Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0007826

Physical Location & Seq

Genomic Coordinates Forward (+)

54376360 .. 54383338

Gene Structure 6979 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG355500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1821 bp

ATGGCCGTTGCGGTCGTTAACTGCTACTTCTCCGTTCTCAGCTCCACCGTTAAATTCCCTTCCGCCGCCCAACCTTGCTTCTCCGCGTCGCTGTGTTCAAGTAGTAGCTGCCACACTCTTAAACCGGTTTGCCGCAGCAGCGGAGCTTCGAATTCACGGTCGGAGAAAGAAGGTGTTGCTAAGAAGCTTATTGGAAATGGTGAGATTAGGAGTGGTAGTGGTAGAGGGAAGCCTGGGGCTTATAAGCCGTTTGGAACGCAGAGAAGAGAGAAGAAAGAGTCTGTAGTTGATCAAAAGGAGAAGCAGGTCGAAGCGAGAAATCTTCAGGATGCTGATTTTCTCAATGCCGTCGTTAAGGTGTACTGCACCCATACCGCTCCTGACTATTCCCTTCCTTGGCAAAAGCAAAGACAATTCACAAGTACAGGCAGTGCTTTTATGATTGGTGATGGTAAACTCTTGACAAATGCCCATTGTGTTGAACATTATACTCAGGTTAAAGTGAAGAGAAGGGGAGATGATACCAAATACGTGGCTAAGGTTTTGGCCAAAGGTGTTGATTGTGATATAGCCTTACTTACAGTAGAAAGTGAGGAATTTTGGAAAGGAGCAGAGCCACTCCATTTCGGAAGCTTGCCACATCTTCAGGAAGCAGTGACTGTTGTAGGATATCCCCTTGGAGGAGATACCATTTCAGTAACGAAGGGGGTTGTATCGCGTATAGAGGTTACATCATATGCTCATGGGTCATCTGATTTGTTGGGCATTCAGATTGATGCAGCAATAAATCCTGGTAATAGTGGTGGTCCTGCATTCAATGACCAAGGAGAGTGCATTGGTGTGGCATTTCAGGTCTACAGATCTGAAGAGGCCGAGAATATTGGATATGTGATTCCTACTACAGTTGTCTCTCACTTTTTGAATGATTATGAGAGGAACGGGAAGTACACAGGTTTCCCTTGCCTTGGTGTTATGTTGCAAAAGTTGGAGAATCCTGCATTACGAGCATGCTTAAAAGTAGAGTCTATTGAGGGTGTACTGGTGCGAAGAGTAGAACCCACTTGTGATGCACATAATGTACTGAAGGAGGGTGACGTGATTGTAAGCTTCGATGATGTGCATGTAGGGTGTGAAGGAACAGTACCATTTCGATCAAACGAGCGCATTGCATTCCGCTACCTTATTAGCCAGAAATTTGCAGGTGATGTTGCAGATCTTGGTATTATTAGAGCCGGAGAATTCATGAAAGTCAAAGCAGAGTTGAACCCACGAGTGCATTTGGTGCCTTATCATATTGATGGAGGGCAGCCCTCTTACTTAATTATTGCTGGTTTGGTGTTTACCCCACTCTCAGAACCATTAATAGATGAGGAGTGTGACGACTCTATAGGATTGAAACTTTTGGCAAAGGCACGCTACTCTTTGGCTAAATTCAAAGGAGAACAGATTGTAATCCTATCACAGGTCTTAGCAAATGAAGTAAATATAGGGTATGAAGATATGAGCAATCAACAGGTTTTGAAGTTAAATGGAACTCCAATAAAGAATATTCGTCATTTAGCGCACCTTGTAGATTCATGCAAGCACAAGTACATGGTCTTTGAATTTGAAGACAACTACATAACAGTTCTAGAAAGAGAAGCTGCACTAGCTTCTTCAACCAGCATTCTCAAAGATTACGGGATTCCAGCTGAAAGATCTTCAGATCTGTTGGAGCCCTACATAGATTCAGTTGTGGGCGGCCAAGCTGACCAGGAGGATTTGGGTGACAGTCCGGTTTCAAATCTGGAAATTGGCTTTGATGGACTTATTTGGGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PDZ_2 Trypsin_2

Protein Analysis

606

Amino Acids

66.1

Weight (kDa)

5.62

Isoelectric Point (pI)

41.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Trypsin	PF00089	122 - 304	1.5e-23	Trypsin
Trypsin_2	PF13365	143 - 281	1.5e-25	Trypsin-like peptidase domain
PDZ_3	PF17815	428 - 569	7e-46	PDZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007826)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47940 AT2G47940
fragaria_vesca	FvH4_2g24740 FvH4_2g24740 FvH4_2g24740 FvH4_2g24740 FvH4_2g24740 FvH4_2g24740 FvH4_2g24740
malus_domestica	MD00G1056100.v1.1 MD11G1298100.v1.1
prunus_persica	Prupe.8G252400_v2.0.a1
pyrus_communis	pycom11g26180
rosa_chinensis	RchiOBHm_Chr6g0292561
rosa_laevigata	RLG00000012009
rosa_multiflora	Rmu_sc0000515.1_g000002
rosa_roxburghii	Rroxscaffold_7G00174930
rosa_rugosa	Rorug06G0228000 Rorug06G0228100
rosa_samantha	Rh6AG341200 Rh6BG348600 Rh6CG355500 Rh6DG341300
rosa_wichuraiana	Rw6G029720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	243
AarI	CACCTGC	1 cut(s)	1190
Acc36I	ACCTGC	2 cut(s)	295, 1190
AccB1I	GGYRCC	1 cut(s)	1282
AccBSI	CCGCTC	1 cut(s)	377
AccI	GTMKAC	1 cut(s)	855
AccII	CGCG	2 cut(s)	86, 718
AciI	CCGC	9 cut(s)	11, 63, 66, 84, 133, 141, 375, 1174, 1740
AcoI	YGGCCR	3 cut(s)	3, 546, 1741
AcsI	RAATTY	7 cut(s)	53, 151, 596, 1193, 1238, 1430, 1604
AcuI	CTGAAG	5 cut(s)	308, 629, 885, 1103, 1686
AfaI	GTAC	7 cut(s)	362, 424, 947, 1038, 1080, 1143, 1592
AfiI	CCNNNNNNNGG	4 cut(s)	396, 680, 965, 1462
AgeI	ACCGGT	1 cut(s)	124
AjiI	CACGTC	1 cut(s)	1096
AjnI	CCWGG	3 cut(s)	232, 790, 1752
Alw26I	GTCTC	1 cut(s)	913
AlwNI	CAGNNNCTG	1 cut(s)	659
AoxI	GGCC	4 cut(s)	3, 546, 870, 1741
ApeKI	GCWGC	6 cut(s)	108, 135, 138, 779, 1306, 1643
ApoI	RAATTY	7 cut(s)	53, 151, 596, 1193, 1238, 1430, 1604
ArsI	GACNNNNNNTTYG	2 cut(s)	143, 175
AseI	ATTAAT	1 cut(s)	1361
AsiGI	ACCGGT	1 cut(s)	124
AspLEI	GCGC	2 cut(s)	1164, 1564
AspS9I	GGNCC	1 cut(s)	806
AsuHPI	GGTGA	5 cut(s)	212, 458, 1103, 1214, 1778
AsuII	TTCGAA	1 cut(s)	149
AvaII	GGWCC	1 cut(s)	806
BalI	TGGCCA	1 cut(s)	548
BanI	GGYRCC	1 cut(s)	1282
BanII	GRGCYC	1 cut(s)	1719
BarI	GAAGNNNNNNTAC	2 cut(s)	1125, 1157
BauI	CACGAG	1 cut(s)	1269
BbsI	GAAGAC	1 cut(s)	1617
BbvI	GCAGC	6 cut(s)	95, 147, 150, 791, 1318, 1630
BccI	CCATC	3 cut(s)	443, 1292, 1796
BceAI	ACGGC	2 cut(s)	232, 332
BcgI	CGANNNNNNTGC	2 cut(s)	1148, 1182
BciT130I	CCWGG	3 cut(s)	234, 792, 1754
BclI	TGATCA	1 cut(s)	289
BcoDI	GTCTC	1 cut(s)	913
BfaI	CTAG	2 cut(s)	1631, 1649
BfmI	CTRYAG	4 cut(s)	282, 856, 900, 1386
BfuAI	ACCTGC	2 cut(s)	295, 1190
BglII	AGATCT	4 cut(s)	860, 1213, 1697, 1705
BisI	GCNGC	9 cut(s)	66, 109, 133, 136, 139, 780, 1307, 1644, 1741
BlsI	GCNGC	9 cut(s)	67, 110, 134, 137, 140, 781, 1308, 1645, 1742
Bme1390I	CCNGG	3 cut(s)	234, 792, 1754
Bme18I	GGWCC	1 cut(s)	806
BmgBI	CACGTC	1 cut(s)	1096
BmgT120I	GGNCC	1 cut(s)	806
BmiI	GGNNCC	2 cut(s)	1284, 1716
BmrFI	CCNGG	3 cut(s)	234, 792, 1754
BmsI	GCATC	3 cut(s)	319, 766, 1057
BpiI	GAAGAC	1 cut(s)	1617
Bpu10I	CCTNAGC	1 cut(s)	537
Bpu14I	TTCGAA	1 cut(s)	149
BsaAI	YACGTR	1 cut(s)	532
BsaBI	GATNNNNATC	1 cut(s)	1451
BsaJI	CCNNGG	5 cut(s)	233, 395, 676, 823, 964
BsaWI	WCCGGW	2 cut(s)	124, 1774
BsaXI	ACNNNNNCTCC	2 cut(s)	202, 232
Bsc4I	CCNNNNNNNGG	4 cut(s)	396, 680, 965, 1462
Bse118I	RCCGGY	1 cut(s)	124
Bse1I	ACTGG	1 cut(s)	1044
Bse3DI	GCAATG	1 cut(s)	1164
Bse8I	GATNNNNATC	1 cut(s)	1451
BseBI	CCWGG	3 cut(s)	234, 792, 1754
BseDI	CCNNGG	5 cut(s)	233, 395, 676, 823, 964
BseGI	GGATG	1 cut(s)	334
BseJI	GATNNNNATC	1 cut(s)	1451
BseLI	CCNNNNNNNGG	4 cut(s)	396, 680, 965, 1462
BseMI	GCAATG	1 cut(s)	1164
BseMII	CTCAG	3 cut(s)	52, 506, 1365
BseNI	ACTGG	1 cut(s)	1044
BseRI	GAGGAG	2 cut(s)	696, 1385
BseXI	GCAGC	6 cut(s)	95, 147, 150, 791, 1318, 1630
BsgI	GTGCAG	2 cut(s)	349, 1629
Bsh1236I	CGCG	2 cut(s)	86, 718
Bsh1285I	CGRYCG	2 cut(s)	15, 161
BshFI	GGCC	4 cut(s)	5, 548, 872, 1743
BshNI	GGYRCC	1 cut(s)	1282
BshTI	ACCGGT	1 cut(s)	124
BsiEI	CGRYCG	2 cut(s)	15, 161
BsiSI	CCGG	3 cut(s)	125, 1233, 1775
BslI	CCNNNNNNNGG	4 cut(s)	396, 680, 965, 1462
BsmAI	GTCTC	1 cut(s)	913
BsmI	GAATGC	4 cut(s)	765, 812, 1169, 1665
BsnI	GGCC	4 cut(s)	5, 548, 872, 1743
Bsp119I	TTCGAA	1 cut(s)	149
Bsp1286I	GDGCHC	1 cut(s)	1719
Bsp143I	GATC	6 cut(s)	289, 860, 1151, 1213, 1697, 1705
BspACI	CCGC	9 cut(s)	11, 63, 66, 84, 133, 141, 375, 1174, 1740
BspANI	GGCC	4 cut(s)	5, 548, 872, 1743
BspCNI	CTCAG	3 cut(s)	51, 505, 1364
BspFNI	CGCG	2 cut(s)	86, 718
BspHI	TCATGA	1 cut(s)	1242
BspLI	GGNNCC	2 cut(s)	1284, 1716
BspMI	ACCTGC	2 cut(s)	295, 1190
BspT104I	TTCGAA	1 cut(s)	149
BspT107I	GGYRCC	1 cut(s)	1282
BsrBI	CCGCTC	1 cut(s)	377
BsrDI	GCAATG	1 cut(s)	1164
BsrFI	RCCGGY	1 cut(s)	124
BsrI	ACTGG	1 cut(s)	1044
BssAI	RCCGGY	1 cut(s)	124
BssECI	CCNNGG	5 cut(s)	233, 395, 676, 823, 964
BssMI	GATC	6 cut(s)	289, 860, 1151, 1213, 1697, 1705
BssSI	CACGAG	1 cut(s)	1269
BssT1I	CCWWGG	4 cut(s)	395, 676, 823, 964
Bst2BI	CACGAG	1 cut(s)	1269
Bst2UI	CCWGG	3 cut(s)	234, 792, 1754
Bst4CI	ACNGT	8 cut(s)	49, 159, 583, 661, 904, 1141, 1627, 1772
Bst6I	CTCTTC	4 cut(s)	259, 500, 861, 1042
BstAPI	GCANNNNNTGC	1 cut(s)	1282
BstBAI	YACGTR	1 cut(s)	532
BstBI	TTCGAA	1 cut(s)	149
BstC8I	GCNNGC	4 cut(s)	635, 1009, 1414, 1583
BstDEI	CTNAG	6 cut(s)	38, 180, 492, 537, 1351, 1468
BstENI	CCTNNNNNAGG	1 cut(s)	1460
BstF5I	GGATG	1 cut(s)	334
BstFNI	CGCG	2 cut(s)	86, 718
BstHHI	GCGC	2 cut(s)	1164, 1564
BstKTI	GATC	6 cut(s)	292, 863, 1154, 1216, 1700, 1708
BstMAI	GTCTC	1 cut(s)	913
BstMBI	GATC	6 cut(s)	289, 860, 1151, 1213, 1697, 1705
BstMCI	CGRYCG	2 cut(s)	15, 161
BstMWI	GCNNNNNNNGC	4 cut(s)	138, 1004, 1282, 1649
BstNI	CCWGG	3 cut(s)	234, 792, 1754
BstNSI	RCATGY	2 cut(s)	1011, 1124
BstSCI	CCNGG	3 cut(s)	232, 790, 1752
BstSFI	CTRYAG	4 cut(s)	282, 856, 900, 1386
BstUI	CGCG	2 cut(s)	86, 718
BstV1I	GCAGC	6 cut(s)	95, 147, 150, 791, 1318, 1630
BstV2I	GAAGAC	1 cut(s)	1617
BstX2I	RGATCY	4 cut(s)	860, 1213, 1697, 1705
BstXI	CCANNNNNNTGG	1 cut(s)	532
BstYI	RGATCY	4 cut(s)	860, 1213, 1697, 1705
BsuRI	GGCC	4 cut(s)	5, 548, 872, 1743
BtrI	CACGTC	1 cut(s)	1096
BtsCI	GGATG	1 cut(s)	334
BtsI	GCAGTG	2 cut(s)	436, 660
BtsIMutI	CAGTG	2 cut(s)	436, 660
BveI	ACCTGC	2 cut(s)	295, 1190
Cac8I	GCNNGC	4 cut(s)	635, 1009, 1414, 1583
CaiI	CAGNNNCTG	1 cut(s)	659
CciI	TCATGA	1 cut(s)	1242
CfoI	GCGC	2 cut(s)	1164, 1564
Cfr10I	RCCGGY	1 cut(s)	124
Cfr13I	GGNCC	1 cut(s)	806
CseI	GACGC	1 cut(s)	75
Csp6I	GTAC	7 cut(s)	361, 423, 946, 1037, 1079, 1142, 1591
CspAI	ACCGGT	1 cut(s)	124
CviAII	CATG	6 cut(s)	743, 1008, 1121, 1243, 1578, 1594
CviQI	GTAC	7 cut(s)	361, 423, 946, 1037, 1079, 1142, 1591
DdeI	CTNAG	6 cut(s)	38, 180, 492, 537, 1351, 1468
DpnI	GATC	6 cut(s)	291, 862, 1153, 1215, 1699, 1707
DpnII	GATC	6 cut(s)	289, 860, 1151, 1213, 1697, 1705
EaeI	YGGCCR	3 cut(s)	3, 546, 1741
Eam1104I	CTCTTC	4 cut(s)	259, 500, 861, 1042
EarI	CTCTTC	4 cut(s)	259, 500, 861, 1042
EciI	GGCGGA	1 cut(s)	52
Eco130I	CCWWGG	4 cut(s)	395, 676, 823, 964
Eco24I	GRGCYC	1 cut(s)	1719
Eco32I	GATATC	1 cut(s)	671
Eco47I	GGWCC	1 cut(s)	806
Eco57I	CTGAAG	5 cut(s)	308, 629, 885, 1103, 1686
EcoNI	CCTNNNNNAGG	1 cut(s)	1460
EcoRI	GAATTC	2 cut(s)	151, 1238
EcoRII	CCWGG	3 cut(s)	232, 790, 1752
EcoRV	GATATC	1 cut(s)	671
EcoT14I	CCWWGG	4 cut(s)	395, 676, 823, 964
EcoT38I	GRGCYC	1 cut(s)	1719
ErhI	CCWWGG	4 cut(s)	395, 676, 823, 964
FaeI	CATG	6 cut(s)	746, 1011, 1124, 1246, 1581, 1597
FatI	CATG	6 cut(s)	742, 1007, 1120, 1242, 1577, 1593
FauNDI	CATATG	1 cut(s)	736
FbaI	TGATCA	1 cut(s)	289
FblI	GTMKAC	1 cut(s)	855
Fnu4HI	GCNGC	9 cut(s)	66, 109, 133, 136, 139, 780, 1307, 1644, 1741
FokI	GGATG	1 cut(s)	341
FriOI	GRGCYC	1 cut(s)	1719
Fsp4HI	GCNGC	9 cut(s)	66, 109, 133, 136, 139, 780, 1307, 1644, 1741
FspBI	CTAG	2 cut(s)	1631, 1649
GlaI	GCGC	2 cut(s)	1163, 1563
GluI	GCNGC	9 cut(s)	66, 109, 133, 136, 139, 780, 1307, 1644, 1741
HaeIII	GGCC	4 cut(s)	5, 548, 872, 1743
HapII	CCGG	3 cut(s)	125, 1233, 1775
HgaI	GACGC	1 cut(s)	75
HhaI	GCGC	2 cut(s)	1164, 1564
Hin1II	CATG	6 cut(s)	746, 1011, 1124, 1246, 1581, 1597
Hin6I	GCGC	2 cut(s)	1162, 1562
HinP1I	GCGC	2 cut(s)	1162, 1562
HincII	GTYRAC	1 cut(s)	19
HindII	GTYRAC	1 cut(s)	19
HindIII	AAGCTT	3 cut(s)	185, 631, 1105
HinfI	GANTC	8 cut(s)	278, 892, 991, 1022, 1382, 1574, 1684, 1727
HpaI	GTTAAC	1 cut(s)	19
HpaII	CCGG	3 cut(s)	125, 1233, 1775
HphI	GGTGA	5 cut(s)	212, 458, 1103, 1214, 1778
Hpy166II	GTNNAC	7 cut(s)	19, 361, 455, 856, 948, 1037, 1341
Hpy188I	TCNGA	7 cut(s)	163, 629, 754, 771, 865, 1354, 1705
Hpy188III	TCNNGA	7 cut(s)	326, 380, 460, 647, 1243, 1631, 1787
Hpy8I	GTNNAC	7 cut(s)	19, 361, 455, 856, 948, 1037, 1341
Hpy99I	CGWCG	2 cut(s)	91, 353
HpyAV	CCTTC	7 cut(s)	69, 164, 401, 504, 697, 1078, 1127
HpyCH4III	ACNGT	8 cut(s)	49, 159, 583, 661, 904, 1141, 1627, 1772
HpyCH4IV	ACGT	2 cut(s)	531, 1095
HpyF10VI	GCNNNNNNNGC	4 cut(s)	138, 1004, 1282, 1649
HpyF3I	CTNAG	6 cut(s)	38, 180, 492, 537, 1351, 1468
HpySE526I	ACGT	2 cut(s)	531, 1095
Hsp92II	CATG	6 cut(s)	746, 1011, 1124, 1246, 1581, 1597
HspAI	GCGC	2 cut(s)	1162, 1562
Ksp22I	TGATCA	1 cut(s)	289
KspAI	GTTAAC	1 cut(s)	19
Kzo9I	GATC	6 cut(s)	289, 860, 1151, 1213, 1697, 1705
LmnI	GCTCC	5 cut(s)	47, 143, 382, 608, 1714
Lsp1109I	GCAGC	6 cut(s)	95, 147, 150, 791, 1318, 1630
LweI	GCATC	3 cut(s)	319, 766, 1057
MaeI	CTAG	2 cut(s)	1631, 1649
MaeII	ACGT	2 cut(s)	531, 1095
MaeIII	GTNAC	6 cut(s)	655, 697, 727, 1091, 1376, 1766
MalI	GATC	6 cut(s)	291, 862, 1153, 1215, 1699, 1707
MbiI	CCGCTC	1 cut(s)	377
MboI	GATC	6 cut(s)	289, 860, 1151, 1213, 1697, 1705
MflI	RGATCY	4 cut(s)	860, 1213, 1697, 1705
MhlI	GDGCHC	1 cut(s)	1719
MlsI	TGGCCA	1 cut(s)	548
MluNI	TGGCCA	1 cut(s)	548
MlyI	GAGTC	3 cut(s)	287, 1031, 1376
MmeI	TCCRAC	3 cut(s)	141, 966, 1692
Mox20I	TGGCCA	1 cut(s)	548
MscI	TGGCCA	1 cut(s)	548
MslI	CAYNNNNRTG	2 cut(s)	839, 1296
Msp20I	TGGCCA	1 cut(s)	548
MspA1I	CMGCKG	2 cut(s)	141, 1691
MspI	CCGG	3 cut(s)	125, 1233, 1775
MspR9I	CCNGG	3 cut(s)	234, 792, 1754
Mva1269I	GAATGC	4 cut(s)	765, 812, 1169, 1665
MvaI	CCWGG	3 cut(s)	234, 792, 1754
MvnI	CGCG	2 cut(s)	86, 718
MwoI	GCNNNNNNNGC	4 cut(s)	138, 1004, 1282, 1649
NdeI	CATATG	1 cut(s)	736
NdeII	GATC	6 cut(s)	289, 860, 1151, 1213, 1697, 1705
NlaIII	CATG	6 cut(s)	746, 1011, 1124, 1246, 1581, 1597
NlaIV	GGNNCC	2 cut(s)	1284, 1716
NmeAIII	GCCGAG	1 cut(s)	898
NmuCI	GTSAC	4 cut(s)	655, 1091, 1376, 1766
NspI	RCATGY	2 cut(s)	1011, 1124
NspV	TTCGAA	1 cut(s)	149
PaeI	GCATGC	1 cut(s)	1011
PagI	TCATGA	1 cut(s)	1242
PaqCI	CACCTGC	1 cut(s)	1190
PctI	GAATGC	4 cut(s)	765, 812, 1169, 1665
PfeI	GAWTC	5 cut(s)	892, 991, 1574, 1684, 1727
PinAI	ACCGGT	1 cut(s)	124
PkrI	GCNGC	9 cut(s)	67, 110, 134, 137, 140, 781, 1308, 1645, 1742
PleI	GAGTC	3 cut(s)	286, 1030, 1376
PpsI	GAGTC	3 cut(s)	286, 1030, 1376
Ppu21I	YACGTR	1 cut(s)	532
PshBI	ATTAAT	1 cut(s)	1361
PsiI	TTATAA	1 cut(s)	243
Psp6I	CCWGG	3 cut(s)	232, 790, 1752
PspGI	CCWGG	3 cut(s)	232, 790, 1752
PspN4I	GGNNCC	2 cut(s)	1284, 1716
PspPI	GGNCC	1 cut(s)	806
PsrI	GAACNNNNNNTAC	2 cut(s)	929, 961
PstNI	CAGNNNCTG	1 cut(s)	659
PsuI	RGATCY	4 cut(s)	860, 1213, 1697, 1705
PvuII	CAGCTG	1 cut(s)	1691
RsaI	GTAC	7 cut(s)	362, 424, 947, 1038, 1080, 1143, 1592
RsaNI	GTAC	7 cut(s)	361, 423, 946, 1037, 1079, 1142, 1591
RseI	CAYNNNNRTG	2 cut(s)	839, 1296
SatI	GCNGC	9 cut(s)	66, 109, 133, 136, 139, 780, 1307, 1644, 1741
Sau3AI	GATC	6 cut(s)	289, 860, 1151, 1213, 1697, 1705
Sau96I	GGNCC	1 cut(s)	806
SchI	GAGTC	3 cut(s)	287, 1031, 1376
ScrFI	CCNGG	3 cut(s)	234, 792, 1754
SduI	GDGCHC	1 cut(s)	1719
SfaNI	GCATC	3 cut(s)	319, 766, 1057
SfcI	CTRYAG	4 cut(s)	282, 856, 900, 1386
SfuI	TTCGAA	1 cut(s)	149
SinI	GGWCC	1 cut(s)	806
SmiMI	CAYNNNNRTG	2 cut(s)	839, 1296
SphI	GCATGC	1 cut(s)	1011
SsiI	CCGC	9 cut(s)	11, 63, 66, 84, 133, 141, 375, 1174, 1740
SspI	AATATT	2 cut(s)	880, 1549
SspMI	CTAG	2 cut(s)	1631, 1649
StyD4I	CCNGG	3 cut(s)	232, 790, 1752
StyI	CCWWGG	4 cut(s)	395, 676, 823, 964
TaaI	ACNGT	8 cut(s)	49, 159, 583, 661, 904, 1141, 1627, 1772
TaiI	ACGT	2 cut(s)	534, 1098
TaqI	TCGA	4 cut(s)	149, 309, 1110, 1150
TatI	WGTACW	6 cut(s)	360, 422, 945, 1036, 1078, 1590
TauI	GCSGC	3 cut(s)	68, 135, 1743
TfiI	GAWTC	5 cut(s)	892, 991, 1574, 1684, 1727
TscAI	CASTG	2 cut(s)	436, 660
TseFI	GTSAC	4 cut(s)	655, 1091, 1376, 1766
TseI	GCWGC	6 cut(s)	108, 135, 138, 779, 1306, 1643
Tsp45I	GTSAC	4 cut(s)	655, 1091, 1376, 1766
TspDTI	ATGAA	5 cut(s)	1231, 1259, 1491, 1509, 1566
TspGWI	ACGGA	1 cut(s)	22
TspRI	CASTG	2 cut(s)	436, 660
VpaK11BI	GGWCC	1 cut(s)	806
VspI	ATTAAT	1 cut(s)	1361
XagI	CCTNNNNNAGG	1 cut(s)	1460
XapI	RAATTY	7 cut(s)	53, 151, 596, 1193, 1238, 1430, 1604
XbaI	TCTAGA	1 cut(s)	1630
XceI	RCATGY	2 cut(s)	1011, 1124
XmiI	GTMKAC	1 cut(s)	855
XspI	CTAG	2 cut(s)	1631, 1649

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.