Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0014140

Physical Location & Seq

Genomic Coordinates Reverse (-)

22770207 .. 22774461

Gene Structure 4255 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00349670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGTTCTTCTGTGATGGGTTTTCTCTGAATTCTCTTCTTCATTCTCCATTAGTCCATTACACCATGATTGCCAACCTCTTTGCTTTCTTCTTCTTCTTCTTCTTCTTCTTTCTCTCCTCTGCTTCACTCTGTCTTTCCTATGAACCTCGCAACCATGAAGTGGTGGCTTTGATAAACTTGAAGAGCACTTTGAATGATCCTCATGGGGTTTTAACCAACTGGGATGGAGACTCTGTAGACCCATGTAGCTGGGCTATGATCACTTGCTCATCTGAGAATGTTGTTGTAGGCCTAGGAGCTCCAAGCCAGTCTCTGTCTGGAACTTTAACTGCGGCTATAGGAAATCTCACAAATCTTCGACAAGTGTTGCTGCAGAACAACAATATATCAGGTAAACTCCCAGCGGAGCTCGGTACTCTTCCCAAGCTTCAAACTCTAGATCTCTCTAATAATCGATTCTCGGGTGTCGTCCCAGACTCTCTGGGTCAGTTGAGTAGTCTGCAATACCTGAGGCTGAACAACAATAGCTTGTCTGGGGTTTTCCCTGTGTCTTTAGCCAAAATCCCTGCGCTTGCTTTCTTGGACTTGTCTTATAACAATCTTAGTGGACCAATACCCAAATTCCCAGCCAGAACTTTCAATGTTGTCGGAAACCCACTGATTTGTGGAAGCAGCTCTACAGAAGGATGCTCTGGATCGGCCCCTGTCCCTCTTTCGTTATCACTAAAACCATCACCTGGAAAAAACAAGTCCAAGATAGTAGCAATTGCACTTGGGGTGAGCTTCAGTTGTGCCTTTCTCATGCTCCTATCACTTGGAATCCTCTGGTACAGAAAGAAGCAGAAGAGCCAAACCATTCTGAACATCAGTGACATTCAAGAAGAGGGACTTGTGAGCTTAGGCAACCTCAGAAACTTCACTTTCAAAGAGCTTCAAGTTGCCACGGACCATTTTAGCTCCAAGAACATACTGGGTGCTGGAGGTTTTGGGAATGTGTACAAGGGAAAGCTAGGGGATGGGACTATGGTGGCAGTGAAACGACTCAAGGATGTAACAGGAACAGCTGGAGAGTCACAATTTAGGACAGAATTAGAGATGATAAGCCTAGCAGTGCACCGGAATTTGCTTCGGTTAATTGGATATTGTGCTACTTCTAATGAGAGGCTTCTGGTGTACCCGTACATGTCCAATGGCAGTGTCGCCTTCAGGCTTAGAGTCACAACAGGAAAGCCAGCACTAGATTGGAACACAAGGAAGAGAATAGCAATTGGAGCTGCTAGAGGTCTTCTGTATCTGCATGAGCAATGTGATCCAAAGATTATACACAGAGACGTGAAGGCTGCAAATGTGCTCCTAGATGACTACTGCGAGGCAATTGTTGGTGATTTTGGCCTTGCAAAGCTCCTCGACCATGCTGATTCTCATGTGACCACTGCTGTCCGTGGGACTGTTGGGCATATTGCACCAGAATACCTTTCTACTGGTCAATCATCTGAAAAAACTGATGTTTTTGGATTTGGCATTCTCTTGATAGAGCTCATAACTGGGATGAGAGCTCTGGAGTTTGGCAAAACAGTTAATCAGAAAGGAGCCATGCTTGAGTGGGTGAAGACAGTACAACAAGAAAAGAAAGTGGAGCTCTTGGTGGATAGAGAACTGGGGAACAATTACGATCGGATTGAGGTTGGTGAAATGCTGCAAGTGGCTTTGCTATGCACCCAATACCTACCAGCTCACCGCCCCAAGATGTCGGAAGTGGTCCGGATGCTTGAAGGCGATGGACTAGCGGAAAAGTGGGCAGCGTCACATAATCATAGTAAATCCAACATGGACCTCCTCCATACTCACAACAGTAGCAAAAGCACTCCCCACAGTACTTGGAATGCATCGAAACATGATGGCAGTGAACGCATGTTTGGCACATCTATGGATGAGGATGATGATGAGCATTCCTTGGATTCCTATGCCATGGAACTCTCGGGTCCCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004713 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009987 GO:0010150 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018108 GO:0018193 GO:0018212 GO:0019199 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0090693 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

663

Amino Acids

72.48

Weight (kDa)

6.83

Isoelectric Point (pI)

33.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	51 - 90	5.6e-13	Leucine rich repeat N-terminal domain
LRR_14	PF23598	110 - 195	6.4e-10	Leucine-rich repeat region
LRR_4	PF12799	117 - 152	9.3e-07	Leucine Rich repeats (2 copies)
LRR_8	PF13855	141 - 201	1.5e-13	Leucine rich repeat
Pkinase	PF00069	319 - 586	7.8e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	321 - 590	8e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014140)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23950 AT4G30520
fragaria_vesca	FvH4_4g08870 FvH4_4g08870
malus_domestica	MD16G1259200.v1.1
prunus_persica	Prupe.1G100800_v2.0.a1
pyrus_communis	pycom16g22670
rosa_chinensis	RchiOBHm_Chr4g0405301
rosa_laevigata	RLG00000008859
rosa_multiflora	Rmu_sc0000161.1_g000017
rosa_roxburghii	Rroxscaffold_5G00349670
rosa_rugosa	Rorug04G0057100 Rorug04G0057200
rosa_samantha	Rh4AG130600 Rh4CG137500 Rh4DG124000
rosa_wichuraiana	Rw4G010570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	594
AccB7I	CCANNNNNTGG	2 cut(s)	160, 737
AccI	GTMKAC	1 cut(s)	237
AccIII	TCCGGA	1 cut(s)	1761
AciI	CCGC	4 cut(s)	332, 404, 1738, 1787
AclWI	GGATC	3 cut(s)	191, 703, 1304
AcsI	RAATTY	3 cut(s)	28, 620, 1120
AcuI	CTGAAG	2 cut(s)	769, 1189
AfaI	GTAC	7 cut(s)	415, 830, 998, 1175, 1181, 1617, 1876
AfiI	CCNNNNNNNGG	2 cut(s)	160, 737
AflIII	ACRYGT	1 cut(s)	1182
AgsI	TTSAA	8 cut(s)	181, 193, 431, 640, 878, 925, 935, 1772
AjiI	CACGTC	1 cut(s)	1333
AjnI	CCWGG	1 cut(s)	736
AjuI	GAANNNNNNNTTGG	2 cut(s)	1899, 1931
Alw21I	GWGCWC	8 cut(s)	188, 301, 411, 1116, 1353, 1539, 1558, 1641
Alw26I	GTCTC	3 cut(s)	222, 315, 1323
Alw44I	GTGCAC	1 cut(s)	1112
AlwI	GGATC	3 cut(s)	191, 703, 1304
AlwNI	CAGNNNCTG	1 cut(s)	313
Ama87I	CYCGRG	2 cut(s)	460, 1978
Aor13HI	TCCGGA	1 cut(s)	1761
AoxI	GGCC	3 cut(s)	289, 699, 1390
ApaLI	GTGCAC	1 cut(s)	1112
ApeKI	GCWGC	6 cut(s)	370, 672, 1274, 1340, 1696, 1799
ApoI	RAATTY	3 cut(s)	28, 620, 1120
AspA2I	CCTAGG	1 cut(s)	292
AspLEI	GCGC	1 cut(s)	571
AspS9I	GGNCC	6 cut(s)	608, 700, 946, 1759, 1831, 1982
AsuHPI	GGTGA	6 cut(s)	726, 790, 1394, 1618, 1700, 1727
AvaI	CYCGRG	2 cut(s)	460, 1978
AvaII	GGWCC	5 cut(s)	608, 946, 1759, 1831, 1982
AvrII	CCTAGG	1 cut(s)	292
AxyI	CCTNAGG	1 cut(s)	509
BaeGI	GKGCMC	1 cut(s)	1116
BanII	GRGCYC	5 cut(s)	301, 411, 1539, 1558, 1641
BarI	GAAGNNNNNNTAC	2 cut(s)	661, 693
BbsI	GAAGAC	2 cut(s)	1277, 1616
Bbv12I	GWGCWC	8 cut(s)	188, 301, 411, 1116, 1353, 1539, 1558, 1641
BbvI	GCAGC	6 cut(s)	357, 684, 1261, 1327, 1683, 1811
BccI	CCATC	6 cut(s)	8, 218, 739, 1010, 1772, 1892
BciT130I	CCWGG	1 cut(s)	738
BclI	TGATCA	1 cut(s)	258
BcoDI	GTCTC	3 cut(s)	222, 315, 1323
BfaI	CTAG	8 cut(s)	293, 437, 1010, 1106, 1238, 1278, 1355, 1784
BfmI	CTRYAG	4 cut(s)	234, 336, 371, 678
BglII	AGATCT	1 cut(s)	439
BisI	GCNGC	7 cut(s)	333, 371, 673, 1275, 1341, 1697, 1800
BlnI	CCTAGG	1 cut(s)	292
BlsI	GCNGC	7 cut(s)	334, 372, 674, 1276, 1342, 1698, 1801
BmcAI	AGTACT	1 cut(s)	1876
Bme1390I	CCNGG	1 cut(s)	738
Bme18I	GGWCC	5 cut(s)	608, 946, 1759, 1831, 1982
BmeT110I	CYCGRG	2 cut(s)	460, 1978
BmgBI	CACGTC	1 cut(s)	1333
BmgT120I	GGNCC	6 cut(s)	608, 700, 946, 1759, 1831, 1982
BmiI	GGNNCC	4 cut(s)	702, 1591, 1983, 1984
BmrFI	CCNGG	1 cut(s)	738
BmrI	ACTGGG	4 cut(s)	229, 980, 1554, 1667
BmsI	GCATC	3 cut(s)	677, 1755, 1895
BmuI	ACTGGG	4 cut(s)	229, 980, 1554, 1667
BpiI	GAAGAC	2 cut(s)	1277, 1616
BpmI	CTGGAG	3 cut(s)	999, 1086, 1580
Bpu10I	CCTNAGC	1 cut(s)	898
BpuEI	CTTGAG	2 cut(s)	1028, 1619
Bsa29I	ATCGAT	1 cut(s)	454
BsaJI	CCNNGG	5 cut(s)	292, 942, 1441, 1953, 1968
BsaWI	WCCGGW	2 cut(s)	1116, 1761
BsaXI	ACNNNNNCTCC	2 cut(s)	219, 249
Bsc4I	CCNNNNNNNGG	2 cut(s)	160, 737
Bse1I	ACTGG	6 cut(s)	224, 307, 975, 1486, 1549, 1662
Bse21I	CCTNAGG	1 cut(s)	509
Bse3DI	GCAATG	1 cut(s)	1310
BseAI	TCCGGA	1 cut(s)	1761
BseBI	CCWGG	1 cut(s)	738
BseCI	ATCGAT	1 cut(s)	454
BseDI	CCNNGG	5 cut(s)	292, 942, 1441, 1953, 1968
BseGI	GGATG	8 cut(s)	229, 692, 1021, 1054, 1554, 1770, 1936, 1942
BseLI	CCNNNNNNNGG	2 cut(s)	160, 737
BseMI	GCAATG	1 cut(s)	1310
BseMII	CTCAG	3 cut(s)	264, 500, 922
BseNI	ACTGG	6 cut(s)	224, 307, 975, 1486, 1549, 1662
BseRI	GAGGAG	3 cut(s)	106, 1394, 1826
BseSI	GKGCMC	1 cut(s)	1116
BseXI	GCAGC	6 cut(s)	357, 684, 1261, 1327, 1683, 1811
BseYI	CCCAGC	3 cut(s)	249, 400, 625
Bsh1285I	CGRYCG	1 cut(s)	1675
BshFI	GGCC	3 cut(s)	291, 701, 1392
BshVI	ATCGAT	1 cut(s)	454
BsiEI	CGRYCG	1 cut(s)	1675
BsiHKAI	GWGCWC	8 cut(s)	188, 301, 411, 1116, 1353, 1539, 1558, 1641
BsiHKCI	CYCGRG	2 cut(s)	460, 1978
BsiSI	CCGG	2 cut(s)	1117, 1762
BslFI	GGGAC	6 cut(s)	455, 692, 900, 1033, 1459, 1968
BslI	CCNNNNNNNGG	2 cut(s)	160, 737
BsmAI	GTCTC	3 cut(s)	222, 315, 1323
BsmBI	CGTCTC	1 cut(s)	1323
BsmFI	GGGAC	6 cut(s)	455, 692, 900, 1033, 1459, 1968
BsmI	GAATGC	3 cut(s)	1521, 1888, 1948
BsnI	GGCC	3 cut(s)	291, 701, 1392
BsoBI	CYCGRG	2 cut(s)	460, 1978
Bsp1286I	GDGCHC	8 cut(s)	188, 301, 411, 1116, 1353, 1539, 1558, 1641
Bsp13I	TCCGGA	1 cut(s)	1761
Bsp1407I	TGTACA	1 cut(s)	996
Bsp143I	GATC	6 cut(s)	196, 258, 439, 695, 1309, 1672
Bsp19I	CCATGG	1 cut(s)	1968
BspACI	CCGC	4 cut(s)	332, 404, 1738, 1787
BspANI	GGCC	3 cut(s)	291, 701, 1392
BspCNI	CTCAG	3 cut(s)	265, 501, 921
BspDI	ATCGAT	1 cut(s)	454
BspEI	TCCGGA	1 cut(s)	1761
BspLI	GGNNCC	4 cut(s)	702, 1591, 1983, 1984
BspMAI	CTGCAG	1 cut(s)	375
BspPI	GGATC	3 cut(s)	191, 703, 1304
BspQI	GCTCTTC	2 cut(s)	176, 839
BsrDI	GCAATG	1 cut(s)	1310
BsrGI	TGTACA	1 cut(s)	996
BsrI	ACTGG	6 cut(s)	224, 307, 975, 1486, 1549, 1662
BssECI	CCNNGG	5 cut(s)	292, 942, 1441, 1953, 1968
BssMI	GATC	6 cut(s)	196, 258, 439, 695, 1309, 1672
BssT1I	CCWWGG	3 cut(s)	292, 1953, 1968
Bst2UI	CCWGG	1 cut(s)	738
Bst4CI	ACNGT	5 cut(s)	1450, 1576, 1615, 1853, 1874
Bst6I	CTCTTC	6 cut(s)	39, 176, 423, 839, 876, 1250
BstAUI	TGTACA	1 cut(s)	996
BstC8I	GCNNGC	2 cut(s)	573, 1233
BstDEI	CTNAG	6 cut(s)	273, 509, 602, 898, 908, 1211
BstDSI	CCRYGG	3 cut(s)	942, 1441, 1968
BstF5I	GGATG	8 cut(s)	229, 692, 1021, 1054, 1554, 1770, 1936, 1942
BstHHI	GCGC	1 cut(s)	571
BstKTI	GATC	6 cut(s)	199, 261, 442, 698, 1312, 1675
BstMAI	GTCTC	3 cut(s)	222, 315, 1323
BstMBI	GATC	6 cut(s)	196, 258, 439, 695, 1309, 1672
BstMCI	CGRYCG	1 cut(s)	1675
BstMWI	GCNNNNNNNGC	3 cut(s)	1271, 1908, 1917
BstNI	CCWGG	1 cut(s)	738
BstNSI	RCATGY	2 cut(s)	1186, 1915
BstSCI	CCNGG	1 cut(s)	736
BstSFI	CTRYAG	4 cut(s)	234, 336, 371, 678
BstSLI	GKGCMC	1 cut(s)	1116
BstV1I	GCAGC	6 cut(s)	357, 684, 1261, 1327, 1683, 1811
BstV2I	GAAGAC	2 cut(s)	1277, 1616
BstX2I	RGATCY	1 cut(s)	439
BstXI	CCANNNNNNTGG	1 cut(s)	249
BstYI	RGATCY	1 cut(s)	439
Bsu15I	ATCGAT	1 cut(s)	454
Bsu36I	CCTNAGG	1 cut(s)	509
BsuRI	GGCC	3 cut(s)	291, 701, 1392
BsuTUI	ATCGAT	1 cut(s)	454
BtgI	CCRYGG	3 cut(s)	942, 1441, 1968
BtgZI	GCGATG	1 cut(s)	1791
BtrI	CACGTC	1 cut(s)	1333
BtsCI	GGATG	8 cut(s)	229, 692, 1021, 1054, 1554, 1770, 1936, 1942
BtsI	GCAGTG	5 cut(s)	1038, 1116, 1201, 1431, 1909
BtsIMutI	CAGTG	7 cut(s)	656, 874, 1038, 1116, 1201, 1431, 1909
Cac8I	GCNNGC	2 cut(s)	573, 1233
CaiI	CAGNNNCTG	1 cut(s)	313
CfoI	GCGC	1 cut(s)	571
Cfr13I	GGNCC	6 cut(s)	608, 700, 946, 1759, 1831, 1982
ClaI	ATCGAT	1 cut(s)	454
CseI	GACGC	1 cut(s)	1791
Csp6I	GTAC	7 cut(s)	414, 829, 997, 1174, 1180, 1616, 1875
CspCI	CAANNNNNGTGG	4 cut(s)	586, 621, 1859, 1894
CviQI	GTAC	7 cut(s)	414, 829, 997, 1174, 1180, 1616, 1875
DdeI	CTNAG	6 cut(s)	273, 509, 602, 898, 908, 1211
DpnI	GATC	6 cut(s)	198, 260, 441, 697, 1311, 1674
DpnII	GATC	6 cut(s)	196, 258, 439, 695, 1309, 1672
Eam1104I	CTCTTC	6 cut(s)	39, 176, 423, 839, 876, 1250
EarI	CTCTTC	6 cut(s)	39, 176, 423, 839, 876, 1250
Ecl136II	GAGCTC	5 cut(s)	299, 409, 1537, 1556, 1639
Eco130I	CCWWGG	3 cut(s)	292, 1953, 1968
Eco147I	AGGCCT	1 cut(s)	291
Eco24I	GRGCYC	5 cut(s)	301, 411, 1539, 1558, 1641
Eco47I	GGWCC	5 cut(s)	608, 946, 1759, 1831, 1982
Eco53kI	GAGCTC	5 cut(s)	299, 409, 1537, 1556, 1639
Eco57I	CTGAAG	2 cut(s)	769, 1189
Eco81I	CCTNAGG	1 cut(s)	509
Eco88I	CYCGRG	2 cut(s)	460, 1978
EcoICRI	GAGCTC	5 cut(s)	299, 409, 1537, 1556, 1639
EcoO109I	RGGNCCY	1 cut(s)	1982
EcoRI	GAATTC	1 cut(s)	28
EcoRII	CCWGG	1 cut(s)	736
EcoT14I	CCWWGG	3 cut(s)	292, 1953, 1968
EcoT22I	ATGCAT	1 cut(s)	1888
EcoT38I	GRGCYC	5 cut(s)	301, 411, 1539, 1558, 1641
ErhI	CCWWGG	3 cut(s)	292, 1953, 1968
Esp3I	CGTCTC	1 cut(s)	1323
FalI	AAGNNNNNCTT	2 cut(s)	873, 905
FaqI	GGGAC	6 cut(s)	455, 692, 900, 1033, 1459, 1968
FbaI	TGATCA	1 cut(s)	258
FblI	GTMKAC	1 cut(s)	237
Fnu4HI	GCNGC	7 cut(s)	333, 371, 673, 1275, 1341, 1697, 1800
FokI	GGATG	8 cut(s)	236, 699, 1028, 1061, 1561, 1777, 1943, 1949
FriOI	GRGCYC	5 cut(s)	301, 411, 1539, 1558, 1641
Fsp4HI	GCNGC	7 cut(s)	333, 371, 673, 1275, 1341, 1697, 1800
FspBI	CTAG	8 cut(s)	293, 437, 1010, 1106, 1238, 1278, 1355, 1784
GlaI	GCGC	1 cut(s)	570
GluI	GCNGC	7 cut(s)	333, 371, 673, 1275, 1341, 1697, 1800
GsaI	CCCAGC	3 cut(s)	253, 404, 629
GsuI	CTGGAG	3 cut(s)	999, 1086, 1580
HaeIII	GGCC	3 cut(s)	291, 701, 1392
HapII	CCGG	2 cut(s)	1117, 1762
HgaI	GACGC	1 cut(s)	1791
HhaI	GCGC	1 cut(s)	571
Hin6I	GCGC	1 cut(s)	569
HinP1I	GCGC	1 cut(s)	569
HindIII	AAGCTT	1 cut(s)	425
HinfI	GANTC	9 cut(s)	230, 456, 476, 819, 1041, 1070, 1215, 1418, 1958
HpaII	CCGG	2 cut(s)	1117, 1762
HphI	GGTGA	6 cut(s)	726, 790, 1394, 1618, 1700, 1727
Hpy166II	GTNNAC	7 cut(s)	238, 395, 608, 997, 1114, 1174, 1907
Hpy188I	TCNGA	9 cut(s)	27, 274, 650, 861, 911, 1495, 1584, 1677, 1753
Hpy188III	TCNNGA	7 cut(s)	318, 437, 693, 878, 1528, 1559, 1762
Hpy8I	GTNNAC	7 cut(s)	238, 395, 608, 997, 1114, 1174, 1907
HpyAV	CCTTC	4 cut(s)	677, 1213, 1330, 1766
HpyCH4III	ACNGT	5 cut(s)	1450, 1576, 1615, 1853, 1874
HpyCH4IV	ACGT	1 cut(s)	1332
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1271, 1908, 1917
HpyF3I	CTNAG	6 cut(s)	273, 509, 602, 898, 908, 1211
HpySE526I	ACGT	1 cut(s)	1332
HspAI	GCGC	1 cut(s)	569
KflI	GGGWCCC	1 cut(s)	1982
Kpn2I	TCCGGA	1 cut(s)	1761
Ksp22I	TGATCA	1 cut(s)	258
Kzo9I	GATC	6 cut(s)	196, 258, 439, 695, 1309, 1672
LguI	GCTCTTC	2 cut(s)	176, 839
Lsp1109I	GCAGC	6 cut(s)	357, 684, 1261, 1327, 1683, 1811
LweI	GCATC	3 cut(s)	677, 1755, 1895
MaeI	CTAG	8 cut(s)	293, 437, 1010, 1106, 1238, 1278, 1355, 1784
MaeII	ACGT	1 cut(s)	1332
MaeIII	GTNAC	6 cut(s)	869, 1051, 1071, 1216, 1426, 1803
MalI	GATC	6 cut(s)	198, 260, 441, 697, 1311, 1674
MboI	GATC	6 cut(s)	196, 258, 439, 695, 1309, 1672
MfeI	CAATTG	3 cut(s)	765, 1266, 1374
MflI	RGATCY	1 cut(s)	439
MhlI	GDGCHC	8 cut(s)	188, 301, 411, 1116, 1353, 1539, 1558, 1641
MlyI	GAGTC	5 cut(s)	224, 470, 1035, 1079, 1224
MmeI	TCCRAC	3 cut(s)	628, 1731, 1848
Mph1103I	ATGCAT	1 cut(s)	1888
MroI	TCCGGA	1 cut(s)	1761
MseI	TTAA	4 cut(s)	212, 326, 1133, 1578
MslI	CAYNNNNRTG	1 cut(s)	1925
MspA1I	CMGCKG	2 cut(s)	404, 1064
MspI	CCGG	2 cut(s)	1117, 1762
MspR9I	CCNGG	1 cut(s)	738
MunI	CAATTG	3 cut(s)	765, 1266, 1374
Mva1269I	GAATGC	3 cut(s)	1521, 1888, 1948
MvaI	CCWGG	1 cut(s)	738
MwoI	GCNNNNNNNGC	3 cut(s)	1271, 1908, 1917
NcoI	CCATGG	1 cut(s)	1968
NdeII	GATC	6 cut(s)	196, 258, 439, 695, 1309, 1672
NlaIV	GGNNCC	4 cut(s)	702, 1591, 1983, 1984
NmuCI	GTSAC	5 cut(s)	869, 1071, 1216, 1426, 1803
NsiI	ATGCAT	1 cut(s)	1888
NspI	RCATGY	2 cut(s)	1186, 1915
PceI	AGGCCT	1 cut(s)	291
PciI	ACATGT	1 cut(s)	1182
PciSI	GCTCTTC	2 cut(s)	176, 839
PctI	GAATGC	3 cut(s)	1521, 1888, 1948
PfeI	GAWTC	4 cut(s)	456, 819, 1418, 1958
PflMI	CCANNNNNTGG	2 cut(s)	160, 737
PkrI	GCNGC	7 cut(s)	334, 372, 674, 1276, 1342, 1698, 1801
Ple19I	CGATCG	1 cut(s)	1675
PleI	GAGTC	5 cut(s)	224, 470, 1035, 1078, 1223
PpsI	GAGTC	5 cut(s)	224, 470, 1035, 1078, 1223
PpuMI	RGGWCCY	1 cut(s)	1982
PscI	ACATGT	1 cut(s)	1182
PsiI	TTATAA	1 cut(s)	594
Psp124BI	GAGCTC	5 cut(s)	301, 411, 1539, 1558, 1641
Psp5II	RGGWCCY	1 cut(s)	1982
Psp6I	CCWGG	1 cut(s)	736
PspFI	CCCAGC	3 cut(s)	249, 400, 625
PspGI	CCWGG	1 cut(s)	736
PspN4I	GGNNCC	4 cut(s)	702, 1591, 1983, 1984
PspPI	GGNCC	6 cut(s)	608, 700, 946, 1759, 1831, 1982
PspPPI	RGGWCCY	1 cut(s)	1982
PstI	CTGCAG	1 cut(s)	375
PstNI	CAGNNNCTG	1 cut(s)	313
PsuI	RGATCY	1 cut(s)	439
PvuI	CGATCG	1 cut(s)	1675
PvuII	CAGCTG	1 cut(s)	1064
RsaI	GTAC	7 cut(s)	415, 830, 998, 1175, 1181, 1617, 1876
RsaNI	GTAC	7 cut(s)	414, 829, 997, 1174, 1180, 1616, 1875
RseI	CAYNNNNRTG	1 cut(s)	1925
SacI	GAGCTC	5 cut(s)	301, 411, 1539, 1558, 1641
SapI	GCTCTTC	2 cut(s)	176, 839
SaqAI	TTAA	4 cut(s)	212, 326, 1133, 1578
SatI	GCNGC	7 cut(s)	333, 371, 673, 1275, 1341, 1697, 1800
Sau3AI	GATC	6 cut(s)	196, 258, 439, 695, 1309, 1672
Sau96I	GGNCC	6 cut(s)	608, 700, 946, 1759, 1831, 1982
ScaI	AGTACT	1 cut(s)	1876
SchI	GAGTC	5 cut(s)	224, 470, 1035, 1079, 1224
ScrFI	CCNGG	1 cut(s)	738
SduI	GDGCHC	8 cut(s)	188, 301, 411, 1116, 1353, 1539, 1558, 1641
SfaNI	GCATC	3 cut(s)	677, 1755, 1895
SfcI	CTRYAG	4 cut(s)	234, 336, 371, 678
SinI	GGWCC	5 cut(s)	608, 946, 1759, 1831, 1982
SmiMI	CAYNNNNRTG	1 cut(s)	1925
SmlI	CTYRAG	2 cut(s)	1043, 1598
SmoI	CTYRAG	2 cut(s)	1043, 1598
SseBI	AGGCCT	1 cut(s)	291
SsiI	CCGC	4 cut(s)	332, 404, 1738, 1787
SspMI	CTAG	8 cut(s)	293, 437, 1010, 1106, 1238, 1278, 1355, 1784
SstI	GAGCTC	5 cut(s)	301, 411, 1539, 1558, 1641
StuI	AGGCCT	1 cut(s)	291
StyD4I	CCNGG	1 cut(s)	736
StyI	CCWWGG	3 cut(s)	292, 1953, 1968
TaaI	ACNGT	5 cut(s)	1450, 1576, 1615, 1853, 1874
TaiI	ACGT	1 cut(s)	1335
TaqI	TCGA	4 cut(s)	358, 454, 1407, 1889
TatI	WGTACW	3 cut(s)	996, 1615, 1874
TauI	GCSGC	1 cut(s)	335
TfiI	GAWTC	4 cut(s)	456, 819, 1418, 1958
Tru1I	TTAA	4 cut(s)	212, 326, 1133, 1578
Tru9I	TTAA	4 cut(s)	212, 326, 1133, 1578
TscAI	CASTG	7 cut(s)	663, 874, 1038, 1116, 1201, 1438, 1909
TseFI	GTSAC	5 cut(s)	869, 1071, 1216, 1426, 1803
TseI	GCWGC	6 cut(s)	370, 672, 1274, 1340, 1696, 1799
Tsp45I	GTSAC	5 cut(s)	869, 1071, 1216, 1426, 1803
TspDTI	ATGAA	3 cut(s)	29, 156, 171
TspGWI	ACGGA	2 cut(s)	959, 1430
TspRI	CASTG	7 cut(s)	663, 874, 1038, 1116, 1201, 1438, 1909
Van91I	CCANNNNNTGG	2 cut(s)	160, 737
VneI	GTGCAC	1 cut(s)	1112
VpaK11BI	GGWCC	5 cut(s)	608, 946, 1759, 1831, 1982
XapI	RAATTY	3 cut(s)	28, 620, 1120
XbaI	TCTAGA	1 cut(s)	436
XceI	RCATGY	2 cut(s)	1186, 1915
XcmI	CCANNNNNNNNNTGG	3 cut(s)	314, 967, 1239
XmaJI	CCTAGG	1 cut(s)	292
XmiI	GTMKAC	1 cut(s)	237
XspI	CTAG	8 cut(s)	293, 437, 1010, 1106, 1238, 1278, 1355, 1784
ZrmI	AGTACT	1 cut(s)	1876
Zsp2I	ATGCAT	1 cut(s)	1888

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.