 cut(s)	557, 1057
XbaI	TCTAGA	1 cut(s)	373
XceI	RCATGY	2 cut(s)	1123, 1852
XcmI	CCANNNNNNNNNTGG	3 cut(s)	251, 904, 1176
XmaJI	CCTAGG	1 cut(s)	229
XmiI	GTMKAC	1 cut(s)	174
XspI	CTAG	8 cut(s)	230, 374, 947, 1043, 1175, 1215, 1292, 1721
ZrmI	AGTACT	1 cut(s)	1813
Zsp2I	ATGCAT	1 cut(s)	1825

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.