Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0014140

Physical Location & Seq

Genomic Coordinates Reverse (-)

28303472 .. 28307796

Gene Structure 4325 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG130600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1980 bp

ATGTTCTTCTGTGTTGGGTTTTCTCTGAATTCTCTTCTTCATTCTCCATTAGTCCATAACACCATGATTACCAACCTCTTTGCTTTCTTCTTCTTCTTCCTCTCCTCTGCTTCGTTCTGTCTCTCCTATGAACCTCGCAACCATGAAGTGGTGGCTTTGATAAACTTGAAGAGCACTTTGAATGATCCTCATGGGGTTTTAACCAACTGGGATGGAGACTCTGTAGACCCATGTAGCTGGGCTATGATCACTTGCTCATCTGAGAATGTTGTTGTAGGCCTAGGAGCTCCAAGCCAGTCTCTCTCTGGAACTTTAACTGCGGCTATAGGAAATCTCACAAATCTTCGACAAGTGTTGCTGCAGAACAACAATATATCAGGTAAACTCCCAGCGGAGCTCGGTACTCTTCCCAAGCTTCAAACTCTAGATCTCTCCAATAATCGGTTCTCTGGAGTCGTCCCAGACTCCCTGGGTCAGTTGAGTAGTCTGCAATACCTGAGGCTGAACAACAATAGCTTGTCTGGGGTTTTCCCTGTGTCTTTAGCCAAAATCCCTGCGCTTGCTTTCTTGGACTTGTCTTATAACAATCTTAGTGGACCAATACCCAAATTCCCAGCCAGAACTTTCAATGTTGTCGGAAACCCACTGATTTGTGGAAGCAGCTCCACAGAAGGATGCTCTGGATCAGCCCCTGTCCCTCTTTCGTTATCACTAAAACCATCACCTGGAAAAAACAAGTCCAAGATAGTAGCAATTGCACTTGGGGTGAGCTTCAGTTGTGCCTTTCTCATGCTCCTATCACTTGGAATCCTCTGGTACAGAAAGAAGCAGAAGAGCCAAACCATTCTGAACATCAGTGACATTCAAGAAGAGGGACTTGTGAGCTTAGGCAACCTCAGAAACTTCACTTTCAAAGAGCTTCAAGTTGCCACGGACCATTTTAGCTCCAAGAACATACTGGGTGCTGGAGGTTTTGGGAATGTGTACAAGGGAAAGCTAGGGGATGGGACTATGGTGGCAGTGAAACGACTCAAGGATGTAACAGGAACAGCTGGAGAGTCACAATTTAGGACAGAATTAGAGATGATAAGCCTAGCAGTGCACCGGAATTTGCTTCGTTTAATTGGATATTGTGCTACTTCTAATGAGAGGCTTCTGGTGTACCCGTACATGTCCAATGGCAGTGTCGCCTTCAGGCTTAGAGTCACAACAGGAAAGCCAGCACTAGATTGGAACACAAGGAAGAGAATAGCAATTGGAGCTGCTAGAGGTCTTCTGTATCTACATGAGCAATGTGATCCAAAGATTATACACAGAGACGTGAAGGCTGCAAATGTGCTCCTAGATGACTACTGCGAGGCAATTGTTGGTGATTTTGGCCTTGCAAAGCTCCTCGACCATGCTGATTCTCATGTGACCACTGCTGTCCGTGGGACTGTTGGGCATATTGCACCAGAATACCTTTCTACTGGTCAATCATCTGAAAAAACTGATGTTTTTGGATTTGGCATTCTCTTGATAGAGCTCATAACTGGGATGAGAGCTCTGGAGTTTGGCAAAACAGTTAATCAGAAAGGAGCCATGCTTGAGTGGGTGAAGACAGTACAACAAGAAAAGAAAGTGGAGCTCTTGGTGGATAGAGAACTGGGGAACAATTACGATCGGATTGAGGTTGGTGAAATGCTGCAAGTGGCTTTGCTATGCACTCAATACCTACCAGCTCACCGCCCCAAGATGTCGGAAGTGGTCCGGATGCTTGAAGGTGATGGACTAGCGGAGAAGTGGGCAGCGTCACATAATCAAAGTAAATCCAACATTGACCTCTTCCATACTCACAACAGTAGCAAAAGCACTCCCCACAGTACTTGGAATGCATCCAAACATGATGGCAGTGAACGCATGTTTGGCACATCTATGGATGAGGATGATGATGAGCATTCCTTGGATTCCTATGCCATGGAACTCTCTGGTCCCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004713 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009987 GO:0010150 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018108 GO:0018193 GO:0018212 GO:0019199 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0090693 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

659

Amino Acids

71.9

Weight (kDa)

7.01

Isoelectric Point (pI)

33.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	47 - 86	5.6e-13	Leucine rich repeat N-terminal domain
LRR_14	PF23598	106 - 191	6.4e-10	Leucine-rich repeat region
LRR_4	PF12799	113 - 148	9.3e-07	Leucine Rich repeats (2 copies)
LRR_8	PF13855	137 - 197	1.5e-13	Leucine rich repeat
Pkinase	PF00069	315 - 582	7.7e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	317 - 586	7.9e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014140)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23950 AT4G30520
fragaria_vesca	FvH4_4g08870 FvH4_4g08870
malus_domestica	MD16G1259200.v1.1
prunus_persica	Prupe.1G100800_v2.0.a1
pyrus_communis	pycom16g22670
rosa_chinensis	RchiOBHm_Chr4g0405301
rosa_laevigata	RLG00000008859
rosa_multiflora	Rmu_sc0000161.1_g000017
rosa_roxburghii	Rroxscaffold_5G00349670
rosa_rugosa	Rorug04G0057100 Rorug04G0057200
rosa_samantha	Rh4AG130600 Rh4CG137500 Rh4DG124000
rosa_wichuraiana	Rw4G010570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	582
AccB7I	CCANNNNNTGG	2 cut(s)	148, 725
AccI	GTMKAC	1 cut(s)	225
AccIII	TCCGGA	1 cut(s)	1749
AciI	CCGC	4 cut(s)	320, 392, 1726, 1775
AclWI	GGATC	3 cut(s)	179, 691, 1292
AcsI	RAATTY	3 cut(s)	28, 608, 1108
AcuI	CTGAAG	2 cut(s)	757, 1177
AfaI	GTAC	7 cut(s)	403, 818, 986, 1163, 1169, 1605, 1864
AfiI	CCNNNNNNNGG	3 cut(s)	148, 441, 725
AflIII	ACRYGT	1 cut(s)	1170
AgsI	TTSAA	8 cut(s)	169, 181, 419, 628, 866, 913, 923, 1760
AjiI	CACGTC	1 cut(s)	1321
AjnI	CCWGG	2 cut(s)	468, 724
AjuI	GAANNNNNNNTTGG	4 cut(s)	428, 460, 1887, 1919
Alw21I	GWGCWC	8 cut(s)	176, 289, 399, 1104, 1341, 1527, 1546, 1629
Alw26I	GTCTC	4 cut(s)	125, 210, 303, 1311
Alw44I	GTGCAC	1 cut(s)	1100
AlwI	GGATC	3 cut(s)	179, 691, 1292
AlwNI	CAGNNNCTG	1 cut(s)	692
Aor13HI	TCCGGA	1 cut(s)	1749
AoxI	GGCC	2 cut(s)	277, 1378
ApaLI	GTGCAC	1 cut(s)	1100
ApeKI	GCWGC	6 cut(s)	358, 660, 1262, 1328, 1684, 1787
ApoI	RAATTY	3 cut(s)	28, 608, 1108
AspA2I	CCTAGG	1 cut(s)	280
AspLEI	GCGC	1 cut(s)	559
AspS9I	GGNCC	4 cut(s)	596, 934, 1747, 1970
AsuHPI	GGTGA	7 cut(s)	714, 778, 1382, 1606, 1688, 1715, 1775
AvaII	GGWCC	4 cut(s)	596, 934, 1747, 1970
AvrII	CCTAGG	1 cut(s)	280
AxyI	CCTNAGG	1 cut(s)	497
BaeGI	GKGCMC	1 cut(s)	1104
BanII	GRGCYC	5 cut(s)	289, 399, 1527, 1546, 1629
BbsI	GAAGAC	2 cut(s)	1265, 1604
Bbv12I	GWGCWC	8 cut(s)	176, 289, 399, 1104, 1341, 1527, 1546, 1629
BbvI	GCAGC	6 cut(s)	345, 672, 1249, 1315, 1671, 1799
BccI	CCATC	5 cut(s)	206, 727, 998, 1760, 1880
BciT130I	CCWGG	2 cut(s)	470, 726
BclI	TGATCA	1 cut(s)	246
BcoDI	GTCTC	4 cut(s)	125, 210, 303, 1311
BfaI	CTAG	8 cut(s)	281, 425, 998, 1094, 1226, 1266, 1343, 1772
BfmI	CTRYAG	3 cut(s)	222, 324, 359
BglII	AGATCT	1 cut(s)	427
BisI	GCNGC	7 cut(s)	321, 359, 661, 1263, 1329, 1685, 1788
BlnI	CCTAGG	1 cut(s)	280
BlsI	GCNGC	7 cut(s)	322, 360, 662, 1264, 1330, 1686, 1789
BmcAI	AGTACT	1 cut(s)	1864
Bme1390I	CCNGG	2 cut(s)	470, 726
Bme18I	GGWCC	4 cut(s)	596, 934, 1747, 1970
BmgBI	CACGTC	1 cut(s)	1321
BmgT120I	GGNCC	4 cut(s)	596, 934, 1747, 1970
BmiI	GGNNCC	2 cut(s)	1579, 1972
BmrFI	CCNGG	2 cut(s)	470, 726
BmrI	ACTGGG	4 cut(s)	217, 968, 1542, 1655
BmsI	GCATC	3 cut(s)	665, 1743, 1883
BmuI	ACTGGG	4 cut(s)	217, 968, 1542, 1655
BpiI	GAAGAC	2 cut(s)	1265, 1604
BpmI	CTGGAG	4 cut(s)	471, 987, 1074, 1568
Bpu10I	CCTNAGC	1 cut(s)	886
BpuEI	CTTGAG	2 cut(s)	1016, 1607
BsaJI	CCNNGG	7 cut(s)	280, 468, 469, 930, 1429, 1941, 1956
BsaWI	WCCGGW	2 cut(s)	1104, 1749
BsaXI	ACNNNNNCTCC	2 cut(s)	207, 237
Bsc4I	CCNNNNNNNGG	3 cut(s)	148, 441, 725
Bse1I	ACTGG	6 cut(s)	212, 295, 963, 1474, 1537, 1650
Bse21I	CCTNAGG	1 cut(s)	497
Bse3DI	GCAATG	1 cut(s)	1298
BseAI	TCCGGA	1 cut(s)	1749
BseBI	CCWGG	2 cut(s)	470, 726
BseDI	CCNNGG	7 cut(s)	280, 468, 469, 930, 1429, 1941, 1956
BseGI	GGATG	9 cut(s)	217, 680, 1009, 1042, 1542, 1758, 1874, 1924, 1930
BseLI	CCNNNNNNNGG	3 cut(s)	148, 441, 725
BseMI	GCAATG	1 cut(s)	1298
BseMII	CTCAG	3 cut(s)	252, 488, 910
BseNI	ACTGG	6 cut(s)	212, 295, 963, 1474, 1537, 1650
BseRI	GAGGAG	2 cut(s)	94, 1382
BseSI	GKGCMC	1 cut(s)	1104
BseXI	GCAGC	6 cut(s)	345, 672, 1249, 1315, 1671, 1799
BseYI	CCCAGC	3 cut(s)	237, 388, 613
Bsh1285I	CGRYCG	1 cut(s)	1663
BshFI	GGCC	2 cut(s)	279, 1380
BsiEI	CGRYCG	1 cut(s)	1663
BsiHKAI	GWGCWC	8 cut(s)	176, 289, 399, 1104, 1341, 1527, 1546, 1629
BsiSI	CCGG	2 cut(s)	1105, 1750
BslFI	GGGAC	6 cut(s)	443, 680, 888, 1021, 1447, 1956
BslI	CCNNNNNNNGG	3 cut(s)	148, 441, 725
BsmAI	GTCTC	4 cut(s)	125, 210, 303, 1311
BsmBI	CGTCTC	1 cut(s)	1311
BsmFI	GGGAC	6 cut(s)	443, 680, 888, 1021, 1447, 1956
BsmI	GAATGC	3 cut(s)	1509, 1876, 1936
BsnI	GGCC	2 cut(s)	279, 1380
Bsp1286I	GDGCHC	8 cut(s)	176, 289, 399, 1104, 1341, 1527, 1546, 1629
Bsp13I	TCCGGA	1 cut(s)	1749
Bsp1407I	TGTACA	1 cut(s)	984
Bsp143I	GATC	6 cut(s)	184, 246, 427, 683, 1297, 1660
Bsp19I	CCATGG	1 cut(s)	1956
BspACI	CCGC	4 cut(s)	320, 392, 1726, 1775
BspANI	GGCC	2 cut(s)	279, 1380
BspCNI	CTCAG	3 cut(s)	253, 489, 909
BspEI	TCCGGA	1 cut(s)	1749
BspLI	GGNNCC	2 cut(s)	1579, 1972
BspMAI	CTGCAG	1 cut(s)	363
BspPI	GGATC	3 cut(s)	179, 691, 1292
BspQI	GCTCTTC	2 cut(s)	164, 827
BsrDI	GCAATG	1 cut(s)	1298
BsrGI	TGTACA	1 cut(s)	984
BsrI	ACTGG	6 cut(s)	212, 295, 963, 1474, 1537, 1650
BssECI	CCNNGG	7 cut(s)	280, 468, 469, 930, 1429, 1941, 1956
BssMI	GATC	6 cut(s)	184, 246, 427, 683, 1297, 1660
BssT1I	CCWWGG	3 cut(s)	280, 1941, 1956
Bst2UI	CCWGG	2 cut(s)	470, 726
Bst4CI	ACNGT	5 cut(s)	1438, 1564, 1603, 1841, 1862
Bst6I	CTCTTC	7 cut(s)	39, 164, 411, 827, 864, 1238, 1829
BstAUI	TGTACA	1 cut(s)	984
BstC8I	GCNNGC	2 cut(s)	561, 1221
BstDEI	CTNAG	6 cut(s)	261, 497, 590, 886, 896, 1199
BstDSI	CCRYGG	3 cut(s)	930, 1429, 1956
BstF5I	GGATG	9 cut(s)	217, 680, 1009, 1042, 1542, 1758, 1874, 1924, 1930
BstHHI	GCGC	1 cut(s)	559
BstKTI	GATC	6 cut(s)	187, 249, 430, 686, 1300, 1663
BstMAI	GTCTC	4 cut(s)	125, 210, 303, 1311
BstMBI	GATC	6 cut(s)	184, 246, 427, 683, 1297, 1660
BstMCI	CGRYCG	1 cut(s)	1663
BstMWI	GCNNNNNNNGC	3 cut(s)	1259, 1896, 1905
BstNI	CCWGG	2 cut(s)	470, 726
BstNSI	RCATGY	2 cut(s)	1174, 1903
BstSCI	CCNGG	2 cut(s)	468, 724
BstSFI	CTRYAG	3 cut(s)	222, 324, 359
BstSLI	GKGCMC	1 cut(s)	1104
BstV1I	GCAGC	6 cut(s)	345, 672, 1249, 1315, 1671, 1799
BstV2I	GAAGAC	2 cut(s)	1265, 1604
BstX2I	RGATCY	1 cut(s)	427
BstXI	CCANNNNNNTGG	1 cut(s)	237
BstYI	RGATCY	1 cut(s)	427
Bsu36I	CCTNAGG	1 cut(s)	497
BsuRI	GGCC	2 cut(s)	279, 1380
BtgI	CCRYGG	3 cut(s)	930, 1429, 1956
BtrI	CACGTC	1 cut(s)	1321
BtsCI	GGATG	9 cut(s)	217, 680, 1009, 1042, 1542, 1758, 1874, 1924, 1930
BtsI	GCAGTG	5 cut(s)	1026, 1104, 1189, 1419, 1897
BtsIMutI	CAGTG	7 cut(s)	644, 862, 1026, 1104, 1189, 1419, 1897
Cac8I	GCNNGC	2 cut(s)	561, 1221
CaiI	CAGNNNCTG	1 cut(s)	692
CfoI	GCGC	1 cut(s)	559
Cfr13I	GGNCC	4 cut(s)	596, 934, 1747, 1970
CseI	GACGC	1 cut(s)	1779
Csp6I	GTAC	7 cut(s)	402, 817, 985, 1162, 1168, 1604, 1863
CspCI	CAANNNNNGTGG	4 cut(s)	574, 609, 1847, 1882
CviQI	GTAC	7 cut(s)	402, 817, 985, 1162, 1168, 1604, 1863
DdeI	CTNAG	6 cut(s)	261, 497, 590, 886, 896, 1199
DpnI	GATC	6 cut(s)	186, 248, 429, 685, 1299, 1662
DpnII	GATC	6 cut(s)	184, 246, 427, 683, 1297, 1660
Eam1104I	CTCTTC	7 cut(s)	39, 164, 411, 827, 864, 1238, 1829
EarI	CTCTTC	7 cut(s)	39, 164, 411, 827, 864, 1238, 1829
Ecl136II	GAGCTC	5 cut(s)	287, 397, 1525, 1544, 1627
Eco130I	CCWWGG	3 cut(s)	280, 1941, 1956
Eco147I	AGGCCT	1 cut(s)	279
Eco24I	GRGCYC	5 cut(s)	289, 399, 1527, 1546, 1629
Eco47I	GGWCC	4 cut(s)	596, 934, 1747, 1970
Eco53kI	GAGCTC	5 cut(s)	287, 397, 1525, 1544, 1627
Eco57I	CTGAAG	2 cut(s)	757, 1177
Eco81I	CCTNAGG	1 cut(s)	497
EcoICRI	GAGCTC	5 cut(s)	287, 397, 1525, 1544, 1627
EcoRI	GAATTC	1 cut(s)	28
EcoRII	CCWGG	2 cut(s)	468, 724
EcoT14I	CCWWGG	3 cut(s)	280, 1941, 1956
EcoT22I	ATGCAT	1 cut(s)	1876
EcoT38I	GRGCYC	5 cut(s)	289, 399, 1527, 1546, 1629
ErhI	CCWWGG	3 cut(s)	280, 1941, 1956
Esp3I	CGTCTC	1 cut(s)	1311
FalI	AAGNNNNNCTT	2 cut(s)	861, 893
FaqI	GGGAC	6 cut(s)	443, 680, 888, 1021, 1447, 1956
FbaI	TGATCA	1 cut(s)	246
FblI	GTMKAC	1 cut(s)	225
Fnu4HI	GCNGC	7 cut(s)	321, 359, 661, 1263, 1329, 1685, 1788
FokI	GGATG	9 cut(s)	224, 687, 1016, 1049, 1549, 1765, 1861, 1931, 1937
FriOI	GRGCYC	5 cut(s)	289, 399, 1527, 1546, 1629
Fsp4HI	GCNGC	7 cut(s)	321, 359, 661, 1263, 1329, 1685, 1788
FspBI	CTAG	8 cut(s)	281, 425, 998, 1094, 1226, 1266, 1343, 1772
GlaI	GCGC	1 cut(s)	558
GluI	GCNGC	7 cut(s)	321, 359, 661, 1263, 1329, 1685, 1788
GsaI	CCCAGC	3 cut(s)	241, 392, 617
GsuI	CTGGAG	4 cut(s)	471, 987, 1074, 1568
HaeIII	GGCC	2 cut(s)	279, 1380
HapII	CCGG	2 cut(s)	1105, 1750
HgaI	GACGC	1 cut(s)	1779
HhaI	GCGC	1 cut(s)	559
Hin6I	GCGC	1 cut(s)	557
HinP1I	GCGC	1 cut(s)	557
HindIII	AAGCTT	1 cut(s)	413
HinfI	GANTC	9 cut(s)	218, 453, 464, 807, 1029, 1058, 1203, 1406, 1946
HpaII	CCGG	2 cut(s)	1105, 1750
HphI	GGTGA	7 cut(s)	714, 778, 1382, 1606, 1688, 1715, 1775
Hpy166II	GTNNAC	7 cut(s)	226, 383, 596, 985, 1102, 1162, 1895
Hpy188I	TCNGA	9 cut(s)	27, 262, 638, 849, 899, 1483, 1572, 1665, 1741
Hpy188III	TCNNGA	8 cut(s)	306, 425, 450, 681, 866, 1516, 1547, 1750
Hpy8I	GTNNAC	7 cut(s)	226, 383, 596, 985, 1102, 1162, 1895
HpyAV	CCTTC	4 cut(s)	665, 1201, 1318, 1754
HpyCH4III	ACNGT	5 cut(s)	1438, 1564, 1603, 1841, 1862
HpyCH4IV	ACGT	1 cut(s)	1320
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1259, 1896, 1905
HpyF3I	CTNAG	6 cut(s)	261, 497, 590, 886, 896, 1199
HpySE526I	ACGT	1 cut(s)	1320
HspAI	GCGC	1 cut(s)	557
Kpn2I	TCCGGA	1 cut(s)	1749
Ksp22I	TGATCA	1 cut(s)	246
Kzo9I	GATC	6 cut(s)	184, 246, 427, 683, 1297, 1660
LguI	GCTCTTC	2 cut(s)	164, 827
Lsp1109I	GCAGC	6 cut(s)	345, 672, 1249, 1315, 1671, 1799
LweI	GCATC	3 cut(s)	665, 1743, 1883
MaeI	CTAG	8 cut(s)	281, 425, 998, 1094, 1226, 1266, 1343, 1772
MaeII	ACGT	1 cut(s)	1320
MaeIII	GTNAC	6 cut(s)	857, 1039, 1059, 1204, 1414, 1791
MalI	GATC	6 cut(s)	186, 248, 429, 685, 1299, 1662
MboI	GATC	6 cut(s)	184, 246, 427, 683, 1297, 1660
MfeI	CAATTG	3 cut(s)	753, 1254, 1362
MflI	RGATCY	1 cut(s)	427
MhlI	GDGCHC	8 cut(s)	176, 289, 399, 1104, 1341, 1527, 1546, 1629
MlyI	GAGTC	6 cut(s)	212, 458, 462, 1023, 1067, 1212
MmeI	TCCRAC	3 cut(s)	616, 1719, 1836
Mph1103I	ATGCAT	1 cut(s)	1876
MroI	TCCGGA	1 cut(s)	1749
MseI	TTAA	4 cut(s)	200, 314, 1121, 1566
MslI	CAYNNNNRTG	1 cut(s)	1913
MspA1I	CMGCKG	2 cut(s)	392, 1052
MspI	CCGG	2 cut(s)	1105, 1750
MspR9I	CCNGG	2 cut(s)	470, 726
MunI	CAATTG	3 cut(s)	753, 1254, 1362
Mva1269I	GAATGC	3 cut(s)	1509, 1876, 1936
MvaI	CCWGG	2 cut(s)	470, 726
MwoI	GCNNNNNNNGC	3 cut(s)	1259, 1896, 1905
NcoI	CCATGG	1 cut(s)	1956
NdeII	GATC	6 cut(s)	184, 246, 427, 683, 1297, 1660
NlaIV	GGNNCC	2 cut(s)	1579, 1972
NmuCI	GTSAC	5 cut(s)	857, 1059, 1204, 1414, 1791
NsiI	ATGCAT	1 cut(s)	1876
NspI	RCATGY	2 cut(s)	1174, 1903
PasI	CCCWGGG	1 cut(s)	469
PceI	AGGCCT	1 cut(s)	279
PciI	ACATGT	1 cut(s)	1170
PciSI	GCTCTTC	2 cut(s)	164, 827
PctI	GAATGC	3 cut(s)	1509, 1876, 1936
PfeI	GAWTC	3 cut(s)	807, 1406, 1946
PflMI	CCANNNNNTGG	2 cut(s)	148, 725
PkrI	GCNGC	7 cut(s)	322, 360, 662, 1264, 1330, 1686, 1789
Ple19I	CGATCG	1 cut(s)	1663
PleI	GAGTC	6 cut(s)	212, 458, 461, 1023, 1066, 1211
PpsI	GAGTC	6 cut(s)	212, 458, 461, 1023, 1066, 1211
PscI	ACATGT	1 cut(s)	1170
PsiI	TTATAA	1 cut(s)	582
Psp124BI	GAGCTC	5 cut(s)	289, 399, 1527, 1546, 1629
Psp6I	CCWGG	2 cut(s)	468, 724
PspFI	CCCAGC	3 cut(s)	237, 388, 613
PspGI	CCWGG	2 cut(s)	468, 724
PspN4I	GGNNCC	2 cut(s)	1579, 1972
PspPI	GGNCC	4 cut(s)	596, 934, 1747, 1970
PstI	CTGCAG	1 cut(s)	363
PstNI	CAGNNNCTG	1 cut(s)	692
PsuI	RGATCY	1 cut(s)	427
PvuI	CGATCG	1 cut(s)	1663
PvuII	CAGCTG	1 cut(s)	1052
RsaI	GTAC	7 cut(s)	403, 818, 986, 1163, 1169, 1605, 1864
RsaNI	GTAC	7 cut(s)	402, 817, 985, 1162, 1168, 1604, 1863
RseI	CAYNNNNRTG	1 cut(s)	1913
SacI	GAGCTC	5 cut(s)	289, 399, 1527, 1546, 1629
SapI	GCTCTTC	2 cut(s)	164, 827
SaqAI	TTAA	4 cut(s)	200, 314, 1121, 1566
SatI	GCNGC	7 cut(s)	321, 359, 661, 1263, 1329, 1685, 1788
Sau3AI	GATC	6 cut(s)	184, 246, 427, 683, 1297, 1660
Sau96I	GGNCC	4 cut(s)	596, 934, 1747, 1970
ScaI	AGTACT	1 cut(s)	1864
SchI	GAGTC	6 cut(s)	212, 458, 462, 1023, 1067, 1212
ScrFI	CCNGG	2 cut(s)	470, 726
SduI	GDGCHC	8 cut(s)	176, 289, 399, 1104, 1341, 1527, 1546, 1629
SfaNI	GCATC	3 cut(s)	665, 1743, 1883
SfcI	CTRYAG	3 cut(s)	222, 324, 359
SinI	GGWCC	4 cut(s)	596, 934, 1747, 1970
SmiMI	CAYNNNNRTG	1 cut(s)	1913
SmlI	CTYRAG	2 cut(s)	1031, 1586
SmoI	CTYRAG	2 cut(s)	1031, 1586
SseBI	AGGCCT	1 cut(s)	279
SsiI	CCGC	4 cut(s)	320, 392, 1726, 1775
SspMI	CTAG	8 cut(s)	281, 425, 998, 1094, 1226, 1266, 1343, 1772
SstI	GAGCTC	5 cut(s)	289, 399, 1527, 1546, 1629
StuI	AGGCCT	1 cut(s)	279
StyD4I	CCNGG	2 cut(s)	468, 724
StyI	CCWWGG	3 cut(s)	280, 1941, 1956
TaaI	ACNGT	5 cut(s)	1438, 1564, 1603, 1841, 1862
TaiI	ACGT	1 cut(s)	1323
TaqI	TCGA	2 cut(s)	346, 1395
TatI	WGTACW	3 cut(s)	984, 1603, 1862
TauI	GCSGC	1 cut(s)	323
TfiI	GAWTC	3 cut(s)	807, 1406, 1946
Tru1I	TTAA	4 cut(s)	200, 314, 1121, 1566
Tru9I	TTAA	4 cut(s)	200, 314, 1121, 1566
TscAI	CASTG	7 cut(s)	651, 862, 1026, 1104, 1189, 1426, 1897
TseFI	GTSAC	5 cut(s)	857, 1059, 1204, 1414, 1791
TseI	GCWGC	6 cut(s)	358, 660, 1262, 1328, 1684, 1787
Tsp45I	GTSAC	5 cut(s)	857, 1059, 1204, 1414, 1791
TspDTI	ATGAA	3 cut(s)	29, 144, 159
TspGWI	ACGGA	2 cut(s)	947, 1418
TspRI	CASTG	7 cut(s)	651, 862, 1026, 1104, 1189, 1426, 1897
Van91I	CCANNNNNTGG	2 cut(s)	148, 725
VneI	GTGCAC	1 cut(s)	1100
VpaK11BI	GGWCC	4 cut(s)	596, 934, 1747, 1970
XapI	RAATTY	3 cut(s)	28, 608, 1108
XbaI	TCTAGA	1 cut(s)	424
XceI	RCATGY	2 cut(s)	1174, 1903
XcmI	CCANNNNNNNNNTGG	3 cut(s)	302, 955, 1227
XmaJI	CCTAGG	1 cut(s)	280
XmiI	GTMKAC	1 cut(s)	225
XspI	CTAG	8 cut(s)	281, 425, 998, 1094, 1226, 1266, 1343, 1772
ZrmI	AGTACT	1 cut(s)	1864
Zsp2I	ATGCAT	1 cut(s)	1876

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.