RLG00000016093

PP-loop family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0008644
Physical Location & Seq
Reverse (-)
3815073 .. 3818371
3299 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016093

Sequence Viewer

Length: 2028 bp
ATGGCGGGAGGGGTTATCCTATCGTCCCAAACCTTACTCTTTTCCATTCCCAAAATACCCTTCCCAGTATGGAAGCTCCCCTTCATTTCCCGCCAATTTTCCTGCAAGTGCTCGCAAACCACCCAAGTCGCAGCAGTGGACTTGGCCAAGTACAAAGAAGCTTTCTCTAGACGAATGGACATGGCCGGCCTCAAACCCCACCACCGAATCGCTATTGGAGTTTCTGGAGGTCCGGATAGTATGGCCTTGTGTGCTTTAACTGCGTACTGGAAAGGCCAAGGGTATGATGGTAAATGTGATGAGGGATTCATTGATGGGGTTTTGGCCATAATTGTGGATCATGGGCTGCGTGAAGAGAGCACGGAAGAGGCCAGCATTGTTTCCAATCGTGTCGCGAAAATGGGAATCAGAAGTGATGTTGCCTGTTGTGATTGGGAGGATGGTAAGCCGAAACAAGGTCATGTGCAAGAAGCAGCTCGCGAAATGAGGTACCGGATATTTCAAAACGTTTGTATCAAGAACCAAATTGGTGTGTTACTTACGGCACATCATGCTGATGACCAGGCTGAGTTATTTGTTATCAGACTATCTCGCAATAGCGGTATTCTTGGACTTGCTGGTATGCCTTTCACATCTCAAATTTTCTCCTCGCACACCCATTCTCATACTGAAGTTTCTAGAAACTATGGTATTCTTCTTGTGAGACCACTCCTGGATTTTTCAAAAGAAGATATGTACAAGATATGCCAAGGGAGTGATCAGGAATGGGTGGAAGACCCAACAAATCAAAGCCTGTTATATGCTCGTAATAGAATTCGAATGTCCTTAAGGGACGCATCATGTGCATTCAAAAATGAGCTACAAGCAGTTATTACTGCTTGTCGGAAAACACGCGTATATATTGATCATGTTTGCCGTGCTTTGATGTCTAAAGCAGTGACCGTTTCTCATCTAGGATATGCGGTTATTGATTTGGAGATTCTTAATCAATCAAAAGTGGAGGACATATGCCTGTCAAAGTTCATTTCCTTAGTTTTGCAGTTCATCTCACAAAGGCACAGACCACTTAGAGGTAATACTTCAAAATTGCTTGTTGGTTACCTGCGTAGTTTCCCATGCAAGACATCCGTTACTGCAGCTGGCTGCTTCCTTTCTCCAGCTCCTGGGTCTAGAGGCACAAAAGCCCTGGTGTGCTGTTCTGTTGATTCTCCTTTGCCTTCAAATATAGGGTTATCCCATCAACACTTTCAAGCAGTACAAGAACACTCTACTCCAGATGAGATAGAGCAAATTATCGCTGATGGCAAATCCTATGCAGATCACTTGGTTCCAAATGCATCAGATGTGCCTTTCTTAGAAGTAACATCTAAATCAGTTTTAACTGAAGCGAGGAGGCTTGGTATGATTAGTGAGGCAACCCATACAAATATTCTTTCATTGCAGAAGGAAGAGATTGAGCATTTCAAGTCCAAGAGTGAAGTAAAAGCTGACTACAAGTCAAAGCATGGAGGCAAATCTATTAGTACATCACCCAGTGAACCACTTCCCCCTGGGCAAATATGTTGCTTCATGAACCGATTTTTTATCACATGGAAACTGAGTGAAGTTTCTGAGGAAGCTTTGGAGGGGGAAAGTCGGTGTGGTGGCAAATCTTGTATTGGCCATGACACGGTGCTTGAGGTGCGGAACATGAGTGAACAGGATTGGCTGTATCTTTCCGACTTGTCAAAGTCTCATACTTCGGGGAACCTTCAAGAACAAAGCAACTCTTTGGATAGGAAGGTAGAACAAAGAAAAGAGGAGATAGATACATCTCTAGACTATGCAAGGATTTCAGCACAAAGAGCTCTTCAATCCCTGAAATCTATTCCTGCTGCTGCAAGAAGGGGCCTGCCTGTTCTAGTCAATAGTCAAGGACTTCTGCTAAGCATACCAAGCATCGACTTCCAAGGCTGCTCATGCTTAATGGTCTCTGCGACATTCAAACCAAAAGTACCACTTGGGGGAGACCATAGTTCATTCATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ATP_bind_3

Protein Analysis

676

Amino Acids

74.55

Weight (kDa)

7.96

Isoelectric Point (pI)

48.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATP_bind_3 PF01171 70 - 274 1.8e-51 PP-loop domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1110
Acc65I GGTACC 1 cut(s) 489
AccB1I GGYRCC 1 cut(s) 489
AccB7I CCANNNNNTGG 1 cut(s) 1163
AccII CGCG 3 cut(s) 395, 480, 894
AccIII TCCGGA 1 cut(s) 232
AciI CCGC 5 cut(s) 5, 91, 600, 962, 1684
AclI AACGTT 1 cut(s) 507
AclWI GGATC 1 cut(s) 345
AcoI YGGCCR 4 cut(s) 144, 183, 324, 1660
AcsI RAATTY 2 cut(s) 639, 813
AcuI CTGAAG 2 cut(s) 690, 1404
AdeI CACNNNGTG 1 cut(s) 1535
AfaI GTAC 7 cut(s) 152, 266, 491, 737, 1257, 1525, 1995
AfiI CCNNNNNNNGG 5 cut(s) 455, 1070, 1163, 1669, 2003
AflII CTTAAG 1 cut(s) 826
AflIII ACRYGT 1 cut(s) 892
AhdI GACNNNNNGTC 1 cut(s) 1495
AjnI CCWGG 5 cut(s) 561, 711, 1162, 1185, 1549
AjuI GAANNNNNNNTTGG 2 cut(s) 44, 76
AluBI AGCT 9 cut(s) 76, 161, 476, 859, 1139, 1160, 1487, 1619, 1847
AluI AGCT 9 cut(s) 76, 161, 476, 859, 1139, 1160, 1487, 1619, 1847
Alw21I GWGCWC 3 cut(s) 113, 362, 1849
Alw26I GTCTC 4 cut(s) 697, 1737, 1975, 2001
AlwI GGATC 1 cut(s) 345
AlwNI CAGNNNCTG 1 cut(s) 1163
Aor13HI TCCGGA 1 cut(s) 232
AoxI GGCC 9 cut(s) 144, 183, 187, 243, 274, 324, 369, 1660, 1888
ApeKI GCWGC 8 cut(s) 131, 346, 473, 1136, 1143, 1874, 1877, 1953
ApoI RAATTY 2 cut(s) 639, 813
Asp700I GAANNNNTTC 1 cut(s) 1542
Asp718I GGTACC 1 cut(s) 489
AspS9I GGNCC 2 cut(s) 230, 1888
AsuHPI GGTGA 1 cut(s) 1521
AsuII TTCGAA 1 cut(s) 817
AvaII GGWCC 1 cut(s) 230
BaeI ACNNNNGTAYC 2 cut(s) 496, 529
BalI TGGCCA 3 cut(s) 146, 326, 1662
BanI GGYRCC 1 cut(s) 489
BanII GRGCYC 1 cut(s) 1849
BbsI GAAGAC 1 cut(s) 780
Bbv12I GWGCWC 3 cut(s) 113, 362, 1849
BbvI GCAGC 8 cut(s) 143, 333, 485, 1130, 1148, 1861, 1864, 1940
BccI CCATC 5 cut(s) 281, 308, 434, 1245, 1295
BceAI ACGGC 2 cut(s) 558, 900
BciT130I CCWGG 5 cut(s) 563, 713, 1164, 1187, 1551
BclI TGATCA 2 cut(s) 757, 904
BcoDI GTCTC 4 cut(s) 697, 1737, 1975, 2001
BfaI CTAG 7 cut(s) 168, 678, 953, 1170, 1817, 1901, 2026
BfmI CTRYAG 1 cut(s) 1134
BfrI CTTAAG 1 cut(s) 826
BfuAI ACCTGC 1 cut(s) 1110
BisI GCNGC 8 cut(s) 132, 347, 474, 1137, 1144, 1875, 1878, 1954
BlpI GCTNAGC 1 cut(s) 1925
BlsI GCNGC 8 cut(s) 133, 348, 475, 1138, 1145, 1876, 1879, 1955
Bme1390I CCNGG 5 cut(s) 563, 713, 1164, 1187, 1551
Bme18I GGWCC 1 cut(s) 230
BmeRI GACNNNNNGTC 1 cut(s) 1495
BmgT120I GGNCC 2 cut(s) 230, 1888
BmiI GGNNCC 4 cut(s) 491, 1329, 1748, 1889
BmrFI CCNGG 5 cut(s) 563, 713, 1164, 1187, 1551
BmrI ACTGGG 2 cut(s) 59, 1527
BmsI GCATC 3 cut(s) 845, 1346, 1947
BmuI ACTGGG 2 cut(s) 59, 1527
BpiI GAAGAC 1 cut(s) 780
BpmI CTGGAG 3 cut(s) 246, 1140, 1257
Bpu1102I GCTNAGC 1 cut(s) 1925
Bpu14I TTCGAA 1 cut(s) 817
BpuEI CTTGAG 1 cut(s) 1697
BsaI GGTCTC 3 cut(s) 697, 1975, 2001
BsaJI CCNNGG 7 cut(s) 277, 748, 1163, 1185, 1549, 1550, 1948
BsaWI WCCGGW 2 cut(s) 232, 492
BsaXI ACNNNNNCTCC 2 cut(s) 1384, 1414
Bsc4I CCNNNNNNNGG 5 cut(s) 455, 1070, 1163, 1669, 2003
Bse118I RCCGGY 1 cut(s) 185
Bse1I ACTGG 3 cut(s) 65, 272, 1533
Bse3DI GCAATG 1 cut(s) 1436
BseAI TCCGGA 1 cut(s) 232
BseBI CCWGG 5 cut(s) 563, 713, 1164, 1187, 1551
BseDI CCNNGG 7 cut(s) 277, 748, 1163, 1185, 1549, 1550, 1948
BseGI GGATG 2 cut(s) 445, 1124
BseLI CCNNNNNNNGG 5 cut(s) 455, 1070, 1163, 1669, 2003
BseMI GCAATG 1 cut(s) 1436
BseMII CTCAG 3 cut(s) 558, 1589, 1602
BseNI ACTGG 3 cut(s) 65, 272, 1533
BseRI GAGGAG 3 cut(s) 637, 1405, 1814
BseXI GCAGC 8 cut(s) 143, 333, 485, 1130, 1148, 1861, 1864, 1940
Bsh1236I CGCG 3 cut(s) 395, 480, 894
BshFI GGCC 9 cut(s) 146, 185, 189, 245, 276, 326, 371, 1662, 1890
BshNI GGYRCC 1 cut(s) 489
BsiHKAI GWGCWC 3 cut(s) 113, 362, 1849
BsiSI CCGG 3 cut(s) 186, 233, 493
BslFI GGGAC 2 cut(s) 10, 845
BslI CCNNNNNNNGG 5 cut(s) 455, 1070, 1163, 1669, 2003
BsmAI GTCTC 4 cut(s) 697, 1737, 1975, 2001
BsmFI GGGAC 2 cut(s) 10, 845
BsmI GAATGC 1 cut(s) 845
BsnI GGCC 9 cut(s) 146, 185, 189, 245, 276, 326, 371, 1662, 1890
Bso31I GGTCTC 3 cut(s) 697, 1975, 2001
Bsp119I TTCGAA 1 cut(s) 817
Bsp1286I GDGCHC 3 cut(s) 113, 362, 1849
Bsp13I TCCGGA 1 cut(s) 232
Bsp1407I TGTACA 1 cut(s) 735
Bsp143I GATC 4 cut(s) 337, 757, 904, 1318
Bsp1720I GCTNAGC 1 cut(s) 1925
Bsp68I TCGCGA 2 cut(s) 395, 480
BspACI CCGC 5 cut(s) 5, 91, 600, 962, 1684
BspANI GGCC 9 cut(s) 146, 185, 189, 245, 276, 326, 371, 1662, 1890
BspCNI CTCAG 3 cut(s) 559, 1590, 1603
BspEI TCCGGA 1 cut(s) 232
BspFNI CGCG 3 cut(s) 395, 480, 894
BspHI TCATGA 1 cut(s) 1569
BspLI GGNNCC 4 cut(s) 491, 1329, 1748, 1889
BspMAI CTGCAG 1 cut(s) 1138
BspMI ACCTGC 1 cut(s) 1110
BspPI GGATC 1 cut(s) 345
BspQI GCTCTTC 1 cut(s) 1854
BspT104I TTCGAA 1 cut(s) 817
BspT107I GGYRCC 1 cut(s) 489
BspTI CTTAAG 1 cut(s) 826
BspTNI GGTCTC 3 cut(s) 697, 1975, 2001
BsrDI GCAATG 1 cut(s) 1436
BsrFI RCCGGY 1 cut(s) 185
BsrGI TGTACA 1 cut(s) 735
BsrI ACTGG 3 cut(s) 65, 272, 1533
BssAI RCCGGY 1 cut(s) 185
BssECI CCNNGG 7 cut(s) 277, 748, 1163, 1185, 1549, 1550, 1948
BssMI GATC 4 cut(s) 337, 757, 904, 1318
BssT1I CCWWGG 3 cut(s) 277, 748, 1948
Bst2UI CCWGG 5 cut(s) 563, 713, 1164, 1187, 1551
Bst4CI ACNGT 2 cut(s) 943, 1672
Bst6I CTCTTC 4 cut(s) 348, 360, 1443, 1854
BstAFI CTTAAG 1 cut(s) 826
BstAPI GCANNNNNTGC 2 cut(s) 551, 842
BstAUI TGTACA 1 cut(s) 735
BstBI TTCGAA 1 cut(s) 817
BstC8I GCNNGC 6 cut(s) 113, 187, 373, 478, 1141, 1892
BstDEI CTNAG 7 cut(s) 567, 1030, 1067, 1354, 1598, 1611, 1925
BstEII GGTNACC 1 cut(s) 1097
BstF5I GGATG 2 cut(s) 445, 1124
BstFNI CGCG 3 cut(s) 395, 480, 894
BstKTI GATC 4 cut(s) 340, 760, 907, 1321
BstMAI GTCTC 4 cut(s) 697, 1737, 1975, 2001
BstMBI GATC 4 cut(s) 337, 757, 904, 1318
BstMWI GCNNNNNNNGC 8 cut(s) 251, 260, 551, 842, 1681, 1844, 1935, 1959
BstNI CCWGG 5 cut(s) 563, 713, 1164, 1187, 1551
BstPI GGTNACC 1 cut(s) 1097
BstSCI CCNGG 5 cut(s) 561, 711, 1162, 1185, 1549
BstSFI CTRYAG 1 cut(s) 1134
BstUI CGCG 3 cut(s) 395, 480, 894
BstV1I GCAGC 8 cut(s) 143, 333, 485, 1130, 1148, 1861, 1864, 1940
BstV2I GAAGAC 1 cut(s) 780
BstXI CCANNNNNNTGG 1 cut(s) 334
BsuRI GGCC 9 cut(s) 146, 185, 189, 245, 276, 326, 371, 1662, 1890
BtsCI GGATG 2 cut(s) 445, 1124
BtsI GCAGTG 2 cut(s) 141, 942
BtsIMutI CAGTG 3 cut(s) 141, 942, 1540
BtuMI TCGCGA 2 cut(s) 395, 480
BveI ACCTGC 1 cut(s) 1110
Cac8I GCNNGC 6 cut(s) 113, 187, 373, 478, 1141, 1892
CaiI CAGNNNCTG 1 cut(s) 1163
CciI TCATGA 1 cut(s) 1569
Cfr10I RCCGGY 1 cut(s) 185
Cfr13I GGNCC 2 cut(s) 230, 1888
CseI GACGC 1 cut(s) 842
Csp6I GTAC 7 cut(s) 151, 265, 490, 736, 1256, 1524, 1994
CviQI GTAC 7 cut(s) 151, 265, 490, 736, 1256, 1524, 1994
DdeI CTNAG 7 cut(s) 567, 1030, 1067, 1354, 1598, 1611, 1925
DpnI GATC 4 cut(s) 339, 759, 906, 1320
DpnII GATC 4 cut(s) 337, 757, 904, 1318
DraIII CACNNNGTG 1 cut(s) 1535
DriI GACNNNNNGTC 1 cut(s) 1495
EaeI YGGCCR 4 cut(s) 144, 183, 324, 1660
Eam1104I CTCTTC 4 cut(s) 348, 360, 1443, 1854
Eam1105I GACNNNNNGTC 1 cut(s) 1495
EarI CTCTTC 4 cut(s) 348, 360, 1443, 1854
Ecl136II GAGCTC 1 cut(s) 1847
Eco130I CCWWGG 3 cut(s) 277, 748, 1948
Eco24I GRGCYC 1 cut(s) 1849
Eco31I GGTCTC 3 cut(s) 697, 1975, 2001
Eco47I GGWCC 1 cut(s) 230
Eco53kI GAGCTC 1 cut(s) 1847
Eco57I CTGAAG 2 cut(s) 690, 1404
Eco91I GGTNACC 1 cut(s) 1097
EcoICRI GAGCTC 1 cut(s) 1847
EcoO109I RGGNCCY 1 cut(s) 1888
EcoO65I GGTNACC 1 cut(s) 1097
EcoRI GAATTC 1 cut(s) 813
EcoRII CCWGG 5 cut(s) 561, 711, 1162, 1185, 1549
EcoT14I CCWWGG 3 cut(s) 277, 748, 1948
EcoT22I ATGCAT 1 cut(s) 1339
EcoT38I GRGCYC 1 cut(s) 1849
ErhI CCWWGG 3 cut(s) 277, 748, 1948
FalI AAGNNNNNCTT 6 cut(s) 65, 97, 1753, 1785, 1983, 2015
FaqI GGGAC 2 cut(s) 10, 845
FauI CCCGC 1 cut(s) 98
FauNDI CATATG 1 cut(s) 1007
FbaI TGATCA 2 cut(s) 757, 904
Fnu4HI GCNGC 8 cut(s) 132, 347, 474, 1137, 1144, 1875, 1878, 1954
FokI GGATG 2 cut(s) 452, 1111
FriOI GRGCYC 1 cut(s) 1849
FseI GGCCGGCC 1 cut(s) 189
Fsp4HI GCNGC 8 cut(s) 132, 347, 474, 1137, 1144, 1875, 1878, 1954
FspBI CTAG 7 cut(s) 168, 678, 953, 1170, 1817, 1901, 2026
GluI GCNGC 8 cut(s) 132, 347, 474, 1137, 1144, 1875, 1878, 1954
GsuI CTGGAG 3 cut(s) 246, 1140, 1257
HaeIII GGCC 9 cut(s) 146, 185, 189, 245, 276, 326, 371, 1662, 1890
HapII CCGG 3 cut(s) 186, 233, 493
HgaI GACGC 1 cut(s) 842
HindIII AAGCTT 2 cut(s) 159, 1617
HinfI GANTC 5 cut(s) 207, 306, 405, 979, 1205
HpaII CCGG 3 cut(s) 186, 233, 493
HphI GGTGA 1 cut(s) 1521
Hpy166II GTNNAC 3 cut(s) 139, 1538, 1697
Hpy188I TCNGA 6 cut(s) 410, 584, 885, 1342, 1612, 1720
Hpy8I GTNNAC 3 cut(s) 139, 1538, 1697
HpyAV CCTTC 7 cut(s) 70, 91, 1227, 1438, 1760, 1774, 1878
HpyCH4III ACNGT 2 cut(s) 943, 1672
HpyCH4IV ACGT 1 cut(s) 507
HpyF10VI GCNNNNNNNGC 8 cut(s) 251, 260, 551, 842, 1681, 1844, 1935, 1959
HpyF3I CTNAG 7 cut(s) 567, 1030, 1067, 1354, 1598, 1611, 1925
HpySE526I ACGT 1 cut(s) 507
Kpn2I TCCGGA 1 cut(s) 232
KpnI GGTACC 1 cut(s) 493
KroI GCCGGC 1 cut(s) 185
KroNI GCCGGC 1 cut(s) 187
Ksp22I TGATCA 2 cut(s) 757, 904
Kzo9I GATC 4 cut(s) 337, 757, 904, 1318
LguI GCTCTTC 1 cut(s) 1854
LmnI GCTCC 2 cut(s) 81, 1165
Lsp1109I GCAGC 8 cut(s) 143, 333, 485, 1130, 1148, 1861, 1864, 1940
LweI GCATC 3 cut(s) 845, 1346, 1947
MaeI CTAG 7 cut(s) 168, 678, 953, 1170, 1817, 1901, 2026
MaeII ACGT 1 cut(s) 507
MaeIII GTNAC 5 cut(s) 534, 937, 1097, 1129, 1360
MalI GATC 4 cut(s) 339, 759, 906, 1320
MboI GATC 4 cut(s) 337, 757, 904, 1318
MboII GAAGA 7 cut(s) 365, 377, 686, 740, 785, 1460, 1841
MhlI GDGCHC 3 cut(s) 113, 362, 1849
MlsI TGGCCA 3 cut(s) 146, 326, 1662
MluCI AATT 7 cut(s) 95, 330, 525, 639, 813, 1085, 1290
MluI ACGCGT 1 cut(s) 892
MluNI TGGCCA 3 cut(s) 146, 326, 1662
MmeI TCCRAC 2 cut(s) 863, 1743
Mox20I TGGCCA 3 cut(s) 146, 326, 1662
Mph1103I ATGCAT 1 cut(s) 1339
MroI TCCGGA 1 cut(s) 232
MroNI GCCGGC 1 cut(s) 185
MroXI GAANNNNTTC 1 cut(s) 1542
MscI TGGCCA 3 cut(s) 146, 326, 1662
MseI TTAA 5 cut(s) 257, 827, 984, 1379, 1964
MslI CAYNNNNRTG 2 cut(s) 332, 555
Msp20I TGGCCA 3 cut(s) 146, 326, 1662
MspA1I CMGCKG 1 cut(s) 1139
MspCI CTTAAG 1 cut(s) 826
MspI CCGG 3 cut(s) 186, 233, 493
MspR9I CCNGG 5 cut(s) 563, 713, 1164, 1187, 1551
Mva1269I GAATGC 1 cut(s) 845
MvaI CCWGG 5 cut(s) 563, 713, 1164, 1187, 1551
MvnI CGCG 3 cut(s) 395, 480, 894
MwoI GCNNNNNNNGC 8 cut(s) 251, 260, 551, 842, 1681, 1844, 1935, 1959
NaeI GCCGGC 1 cut(s) 187
NdeI CATATG 1 cut(s) 1007
NdeII GATC 4 cut(s) 337, 757, 904, 1318
NgoMIV GCCGGC 1 cut(s) 185
NlaIV GGNNCC 4 cut(s) 491, 1329, 1748, 1889
NmuCI GTSAC 1 cut(s) 937
NruI TCGCGA 2 cut(s) 395, 480
NsiI ATGCAT 1 cut(s) 1339
NspV TTCGAA 1 cut(s) 817
PagI TCATGA 1 cut(s) 1569
PasI CCCWGGG 1 cut(s) 1550
PciSI GCTCTTC 1 cut(s) 1854
PctI GAATGC 1 cut(s) 845
PdiI GCCGGC 1 cut(s) 187
PdmI GAANNNNTTC 1 cut(s) 1542
PfeI GAWTC 5 cut(s) 207, 306, 405, 979, 1205
PflMI CCANNNNNTGG 1 cut(s) 1163
PfoI TCCNGGA 1 cut(s) 711
PkrI GCNGC 8 cut(s) 133, 348, 475, 1138, 1145, 1876, 1879, 1955
Psp124BI GAGCTC 1 cut(s) 1849
Psp1406I AACGTT 1 cut(s) 507
Psp6I CCWGG 5 cut(s) 561, 711, 1162, 1185, 1549
PspEI GGTNACC 1 cut(s) 1097
PspGI CCWGG 5 cut(s) 561, 711, 1162, 1185, 1549
PspN4I GGNNCC 4 cut(s) 491, 1329, 1748, 1889
PspPI GGNCC 2 cut(s) 230, 1888
PstI CTGCAG 1 cut(s) 1138
PstNI CAGNNNCTG 1 cut(s) 1163
PvuII CAGCTG 1 cut(s) 1139
RigI GGCCGGCC 1 cut(s) 189
RruI TCGCGA 2 cut(s) 395, 480
RsaI GTAC 7 cut(s) 152, 266, 491, 737, 1257, 1525, 1995
RsaNI GTAC 7 cut(s) 151, 265, 490, 736, 1256, 1524, 1994
RseI CAYNNNNRTG 2 cut(s) 332, 555
SacI GAGCTC 1 cut(s) 1849
SapI GCTCTTC 1 cut(s) 1854
SaqAI TTAA 5 cut(s) 257, 827, 984, 1379, 1964
SatI GCNGC 8 cut(s) 132, 347, 474, 1137, 1144, 1875, 1878, 1954
Sau3AI GATC 4 cut(s) 337, 757, 904, 1318
Sau96I GGNCC 2 cut(s) 230, 1888
ScrFI CCNGG 5 cut(s) 563, 713, 1164, 1187, 1551
SduI GDGCHC 3 cut(s) 113, 362, 1849
SfaNI GCATC 3 cut(s) 845, 1346, 1947
SfcI CTRYAG 1 cut(s) 1134
SfuI TTCGAA 1 cut(s) 817
SinI GGWCC 1 cut(s) 230
SmiMI CAYNNNNRTG 2 cut(s) 332, 555
SmlI CTYRAG 2 cut(s) 826, 1676
SmoI CTYRAG 2 cut(s) 826, 1676
Sse9I AATT 7 cut(s) 95, 330, 525, 639, 813, 1085, 1290
SsiI CCGC 5 cut(s) 5, 91, 600, 962, 1684
SspI AATATT 1 cut(s) 1429
SspMI CTAG 7 cut(s) 168, 678, 953, 1170, 1817, 1901, 2026
SstI GAGCTC 1 cut(s) 1849
StyD4I CCNGG 5 cut(s) 561, 711, 1162, 1185, 1549
StyI CCWWGG 3 cut(s) 277, 748, 1948
TaaI ACNGT 2 cut(s) 943, 1672
TaiI ACGT 1 cut(s) 510
TaqI TCGA 2 cut(s) 817, 1941
TasI AATT 7 cut(s) 95, 330, 525, 639, 813, 1085, 1290
TatI WGTACW 4 cut(s) 150, 735, 1255, 1523
TfiI GAWTC 5 cut(s) 207, 306, 405, 979, 1205
Tru1I TTAA 5 cut(s) 257, 827, 984, 1379, 1964
Tru9I TTAA 5 cut(s) 257, 827, 984, 1379, 1964
TscAI CASTG 3 cut(s) 141, 942, 1540
TseFI GTSAC 1 cut(s) 937
TseI GCWGC 8 cut(s) 131, 346, 473, 1136, 1143, 1874, 1877, 1953
Tsp45I GTSAC 1 cut(s) 937
TspDTI ATGAA 9 cut(s) 73, 298, 1012, 1033, 1425, 1558, 1586, 2007, 2011
TspGWI ACGGA 2 cut(s) 377, 1117
TspRI CASTG 3 cut(s) 141, 942, 1540
Van91I CCANNNNNTGG 1 cut(s) 1163
Vha464I CTTAAG 1 cut(s) 826
VpaK11BI GGWCC 1 cut(s) 230
XapI RAATTY 2 cut(s) 639, 813
XbaI TCTAGA 4 cut(s) 167, 677, 1169, 1816
XcmI CCANNNNNNNNNTGG 1 cut(s) 284
XmnI GAANNNNTTC 1 cut(s) 1542
XspI CTAG 7 cut(s) 168, 678, 953, 1170, 1817, 1901, 2026
Zsp2I ATGCAT 1 cut(s) 1339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.