Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0014140

Physical Location & Seq

Genomic Coordinates Reverse (-)

24535629 .. 24539509

Gene Structure 3881 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G010570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1908 bp

ATGATTACCAACCTCTTTGCTTTCTTCTTCTTCTTCCTCTCCTCTGCTTCATTCTGTCTCTCCTATGAACCTCGCAACCATGAAGTGGTGGCTTTGATAAACTTGAAGAGCACTTTGAATGATCCTCATGGGGTTTTAACCAACTGGGATGGAGACTCTGTAGACCCATGTAGCTGGGCTATGATCACTTGCTCATCTGAGAATGTTGTTGTAGGCCTAGGAGCTCCAAGCCAGTCTCTCTCTGGAACTTTAACTGCGGCTATAGGAAATCTCACAAATCTTCGACAAGTGTTGCTGCAGAACAACAATATATCAGGTAAACTCCCAGCAGAGCTCGGTACTCTCCCCAAGCTTCAAACTCTAGATCTCTCCAATAATCGGTTCTCGGGAGTCGTCCCAGACTCTCTGGGTCAGTTGAGTAGTCTGCAATACCTGAGGCTGAACAACAATAGCTTGTCTGGGGTTTTCCCTGTGTCTTTAGCCAAAATCCCTGCGCTTGCTTTCTTGGACTTGTCTTATAACAATCTTAGTGGACCAATACCCAAATTCCCAGCCAGAACTTTCAATGTTGTCGGAAACCCACTGATTTGTGGAAGCAGCTCCACAGAAGGATGCTCTGGATCAGCCCCTGTCCCTCTTTCGTTATCACTAAAACCATCACCTGGAAAAAACAAGTCCAAGATAGTAGCAATTGCACTTGGGGTGAGCTTGAGTTGTGCCTTTCTCATGCTCCTATCACTTGGAATCCTCTGGTACAGAAAGAAGCAGAAGAGCCAAACTATTCTGAACATCAGTGACATTCAAGAAGAGGGACTTGTGAGCTTAGGCAACCTCAGAAACTTCACTTTCAAAGAGCTTCAAGTTGCCACGGACCATTTTAGCTCTAAGAACATACTGGGTGCTGGAGGTTTTGGGAATGTGTACAAGGGAAAGCTAGGGGATGGGACTATGGTGGCAGTGAAACGACTCAAGGATGTAACAGGAACAGCTGGAGAGTCACAATTTAGGACAGAATTAGAGATGATAAGCCTAGCAGTGCACCGGAATTTGCTTCGGTTAATTGGATATTGTGCTACTTCTAATGAGAGGCTTCTGGTGTACCCGTACATGTCCAATGGCAGTGTCGCCTTCAGGCTTAGAGGAAAGCCAGCACTAGATTGGAACACAAGGAAGAGAATAGCAATTGGAGCTGCTAGAGGTCTTCTGTATCTACATGAGCAATGTGATCCAAAGATTATACACAGAGACGTGAAGGCTGCAAATGTGCTCCTAGATGACTACTGCGAGGCAATTGTTGGTGATTTTGGCCTTGCAAAGCTCCTCGACCATGGTGATTCTCATGTGACCACTGCTGTCCGTGGGACTGTTGGGCATATTGCACCAGAATACCTTTCTACTGGTCAATCATCTGAAAAAACTGATGTTTTTGGATTTGGCATTCTCTTGATAGAGCTCATAACTGGGATGAGAGCTCTGGAGTTTGGCAAAACAGTTAATCAGAAAGGAGCCATGCTTGAGTGGGTGAAGACAGTACAACAAGAAAAGAAAGTGGAGCTCTTGGTAGATAGAGAACTGGGGAACAATTACGATCGGATTGAGGTTGGTGAAATGCTGCAAGTGGCTTTGCTATGCACTCAATACCTACCAGCTCACCGCCCCAAGATGTCGGAAGTGGTCAGGATGCTTGAAGGCGATGGACTAGCGGAGAAGTGGGCAGCGTCACATAATCATAGTAAATCCAACATGGACCTCTTCCACACTCACAACAGTAGCAAAAGCACTCCCCACAGTACTTGGAATGCATCCAAACATGATGGCAGTGAACGCATGTTTGGCACATCTATGGATGAGGATGATGATGAGCATTCCTTGGATTCCTATGCCATGGAACTCTCTGGTCCCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004713 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009987 GO:0010150 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018108 GO:0018193 GO:0018212 GO:0019199 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0090693 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

635

Amino Acids

69.23

Weight (kDa)

6.99

Isoelectric Point (pI)

32.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	26 - 65	5.3e-13	Leucine rich repeat N-terminal domain
LRR_14	PF23598	85 - 170	5.9e-10	Leucine-rich repeat region
LRR_4	PF12799	92 - 127	8.9e-07	Leucine Rich repeats (2 copies)
LRR_8	PF13855	116 - 176	1.4e-13	Leucine rich repeat
Pkinase	PF00069	294 - 558	5.4e-40	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	296 - 562	8.8e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014140)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23950 AT4G30520
fragaria_vesca	FvH4_4g08870 FvH4_4g08870
malus_domestica	MD16G1259200.v1.1
prunus_persica	Prupe.1G100800_v2.0.a1
pyrus_communis	pycom16g22670
rosa_chinensis	RchiOBHm_Chr4g0405301
rosa_laevigata	RLG00000008859
rosa_multiflora	Rmu_sc0000161.1_g000017
rosa_roxburghii	Rroxscaffold_5G00349670
rosa_rugosa	Rorug04G0057100 Rorug04G0057200
rosa_samantha	Rh4AG130600 Rh4CG137500 Rh4DG124000
rosa_wichuraiana	Rw4G010570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	519
AccB7I	CCANNNNNTGG	2 cut(s)	85, 662
AccI	GTMKAC	1 cut(s)	162
AciI	CCGC	3 cut(s)	257, 1654, 1703
AclWI	GGATC	3 cut(s)	116, 628, 1220
AcsI	RAATTY	2 cut(s)	545, 1045
AcuI	CTGAAG	1 cut(s)	1114
AfaI	GTAC	7 cut(s)	340, 755, 923, 1100, 1106, 1533, 1792
AfiI	CCNNNNNNNGG	3 cut(s)	85, 378, 662
AflIII	ACRYGT	1 cut(s)	1107
AgsI	TTSAA	8 cut(s)	106, 118, 356, 565, 803, 850, 860, 1688
AjiI	CACGTC	1 cut(s)	1249
AjnI	CCWGG	1 cut(s)	661
AjuI	GAANNNNNNNTTGG	4 cut(s)	365, 397, 1815, 1847
Alw21I	GWGCWC	8 cut(s)	113, 226, 336, 1041, 1269, 1455, 1474, 1557
Alw26I	GTCTC	4 cut(s)	62, 147, 240, 1239
Alw44I	GTGCAC	1 cut(s)	1037
AlwI	GGATC	3 cut(s)	116, 628, 1220
AlwNI	CAGNNNCTG	1 cut(s)	629
Ama87I	CYCGRG	1 cut(s)	385
AoxI	GGCC	2 cut(s)	214, 1306
ApaLI	GTGCAC	1 cut(s)	1037
ApeKI	GCWGC	6 cut(s)	295, 597, 1190, 1256, 1612, 1715
ApoI	RAATTY	2 cut(s)	545, 1045
AspA2I	CCTAGG	1 cut(s)	217
AspLEI	GCGC	1 cut(s)	496
AspS9I	GGNCC	4 cut(s)	533, 871, 1747, 1898
AsuHPI	GGTGA	7 cut(s)	651, 715, 1310, 1343, 1534, 1616, 1643
AvaI	CYCGRG	1 cut(s)	385
AvaII	GGWCC	4 cut(s)	533, 871, 1747, 1898
AvrII	CCTAGG	1 cut(s)	217
AxyI	CCTNAGG	1 cut(s)	434
BaeGI	GKGCMC	1 cut(s)	1041
BanII	GRGCYC	5 cut(s)	226, 336, 1455, 1474, 1557
BbsI	GAAGAC	2 cut(s)	1193, 1532
Bbv12I	GWGCWC	8 cut(s)	113, 226, 336, 1041, 1269, 1455, 1474, 1557
BbvI	GCAGC	6 cut(s)	282, 609, 1177, 1243, 1599, 1727
BccI	CCATC	5 cut(s)	143, 664, 935, 1688, 1808
BciT130I	CCWGG	1 cut(s)	663
BclI	TGATCA	1 cut(s)	183
BcoDI	GTCTC	4 cut(s)	62, 147, 240, 1239
BfaI	CTAG	8 cut(s)	218, 362, 935, 1031, 1154, 1194, 1271, 1700
BfmI	CTRYAG	3 cut(s)	159, 261, 296
BglII	AGATCT	1 cut(s)	364
BisI	GCNGC	7 cut(s)	258, 296, 598, 1191, 1257, 1613, 1716
BlnI	CCTAGG	1 cut(s)	217
BlsI	GCNGC	7 cut(s)	259, 297, 599, 1192, 1258, 1614, 1717
BmcAI	AGTACT	1 cut(s)	1792
Bme1390I	CCNGG	1 cut(s)	663
Bme18I	GGWCC	4 cut(s)	533, 871, 1747, 1898
BmeT110I	CYCGRG	1 cut(s)	385
BmgBI	CACGTC	1 cut(s)	1249
BmgT120I	GGNCC	4 cut(s)	533, 871, 1747, 1898
BmiI	GGNNCC	2 cut(s)	1507, 1900
BmrFI	CCNGG	1 cut(s)	663
BmrI	ACTGGG	4 cut(s)	154, 905, 1470, 1583
BmsI	GCATC	3 cut(s)	602, 1671, 1811
BmuI	ACTGGG	4 cut(s)	154, 905, 1470, 1583
BpiI	GAAGAC	2 cut(s)	1193, 1532
BpmI	CTGGAG	3 cut(s)	924, 1011, 1496
Bpu10I	CCTNAGC	1 cut(s)	823
BpuEI	CTTGAG	3 cut(s)	730, 953, 1535
BsaJI	CCNNGG	6 cut(s)	217, 867, 1327, 1357, 1869, 1884
BsaWI	WCCGGW	1 cut(s)	1041
BsaXI	ACNNNNNCTCC	2 cut(s)	144, 174
Bsc4I	CCNNNNNNNGG	3 cut(s)	85, 378, 662
Bse1I	ACTGG	6 cut(s)	149, 232, 900, 1402, 1465, 1578
Bse21I	CCTNAGG	1 cut(s)	434
Bse3DI	GCAATG	1 cut(s)	1226
BseBI	CCWGG	1 cut(s)	663
BseDI	CCNNGG	6 cut(s)	217, 867, 1327, 1357, 1869, 1884
BseGI	GGATG	9 cut(s)	154, 617, 946, 979, 1470, 1686, 1802, 1852, 1858
BseLI	CCNNNNNNNGG	3 cut(s)	85, 378, 662
BseMI	GCAATG	1 cut(s)	1226
BseMII	CTCAG	3 cut(s)	189, 425, 847
BseNI	ACTGG	6 cut(s)	149, 232, 900, 1402, 1465, 1578
BseRI	GAGGAG	2 cut(s)	31, 1310
BseSI	GKGCMC	1 cut(s)	1041
BseXI	GCAGC	6 cut(s)	282, 609, 1177, 1243, 1599, 1727
BseYI	CCCAGC	3 cut(s)	174, 325, 550
Bsh1285I	CGRYCG	1 cut(s)	1591
BshFI	GGCC	2 cut(s)	216, 1308
BsiEI	CGRYCG	1 cut(s)	1591
BsiHKAI	GWGCWC	8 cut(s)	113, 226, 336, 1041, 1269, 1455, 1474, 1557
BsiHKCI	CYCGRG	1 cut(s)	385
BsiSI	CCGG	1 cut(s)	1042
BslFI	GGGAC	6 cut(s)	380, 617, 825, 958, 1375, 1884
BslI	CCNNNNNNNGG	3 cut(s)	85, 378, 662
BsmAI	GTCTC	4 cut(s)	62, 147, 240, 1239
BsmBI	CGTCTC	1 cut(s)	1239
BsmFI	GGGAC	6 cut(s)	380, 617, 825, 958, 1375, 1884
BsmI	GAATGC	3 cut(s)	1437, 1804, 1864
BsnI	GGCC	2 cut(s)	216, 1308
BsoBI	CYCGRG	1 cut(s)	385
Bsp1286I	GDGCHC	8 cut(s)	113, 226, 336, 1041, 1269, 1455, 1474, 1557
Bsp1407I	TGTACA	1 cut(s)	921
Bsp143I	GATC	6 cut(s)	121, 183, 364, 620, 1225, 1588
Bsp19I	CCATGG	2 cut(s)	1327, 1884
BspACI	CCGC	3 cut(s)	257, 1654, 1703
BspANI	GGCC	2 cut(s)	216, 1308
BspCNI	CTCAG	3 cut(s)	190, 426, 846
BspLI	GGNNCC	2 cut(s)	1507, 1900
BspMAI	CTGCAG	1 cut(s)	300
BspPI	GGATC	3 cut(s)	116, 628, 1220
BspQI	GCTCTTC	2 cut(s)	101, 764
BsrDI	GCAATG	1 cut(s)	1226
BsrGI	TGTACA	1 cut(s)	921
BsrI	ACTGG	6 cut(s)	149, 232, 900, 1402, 1465, 1578
BssECI	CCNNGG	6 cut(s)	217, 867, 1327, 1357, 1869, 1884
BssMI	GATC	6 cut(s)	121, 183, 364, 620, 1225, 1588
BssT1I	CCWWGG	4 cut(s)	217, 1327, 1869, 1884
Bst2UI	CCWGG	1 cut(s)	663
Bst4CI	ACNGT	5 cut(s)	1366, 1492, 1531, 1769, 1790
Bst6I	CTCTTC	5 cut(s)	101, 764, 801, 1166, 1757
BstAUI	TGTACA	1 cut(s)	921
BstC8I	GCNNGC	2 cut(s)	498, 1149
BstDEI	CTNAG	7 cut(s)	198, 434, 527, 823, 833, 885, 1136
BstDSI	CCRYGG	4 cut(s)	867, 1327, 1357, 1884
BstF5I	GGATG	9 cut(s)	154, 617, 946, 979, 1470, 1686, 1802, 1852, 1858
BstHHI	GCGC	1 cut(s)	496
BstKTI	GATC	6 cut(s)	124, 186, 367, 623, 1228, 1591
BstMAI	GTCTC	4 cut(s)	62, 147, 240, 1239
BstMBI	GATC	6 cut(s)	121, 183, 364, 620, 1225, 1588
BstMCI	CGRYCG	1 cut(s)	1591
BstMWI	GCNNNNNNNGC	3 cut(s)	1187, 1824, 1833
BstNI	CCWGG	1 cut(s)	663
BstNSI	RCATGY	2 cut(s)	1111, 1831
BstSCI	CCNGG	1 cut(s)	661
BstSFI	CTRYAG	3 cut(s)	159, 261, 296
BstSLI	GKGCMC	1 cut(s)	1041
BstV1I	GCAGC	6 cut(s)	282, 609, 1177, 1243, 1599, 1727
BstV2I	GAAGAC	2 cut(s)	1193, 1532
BstX2I	RGATCY	1 cut(s)	364
BstXI	CCANNNNNNTGG	1 cut(s)	174
BstYI	RGATCY	1 cut(s)	364
Bsu36I	CCTNAGG	1 cut(s)	434
BsuRI	GGCC	2 cut(s)	216, 1308
BtgI	CCRYGG	4 cut(s)	867, 1327, 1357, 1884
BtgZI	GCGATG	1 cut(s)	1707
BtrI	CACGTC	1 cut(s)	1249
BtsCI	GGATG	9 cut(s)	154, 617, 946, 979, 1470, 1686, 1802, 1852, 1858
BtsI	GCAGTG	5 cut(s)	963, 1041, 1126, 1347, 1825
BtsIMutI	CAGTG	7 cut(s)	581, 799, 963, 1041, 1126, 1347, 1825
Cac8I	GCNNGC	2 cut(s)	498, 1149
CaiI	CAGNNNCTG	1 cut(s)	629
CfoI	GCGC	1 cut(s)	496
Cfr13I	GGNCC	4 cut(s)	533, 871, 1747, 1898
CseI	GACGC	1 cut(s)	1707
Csp6I	GTAC	7 cut(s)	339, 754, 922, 1099, 1105, 1532, 1791
CspCI	CAANNNNNGTGG	4 cut(s)	511, 546, 1775, 1810
CviQI	GTAC	7 cut(s)	339, 754, 922, 1099, 1105, 1532, 1791
DdeI	CTNAG	7 cut(s)	198, 434, 527, 823, 833, 885, 1136
DpnI	GATC	6 cut(s)	123, 185, 366, 622, 1227, 1590
DpnII	GATC	6 cut(s)	121, 183, 364, 620, 1225, 1588
Eam1104I	CTCTTC	5 cut(s)	101, 764, 801, 1166, 1757
EarI	CTCTTC	5 cut(s)	101, 764, 801, 1166, 1757
Ecl136II	GAGCTC	5 cut(s)	224, 334, 1453, 1472, 1555
Eco130I	CCWWGG	4 cut(s)	217, 1327, 1869, 1884
Eco147I	AGGCCT	1 cut(s)	216
Eco24I	GRGCYC	5 cut(s)	226, 336, 1455, 1474, 1557
Eco47I	GGWCC	4 cut(s)	533, 871, 1747, 1898
Eco53kI	GAGCTC	5 cut(s)	224, 334, 1453, 1472, 1555
Eco57I	CTGAAG	1 cut(s)	1114
Eco81I	CCTNAGG	1 cut(s)	434
Eco88I	CYCGRG	1 cut(s)	385
EcoICRI	GAGCTC	5 cut(s)	224, 334, 1453, 1472, 1555
EcoRII	CCWGG	1 cut(s)	661
EcoT14I	CCWWGG	4 cut(s)	217, 1327, 1869, 1884
EcoT22I	ATGCAT	1 cut(s)	1804
EcoT38I	GRGCYC	5 cut(s)	226, 336, 1455, 1474, 1557
ErhI	CCWWGG	4 cut(s)	217, 1327, 1869, 1884
Esp3I	CGTCTC	1 cut(s)	1239
FalI	AAGNNNNNCTT	2 cut(s)	798, 830
FaqI	GGGAC	6 cut(s)	380, 617, 825, 958, 1375, 1884
FbaI	TGATCA	1 cut(s)	183
FblI	GTMKAC	1 cut(s)	162
Fnu4HI	GCNGC	7 cut(s)	258, 296, 598, 1191, 1257, 1613, 1716
FokI	GGATG	9 cut(s)	161, 624, 953, 986, 1477, 1693, 1789, 1859, 1865
FriOI	GRGCYC	5 cut(s)	226, 336, 1455, 1474, 1557
Fsp4HI	GCNGC	7 cut(s)	258, 296, 598, 1191, 1257, 1613, 1716
FspBI	CTAG	8 cut(s)	218, 362, 935, 1031, 1154, 1194, 1271, 1700
GlaI	GCGC	1 cut(s)	495
GluI	GCNGC	7 cut(s)	258, 296, 598, 1191, 1257, 1613, 1716
GsaI	CCCAGC	3 cut(s)	178, 329, 554
GsuI	CTGGAG	3 cut(s)	924, 1011, 1496
HaeIII	GGCC	2 cut(s)	216, 1308
HapII	CCGG	1 cut(s)	1042
HgaI	GACGC	1 cut(s)	1707
HhaI	GCGC	1 cut(s)	496
Hin6I	GCGC	1 cut(s)	494
HinP1I	GCGC	1 cut(s)	494
HindIII	AAGCTT	1 cut(s)	350
HinfI	GANTC	8 cut(s)	155, 390, 401, 744, 966, 995, 1334, 1874
HpaII	CCGG	1 cut(s)	1042
HphI	GGTGA	7 cut(s)	651, 715, 1310, 1343, 1534, 1616, 1643
Hpy166II	GTNNAC	7 cut(s)	163, 320, 533, 922, 1039, 1099, 1823
Hpy188I	TCNGA	8 cut(s)	199, 575, 786, 836, 1411, 1500, 1593, 1669
Hpy188III	TCNNGA	8 cut(s)	243, 362, 387, 618, 803, 1444, 1475, 1678
Hpy8I	GTNNAC	7 cut(s)	163, 320, 533, 922, 1039, 1099, 1823
HpyAV	CCTTC	4 cut(s)	602, 1138, 1246, 1682
HpyCH4III	ACNGT	5 cut(s)	1366, 1492, 1531, 1769, 1790
HpyCH4IV	ACGT	1 cut(s)	1248
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1187, 1824, 1833
HpyF3I	CTNAG	7 cut(s)	198, 434, 527, 823, 833, 885, 1136
HpySE526I	ACGT	1 cut(s)	1248
HspAI	GCGC	1 cut(s)	494
Ksp22I	TGATCA	1 cut(s)	183
Kzo9I	GATC	6 cut(s)	121, 183, 364, 620, 1225, 1588
LguI	GCTCTTC	2 cut(s)	101, 764
LmnI	GCTCC	9 cut(s)	221, 229, 605, 735, 1187, 1272, 1323, 1505, 1552
Lsp1109I	GCAGC	6 cut(s)	282, 609, 1177, 1243, 1599, 1727
LweI	GCATC	3 cut(s)	602, 1671, 1811
MaeI	CTAG	8 cut(s)	218, 362, 935, 1031, 1154, 1194, 1271, 1700
MaeII	ACGT	1 cut(s)	1248
MaeIII	GTNAC	5 cut(s)	794, 976, 996, 1342, 1719
MalI	GATC	6 cut(s)	123, 185, 366, 622, 1227, 1590
MboI	GATC	6 cut(s)	121, 183, 364, 620, 1225, 1588
MfeI	CAATTG	3 cut(s)	690, 1182, 1290
MflI	RGATCY	1 cut(s)	364
MhlI	GDGCHC	8 cut(s)	113, 226, 336, 1041, 1269, 1455, 1474, 1557
MluCI	AATT	9 cut(s)	545, 690, 1001, 1013, 1045, 1059, 1182, 1290, 1582
MlyI	GAGTC	5 cut(s)	149, 395, 399, 960, 1004
MmeI	TCCRAC	3 cut(s)	553, 1647, 1764
Mph1103I	ATGCAT	1 cut(s)	1804
MseI	TTAA	4 cut(s)	137, 251, 1058, 1494
MslI	CAYNNNNRTG	1 cut(s)	1841
MspA1I	CMGCKG	1 cut(s)	989
MspI	CCGG	1 cut(s)	1042
MspR9I	CCNGG	1 cut(s)	663
MunI	CAATTG	3 cut(s)	690, 1182, 1290
Mva1269I	GAATGC	3 cut(s)	1437, 1804, 1864
MvaI	CCWGG	1 cut(s)	663
MwoI	GCNNNNNNNGC	3 cut(s)	1187, 1824, 1833
NcoI	CCATGG	2 cut(s)	1327, 1884
NdeII	GATC	6 cut(s)	121, 183, 364, 620, 1225, 1588
NlaIV	GGNNCC	2 cut(s)	1507, 1900
NmuCI	GTSAC	4 cut(s)	794, 996, 1342, 1719
NsiI	ATGCAT	1 cut(s)	1804
NspI	RCATGY	2 cut(s)	1111, 1831
PceI	AGGCCT	1 cut(s)	216
PciI	ACATGT	1 cut(s)	1107
PciSI	GCTCTTC	2 cut(s)	101, 764
PctI	GAATGC	3 cut(s)	1437, 1804, 1864
PfeI	GAWTC	3 cut(s)	744, 1334, 1874
PflMI	CCANNNNNTGG	2 cut(s)	85, 662
PkrI	GCNGC	7 cut(s)	259, 297, 599, 1192, 1258, 1614, 1717
Ple19I	CGATCG	1 cut(s)	1591
PleI	GAGTC	5 cut(s)	149, 395, 398, 960, 1003
PpsI	GAGTC	5 cut(s)	149, 395, 398, 960, 1003
PscI	ACATGT	1 cut(s)	1107
PsiI	TTATAA	1 cut(s)	519
Psp124BI	GAGCTC	5 cut(s)	226, 336, 1455, 1474, 1557
Psp6I	CCWGG	1 cut(s)	661
PspFI	CCCAGC	3 cut(s)	174, 325, 550
PspGI	CCWGG	1 cut(s)	661
PspN4I	GGNNCC	2 cut(s)	1507, 1900
PspPI	GGNCC	4 cut(s)	533, 871, 1747, 1898
PstI	CTGCAG	1 cut(s)	300
PstNI	CAGNNNCTG	1 cut(s)	629
PsuI	RGATCY	1 cut(s)	364
PvuI	CGATCG	1 cut(s)	1591
PvuII	CAGCTG	1 cut(s)	989
RsaI	GTAC	7 cut(s)	340, 755, 923, 1100, 1106, 1533, 1792
RsaNI	GTAC	7 cut(s)	339, 754, 922, 1099, 1105, 1532, 1791
RseI	CAYNNNNRTG	1 cut(s)	1841
SacI	GAGCTC	5 cut(s)	226, 336, 1455, 1474, 1557
SapI	GCTCTTC	2 cut(s)	101, 764
SaqAI	TTAA	4 cut(s)	137, 251, 1058, 1494
SatI	GCNGC	7 cut(s)	258, 296, 598, 1191, 1257, 1613, 1716
Sau3AI	GATC	6 cut(s)	121, 183, 364, 620, 1225, 1588
Sau96I	GGNCC	4 cut(s)	533, 871, 1747, 1898
ScaI	AGTACT	1 cut(s)	1792
SchI	GAGTC	5 cut(s)	149, 395, 399, 960, 1004
ScrFI	CCNGG	1 cut(s)	663
SduI	GDGCHC	8 cut(s)	113, 226, 336, 1041, 1269, 1455, 1474, 1557
SfaNI	GCATC	3 cut(s)	602, 1671, 1811
SfcI	CTRYAG	3 cut(s)	159, 261, 296
SinI	GGWCC	4 cut(s)	533, 871, 1747, 1898
SmiMI	CAYNNNNRTG	1 cut(s)	1841
SmlI	CTYRAG	3 cut(s)	709, 968, 1514
SmoI	CTYRAG	3 cut(s)	709, 968, 1514
Sse9I	AATT	9 cut(s)	545, 690, 1001, 1013, 1045, 1059, 1182, 1290, 1582
SseBI	AGGCCT	1 cut(s)	216
SsiI	CCGC	3 cut(s)	257, 1654, 1703
SspMI	CTAG	8 cut(s)	218, 362, 935, 1031, 1154, 1194, 1271, 1700
SstI	GAGCTC	5 cut(s)	226, 336, 1455, 1474, 1557
StuI	AGGCCT	1 cut(s)	216
StyD4I	CCNGG	1 cut(s)	661
StyI	CCWWGG	4 cut(s)	217, 1327, 1869, 1884
TaaI	ACNGT	5 cut(s)	1366, 1492, 1531, 1769, 1790
TaiI	ACGT	1 cut(s)	1251
TaqI	TCGA	2 cut(s)	283, 1323
TasI	AATT	9 cut(s)	545, 690, 1001, 1013, 1045, 1059, 1182, 1290, 1582
TatI	WGTACW	3 cut(s)	921, 1531, 1790
TauI	GCSGC	1 cut(s)	260
TfiI	GAWTC	3 cut(s)	744, 1334, 1874
Tru1I	TTAA	4 cut(s)	137, 251, 1058, 1494
Tru9I	TTAA	4 cut(s)	137, 251, 1058, 1494
TscAI	CASTG	7 cut(s)	588, 799, 963, 1041, 1126, 1354, 1825
TseFI	GTSAC	4 cut(s)	794, 996, 1342, 1719
TseI	GCWGC	6 cut(s)	295, 597, 1190, 1256, 1612, 1715
Tsp45I	GTSAC	4 cut(s)	794, 996, 1342, 1719
TspDTI	ATGAA	3 cut(s)	39, 81, 96
TspGWI	ACGGA	2 cut(s)	884, 1346
TspRI	CASTG	7 cut(s)	588, 799, 963, 1041, 1126, 1354, 1825
Van91I	CCANNNNNTGG	2 cut(s)	85, 662
VneI	GTGCAC	1 cut(s)	1037
VpaK11BI	GGWCC	4 cut(s)	533, 871, 1747, 1898
XapI	RAATTY	2 cut(s)	545, 1045
XbaI	TCTAGA	1 cut(s)	361
XceI	RCATGY	2 cut(s)	1111, 1831
XcmI	CCANNNNNNNNNTGG	2 cut(s)	239, 1155
XmaJI	CCTAGG	1 cut(s)	217
XmiI	GTMKAC	1 cut(s)	162
XspI	CTAG	8 cut(s)	218, 362, 935, 1031, 1154, 1194, 1271, 1700
ZrmI	AGTACT	1 cut(s)	1792
Zsp2I	ATGCAT	1 cut(s)	1804

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.