Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0014140

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG137500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1737 bp

ATGATCACTTGCTCATCTGAGAATGTTGTTGTAGGCCTAGGAGCTCCAAGCCAGTCTCTCTCTGGAACTTTAACTGCGGCTATAGGAAATCTCACAAATCTTCGACAAGTGTTGCTGCAGAACAACAATATATCAGGTAAACTCCCAGCGGAGCTCGGTACTCTTCCCAAGCTTCAAACTCTAGATCTCTCCAATAATCGGTTCTCGGGAGTCGTCCCAGACTCCCTGGGTCAGTTGAGTAGTCTGCAATACCTGAGGCTGAACAACAATAGCTTGTCTGGGGTTTTCCCTGTGTCTTTAGCCAAAATCCCTGCGCTTGCTTTCTTGGACTTGTCTTATAACAATCTTAGTGGACCAATACCCAAATTCCCAGCCAGAACTTTCAATGTTGTCGGAAACCCACTGATTTGTGGAAGCAGCTCCACAGAAGGATGCTCTGGATCAGCCCCTGTCCCTCTTTCGTTATCACTAAAACCATCACCTGGAAAAAACAAGTCCAAGATAGTAGCAATTGCACTTGGGGTGAGCTTCAGTTGTGCCTTTCTCATGCTCCTATCACTTGGAATCCTCTGGTACAGAAAGAAGCAGAAGAGCCAAACCATTCTGAACATCAGTGACATTCAAGAAGAGGGACTTGTGAGCTTAGGCAACCTCAGAAACTTCACTTTCAAAGAGCTTCAAGTTGCCACGGACCATTTTAGCTCCAAGAACATACTGGGTGCTGGAGGTTTTGGGAATGTGTACAAGGGAAAGCTAGGGGATGGGACTATGGTGGCAGTGAAACGACTCAAGGATGTAACAGGAACAGCTGGAGAGTCACAATTTAGGACAGAATTAGAGATGATAAGCCTAGCAGTGCACCGGAATTTGCTTCGGTTAATTGGATATTGTGCTACTTCTAATGAGAGGCTTCTGGTGTACCCGTACATGTCCAATGGCAGTGTCGCCTTCAGGCTTAGAGTCACAACAGGAAAGCCAGCACTAGATTGGAACACAAGGAAGAGAATAGCAATTGGAGCTGCTAGAGGTCTTCTGTATCTACATGAGCAATGTGATCCAAAGATTATACACAGAGACGTGAAGGCTGCAAATGTGCTCCTAGATGACTACTGCGAGGCAATTGTTGGTGATTTTGGCCTTGCAAAGCTCCTCGACCATGCTGATTCTCATGTGACCACTGCTGTCCGTGGGACTGTTGGGCATATTGCACCAGAATACCTTTCTACTGGTCAATCATCTGAAAAAACTGATGTTTTTGGATTTGGCATTCTCTTGATAGAGCTCATAACTGGGATGAGAGCTCTGGAGTTTGGCAAAACAGTTAATCAGAAAGGAGCCATGCTTGAGTGGGTGAAGACAGTACAACAAGAAAAGAAAGTGGAGCTCTTGGTGGATAGAGAACTGGGGAACAATTACGATCGGATTGAGGTTGGTGAAATGCTGCAAGTGGCTTTGCTATGCACTCAATACCTACCAGCTCACCGCCCCAAGATGTCGGAAGTGGTCCGGATGCTTGAAGGTGATGGACTAGCGGAGAAGTGGGCAGCGTCACATAATCAAAGTAAATCCAACATTGACCTCTTCCATACTCACAACAGTAGCAAAAGCACTCCCCACAGTACTTGGAATGCATCCAAACATGATGGCAGTGAACGCATGTTTGGCACATCTATGGATGAGGATGATGATGAGCATTCCTTGGATTCCTATGCCATGGAACTCTCTGGTCCCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004713 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009987 GO:0010150 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018108 GO:0018193 GO:0018212 GO:0019199 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0090693 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

578

Amino Acids

62.78

Weight (kDa)

8.28

Isoelectric Point (pI)

36.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	25 - 110	5.4e-10	Leucine-rich repeat region
LRR_4	PF12799	32 - 67	7.9e-07	Leucine Rich repeats (2 copies)
LRR_8	PF13855	56 - 116	1.3e-13	Leucine rich repeat
Pkinase	PF00069	234 - 501	5.7e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	236 - 505	5.8e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014140)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23950 AT4G30520
fragaria_vesca	FvH4_4g08870 FvH4_4g08870
malus_domestica	MD16G1259200.v1.1
prunus_persica	Prupe.1G100800_v2.0.a1
pyrus_communis	pycom16g22670
rosa_chinensis	RchiOBHm_Chr4g0405301
rosa_laevigata	RLG00000008859
rosa_multiflora	Rmu_sc0000161.1_g000017
rosa_roxburghii	Rroxscaffold_5G00349670
rosa_rugosa	Rorug04G0057100 Rorug04G0057200
rosa_samantha	Rh4AG130600 Rh4CG137500 Rh4DG124000
rosa_wichuraiana	Rw4G010570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	339
AccB7I	CCANNNNNTGG	1 cut(s)	482
AccIII	TCCGGA	1 cut(s)	1506
AciI	CCGC	4 cut(s)	77, 149, 1483, 1532
AclWI	GGATC	2 cut(s)	448, 1049
AcsI	RAATTY	2 cut(s)	365, 865
AcuI	CTGAAG	2 cut(s)	514, 934
AfaI	GTAC	7 cut(s)	160, 575, 743, 920, 926, 1362, 1621
AfiI	CCNNNNNNNGG	2 cut(s)	198, 482
AflIII	ACRYGT	1 cut(s)	927
AgsI	TTSAA	6 cut(s)	176, 385, 623, 670, 680, 1517
AjiI	CACGTC	1 cut(s)	1078
AjnI	CCWGG	2 cut(s)	225, 481
AjuI	GAANNNNNNNTTGG	4 cut(s)	185, 217, 1644, 1676
Alw21I	GWGCWC	7 cut(s)	46, 156, 861, 1098, 1284, 1303, 1386
Alw26I	GTCTC	2 cut(s)	60, 1068
Alw44I	GTGCAC	1 cut(s)	857
AlwI	GGATC	2 cut(s)	448, 1049
AlwNI	CAGNNNCTG	1 cut(s)	449
Ama87I	CYCGRG	1 cut(s)	205
Aor13HI	TCCGGA	1 cut(s)	1506
AoxI	GGCC	2 cut(s)	34, 1135
ApaLI	GTGCAC	1 cut(s)	857
ApeKI	GCWGC	6 cut(s)	115, 417, 1019, 1085, 1441, 1544
ApoI	RAATTY	2 cut(s)	365, 865
AspA2I	CCTAGG	1 cut(s)	37
AspLEI	GCGC	1 cut(s)	316
AspS9I	GGNCC	4 cut(s)	353, 691, 1504, 1727
AsuHPI	GGTGA	7 cut(s)	471, 535, 1139, 1363, 1445, 1472, 1532
AvaI	CYCGRG	1 cut(s)	205
AvaII	GGWCC	4 cut(s)	353, 691, 1504, 1727
AvrII	CCTAGG	1 cut(s)	37
AxyI	CCTNAGG	1 cut(s)	254
BaeGI	GKGCMC	1 cut(s)	861
BanII	GRGCYC	5 cut(s)	46, 156, 1284, 1303, 1386
BbsI	GAAGAC	2 cut(s)	1022, 1361
Bbv12I	GWGCWC	7 cut(s)	46, 156, 861, 1098, 1284, 1303, 1386
BbvI	GCAGC	6 cut(s)	102, 429, 1006, 1072, 1428, 1556
BccI	CCATC	4 cut(s)	484, 755, 1517, 1637
BciT130I	CCWGG	2 cut(s)	227, 483
BclI	TGATCA	1 cut(s)	3
BcoDI	GTCTC	2 cut(s)	60, 1068
BfaI	CTAG	8 cut(s)	38, 182, 755, 851, 983, 1023, 1100, 1529
BfmI	CTRYAG	2 cut(s)	81, 116
BglII	AGATCT	1 cut(s)	184
BisI	GCNGC	7 cut(s)	78, 116, 418, 1020, 1086, 1442, 1545
BlnI	CCTAGG	1 cut(s)	37
BlsI	GCNGC	7 cut(s)	79, 117, 419, 1021, 1087, 1443, 1546
BmcAI	AGTACT	1 cut(s)	1621
Bme1390I	CCNGG	2 cut(s)	227, 483
Bme18I	GGWCC	4 cut(s)	353, 691, 1504, 1727
BmeT110I	CYCGRG	1 cut(s)	205
BmgBI	CACGTC	1 cut(s)	1078
BmgT120I	GGNCC	4 cut(s)	353, 691, 1504, 1727
BmiI	GGNNCC	2 cut(s)	1336, 1729
BmrFI	CCNGG	2 cut(s)	227, 483
BmrI	ACTGGG	3 cut(s)	725, 1299, 1412
BmsI	GCATC	3 cut(s)	422, 1500, 1640
BmuI	ACTGGG	3 cut(s)	725, 1299, 1412
BpiI	GAAGAC	2 cut(s)	1022, 1361
BpmI	CTGGAG	3 cut(s)	744, 831, 1325
Bpu10I	CCTNAGC	1 cut(s)	643
BpuEI	CTTGAG	2 cut(s)	773, 1364
BsaJI	CCNNGG	7 cut(s)	37, 225, 226, 687, 1186, 1698, 1713
BsaWI	WCCGGW	2 cut(s)	861, 1506
Bsc4I	CCNNNNNNNGG	2 cut(s)	198, 482
Bse1I	ACTGG	5 cut(s)	52, 720, 1231, 1294, 1407
Bse21I	CCTNAGG	1 cut(s)	254
Bse3DI	GCAATG	1 cut(s)	1055
BseAI	TCCGGA	1 cut(s)	1506
BseBI	CCWGG	2 cut(s)	227, 483
BseDI	CCNNGG	7 cut(s)	37, 225, 226, 687, 1186, 1698, 1713
BseGI	GGATG	8 cut(s)	437, 766, 799, 1299, 1515, 1631, 1681, 1687
BseLI	CCNNNNNNNGG	2 cut(s)	198, 482
BseMI	GCAATG	1 cut(s)	1055
BseMII	CTCAG	3 cut(s)	9, 245, 667
BseNI	ACTGG	5 cut(s)	52, 720, 1231, 1294, 1407
BseRI	GAGGAG	1 cut(s)	1139
BseSI	GKGCMC	1 cut(s)	861
BseXI	GCAGC	6 cut(s)	102, 429, 1006, 1072, 1428, 1556
BseYI	CCCAGC	2 cut(s)	145, 370
Bsh1285I	CGRYCG	1 cut(s)	1420
BshFI	GGCC	2 cut(s)	36, 1137
BsiEI	CGRYCG	1 cut(s)	1420
BsiHKAI	GWGCWC	7 cut(s)	46, 156, 861, 1098, 1284, 1303, 1386
BsiHKCI	CYCGRG	1 cut(s)	205
BsiSI	CCGG	2 cut(s)	862, 1507
BslFI	GGGAC	6 cut(s)	200, 437, 645, 778, 1204, 1713
BslI	CCNNNNNNNGG	2 cut(s)	198, 482
BsmAI	GTCTC	2 cut(s)	60, 1068
BsmBI	CGTCTC	1 cut(s)	1068
BsmFI	GGGAC	6 cut(s)	200, 437, 645, 778, 1204, 1713
BsmI	GAATGC	3 cut(s)	1266, 1633, 1693
BsnI	GGCC	2 cut(s)	36, 1137
BsoBI	CYCGRG	1 cut(s)	205
Bsp1286I	GDGCHC	7 cut(s)	46, 156, 861, 1098, 1284, 1303, 1386
Bsp13I	TCCGGA	1 cut(s)	1506
Bsp1407I	TGTACA	1 cut(s)	741
Bsp143I	GATC	5 cut(s)	3, 184, 440, 1054, 1417
Bsp19I	CCATGG	1 cut(s)	1713
BspACI	CCGC	4 cut(s)	77, 149, 1483, 1532
BspANI	GGCC	2 cut(s)	36, 1137
BspCNI	CTCAG	3 cut(s)	10, 246, 666
BspEI	TCCGGA	1 cut(s)	1506
BspLI	GGNNCC	2 cut(s)	1336, 1729
BspMAI	CTGCAG	1 cut(s)	120
BspPI	GGATC	2 cut(s)	448, 1049
BspQI	GCTCTTC	1 cut(s)	584
BsrDI	GCAATG	1 cut(s)	1055
BsrGI	TGTACA	1 cut(s)	741
BsrI	ACTGG	5 cut(s)	52, 720, 1231, 1294, 1407
BssECI	CCNNGG	7 cut(s)	37, 225, 226, 687, 1186, 1698, 1713
BssMI	GATC	5 cut(s)	3, 184, 440, 1054, 1417
BssT1I	CCWWGG	3 cut(s)	37, 1698, 1713
Bst2UI	CCWGG	2 cut(s)	227, 483
Bst4CI	ACNGT	5 cut(s)	1195, 1321, 1360, 1598, 1619
Bst6I	CTCTTC	5 cut(s)	168, 584, 621, 995, 1586
BstAUI	TGTACA	1 cut(s)	741
BstC8I	GCNNGC	2 cut(s)	318, 978
BstDEI	CTNAG	6 cut(s)	18, 254, 347, 643, 653, 956
BstDSI	CCRYGG	3 cut(s)	687, 1186, 1713
BstF5I	GGATG	8 cut(s)	437, 766, 799, 1299, 1515, 1631, 1681, 1687
BstHHI	GCGC	1 cut(s)	316
BstKTI	GATC	5 cut(s)	6, 187, 443, 1057, 1420
BstMAI	GTCTC	2 cut(s)	60, 1068
BstMBI	GATC	5 cut(s)	3, 184, 440, 1054, 1417
BstMCI	CGRYCG	1 cut(s)	1420
BstMWI	GCNNNNNNNGC	3 cut(s)	1016, 1653, 1662
BstNI	CCWGG	2 cut(s)	227, 483
BstNSI	RCATGY	2 cut(s)	931, 1660
BstSCI	CCNGG	2 cut(s)	225, 481
BstSFI	CTRYAG	2 cut(s)	81, 116
BstSLI	GKGCMC	1 cut(s)	861
BstV1I	GCAGC	6 cut(s)	102, 429, 1006, 1072, 1428, 1556
BstV2I	GAAGAC	2 cut(s)	1022, 1361
BstX2I	RGATCY	1 cut(s)	184
BstYI	RGATCY	1 cut(s)	184
Bsu36I	CCTNAGG	1 cut(s)	254
BsuRI	GGCC	2 cut(s)	36, 1137
BtgI	CCRYGG	3 cut(s)	687, 1186, 1713
BtrI	CACGTC	1 cut(s)	1078
BtsCI	GGATG	8 cut(s)	437, 766, 799, 1299, 1515, 1631, 1681, 1687
BtsI	GCAGTG	5 cut(s)	783, 861, 946, 1176, 1654
BtsIMutI	CAGTG	7 cut(s)	401, 619, 783, 861, 946, 1176, 1654
Cac8I	GCNNGC	2 cut(s)	318, 978
CaiI	CAGNNNCTG	1 cut(s)	449
CfoI	GCGC	1 cut(s)	316
Cfr13I	GGNCC	4 cut(s)	353, 691, 1504, 1727
CseI	GACGC	1 cut(s)	1536
Csp6I	GTAC	7 cut(s)	159, 574, 742, 919, 925, 1361, 1620
CspCI	CAANNNNNGTGG	4 cut(s)	331, 366, 1604, 1639
CviAII	CATG	9 cut(s)	547, 928, 1043, 1157, 1169, 1339, 1640, 1657, 1714
CviQI	GTAC	7 cut(s)	159, 574, 742, 919, 925, 1361, 1620
DdeI	CTNAG	6 cut(s)	18, 254, 347, 643, 653, 956
DpnI	GATC	5 cut(s)	5, 186, 442, 1056, 1419
DpnII	GATC	5 cut(s)	3, 184, 440, 1054, 1417
Eam1104I	CTCTTC	5 cut(s)	168, 584, 621, 995, 1586
EarI	CTCTTC	5 cut(s)	168, 584, 621, 995, 1586
Ecl136II	GAGCTC	5 cut(s)	44, 154, 1282, 1301, 1384
Eco130I	CCWWGG	3 cut(s)	37, 1698, 1713
Eco147I	AGGCCT	1 cut(s)	36
Eco24I	GRGCYC	5 cut(s)	46, 156, 1284, 1303, 1386
Eco47I	GGWCC	4 cut(s)	353, 691, 1504, 1727
Eco53kI	GAGCTC	5 cut(s)	44, 154, 1282, 1301, 1384
Eco57I	CTGAAG	2 cut(s)	514, 934
Eco81I	CCTNAGG	1 cut(s)	254
Eco88I	CYCGRG	1 cut(s)	205
EcoICRI	GAGCTC	5 cut(s)	44, 154, 1282, 1301, 1384
EcoRII	CCWGG	2 cut(s)	225, 481
EcoT14I	CCWWGG	3 cut(s)	37, 1698, 1713
EcoT22I	ATGCAT	1 cut(s)	1633
EcoT38I	GRGCYC	5 cut(s)	46, 156, 1284, 1303, 1386
ErhI	CCWWGG	3 cut(s)	37, 1698, 1713
Esp3I	CGTCTC	1 cut(s)	1068
FaeI	CATG	9 cut(s)	550, 931, 1046, 1160, 1172, 1342, 1643, 1660, 1717
FalI	AAGNNNNNCTT	2 cut(s)	618, 650
FaqI	GGGAC	6 cut(s)	200, 437, 645, 778, 1204, 1713
FatI	CATG	9 cut(s)	546, 927, 1042, 1156, 1168, 1338, 1639, 1656, 1713
FbaI	TGATCA	1 cut(s)	3
Fnu4HI	GCNGC	7 cut(s)	78, 116, 418, 1020, 1086, 1442, 1545
FokI	GGATG	8 cut(s)	444, 773, 806, 1306, 1522, 1618, 1688, 1694
FriOI	GRGCYC	5 cut(s)	46, 156, 1284, 1303, 1386
Fsp4HI	GCNGC	7 cut(s)	78, 116, 418, 1020, 1086, 1442, 1545
FspBI	CTAG	8 cut(s)	38, 182, 755, 851, 983, 1023, 1100, 1529
GlaI	GCGC	1 cut(s)	315
GluI	GCNGC	7 cut(s)	78, 116, 418, 1020, 1086, 1442, 1545
GsaI	CCCAGC	2 cut(s)	149, 374
GsuI	CTGGAG	3 cut(s)	744, 831, 1325
HaeIII	GGCC	2 cut(s)	36, 1137
HapII	CCGG	2 cut(s)	862, 1507
HgaI	GACGC	1 cut(s)	1536
HhaI	GCGC	1 cut(s)	316
Hin1II	CATG	9 cut(s)	550, 931, 1046, 1160, 1172, 1342, 1643, 1660, 1717
Hin6I	GCGC	1 cut(s)	314
HinP1I	GCGC	1 cut(s)	314
HindIII	AAGCTT	1 cut(s)	170
HinfI	GANTC	8 cut(s)	210, 221, 564, 786, 815, 960, 1163, 1703
HpaII	CCGG	2 cut(s)	862, 1507
HphI	GGTGA	7 cut(s)	471, 535, 1139, 1363, 1445, 1472, 1532
Hpy166II	GTNNAC	6 cut(s)	140, 353, 742, 859, 919, 1652
Hpy188I	TCNGA	8 cut(s)	19, 395, 606, 656, 1240, 1329, 1422, 1498
Hpy188III	TCNNGA	8 cut(s)	63, 182, 207, 438, 623, 1273, 1304, 1507
Hpy8I	GTNNAC	6 cut(s)	140, 353, 742, 859, 919, 1652
HpyAV	CCTTC	4 cut(s)	422, 958, 1075, 1511
HpyCH4III	ACNGT	5 cut(s)	1195, 1321, 1360, 1598, 1619
HpyCH4IV	ACGT	1 cut(s)	1077
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1016, 1653, 1662
HpyF3I	CTNAG	6 cut(s)	18, 254, 347, 643, 653, 956
HpySE526I	ACGT	1 cut(s)	1077
Hsp92II	CATG	9 cut(s)	550, 931, 1046, 1160, 1172, 1342, 1643, 1660, 1717
HspAI	GCGC	1 cut(s)	314
Kpn2I	TCCGGA	1 cut(s)	1506
Ksp22I	TGATCA	1 cut(s)	3
Kzo9I	GATC	5 cut(s)	3, 184, 440, 1054, 1417
LguI	GCTCTTC	1 cut(s)	584
Lsp1109I	GCAGC	6 cut(s)	102, 429, 1006, 1072, 1428, 1556
LweI	GCATC	3 cut(s)	422, 1500, 1640
MaeI	CTAG	8 cut(s)	38, 182, 755, 851, 983, 1023, 1100, 1529
MaeII	ACGT	1 cut(s)	1077
MaeIII	GTNAC	6 cut(s)	614, 796, 816, 961, 1171, 1548
MalI	GATC	5 cut(s)	5, 186, 442, 1056, 1419
MboI	GATC	5 cut(s)	3, 184, 440, 1054, 1417
MboII	GAAGA	8 cut(s)	92, 155, 601, 638, 1012, 1022, 1366, 1573
MfeI	CAATTG	3 cut(s)	510, 1011, 1119
MflI	RGATCY	1 cut(s)	184
MhlI	GDGCHC	7 cut(s)	46, 156, 861, 1098, 1284, 1303, 1386
MluCI	AATT	9 cut(s)	365, 510, 821, 833, 865, 879, 1011, 1119, 1411
MlyI	GAGTC	5 cut(s)	215, 219, 780, 824, 969
MmeI	TCCRAC	3 cut(s)	373, 1476, 1593
Mph1103I	ATGCAT	1 cut(s)	1633
MroI	TCCGGA	1 cut(s)	1506
MseI	TTAA	3 cut(s)	71, 878, 1323
MslI	CAYNNNNRTG	1 cut(s)	1670
MspA1I	CMGCKG	2 cut(s)	149, 809
MspI	CCGG	2 cut(s)	862, 1507
MspR9I	CCNGG	2 cut(s)	227, 483
MunI	CAATTG	3 cut(s)	510, 1011, 1119
Mva1269I	GAATGC	3 cut(s)	1266, 1633, 1693
MvaI	CCWGG	2 cut(s)	227, 483
MwoI	GCNNNNNNNGC	3 cut(s)	1016, 1653, 1662
NcoI	CCATGG	1 cut(s)	1713
NdeII	GATC	5 cut(s)	3, 184, 440, 1054, 1417
NlaIII	CATG	9 cut(s)	550, 931, 1046, 1160, 1172, 1342, 1643, 1660, 1717
NlaIV	GGNNCC	2 cut(s)	1336, 1729
NmuCI	GTSAC	5 cut(s)	614, 816, 961, 1171, 1548
NsiI	ATGCAT	1 cut(s)	1633
NspI	RCATGY	2 cut(s)	931, 1660
PasI	CCCWGGG	1 cut(s)	226
PceI	AGGCCT	1 cut(s)	36
PciI	ACATGT	1 cut(s)	927
PciSI	GCTCTTC	1 cut(s)	584
PctI	GAATGC	3 cut(s)	1266, 1633, 1693
PfeI	GAWTC	3 cut(s)	564, 1163, 1703
PflMI	CCANNNNNTGG	1 cut(s)	482
PkrI	GCNGC	7 cut(s)	79, 117, 419, 1021, 1087, 1443, 1546
Ple19I	CGATCG	1 cut(s)	1420
PleI	GAGTC	5 cut(s)	215, 218, 780, 823, 968
PpsI	GAGTC	5 cut(s)	215, 218, 780, 823, 968
PscI	ACATGT	1 cut(s)	927
PsiI	TTATAA	1 cut(s)	339
Psp124BI	GAGCTC	5 cut(s)	46, 156, 1284, 1303, 1386
Psp6I	CCWGG	2 cut(s)	225, 481
PspFI	CCCAGC	2 cut(s)	145, 370
PspGI	CCWGG	2 cut(s)	225, 481
PspN4I	GGNNCC	2 cut(s)	1336, 1729
PspPI	GGNCC	4 cut(s)	353, 691, 1504, 1727
PstI	CTGCAG	1 cut(s)	120
PstNI	CAGNNNCTG	1 cut(s)	449
PsuI	RGATCY	1 cut(s)	184
PvuI	CGATCG	1 cut(s)	1420
PvuII	CAGCTG	1 cut(s)	809
RsaI	GTAC	7 cut(s)	160, 575, 743, 920, 926, 1362, 1621
RsaNI	GTAC	7 cut(s)	159, 574, 742, 919, 925, 1361, 1620
RseI	CAYNNNNRTG	1 cut(s)	1670
SacI	GAGCTC	5 cut(s)	46, 156, 1284, 1303, 1386
SapI	GCTCTTC	1 cut(s)	584
SaqAI	TTAA	3 cut(s)	71, 878, 1323
SatI	GCNGC	7 cut(s)	78, 116, 418, 1020, 1086, 1442, 1545
Sau3AI	GATC	5 cut(s)	3, 184, 440, 1054, 1417
Sau96I	GGNCC	4 cut(s)	353, 691, 1504, 1727
ScaI	AGTACT	1 cut(s)	1621
SchI	GAGTC	5 cut(s)	215, 219, 780, 824, 969
ScrFI	CCNGG	2 cut(s)	227, 483
SduI	GDGCHC	7 cut(s)	46, 156, 861, 1098, 1284, 1303, 1386
SfaNI	GCATC	3 cut(s)	422, 1500, 1640
SfcI	CTRYAG	2 cut(s)	81, 116
SinI	GGWCC	4 cut(s)	353, 691, 1504, 1727
SmiMI	CAYNNNNRTG	1 cut(s)	1670
SmlI	CTYRAG	2 cut(s)	788, 1343
SmoI	CTYRAG	2 cut(s)	788, 1343
Sse9I	AATT	9 cut(s)	365, 510, 821, 833, 865, 879, 1011, 1119, 1411
SseBI	AGGCCT	1 cut(s)	36
SsiI	CCGC	4 cut(s)	77, 149, 1483, 1532
SspMI	CTAG	8 cut(s)	38, 182, 755, 851, 983, 1023, 1100, 1529
SstI	GAGCTC	5 cut(s)	46, 156, 1284, 1303, 1386
StuI	AGGCCT	1 cut(s)	36
StyD4I	CCNGG	2 cut(s)	225, 481
StyI	CCWWGG	3 cut(s)	37, 1698, 1713
TaaI	ACNGT	5 cut(s)	1195, 1321, 1360, 1598, 1619
TaiI	ACGT	1 cut(s)	1080
TaqI	TCGA	2 cut(s)	103, 1152
TasI	AATT	9 cut(s)	365, 510, 821, 833, 865, 879, 1011, 1119, 1411
TatI	WGTACW	3 cut(s)	741, 1360, 1619
TauI	GCSGC	1 cut(s)	80
TfiI	GAWTC	3 cut(s)	564, 1163, 1703
Tru1I	TTAA	3 cut(s)	71, 878, 1323
Tru9I	TTAA	3 cut(s)	71, 878, 1323
TscAI	CASTG	7 cut(s)	408, 619, 783, 861, 946, 1183, 1654
TseFI	GTSAC	5 cut(s)	614, 816, 961, 1171, 1548
TseI	GCWGC	6 cut(s)	115, 417, 1019, 1085, 1441, 1544
Tsp45I	GTSAC	5 cut(s)	614, 816, 961, 1171, 1548
TspGWI	ACGGA	2 cut(s)	704, 1175
TspRI	CASTG	7 cut(s)	408, 619, 783, 861, 946, 1183, 1654
Van91I	CCANNNNNTGG	1 cut(s)	482
VneI	GTGCAC	1 cut(s)	857
VpaK11BI	GGWCC	4 cut(s)	353, 691, 1504, 1727
XapI	RAATTY	2 cut(s)	365, 865
XbaI	TCTAGA	1 cut(s)	181
XceI	RCATGY	2 cut(s)	931, 1660
XcmI	CCANNNNNNNNNTGG	3 cut(s)	59, 712, 984
XmaJI	CCTAGG	1 cut(s)	37
XspI	CTAG	8 cut(s)	38, 182, 755, 851, 983, 1023, 1100, 1529
ZrmI	AGTACT	1 cut(s)	1621
Zsp2I	ATGCAT	1 cut(s)	1633

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.