Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0007826

Physical Location & Seq

Genomic Coordinates Reverse (-)

14539922 .. 14546584

Gene Structure 6663 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000012009

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGGCCGTTGCGGTCGGTAATTGCTACTTTTCCGTGCTCACCTCCACCGTTAAATTACGTTCCGCCGTCTCCGCCGCCCAACCTTGCTTCTCCGCGTCGCTGTGGTCAAGTAGTAGCTGCCACACTCTTAAACCGGTTTGCCGCAGTAGCGGAGCTTCGAATTCACGGAAAGGCGATAAATCACGGTCGGAGAAAGAAGGTGTTGCTAAGAAGCTTATTGGAAACGATGACATTAGGAGTGGTAGTGGTAGAGGTAGAGGGAAGCCTGCGGCTTATAAGCCGTTTGGAACGCAGAGAAAAGAGAAGAAAGAGTCTGTAGTTGATCAAAAGGAGAAGCAGGTTGAAGCGAGAAATCTTCAGGATGCTGATTTTCTCAATGCCGTCGTTAAGGTGTATTGCACCCATACCGCTCCTGACTATTCCCTACCTTGGCAAAAGCAAAGACAATTCACAAGTACAGGCAGTGCTTTTATGATTGGTGATGGTAAACTCTTGACAAATGCCCATTGTGTTGAACATTATACTCAGGTTAAAGTGAAGAGAAGGGGAGATGATACCAAATACGTGGCTAAGGTTTTGGCCAAAGGTGTTGATTGTGATATAGCCTTACTTACAGTAGAAAGTGAGGAATTTTGGAAAGGAGCAGAGCCACTCCATTTCGGAAGCTTGCCACATCTTCAGGAAGCAGTGACTGTTGTAGGATATCCCCTTGGAGGAGATACCATTTCAGTAACGAAGGGGGTTGTATCGCGTATAGAGGTTACGTCATATGCTCATGGGTCATCTGATTTGTTGGGCATTCAGATTGATGCAGCAATAAATCCTGGTAATAGTGGTGGTCCTGCATTCAATGACCAAGGAGAGTGCATTGGTGTGGCATTTCAGGTCTACAGATCTGAAGAGGCCGAGAATATTGGATATGTGATTCCTACTACAGTTGTCTCTCACTTTTTGAGTGATTATGAGAGGAACGGAAAGTACACAGGTTTCCCTTGCCTTGGTGTTATGTTGCAAAAGTTGGAGAATCCTGCATTACGAGCATGCTTAAAAGTAGAGTCTATTGAGGGTGTACTGGTGCGAAGAGTGGAACCCACTTGTGATGCACATAATGTACTAAAGGAGGGTGACGTGATCGTAAGCTTCGATGATGTGCATGTAGGGTGTGAAGGAACAGTACCATTTCGATCAAATGAGCGCATTGCATTCCGATACCTTATTAGCCAGAAATTTGCAGGTGATGTTGCAGATCTTGGTATTATTAGAGCTGGAGAATTCATGAAAGTCAAAGCAGAGTTGAATCCACGAGTGCATTTGGTTCCTTATCATATTGATGGAGGGCAGCCCTCTTACTTAATAATTGCTGGTTTGGTGTTTACCCCACTCTCAGAACCATTAATAGACGAGGAGTGTGACGACTCTATAGGATTGAAACTTTTGGCAAAGGCACGCTACTCTTTGGCTAGATTCAAAGGAGAACAGATTGTAATCCTATCACAGGTCTTAGCAAATGAAGTAAATATAGGGTATGAAGATATGAGCAATCAACAGGTTTTGAAGTTAAATGGAACTCCAATAAAGAATATTCGTCATTTAGCGCACCTTGTAGATTCATGCAAGCACAAGTACTTGGTCTTTGAATTTGAAGACAACTACATAACAGTTCTAGAAAGAGGAGCTGCACTAGCTTCTTCAACCAGCATTCTCAAAGATTACGGGATTCCAGCTGAAAGATCTTCAGATCTGTTGGAGCCCTACATAGATTCAGTTATGGACGGCCAAGCTGACCAGGAGGATTTGGGTGACAGTCCGGTTTCAAATCTGGAAATTGGCTTTGATGGACTTATTTGGGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PDZ_2 Trypsin_2

Protein Analysis

618

Amino Acids

67.35

Weight (kDa)

5.82

Isoelectric Point (pI)

38.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Trypsin	PF00089	133 - 315	1.5e-23	Trypsin
Trypsin_2	PF13365	154 - 292	1.6e-25	Trypsin-like peptidase domain
PDZ_3	PF17815	439 - 580	3.7e-45	PDZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007826)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47940 AT2G47940
fragaria_vesca	FvH4_2g24740 FvH4_2g24740 FvH4_2g24740 FvH4_2g24740 FvH4_2g24740 FvH4_2g24740 FvH4_2g24740
malus_domestica	MD00G1056100.v1.1 MD11G1298100.v1.1
prunus_persica	Prupe.8G252400_v2.0.a1
pyrus_communis	pycom11g26180
rosa_chinensis	RchiOBHm_Chr6g0292561
rosa_laevigata	RLG00000012009
rosa_multiflora	Rmu_sc0000515.1_g000002
rosa_roxburghii	Rroxscaffold_7G00174930
rosa_rugosa	Rorug06G0228000 Rorug06G0228100
rosa_samantha	Rh6AG341200 Rh6BG348600 Rh6CG355500 Rh6DG341300
rosa_wichuraiana	Rw6G029720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	276
AarI	CACCTGC	1 cut(s)	1223
Acc36I	ACCTGC	2 cut(s)	328, 1223
AccBSI	CCGCTC	1 cut(s)	410
AccI	GTMKAC	1 cut(s)	888
AccII	CGCG	2 cut(s)	95, 751
AciI	CCGC	9 cut(s)	11, 63, 72, 75, 93, 142, 150, 269, 408
AcoI	YGGCCR	3 cut(s)	3, 579, 1774
AcsI	RAATTY	5 cut(s)	160, 629, 1226, 1271, 1637
AcuI	CTGAAG	4 cut(s)	341, 662, 918, 1719
AfaI	GTAC	6 cut(s)	457, 980, 1071, 1113, 1176, 1625
AfiI	CCNNNNNNNGG	4 cut(s)	429, 713, 998, 1495
AgeI	ACCGGT	1 cut(s)	133
AjiI	CACGTC	1 cut(s)	1129
AjnI	CCWGG	2 cut(s)	823, 1785
Alw21I	GWGCWC	1 cut(s)	39
Alw26I	GTCTC	2 cut(s)	73, 946
AlwNI	CAGNNNCTG	1 cut(s)	692
AoxI	GGCC	4 cut(s)	3, 579, 903, 1774
ApeKI	GCWGC	4 cut(s)	117, 812, 1339, 1676
ApoI	RAATTY	5 cut(s)	160, 629, 1226, 1271, 1637
AseI	ATTAAT	1 cut(s)	1394
AsiGI	ACCGGT	1 cut(s)	133
AspLEI	GCGC	2 cut(s)	1197, 1597
AspS9I	GGNCC	1 cut(s)	839
AsuHPI	GGTGA	5 cut(s)	31, 491, 1136, 1247, 1811
AsuII	TTCGAA	1 cut(s)	158
AvaII	GGWCC	1 cut(s)	839
BalI	TGGCCA	1 cut(s)	581
BanII	GRGCYC	1 cut(s)	1752
BarI	GAAGNNNNNNTAC	4 cut(s)	139, 171, 1158, 1190
BauI	CACGAG	1 cut(s)	1302
BbsI	GAAGAC	1 cut(s)	1650
Bbv12I	GWGCWC	1 cut(s)	39
BbvI	GCAGC	4 cut(s)	104, 824, 1351, 1663
BccI	CCATC	3 cut(s)	476, 1325, 1829
BceAI	ACGGC	4 cut(s)	50, 265, 365, 1789
BciT130I	CCWGG	2 cut(s)	825, 1787
BclI	TGATCA	1 cut(s)	322
BcoDI	GTCTC	2 cut(s)	73, 946
BfaI	CTAG	3 cut(s)	1461, 1664, 1682
BfmI	CTRYAG	4 cut(s)	315, 889, 933, 1419
BfuAI	ACCTGC	2 cut(s)	328, 1223
BglII	AGATCT	4 cut(s)	893, 1246, 1730, 1738
BisI	GCNGC	7 cut(s)	75, 118, 142, 270, 813, 1340, 1677
BlsI	GCNGC	7 cut(s)	76, 119, 143, 271, 814, 1341, 1678
BmcAI	AGTACT	1 cut(s)	1625
Bme1390I	CCNGG	2 cut(s)	825, 1787
Bme18I	GGWCC	1 cut(s)	839
BmgBI	CACGTC	1 cut(s)	1129
BmgT120I	GGNCC	1 cut(s)	839
BmiI	GGNNCC	3 cut(s)	1089, 1317, 1749
BmrFI	CCNGG	2 cut(s)	825, 1787
BmsI	GCATC	3 cut(s)	352, 799, 1090
BpiI	GAAGAC	1 cut(s)	1650
BpmI	CTGGAG	1 cut(s)	1287
Bpu10I	CCTNAGC	1 cut(s)	570
Bpu14I	TTCGAA	1 cut(s)	158
BsaAI	YACGTR	1 cut(s)	565
BsaBI	GATNNNNATC	1 cut(s)	1484
BsaJI	CCNNGG	4 cut(s)	428, 709, 856, 997
BsaWI	WCCGGW	2 cut(s)	133, 1807
BsaXI	ACNNNNNCTCC	2 cut(s)	229, 259
Bsc4I	CCNNNNNNNGG	4 cut(s)	429, 713, 998, 1495
Bse118I	RCCGGY	1 cut(s)	133
Bse1I	ACTGG	1 cut(s)	1077
Bse3DI	GCAATG	1 cut(s)	1197
Bse8I	GATNNNNATC	1 cut(s)	1484
BseBI	CCWGG	2 cut(s)	825, 1787
BseDI	CCNNGG	4 cut(s)	428, 709, 856, 997
BseGI	GGATG	1 cut(s)	367
BseJI	GATNNNNATC	1 cut(s)	1484
BseLI	CCNNNNNNNGG	4 cut(s)	429, 713, 998, 1495
BseMI	GCAATG	1 cut(s)	1197
BseMII	CTCAG	2 cut(s)	539, 1398
BseNI	ACTGG	1 cut(s)	1077
BseRI	GAGGAG	3 cut(s)	729, 1418, 1686
BseXI	GCAGC	4 cut(s)	104, 824, 1351, 1663
BsgI	GTGCAG	1 cut(s)	1662
Bsh1236I	CGCG	2 cut(s)	95, 751
Bsh1285I	CGRYCG	2 cut(s)	15, 188
BshFI	GGCC	4 cut(s)	5, 581, 905, 1776
BshTI	ACCGGT	1 cut(s)	133
BsiEI	CGRYCG	2 cut(s)	15, 188
BsiHKAI	GWGCWC	1 cut(s)	39
BsiSI	CCGG	2 cut(s)	134, 1808
BslI	CCNNNNNNNGG	4 cut(s)	429, 713, 998, 1495
BsmAI	GTCTC	2 cut(s)	73, 946
BsmBI	CGTCTC	1 cut(s)	73
BsmI	GAATGC	4 cut(s)	798, 845, 1202, 1698
BsnI	GGCC	4 cut(s)	5, 581, 905, 1776
Bsp119I	TTCGAA	1 cut(s)	158
Bsp1286I	GDGCHC	2 cut(s)	39, 1752
Bsp143I	GATC	7 cut(s)	322, 893, 1131, 1184, 1246, 1730, 1738
BspACI	CCGC	9 cut(s)	11, 63, 72, 75, 93, 142, 150, 269, 408
BspANI	GGCC	4 cut(s)	5, 581, 905, 1776
BspCNI	CTCAG	2 cut(s)	538, 1397
BspFNI	CGCG	2 cut(s)	95, 751
BspHI	TCATGA	1 cut(s)	1275
BspLI	GGNNCC	3 cut(s)	1089, 1317, 1749
BspMI	ACCTGC	2 cut(s)	328, 1223
BspT104I	TTCGAA	1 cut(s)	158
BsrBI	CCGCTC	1 cut(s)	410
BsrDI	GCAATG	1 cut(s)	1197
BsrFI	RCCGGY	1 cut(s)	133
BsrI	ACTGG	1 cut(s)	1077
BssAI	RCCGGY	1 cut(s)	133
BssECI	CCNNGG	4 cut(s)	428, 709, 856, 997
BssMI	GATC	7 cut(s)	322, 893, 1131, 1184, 1246, 1730, 1738
BssSI	CACGAG	1 cut(s)	1302
BssT1I	CCWWGG	4 cut(s)	428, 709, 856, 997
Bst2BI	CACGAG	1 cut(s)	1302
Bst2UI	CCWGG	2 cut(s)	825, 1787
Bst4CI	ACNGT	8 cut(s)	49, 186, 616, 694, 937, 1174, 1660, 1805
Bst6I	CTCTTC	3 cut(s)	533, 894, 1075
BstBAI	YACGTR	1 cut(s)	565
BstBI	TTCGAA	1 cut(s)	158
BstC8I	GCNNGC	5 cut(s)	267, 668, 1042, 1447, 1616
BstDEI	CTNAG	5 cut(s)	207, 525, 570, 1384, 1501
BstENI	CCTNNNNNAGG	1 cut(s)	1493
BstF5I	GGATG	1 cut(s)	367
BstFNI	CGCG	2 cut(s)	95, 751
BstHHI	GCGC	2 cut(s)	1197, 1597
BstKTI	GATC	7 cut(s)	325, 896, 1134, 1187, 1249, 1733, 1741
BstMAI	GTCTC	2 cut(s)	73, 946
BstMBI	GATC	7 cut(s)	322, 893, 1131, 1184, 1246, 1730, 1738
BstMCI	CGRYCG	2 cut(s)	15, 188
BstMWI	GCNNNNNNNGC	4 cut(s)	71, 147, 1037, 1682
BstNI	CCWGG	2 cut(s)	825, 1787
BstNSI	RCATGY	2 cut(s)	1044, 1157
BstSCI	CCNGG	2 cut(s)	823, 1785
BstSFI	CTRYAG	4 cut(s)	315, 889, 933, 1419
BstUI	CGCG	2 cut(s)	95, 751
BstV1I	GCAGC	4 cut(s)	104, 824, 1351, 1663
BstV2I	GAAGAC	1 cut(s)	1650
BstX2I	RGATCY	4 cut(s)	893, 1246, 1730, 1738
BstXI	CCANNNNNNTGG	1 cut(s)	565
BstYI	RGATCY	4 cut(s)	893, 1246, 1730, 1738
BsuRI	GGCC	4 cut(s)	5, 581, 905, 1776
BtrI	CACGTC	1 cut(s)	1129
BtsCI	GGATG	1 cut(s)	367
BtsI	GCAGTG	2 cut(s)	469, 693
BtsIMutI	CAGTG	2 cut(s)	469, 693
BveI	ACCTGC	2 cut(s)	328, 1223
Cac8I	GCNNGC	5 cut(s)	267, 668, 1042, 1447, 1616
CaiI	CAGNNNCTG	1 cut(s)	692
CciI	TCATGA	1 cut(s)	1275
CfoI	GCGC	2 cut(s)	1197, 1597
Cfr10I	RCCGGY	1 cut(s)	133
Cfr13I	GGNCC	1 cut(s)	839
CseI	GACGC	1 cut(s)	84
Csp6I	GTAC	6 cut(s)	456, 979, 1070, 1112, 1175, 1624
CspAI	ACCGGT	1 cut(s)	133
CviAII	CATG	5 cut(s)	776, 1041, 1154, 1276, 1611
CviQI	GTAC	6 cut(s)	456, 979, 1070, 1112, 1175, 1624
DdeI	CTNAG	5 cut(s)	207, 525, 570, 1384, 1501
DpnI	GATC	7 cut(s)	324, 895, 1133, 1186, 1248, 1732, 1740
DpnII	GATC	7 cut(s)	322, 893, 1131, 1184, 1246, 1730, 1738
EaeI	YGGCCR	3 cut(s)	3, 579, 1774
Eam1104I	CTCTTC	3 cut(s)	533, 894, 1075
EarI	CTCTTC	3 cut(s)	533, 894, 1075
EciI	GGCGGA	2 cut(s)	52, 61
Eco130I	CCWWGG	4 cut(s)	428, 709, 856, 997
Eco24I	GRGCYC	1 cut(s)	1752
Eco32I	GATATC	1 cut(s)	704
Eco47I	GGWCC	1 cut(s)	839
Eco57I	CTGAAG	4 cut(s)	341, 662, 918, 1719
EcoNI	CCTNNNNNAGG	1 cut(s)	1493
EcoRI	GAATTC	2 cut(s)	160, 1271
EcoRII	CCWGG	2 cut(s)	823, 1785
EcoRV	GATATC	1 cut(s)	704
EcoT14I	CCWWGG	4 cut(s)	428, 709, 856, 997
EcoT38I	GRGCYC	1 cut(s)	1752
ErhI	CCWWGG	4 cut(s)	428, 709, 856, 997
Esp3I	CGTCTC	1 cut(s)	73
FaeI	CATG	5 cut(s)	779, 1044, 1157, 1279, 1614
FatI	CATG	5 cut(s)	775, 1040, 1153, 1275, 1610
FauNDI	CATATG	1 cut(s)	769
FbaI	TGATCA	1 cut(s)	322
FblI	GTMKAC	1 cut(s)	888
Fnu4HI	GCNGC	7 cut(s)	75, 118, 142, 270, 813, 1340, 1677
FokI	GGATG	1 cut(s)	374
FriOI	GRGCYC	1 cut(s)	1752
Fsp4HI	GCNGC	7 cut(s)	75, 118, 142, 270, 813, 1340, 1677
FspBI	CTAG	3 cut(s)	1461, 1664, 1682
GlaI	GCGC	2 cut(s)	1196, 1596
GluI	GCNGC	7 cut(s)	75, 118, 142, 270, 813, 1340, 1677
GsuI	CTGGAG	1 cut(s)	1287
HaeIII	GGCC	4 cut(s)	5, 581, 905, 1776
HapII	CCGG	2 cut(s)	134, 1808
HgaI	GACGC	1 cut(s)	84
HhaI	GCGC	2 cut(s)	1197, 1597
Hin1II	CATG	5 cut(s)	779, 1044, 1157, 1279, 1614
Hin6I	GCGC	2 cut(s)	1195, 1595
HinP1I	GCGC	2 cut(s)	1195, 1595
HindIII	AAGCTT	3 cut(s)	212, 664, 1138
HpaII	CCGG	2 cut(s)	134, 1808
HphI	GGTGA	5 cut(s)	31, 491, 1136, 1247, 1811
Hpy166II	GTNNAC	5 cut(s)	488, 889, 981, 1070, 1374
Hpy188I	TCNGA	8 cut(s)	190, 662, 787, 804, 898, 1208, 1387, 1738
Hpy188III	TCNNGA	7 cut(s)	359, 413, 493, 680, 1276, 1664, 1820
Hpy8I	GTNNAC	5 cut(s)	488, 889, 981, 1070, 1374
Hpy99I	CGWCG	2 cut(s)	100, 386
HpyAV	CCTTC	4 cut(s)	191, 537, 730, 1160
HpyCH4III	ACNGT	8 cut(s)	49, 186, 616, 694, 937, 1174, 1660, 1805
HpyCH4IV	ACGT	4 cut(s)	58, 564, 764, 1128
HpyF10VI	GCNNNNNNNGC	4 cut(s)	71, 147, 1037, 1682
HpyF3I	CTNAG	5 cut(s)	207, 525, 570, 1384, 1501
HpySE526I	ACGT	4 cut(s)	58, 564, 764, 1128
Hsp92II	CATG	5 cut(s)	779, 1044, 1157, 1279, 1614
HspAI	GCGC	2 cut(s)	1195, 1595
Ksp22I	TGATCA	1 cut(s)	322
Kzo9I	GATC	7 cut(s)	322, 893, 1131, 1184, 1246, 1730, 1738
LmnI	GCTCC	5 cut(s)	152, 415, 641, 1673, 1747
Lsp1109I	GCAGC	4 cut(s)	104, 824, 1351, 1663
LweI	GCATC	3 cut(s)	352, 799, 1090
MaeI	CTAG	3 cut(s)	1461, 1664, 1682
MaeII	ACGT	4 cut(s)	58, 564, 764, 1128
MaeIII	GTNAC	6 cut(s)	688, 730, 760, 1124, 1409, 1799
MalI	GATC	7 cut(s)	324, 895, 1133, 1186, 1248, 1732, 1740
MbiI	CCGCTC	1 cut(s)	410
MboI	GATC	7 cut(s)	322, 893, 1131, 1184, 1246, 1730, 1738
MflI	RGATCY	4 cut(s)	893, 1246, 1730, 1738
MhlI	GDGCHC	2 cut(s)	39, 1752
MlsI	TGGCCA	1 cut(s)	581
MluNI	TGGCCA	1 cut(s)	581
MlyI	GAGTC	3 cut(s)	320, 1064, 1409
MmeI	TCCRAC	3 cut(s)	168, 999, 1725
Mox20I	TGGCCA	1 cut(s)	581
MscI	TGGCCA	1 cut(s)	581
MseI	TTAA	9 cut(s)	51, 129, 387, 531, 1046, 1352, 1394, 1559, 1852
MslI	CAYNNNNRTG	2 cut(s)	872, 1329
Msp20I	TGGCCA	1 cut(s)	581
MspA1I	CMGCKG	1 cut(s)	1724
MspI	CCGG	2 cut(s)	134, 1808
MspR9I	CCNGG	2 cut(s)	825, 1787
Mva1269I	GAATGC	4 cut(s)	798, 845, 1202, 1698
MvaI	CCWGG	2 cut(s)	825, 1787
MvnI	CGCG	2 cut(s)	95, 751
MwoI	GCNNNNNNNGC	4 cut(s)	71, 147, 1037, 1682
NdeI	CATATG	1 cut(s)	769
NdeII	GATC	7 cut(s)	322, 893, 1131, 1184, 1246, 1730, 1738
NlaIII	CATG	5 cut(s)	779, 1044, 1157, 1279, 1614
NlaIV	GGNNCC	3 cut(s)	1089, 1317, 1749
NmeAIII	GCCGAG	1 cut(s)	931
NmuCI	GTSAC	4 cut(s)	688, 1124, 1409, 1799
NspI	RCATGY	2 cut(s)	1044, 1157
NspV	TTCGAA	1 cut(s)	158
PaeI	GCATGC	1 cut(s)	1044
PagI	TCATGA	1 cut(s)	1275
PaqCI	CACCTGC	1 cut(s)	1223
PcsI	WCGNNNNNNNCGW	1 cut(s)	1140
PctI	GAATGC	4 cut(s)	798, 845, 1202, 1698
PfeI	GAWTC	7 cut(s)	925, 1024, 1297, 1464, 1607, 1717, 1760
PinAI	ACCGGT	1 cut(s)	133
PkrI	GCNGC	7 cut(s)	76, 119, 143, 271, 814, 1341, 1678
PleI	GAGTC	3 cut(s)	319, 1063, 1409
PpsI	GAGTC	3 cut(s)	319, 1063, 1409
Ppu21I	YACGTR	1 cut(s)	565
PshBI	ATTAAT	1 cut(s)	1394
PsiI	TTATAA	1 cut(s)	276
Psp6I	CCWGG	2 cut(s)	823, 1785
PspGI	CCWGG	2 cut(s)	823, 1785
PspN4I	GGNNCC	3 cut(s)	1089, 1317, 1749
PspPI	GGNCC	1 cut(s)	839
PsrI	GAACNNNNNNTAC	2 cut(s)	962, 994
PstNI	CAGNNNCTG	1 cut(s)	692
PsuI	RGATCY	4 cut(s)	893, 1246, 1730, 1738
PvuII	CAGCTG	1 cut(s)	1724
RsaI	GTAC	6 cut(s)	457, 980, 1071, 1113, 1176, 1625
RsaNI	GTAC	6 cut(s)	456, 979, 1070, 1112, 1175, 1624
RseI	CAYNNNNRTG	2 cut(s)	872, 1329
SaqAI	TTAA	9 cut(s)	51, 129, 387, 531, 1046, 1352, 1394, 1559, 1852
SatI	GCNGC	7 cut(s)	75, 118, 142, 270, 813, 1340, 1677
Sau3AI	GATC	7 cut(s)	322, 893, 1131, 1184, 1246, 1730, 1738
Sau96I	GGNCC	1 cut(s)	839
ScaI	AGTACT	1 cut(s)	1625
SchI	GAGTC	3 cut(s)	320, 1064, 1409
ScrFI	CCNGG	2 cut(s)	825, 1787
SduI	GDGCHC	2 cut(s)	39, 1752
SfaNI	GCATC	3 cut(s)	352, 799, 1090
SfcI	CTRYAG	4 cut(s)	315, 889, 933, 1419
SfuI	TTCGAA	1 cut(s)	158
SinI	GGWCC	1 cut(s)	839
SmiMI	CAYNNNNRTG	2 cut(s)	872, 1329
SphI	GCATGC	1 cut(s)	1044
SsiI	CCGC	9 cut(s)	11, 63, 72, 75, 93, 142, 150, 269, 408
SspI	AATATT	2 cut(s)	913, 1582
SspMI	CTAG	3 cut(s)	1461, 1664, 1682
StyD4I	CCNGG	2 cut(s)	823, 1785
StyI	CCWWGG	4 cut(s)	428, 709, 856, 997
TaaI	ACNGT	8 cut(s)	49, 186, 616, 694, 937, 1174, 1660, 1805
TaiI	ACGT	4 cut(s)	61, 567, 767, 1131
TaqI	TCGA	3 cut(s)	158, 1143, 1183
TatI	WGTACW	5 cut(s)	455, 978, 1069, 1111, 1623
TauI	GCSGC	3 cut(s)	77, 144, 272
TfiI	GAWTC	7 cut(s)	925, 1024, 1297, 1464, 1607, 1717, 1760
Tru1I	TTAA	9 cut(s)	51, 129, 387, 531, 1046, 1352, 1394, 1559, 1852
Tru9I	TTAA	9 cut(s)	51, 129, 387, 531, 1046, 1352, 1394, 1559, 1852
TscAI	CASTG	2 cut(s)	469, 693
TseFI	GTSAC	4 cut(s)	688, 1124, 1409, 1799
TseI	GCWGC	4 cut(s)	117, 812, 1339, 1676
Tsp45I	GTSAC	4 cut(s)	688, 1124, 1409, 1799
TspDTI	ATGAA	5 cut(s)	1264, 1292, 1524, 1542, 1599
TspGWI	ACGGA	3 cut(s)	22, 181, 987
TspRI	CASTG	2 cut(s)	469, 693
VpaK11BI	GGWCC	1 cut(s)	839
VspI	ATTAAT	1 cut(s)	1394
XagI	CCTNNNNNAGG	1 cut(s)	1493
XapI	RAATTY	5 cut(s)	160, 629, 1226, 1271, 1637
XbaI	TCTAGA	1 cut(s)	1663
XceI	RCATGY	2 cut(s)	1044, 1157
XmiI	GTMKAC	1 cut(s)	888
XspI	CTAG	3 cut(s)	1461, 1664, 1682
ZrmI	AGTACT	1 cut(s)	1625

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.