Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g03060 FvH4_3g03090 |
| pyrus_communis | pycom01g12300 |
| rosa_laevigata | RLG00000014597 |
| rosa_multiflora | Rmu_sc0008316.1_g000009 |
| rosa_roxburghii | Rroxscaffold_7G00205910 Rroxscaffold_7G00205970 Rroxscaffold_7G00205980 |
| rosa_samantha | Rh7DG423600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 146 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 139, 177 |
| AgsI | TTSAA | 1 cut(s) | 187 |
| AluBI | AGCT | 2 cut(s) | 64, 194 |
| AluI | AGCT | 2 cut(s) | 64, 194 |
| AsuHPI | GGTGA | 1 cut(s) | 225 |
| AsuNHI | GCTAGC | 1 cut(s) | 64 |
| BbsI | GAAGAC | 1 cut(s) | 194 |
| BclI | TGATCA | 1 cut(s) | 106 |
| BfaI | CTAG | 1 cut(s) | 65 |
| BmtI | GCTAGC | 1 cut(s) | 68 |
| BpiI | GAAGAC | 1 cut(s) | 194 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 139, 177 |
| Bse1I | ACTGG | 1 cut(s) | 306 |
| Bse3DI | GCAATG | 1 cut(s) | 259 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 139, 177 |
| BseMI | GCAATG | 1 cut(s) | 259 |
| BseNI | ACTGG | 1 cut(s) | 306 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 139, 177 |
| Bsp143I | GATC | 1 cut(s) | 106 |
| BspHI | TCATGA | 1 cut(s) | 25 |
| BspOI | GCTAGC | 1 cut(s) | 68 |
| BsrDI | GCAATG | 1 cut(s) | 259 |
| BsrI | ACTGG | 1 cut(s) | 306 |
| BssMI | GATC | 1 cut(s) | 106 |
| BssNAI | GTATAC | 1 cut(s) | 147 |
| Bst1107I | GTATAC | 1 cut(s) | 147 |
| Bst4CI | ACNGT | 1 cut(s) | 321 |
| Bst6I | CTCTTC | 1 cut(s) | 287 |
| BstC8I | GCNNGC | 1 cut(s) | 66 |
| BstDEI | CTNAG | 1 cut(s) | 75 |
| BstKTI | GATC | 1 cut(s) | 109 |
| BstMBI | GATC | 1 cut(s) | 106 |
| BstV2I | GAAGAC | 1 cut(s) | 194 |
| BstZ17I | GTATAC | 1 cut(s) | 147 |
| BtsIMutI | CAGTG | 1 cut(s) | 299 |
| Cac8I | GCNNGC | 1 cut(s) | 66 |
| CciI | TCATGA | 1 cut(s) | 25 |
| CviAII | CATG | 3 cut(s) | 26, 117, 266 |
| CviJI | RGCY | 3 cut(s) | 64, 74, 194 |
| CviKI_1 | RGCY | 3 cut(s) | 64, 74, 194 |
| DdeI | CTNAG | 1 cut(s) | 75 |
| DpnI | GATC | 1 cut(s) | 108 |
| DpnII | GATC | 1 cut(s) | 106 |
| Eam1104I | CTCTTC | 1 cut(s) | 287 |
| EarI | CTCTTC | 1 cut(s) | 287 |
| Eco32I | GATATC | 1 cut(s) | 286 |
| EcoRV | GATATC | 1 cut(s) | 286 |
| FaeI | CATG | 3 cut(s) | 29, 120, 269 |
| FaiI | YATR | 7 cut(s) | 27, 118, 147, 198, 245, 267, 310 |
| FatI | CATG | 3 cut(s) | 25, 116, 265 |
| FbaI | TGATCA | 1 cut(s) | 106 |
| FblI | GTMKAC | 1 cut(s) | 146 |
| FspBI | CTAG | 1 cut(s) | 65 |
| Hin1II | CATG | 3 cut(s) | 29, 120, 269 |
| HindIII | AAGCTT | 1 cut(s) | 192 |
| HinfI | GANTC | 6 cut(s) | 79, 85, 165, 228, 295, 305 |
| HphI | GGTGA | 1 cut(s) | 225 |
| Hpy166II | GTNNAC | 2 cut(s) | 147, 299 |
| Hpy188I | TCNGA | 2 cut(s) | 84, 207 |
| Hpy188III | TCNNGA | 4 cut(s) | 26, 171, 184, 289 |
| Hpy8I | GTNNAC | 2 cut(s) | 147, 299 |
| HpyAV | CCTTC | 1 cut(s) | 246 |
| HpyCH4III | ACNGT | 1 cut(s) | 321 |
| HpyCH4IV | ACGT | 1 cut(s) | 152 |
| HpyCH4V | TGCA | 1 cut(s) | 252 |
| HpyF3I | CTNAG | 1 cut(s) | 75 |
| HpySE526I | ACGT | 1 cut(s) | 152 |
| Hsp92II | CATG | 3 cut(s) | 29, 120, 269 |
| Ksp22I | TGATCA | 1 cut(s) | 106 |
| Kzo9I | GATC | 1 cut(s) | 106 |
| LpnPI | CCDG | 2 cut(s) | 274, 287 |
| MaeI | CTAG | 1 cut(s) | 65 |
| MaeII | ACGT | 1 cut(s) | 152 |
| MaeIII | GTNAC | 1 cut(s) | 31 |
| MalI | GATC | 1 cut(s) | 108 |
| MboI | GATC | 1 cut(s) | 106 |
| MboII | GAAGA | 2 cut(s) | 194, 304 |
| MlyI | GAGTC | 1 cut(s) | 304 |
| MmeI | TCCRAC | 1 cut(s) | 142 |
| MnlI | CCTC | 2 cut(s) | 33, 132 |
| NdeII | GATC | 1 cut(s) | 106 |
| NheI | GCTAGC | 1 cut(s) | 64 |
| NlaIII | CATG | 3 cut(s) | 29, 120, 269 |
| NmuCI | GTSAC | 1 cut(s) | 31 |
| PagI | TCATGA | 1 cut(s) | 25 |
| PfeI | GAWTC | 5 cut(s) | 79, 85, 165, 228, 305 |
| PleI | GAGTC | 1 cut(s) | 303 |
| PpsI | GAGTC | 1 cut(s) | 303 |
| Sau3AI | GATC | 1 cut(s) | 106 |
| SchI | GAGTC | 1 cut(s) | 304 |
| SetI | ASST | 4 cut(s) | 66, 155, 196, 238 |
| SspI | AATATT | 1 cut(s) | 100 |
| SspMI | CTAG | 1 cut(s) | 65 |
| TaaI | ACNGT | 1 cut(s) | 321 |
| TaiI | ACGT | 1 cut(s) | 155 |
| TaqI | TCGA | 1 cut(s) | 239 |
| TfiI | GAWTC | 5 cut(s) | 79, 85, 165, 228, 305 |
| TscAI | CASTG | 1 cut(s) | 306 |
| TseFI | GTSAC | 1 cut(s) | 31 |
| Tsp45I | GTSAC | 1 cut(s) | 31 |
| TspDTI | ATGAA | 4 cut(s) | 17, 42, 204, 225 |
| TspRI | CASTG | 1 cut(s) | 306 |
| XmiI | GTMKAC | 1 cut(s) | 146 |
| XspI | CTAG | 1 cut(s) | 65 |