RLG00000014598

Carboxylesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0015532
Physical Location & Seq
Forward (+)
55182748 .. 55183567
820 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014598

Sequence Viewer

Length: 762 bp
ATGCCACTCCATGGCCACGTTCCGGCGAGACTCGACCCAACAACCGGAGTCCAATCCAAAGACGTGGTGGTCTCGCCTGAAACCGGAGTAGAGGCTCGTATTTTCATCCCCAAAATCAACGGCGGAAGTCAGAAGTTGCCCCTTTTAGTCCATTACCACGGTGGAGGCTTCTGCATGGGATCCCCCTTCTGTGAAATTGCAAAGAAGCTAGCCCCAGAGCATCCTCTATCAATTGCCTATGACGATTCCTTAGCCGCTTTGCACTGGATCGCTTCCCACTCTAATAGACAAGGGCCTGAAGCTTGGCTCAACGAGTATGCAGATCTGAACAGGGTTTTCTTGGGCGGTGAGAGTGCTGGAGCCAACATCGCTCATTATGTTTCGGTCCAAGCTGGGGTTAATGTTTCCGTGGGGTTGAACATTGTTGGCTTAGTTATGGTGCATCCTTTCTTTGGAGGTAAAGAGTGTGACAAGATGTATCAGTTTTTAAGCTCAATGAGTCCAGGGTGCAATGATGATCCGAAACTGAACCAGGCAGCGGATTCGGACTTGGTGAAATTGCCATGTGGGAAGGTGTTGGTTTGTGTTGCGGAGAAAGATTCGCTGAGAGATAGAGGAGTGAGCTACCATGAGACTCTAGGGAACTTGAAAGGGCAAGGGTTTGCGGAGTTGTTTGAGACAAAAGGAGAGGACCATTGCTTTCATTTGTTCAACCCCAATGCCGATAAGCTAGGCTGGCCATCTGCTGCAAAAAGTGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

254

Amino Acids

27.18

Weight (kDa)

6.03

Isoelectric Point (pI)

42.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_3 PF07859 69 - 235 2.5e-25 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 68
AccB7I CCANNNNNTGG 1 cut(s) 11
AciI CCGC 6 cut(s) 123, 255, 345, 539, 590, 665
AclWI GGATC 4 cut(s) 174, 187, 275, 512
AcoI YGGCCR 2 cut(s) 13, 737
AcuI CTGAAG 1 cut(s) 318
AfiI CCNNNNNNNGG 7 cut(s) 11, 22, 44, 83, 394, 452, 538
AgsI TTSAA 3 cut(s) 418, 649, 712
AjiI CACGTC 1 cut(s) 64
AjnI CCWGG 2 cut(s) 502, 531
AluBI AGCT 6 cut(s) 208, 302, 392, 492, 624, 730
AluI AGCT 6 cut(s) 208, 302, 392, 492, 624, 730
Alw26I GTCTC 4 cut(s) 22, 76, 626, 671
AlwI GGATC 4 cut(s) 174, 187, 275, 512
AoxI GGCC 3 cut(s) 13, 293, 737
ApeKI GCWGC 2 cut(s) 536, 746
AspS9I GGNCC 3 cut(s) 293, 385, 691
AsuHPI GGTGA 2 cut(s) 359, 565
AsuNHI GCTAGC 1 cut(s) 208
AvaII GGWCC 2 cut(s) 385, 691
BalI TGGCCA 2 cut(s) 15, 739
BamHI GGATCC 1 cut(s) 179
BbvI GCAGC 2 cut(s) 548, 733
BccI CCATC 1 cut(s) 748
BceAI ACGGC 1 cut(s) 136
BcgI CGANNNNNNTGC 2 cut(s) 525, 559
BciT130I CCWGG 2 cut(s) 504, 533
BcoDI GTCTC 4 cut(s) 22, 76, 626, 671
BfaI CTAG 3 cut(s) 209, 638, 731
BglII AGATCT 1 cut(s) 322
BisI GCNGC 3 cut(s) 255, 537, 747
BlsI GCNGC 3 cut(s) 256, 538, 748
Bme1390I CCNGG 2 cut(s) 504, 533
Bme18I GGWCC 2 cut(s) 385, 691
BmgBI CACGTC 1 cut(s) 64
BmgT120I GGNCC 3 cut(s) 293, 385, 691
BmiI GGNNCC 2 cut(s) 181, 361
BmrFI CCNGG 2 cut(s) 504, 533
BmsI GCATC 2 cut(s) 229, 451
BmtI GCTAGC 1 cut(s) 212
BpmI CTGGAG 1 cut(s) 378
Bpu10I CCTNAGC 1 cut(s) 250
BsaI GGTCTC 1 cut(s) 76
BsaJI CCNNGG 4 cut(s) 10, 157, 408, 503
BsaWI WCCGGW 2 cut(s) 44, 83
Bsc4I CCNNNNNNNGG 7 cut(s) 11, 22, 44, 83, 394, 452, 538
Bse1I ACTGG 1 cut(s) 269
Bse3DI GCAATG 2 cut(s) 517, 694
BseBI CCWGG 2 cut(s) 504, 533
BseDI CCNNGG 4 cut(s) 10, 157, 408, 503
BseGI GGATG 3 cut(s) 105, 220, 442
BseLI CCNNNNNNNGG 7 cut(s) 11, 22, 44, 83, 394, 452, 538
BseMI GCAATG 2 cut(s) 517, 694
BseMII CTCAG 1 cut(s) 596
BseNI ACTGG 1 cut(s) 269
BseRI GAGGAG 1 cut(s) 630
BseXI GCAGC 2 cut(s) 548, 733
BseYI CCCAGC 1 cut(s) 392
BshFI GGCC 3 cut(s) 15, 295, 739
BsiSI CCGG 3 cut(s) 23, 45, 84
BslI CCNNNNNNNGG 7 cut(s) 11, 22, 44, 83, 394, 452, 538
BsmAI GTCTC 4 cut(s) 22, 76, 626, 671
BsnI GGCC 3 cut(s) 15, 295, 739
Bso31I GGTCTC 1 cut(s) 76
Bsp143I GATC 4 cut(s) 179, 267, 322, 517
Bsp19I CCATGG 1 cut(s) 10
BspACI CCGC 6 cut(s) 123, 255, 345, 539, 590, 665
BspANI GGCC 3 cut(s) 15, 295, 739
BspCNI CTCAG 1 cut(s) 597
BspLI GGNNCC 2 cut(s) 181, 361
BspOI GCTAGC 1 cut(s) 212
BspPI GGATC 4 cut(s) 174, 187, 275, 512
BspTNI GGTCTC 1 cut(s) 76
BsrDI GCAATG 2 cut(s) 517, 694
BsrI ACTGG 1 cut(s) 269
BssECI CCNNGG 4 cut(s) 10, 157, 408, 503
BssMI GATC 4 cut(s) 179, 267, 322, 517
BssT1I CCWWGG 1 cut(s) 10
Bst2UI CCWGG 2 cut(s) 504, 533
Bst4CI ACNGT 1 cut(s) 161
BstC8I GCNNGC 2 cut(s) 210, 737
BstDEI CTNAG 3 cut(s) 250, 430, 605
BstDSI CCRYGG 3 cut(s) 10, 157, 408
BstF5I GGATG 3 cut(s) 105, 220, 442
BstKTI GATC 4 cut(s) 182, 270, 325, 520
BstMAI GTCTC 4 cut(s) 22, 76, 626, 671
BstMBI GATC 4 cut(s) 179, 267, 322, 517
BstMWI GCNNNNNNNGC 2 cut(s) 368, 736
BstNI CCWGG 2 cut(s) 504, 533
BstSCI CCNGG 2 cut(s) 502, 531
BstV1I GCAGC 2 cut(s) 548, 733
BstX2I RGATCY 2 cut(s) 179, 322
BstXI CCANNNNNNTGG 1 cut(s) 64
BstYI RGATCY 2 cut(s) 179, 322
BsuRI GGCC 3 cut(s) 15, 295, 739
BtgI CCRYGG 3 cut(s) 10, 157, 408
BtgZI GCGATG 1 cut(s) 352
BtrI CACGTC 1 cut(s) 64
BtsCI GGATG 3 cut(s) 105, 220, 442
BtsIMutI CAGTG 1 cut(s) 262
Cac8I GCNNGC 2 cut(s) 210, 737
Cfr13I GGNCC 3 cut(s) 293, 385, 691
CviAII CATG 4 cut(s) 11, 175, 564, 629
DdeI CTNAG 3 cut(s) 250, 430, 605
DpnI GATC 4 cut(s) 181, 269, 324, 519
DpnII GATC 4 cut(s) 179, 267, 322, 517
DrdI GACNNNNNNGTC 1 cut(s) 68
DseDI GACNNNNNNGTC 1 cut(s) 68
EaeI YGGCCR 2 cut(s) 13, 737
EciI GGCGGA 1 cut(s) 138
Eco130I CCWWGG 1 cut(s) 10
Eco31I GGTCTC 1 cut(s) 76
Eco47I GGWCC 2 cut(s) 385, 691
Eco57I CTGAAG 1 cut(s) 318
EcoO109I RGGNCCY 1 cut(s) 293
EcoRII CCWGG 2 cut(s) 502, 531
EcoT14I CCWWGG 1 cut(s) 10
ErhI CCWWGG 1 cut(s) 10
FaeI CATG 4 cut(s) 14, 178, 567, 632
FaiI YATR 8 cut(s) 12, 176, 240, 318, 378, 437, 565, 630
FatI CATG 4 cut(s) 10, 174, 563, 628
Fnu4HI GCNGC 3 cut(s) 255, 537, 747
FokI GGATG 3 cut(s) 92, 207, 429
Fsp4HI GCNGC 3 cut(s) 255, 537, 747
FspBI CTAG 3 cut(s) 209, 638, 731
GluI GCNGC 3 cut(s) 255, 537, 747
GsaI CCCAGC 1 cut(s) 396
GsuI CTGGAG 1 cut(s) 378
HaeIII GGCC 3 cut(s) 15, 295, 739
HapII CCGG 3 cut(s) 23, 45, 84
Hin1II CATG 4 cut(s) 14, 178, 567, 632
HindIII AAGCTT 1 cut(s) 300
HinfI GANTC 7 cut(s) 30, 48, 245, 499, 542, 599, 634
HpaII CCGG 3 cut(s) 23, 45, 84
HphI GGTGA 2 cut(s) 359, 565
Hpy188I TCNGA 4 cut(s) 132, 327, 522, 547
HpyAV CCTTC 2 cut(s) 196, 565
HpyCH4III ACNGT 1 cut(s) 161
HpyCH4IV ACGT 2 cut(s) 18, 63
HpyCH4V TGCA 7 cut(s) 174, 200, 262, 320, 442, 510, 749
HpyF10VI GCNNNNNNNGC 2 cut(s) 368, 736
HpyF3I CTNAG 3 cut(s) 250, 430, 605
HpySE526I ACGT 2 cut(s) 18, 63
Hsp92II CATG 4 cut(s) 14, 178, 567, 632
Kzo9I GATC 4 cut(s) 179, 267, 322, 517
LmnI GCTCC 1 cut(s) 359
Lsp1109I GCAGC 2 cut(s) 548, 733
LweI GCATC 2 cut(s) 229, 451
MaeI CTAG 3 cut(s) 209, 638, 731
MaeII ACGT 2 cut(s) 18, 63
MaeIII GTNAC 1 cut(s) 467
MalI GATC 4 cut(s) 181, 269, 324, 519
MboI GATC 4 cut(s) 179, 267, 322, 517
MfeI CAATTG 1 cut(s) 231
MflI RGATCY 2 cut(s) 179, 322
MlsI TGGCCA 2 cut(s) 15, 739
MluCI AATT 3 cut(s) 195, 231, 557
MluNI TGGCCA 2 cut(s) 15, 739
MlyI GAGTC 4 cut(s) 24, 57, 508, 628
MnlI CCTC 6 cut(s) 85, 158, 234, 449, 608, 682
Mox20I TGGCCA 2 cut(s) 15, 739
MscI TGGCCA 2 cut(s) 15, 739
MseI TTAA 2 cut(s) 399, 488
Msp20I TGGCCA 2 cut(s) 15, 739
MspA1I CMGCKG 1 cut(s) 539
MspI CCGG 3 cut(s) 23, 45, 84
MspR9I CCNGG 2 cut(s) 504, 533
MunI CAATTG 1 cut(s) 231
MvaI CCWGG 2 cut(s) 504, 533
MwoI GCNNNNNNNGC 2 cut(s) 368, 736
NcoI CCATGG 1 cut(s) 10
NdeII GATC 4 cut(s) 179, 267, 322, 517
NheI GCTAGC 1 cut(s) 208
NlaIII CATG 4 cut(s) 14, 178, 567, 632
NlaIV GGNNCC 2 cut(s) 181, 361
NmuCI GTSAC 1 cut(s) 467
PfeI GAWTC 3 cut(s) 245, 542, 599
PflMI CCANNNNNTGG 1 cut(s) 11
PkrI GCNGC 3 cut(s) 256, 538, 748
PleI GAGTC 4 cut(s) 24, 56, 507, 628
PpsI GAGTC 4 cut(s) 24, 56, 507, 628
Psp6I CCWGG 2 cut(s) 502, 531
PspFI CCCAGC 1 cut(s) 392
PspGI CCWGG 2 cut(s) 502, 531
PspN4I GGNNCC 2 cut(s) 181, 361
PspPI GGNCC 3 cut(s) 293, 385, 691
PsuI RGATCY 2 cut(s) 179, 322
SaqAI TTAA 2 cut(s) 399, 488
SatI GCNGC 3 cut(s) 255, 537, 747
Sau3AI GATC 4 cut(s) 179, 267, 322, 517
Sau96I GGNCC 3 cut(s) 293, 385, 691
SchI GAGTC 4 cut(s) 24, 57, 508, 628
ScrFI CCNGG 2 cut(s) 504, 533
SfaNI GCATC 2 cut(s) 229, 451
SinI GGWCC 2 cut(s) 385, 691
Sse9I AATT 3 cut(s) 195, 231, 557
SsiI CCGC 6 cut(s) 123, 255, 345, 539, 590, 665
SspMI CTAG 3 cut(s) 209, 638, 731
StyD4I CCNGG 2 cut(s) 502, 531
StyI CCWWGG 1 cut(s) 10
TaaI ACNGT 1 cut(s) 161
TaiI ACGT 2 cut(s) 21, 66
TaqI TCGA 1 cut(s) 33
TaqII GACCGA 1 cut(s) 373
TasI AATT 3 cut(s) 195, 231, 557
TauI GCSGC 1 cut(s) 257
TfiI GAWTC 3 cut(s) 245, 542, 599
Tru1I TTAA 2 cut(s) 399, 488
Tru9I TTAA 2 cut(s) 399, 488
TscAI CASTG 1 cut(s) 269
TseFI GTSAC 1 cut(s) 467
TseI GCWGC 2 cut(s) 536, 746
Tsp45I GTSAC 1 cut(s) 467
TspDTI ATGAA 2 cut(s) 94, 692
TspGWI ACGGA 1 cut(s) 397
TspRI CASTG 1 cut(s) 269
Van91I CCANNNNNTGG 1 cut(s) 11
VpaK11BI GGWCC 2 cut(s) 385, 691
XcmI CCANNNNNNNNNTGG 2 cut(s) 64, 158
XspI CTAG 3 cut(s) 209, 638, 731
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.