Pentatricopeptide repeat-containing protein At2g27800
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g03060 FvH4_3g03090 |
| pyrus_communis | pycom01g12300 |
| rosa_laevigata | RLG00000014597 |
| rosa_multiflora | Rmu_sc0008316.1_g000009 |
| rosa_roxburghii | Rroxscaffold_7G00205910 Rroxscaffold_7G00205970 Rroxscaffold_7G00205980 |
| rosa_samantha | Rh7DG423600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 251 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 244, 282 |
| AgsI | TTSAA | 2 cut(s) | 10, 292 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 336, 368 |
| AluBI | AGCT | 2 cut(s) | 169, 299 |
| AluI | AGCT | 2 cut(s) | 169, 299 |
| Alw26I | GTCTC | 1 cut(s) | 77 |
| AsuHPI | GGTGA | 1 cut(s) | 382 |
| AsuNHI | GCTAGC | 1 cut(s) | 169 |
| BbsI | GAAGAC | 1 cut(s) | 299 |
| BccI | CCATC | 2 cut(s) | 47, 365 |
| BclI | TGATCA | 1 cut(s) | 211 |
| BcoDI | GTCTC | 1 cut(s) | 77 |
| BfaI | CTAG | 1 cut(s) | 170 |
| BmtI | GCTAGC | 1 cut(s) | 173 |
| BpiI | GAAGAC | 1 cut(s) | 299 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 244, 282 |
| BseGI | GGATG | 2 cut(s) | 58, 81 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 244, 282 |
| BseRI | GAGGAG | 1 cut(s) | 116 |
| BslFI | GGGAC | 1 cut(s) | 43 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 244, 282 |
| BsmAI | GTCTC | 1 cut(s) | 77 |
| BsmFI | GGGAC | 1 cut(s) | 43 |
| Bsp143I | GATC | 1 cut(s) | 211 |
| BspOI | GCTAGC | 1 cut(s) | 173 |
| BssMI | GATC | 1 cut(s) | 211 |
| BssNAI | GTATAC | 1 cut(s) | 252 |
| Bst1107I | GTATAC | 1 cut(s) | 252 |
| Bst4CI | ACNGT | 2 cut(s) | 305, 348 |
| BstC8I | GCNNGC | 1 cut(s) | 171 |
| BstDEI | CTNAG | 1 cut(s) | 180 |
| BstF5I | GGATG | 2 cut(s) | 58, 81 |
| BstKTI | GATC | 1 cut(s) | 214 |
| BstMAI | GTCTC | 1 cut(s) | 77 |
| BstMBI | GATC | 1 cut(s) | 211 |
| BstV2I | GAAGAC | 1 cut(s) | 299 |
| BstZ17I | GTATAC | 1 cut(s) | 252 |
| BtsCI | GGATG | 2 cut(s) | 58, 81 |
| Cac8I | GCNNGC | 1 cut(s) | 171 |
| CseI | GACGC | 1 cut(s) | 321 |
| CviAII | CATG | 1 cut(s) | 222 |
| CviJI | RGCY | 3 cut(s) | 169, 179, 299 |
| CviKI_1 | RGCY | 3 cut(s) | 169, 179, 299 |
| DdeI | CTNAG | 1 cut(s) | 180 |
| DpnI | GATC | 1 cut(s) | 213 |
| DpnII | GATC | 1 cut(s) | 211 |
| FaeI | CATG | 1 cut(s) | 225 |
| FaiI | YATR | 4 cut(s) | 44, 50, 223, 252 |
| FaqI | GGGAC | 1 cut(s) | 43 |
| FatI | CATG | 1 cut(s) | 221 |
| FbaI | TGATCA | 1 cut(s) | 211 |
| FblI | GTMKAC | 1 cut(s) | 251 |
| FokI | GGATG | 2 cut(s) | 65, 88 |
| FspBI | CTAG | 1 cut(s) | 170 |
| HgaI | GACGC | 1 cut(s) | 321 |
| Hin1II | CATG | 1 cut(s) | 225 |
| HindIII | AAGCTT | 1 cut(s) | 297 |
| HinfI | GANTC | 3 cut(s) | 184, 190, 270 |
| HphI | GGTGA | 1 cut(s) | 382 |
| Hpy166II | GTNNAC | 1 cut(s) | 252 |
| Hpy188I | TCNGA | 3 cut(s) | 189, 312, 398 |
| Hpy188III | TCNNGA | 4 cut(s) | 128, 276, 289, 336 |
| Hpy8I | GTNNAC | 1 cut(s) | 252 |
| HpyAV | CCTTC | 2 cut(s) | 4, 66 |
| HpyCH4III | ACNGT | 2 cut(s) | 305, 348 |
| HpyCH4IV | ACGT | 1 cut(s) | 257 |
| HpyF3I | CTNAG | 1 cut(s) | 180 |
| HpySE526I | ACGT | 1 cut(s) | 257 |
| Hsp92II | CATG | 1 cut(s) | 225 |
| Ksp22I | TGATCA | 1 cut(s) | 211 |
| Kzo9I | GATC | 1 cut(s) | 211 |
| LpnPI | CCDG | 3 cut(s) | 77, 141, 321 |
| MaeI | CTAG | 1 cut(s) | 170 |
| MaeII | ACGT | 1 cut(s) | 257 |
| MaeIII | GTNAC | 1 cut(s) | 136 |
| MalI | GATC | 1 cut(s) | 213 |
| MboI | GATC | 1 cut(s) | 211 |
| MboII | GAAGA | 1 cut(s) | 299 |
| MluCI | AATT | 2 cut(s) | 5, 339 |
| MmeI | TCCRAC | 1 cut(s) | 247 |
| MnlI | CCTC | 2 cut(s) | 94, 237 |
| NdeII | GATC | 1 cut(s) | 211 |
| NheI | GCTAGC | 1 cut(s) | 169 |
| NlaIII | CATG | 1 cut(s) | 225 |
| NmuCI | GTSAC | 1 cut(s) | 136 |
| PfeI | GAWTC | 3 cut(s) | 184, 190, 270 |
| Sau3AI | GATC | 1 cut(s) | 211 |
| SetI | ASST | 4 cut(s) | 96, 171, 260, 301 |
| Sse9I | AATT | 2 cut(s) | 5, 339 |
| SspMI | CTAG | 1 cut(s) | 170 |
| TaaI | ACNGT | 2 cut(s) | 305, 348 |
| TaiI | ACGT | 1 cut(s) | 260 |
| TaqI | TCGA | 1 cut(s) | 99 |
| TasI | AATT | 2 cut(s) | 5, 339 |
| TfiI | GAWTC | 3 cut(s) | 184, 190, 270 |
| TseFI | GTSAC | 1 cut(s) | 136 |
| Tsp45I | GTSAC | 1 cut(s) | 136 |
| TspDTI | ATGAA | 6 cut(s) | 92, 122, 147, 309, 330, 375 |
| XmiI | GTMKAC | 1 cut(s) | 251 |
| XspI | CTAG | 1 cut(s) | 170 |