Rh2AG052000

PP-loop family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0008644
Physical Location & Seq
Reverse (-)
4081388 .. 4084997
3610 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG052000.1

Sequence Viewer

Length: 2046 bp
ATGGCGGGAGGGGTTATCCTATCGTCCCAAACCACAACCCAAACCTTACTCTTTTCCATTCCCAAAATACCCTTCCCACTATCACTATGGAAGCTCCCCTTCATTTCCCGCCAATTTTCCTGCAAGTGCTCTCAAACCACCCAAGTCGCAGCAGTGGACTTGGCCAAGTACAAAGAAGCTTTCTCTAGACGGATGGACATGGCCGGCCTCAAACCCCACCACCGAATCGCTATTGGAGTTTCTGGAGGTCCGGATAGTATGGCCTTGTGTGCTTTAACTGCGTACTGGAAAGGACAAGGGTATGATGGTAAATGTGATGAGGGATTCATTGATGGGGTTTTGGCTATAATTGTGGATCATGGGCTGCGTGAAGAGAGCGCGGAAGAGGCCAGCATTGTTTCCAATCGTGTCGCGAAAATGGGAATCAGAAGTGATGTTGCCTGTTGTGATTGGGAGGATGGTAAGCCGAAACAAGGTCATGTGCAAGAATCAGCTCGCGAAATGAGGTACCAGATATTTCAGAACGTTTGTATCAAGAACCAGATTGGTGTGTTACTTACGGCACATCATGCTGATGACCAGGCTGAGTTATTTGTTATCAGACTATCTCGCAATAGCGGTATTCTTGGACTTGCTGGTATGCCTTTCACATCTCAAATTTTCTCCTCGCACACCCATTCTCATACTGAAGTTTCTAGAAACAATGGTATTCTTCTTGTGAGACCCCTCCTGGATTTTTCAAAAGAAGATATGTACAAGATATGCCAAGGGAGTGATCAGGAATGGGTGGAAGACCCAACAAATCAAAGCCTGTTATATGCTCGTAATAGAATTCGAATGTCCTTAAGGGACGCATCATGTGCATTCAAAAATGAGCTACAAGCAGTTATTACTGCTTGTCGGAAAACACGCGTATATATTGATCATGTTTGCCGTGCTTTGATGTCTAAAGCAGTGACCGTTTCTCATCTAGGATATGCGGTTATTGATTTAGAGATTCTTAATCAATCAAAAGTGGAGGACATATGCCTGTCAAAGTTCATTTCCTTAGTTTTGCAGTTCATCTCACAAAGGCACAGACCACTTAGAGGTAATACTTCAAAATTGCTTGTTGGTTACCTGCGTAGTTTCCCATGCAAGACATCTGTTACTGCAGCTGGCTGCTTTCTTTCTCCAGCTCCTGGGTCTAGAGGCACAAAAGCCCTGGTGTGCTGTTCTGTTGATTCTCCTCTGCCTTCAAATATAGGGTTATCCTATCAACACTTTCAAGCAGTACAAGAACACTCTACTCCAGATGAGATAGAGCAAATTATCGCTGATGGCAAATCCTATGCAGATCACTTGGTTCCAAATGCATCAGATGTGCCTTTCTTAGAAGTAACATCTAAATCAGTTTTAACTGAAGCGAGGAGGCTTGGTATGATTAGTGAGGCAACCCATACAAATATTCTTTCATTGCAGAAGGAAGAGATTGAGCATTTCAAGTCCAAGAGTGAAGTAAAAGCTGACTACAAATCAAAGCATGGAGTCAAATCTATTAGTACATCACCCAGTGAACCACTTCCCCCAGGGCAAATATGTTGCTTCATGAACCGATTTTTTATCACATGGAAACTGAGTGAAGTTTCTGAGGAAGCTTTGGAGGGGGAAAGTCGGTGTGGTGGCAAATCTTGTATTGGCCATGACACAGTGCTTGAGGTGCGGAACATGAGCGAACAGGATTGGCTTTATCTTTCCGACTTGTCAAAGTCTCATACTTTGGGGAACCTTCAAGAACAAAGCAACTCTTTGGATAGGAAGGTAGAACAAAGAAAAGAGGAGACAGACACATCTCTAGACTATGCAAGGATTTCAGCACAAAGAGCTCTTCAATCCCTGAAATCTATTCCTGCTGCTGCAAGAAGGGGGCTGCCTGTTCTGGTCAATAATCAAGGACTTCTGCTAAGCATACCAAGCATTGACTTCCAAGGCTGCTCATGCTTAATGGTCTCTGCGACATTCAAGCCAAAAGTACCACTTGGGGGAGACCATAGTTCGTTCATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ATP_bind_3

Protein Analysis

681

Amino Acids

75.21

Weight (kDa)

7.76

Isoelectric Point (pI)

47.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATP_bind_3 PF01171 76 - 280 1.5e-51 PP-loop domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1128
Acc65I GGTACC 1 cut(s) 507
AccB1I GGYRCC 1 cut(s) 507
AccB7I CCANNNNNTGG 1 cut(s) 1181
AccII CGCG 4 cut(s) 380, 413, 498, 912
AccIII TCCGGA 1 cut(s) 250
AciI CCGC 6 cut(s) 5, 109, 380, 618, 980, 1702
AclI AACGTT 1 cut(s) 525
AclWI GGATC 1 cut(s) 363
AcoI YGGCCR 3 cut(s) 162, 201, 1678
AcsI RAATTY 2 cut(s) 657, 831
AcuI CTGAAG 2 cut(s) 708, 1422
AdeI CACNNNGTG 1 cut(s) 1553
AfaI GTAC 7 cut(s) 170, 284, 509, 755, 1275, 1543, 2013
AfiI CCNNNNNNNGG 4 cut(s) 473, 1088, 1181, 2021
AflII CTTAAG 1 cut(s) 844
AflIII ACRYGT 1 cut(s) 910
AgsI TTSAA 9 cut(s) 741, 868, 1101, 1239, 1268, 1483, 1772, 1871, 2002
AjnI CCWGG 5 cut(s) 579, 729, 1180, 1203, 1567
AjuI GAANNNNNNNTTGG 2 cut(s) 56, 88
AluBI AGCT 9 cut(s) 94, 179, 494, 877, 1157, 1178, 1505, 1637, 1865
AluI AGCT 9 cut(s) 94, 179, 494, 877, 1157, 1178, 1505, 1637, 1865
Alw21I GWGCWC 2 cut(s) 131, 1867
Alw26I GTCTC 5 cut(s) 715, 1755, 1814, 1993, 2019
AlwI GGATC 1 cut(s) 363
AlwNI CAGNNNCTG 1 cut(s) 1181
Aor13HI TCCGGA 1 cut(s) 250
AoxI GGCC 6 cut(s) 162, 201, 205, 261, 387, 1678
ApeKI GCWGC 8 cut(s) 149, 364, 1154, 1161, 1892, 1895, 1909, 1971
ApoI RAATTY 2 cut(s) 657, 831
Asp700I GAANNNNTTC 1 cut(s) 1560
Asp718I GGTACC 1 cut(s) 507
AspLEI GCGC 1 cut(s) 380
AspS9I GGNCC 1 cut(s) 248
AsuHPI GGTGA 1 cut(s) 1539
AsuII TTCGAA 1 cut(s) 835
AvaII GGWCC 1 cut(s) 248
BaeI ACNNNNGTAYC 2 cut(s) 514, 547
BalI TGGCCA 2 cut(s) 164, 1680
BanI GGYRCC 1 cut(s) 507
BanII GRGCYC 1 cut(s) 1867
BbsI GAAGAC 1 cut(s) 798
Bbv12I GWGCWC 2 cut(s) 131, 1867
BbvI GCAGC 8 cut(s) 161, 351, 1148, 1166, 1879, 1882, 1896, 1958
BccI CCATC 5 cut(s) 187, 299, 326, 452, 1313
BceAI ACGGC 2 cut(s) 576, 918
BciT130I CCWGG 5 cut(s) 581, 731, 1182, 1205, 1569
BclI TGATCA 2 cut(s) 775, 922
BcoDI GTCTC 5 cut(s) 715, 1755, 1814, 1993, 2019
BfaI CTAG 6 cut(s) 186, 696, 971, 1188, 1835, 2044
BfmI CTRYAG 1 cut(s) 1152
BfrI CTTAAG 1 cut(s) 844
BfuAI ACCTGC 1 cut(s) 1128
BisI GCNGC 8 cut(s) 150, 365, 1155, 1162, 1893, 1896, 1910, 1972
BlpI GCTNAGC 1 cut(s) 1943
BlsI GCNGC 8 cut(s) 151, 366, 1156, 1163, 1894, 1897, 1911, 1973
Bme1390I CCNGG 5 cut(s) 581, 731, 1182, 1205, 1569
Bme18I GGWCC 1 cut(s) 248
BmgT120I GGNCC 1 cut(s) 248
BmiI GGNNCC 3 cut(s) 509, 1347, 1766
BmrFI CCNGG 5 cut(s) 581, 731, 1182, 1205, 1569
BmrI ACTGGG 1 cut(s) 1545
BmsI GCATC 2 cut(s) 863, 1364
BmuI ACTGGG 1 cut(s) 1545
BpiI GAAGAC 1 cut(s) 798
BpmI CTGGAG 3 cut(s) 264, 1158, 1275
Bpu1102I GCTNAGC 1 cut(s) 1943
Bpu14I TTCGAA 1 cut(s) 835
BpuEI CTTGAG 1 cut(s) 1715
BsaI GGTCTC 3 cut(s) 715, 1993, 2019
BsaJI CCNNGG 6 cut(s) 766, 1181, 1203, 1567, 1568, 1966
BsaWI WCCGGW 1 cut(s) 250
BsaXI ACNNNNNCTCC 2 cut(s) 1402, 1432
Bsc4I CCNNNNNNNGG 4 cut(s) 473, 1088, 1181, 2021
Bse118I RCCGGY 1 cut(s) 203
Bse1I ACTGG 2 cut(s) 290, 1551
Bse3DI GCAATG 1 cut(s) 1454
BseAI TCCGGA 1 cut(s) 250
BseBI CCWGG 5 cut(s) 581, 731, 1182, 1205, 1569
BseDI CCNNGG 6 cut(s) 766, 1181, 1203, 1567, 1568, 1966
BseGI GGATG 2 cut(s) 198, 463
BseLI CCNNNNNNNGG 4 cut(s) 473, 1088, 1181, 2021
BseMI GCAATG 1 cut(s) 1454
BseMII CTCAG 3 cut(s) 576, 1607, 1620
BseNI ACTGG 2 cut(s) 290, 1551
BseRI GAGGAG 4 cut(s) 655, 1218, 1423, 1832
BseXI GCAGC 8 cut(s) 161, 351, 1148, 1166, 1879, 1882, 1896, 1958
Bsh1236I CGCG 4 cut(s) 380, 413, 498, 912
BshFI GGCC 6 cut(s) 164, 203, 207, 263, 389, 1680
BshNI GGYRCC 1 cut(s) 507
BsiHKAI GWGCWC 2 cut(s) 131, 1867
BsiSI CCGG 2 cut(s) 204, 251
BslFI GGGAC 2 cut(s) 10, 863
BslI CCNNNNNNNGG 4 cut(s) 473, 1088, 1181, 2021
BsmAI GTCTC 5 cut(s) 715, 1755, 1814, 1993, 2019
BsmFI GGGAC 2 cut(s) 10, 863
BsmI GAATGC 1 cut(s) 863
BsnI GGCC 6 cut(s) 164, 203, 207, 263, 389, 1680
Bso31I GGTCTC 3 cut(s) 715, 1993, 2019
Bsp119I TTCGAA 1 cut(s) 835
Bsp1286I GDGCHC 2 cut(s) 131, 1867
Bsp13I TCCGGA 1 cut(s) 250
Bsp1407I TGTACA 1 cut(s) 753
Bsp143I GATC 4 cut(s) 355, 775, 922, 1336
Bsp1720I GCTNAGC 1 cut(s) 1943
Bsp68I TCGCGA 2 cut(s) 413, 498
BspACI CCGC 6 cut(s) 5, 109, 380, 618, 980, 1702
BspANI GGCC 6 cut(s) 164, 203, 207, 263, 389, 1680
BspCNI CTCAG 3 cut(s) 577, 1608, 1621
BspEI TCCGGA 1 cut(s) 250
BspFNI CGCG 4 cut(s) 380, 413, 498, 912
BspHI TCATGA 1 cut(s) 1587
BspLI GGNNCC 3 cut(s) 509, 1347, 1766
BspMAI CTGCAG 1 cut(s) 1156
BspMI ACCTGC 1 cut(s) 1128
BspPI GGATC 1 cut(s) 363
BspQI GCTCTTC 1 cut(s) 1872
BspT104I TTCGAA 1 cut(s) 835
BspT107I GGYRCC 1 cut(s) 507
BspTI CTTAAG 1 cut(s) 844
BspTNI GGTCTC 3 cut(s) 715, 1993, 2019
BsrDI GCAATG 1 cut(s) 1454
BsrFI RCCGGY 1 cut(s) 203
BsrGI TGTACA 1 cut(s) 753
BsrI ACTGG 2 cut(s) 290, 1551
BssAI RCCGGY 1 cut(s) 203
BssECI CCNNGG 6 cut(s) 766, 1181, 1203, 1567, 1568, 1966
BssMI GATC 4 cut(s) 355, 775, 922, 1336
BssT1I CCWWGG 2 cut(s) 766, 1966
Bst2UI CCWGG 5 cut(s) 581, 731, 1182, 1205, 1569
Bst4CI ACNGT 2 cut(s) 961, 1690
Bst6I CTCTTC 4 cut(s) 366, 378, 1461, 1872
BstAFI CTTAAG 1 cut(s) 844
BstAPI GCANNNNNTGC 2 cut(s) 569, 860
BstAUI TGTACA 1 cut(s) 753
BstBI TTCGAA 1 cut(s) 835
BstC8I GCNNGC 4 cut(s) 205, 391, 496, 1159
BstDEI CTNAG 7 cut(s) 585, 1048, 1085, 1372, 1616, 1629, 1943
BstEII GGTNACC 1 cut(s) 1115
BstF5I GGATG 2 cut(s) 198, 463
BstFNI CGCG 4 cut(s) 380, 413, 498, 912
BstHHI GCGC 1 cut(s) 380
BstKTI GATC 4 cut(s) 358, 778, 925, 1339
BstMAI GTCTC 5 cut(s) 715, 1755, 1814, 1993, 2019
BstMBI GATC 4 cut(s) 355, 775, 922, 1336
BstMWI GCNNNNNNNGC 9 cut(s) 269, 278, 386, 569, 860, 1699, 1862, 1953, 1977
BstNI CCWGG 5 cut(s) 581, 731, 1182, 1205, 1569
BstPI GGTNACC 1 cut(s) 1115
BstSCI CCNGG 5 cut(s) 579, 729, 1180, 1203, 1567
BstSFI CTRYAG 1 cut(s) 1152
BstUI CGCG 4 cut(s) 380, 413, 498, 912
BstV1I GCAGC 8 cut(s) 161, 351, 1148, 1166, 1879, 1882, 1896, 1958
BstV2I GAAGAC 1 cut(s) 798
BsuRI GGCC 6 cut(s) 164, 203, 207, 263, 389, 1680
BtsCI GGATG 2 cut(s) 198, 463
BtsI GCAGTG 2 cut(s) 159, 960
BtsIMutI CAGTG 4 cut(s) 159, 960, 1558, 1695
BtuMI TCGCGA 2 cut(s) 413, 498
BveI ACCTGC 1 cut(s) 1128
Cac8I GCNNGC 4 cut(s) 205, 391, 496, 1159
CaiI CAGNNNCTG 1 cut(s) 1181
CciI TCATGA 1 cut(s) 1587
CfoI GCGC 1 cut(s) 380
Cfr10I RCCGGY 1 cut(s) 203
Cfr13I GGNCC 1 cut(s) 248
CseI GACGC 1 cut(s) 860
Csp6I GTAC 7 cut(s) 169, 283, 508, 754, 1274, 1542, 2012
CviQI GTAC 7 cut(s) 169, 283, 508, 754, 1274, 1542, 2012
DdeI CTNAG 7 cut(s) 585, 1048, 1085, 1372, 1616, 1629, 1943
DpnI GATC 4 cut(s) 357, 777, 924, 1338
DpnII GATC 4 cut(s) 355, 775, 922, 1336
DraIII CACNNNGTG 1 cut(s) 1553
EaeI YGGCCR 3 cut(s) 162, 201, 1678
Eam1104I CTCTTC 4 cut(s) 366, 378, 1461, 1872
EarI CTCTTC 4 cut(s) 366, 378, 1461, 1872
Ecl136II GAGCTC 1 cut(s) 1865
Eco130I CCWWGG 2 cut(s) 766, 1966
Eco24I GRGCYC 1 cut(s) 1867
Eco31I GGTCTC 3 cut(s) 715, 1993, 2019
Eco47I GGWCC 1 cut(s) 248
Eco53kI GAGCTC 1 cut(s) 1865
Eco57I CTGAAG 2 cut(s) 708, 1422
Eco91I GGTNACC 1 cut(s) 1115
EcoICRI GAGCTC 1 cut(s) 1865
EcoO65I GGTNACC 1 cut(s) 1115
EcoRI GAATTC 1 cut(s) 831
EcoRII CCWGG 5 cut(s) 579, 729, 1180, 1203, 1567
EcoT14I CCWWGG 2 cut(s) 766, 1966
EcoT22I ATGCAT 1 cut(s) 1357
EcoT38I GRGCYC 1 cut(s) 1867
ErhI CCWWGG 2 cut(s) 766, 1966
FalI AAGNNNNNCTT 6 cut(s) 83, 115, 1771, 1803, 2001, 2033
FaqI GGGAC 2 cut(s) 10, 863
FauI CCCGC 1 cut(s) 116
FauNDI CATATG 1 cut(s) 1025
FbaI TGATCA 2 cut(s) 775, 922
Fnu4HI GCNGC 8 cut(s) 150, 365, 1155, 1162, 1893, 1896, 1910, 1972
FokI GGATG 2 cut(s) 205, 470
FriOI GRGCYC 1 cut(s) 1867
FseI GGCCGGCC 1 cut(s) 207
Fsp4HI GCNGC 8 cut(s) 150, 365, 1155, 1162, 1893, 1896, 1910, 1972
FspBI CTAG 6 cut(s) 186, 696, 971, 1188, 1835, 2044
GlaI GCGC 1 cut(s) 379
GluI GCNGC 8 cut(s) 150, 365, 1155, 1162, 1893, 1896, 1910, 1972
GsuI CTGGAG 3 cut(s) 264, 1158, 1275
HaeIII GGCC 6 cut(s) 164, 203, 207, 263, 389, 1680
HapII CCGG 2 cut(s) 204, 251
HgaI GACGC 1 cut(s) 860
HhaI GCGC 1 cut(s) 380
Hin6I GCGC 1 cut(s) 378
HinP1I GCGC 1 cut(s) 378
HindIII AAGCTT 2 cut(s) 177, 1635
HinfI GANTC 7 cut(s) 225, 324, 423, 488, 997, 1223, 1527
HpaII CCGG 2 cut(s) 204, 251
HphI GGTGA 1 cut(s) 1539
Hpy166II GTNNAC 2 cut(s) 157, 1556
Hpy188I TCNGA 7 cut(s) 428, 522, 602, 903, 1360, 1630, 1738
Hpy8I GTNNAC 2 cut(s) 157, 1556
HpyAV CCTTC 7 cut(s) 82, 109, 1245, 1456, 1778, 1792, 1896
HpyCH4III ACNGT 2 cut(s) 961, 1690
HpyCH4IV ACGT 1 cut(s) 525
HpyF10VI GCNNNNNNNGC 9 cut(s) 269, 278, 386, 569, 860, 1699, 1862, 1953, 1977
HpyF3I CTNAG 7 cut(s) 585, 1048, 1085, 1372, 1616, 1629, 1943
HpySE526I ACGT 1 cut(s) 525
HspAI GCGC 1 cut(s) 378
Kpn2I TCCGGA 1 cut(s) 250
KpnI GGTACC 1 cut(s) 511
KroI GCCGGC 1 cut(s) 203
KroNI GCCGGC 1 cut(s) 205
Ksp22I TGATCA 2 cut(s) 775, 922
Kzo9I GATC 4 cut(s) 355, 775, 922, 1336
LguI GCTCTTC 1 cut(s) 1872
LmnI GCTCC 2 cut(s) 99, 1183
Lsp1109I GCAGC 8 cut(s) 161, 351, 1148, 1166, 1879, 1882, 1896, 1958
LweI GCATC 2 cut(s) 863, 1364
MaeI CTAG 6 cut(s) 186, 696, 971, 1188, 1835, 2044
MaeII ACGT 1 cut(s) 525
MaeIII GTNAC 5 cut(s) 552, 955, 1115, 1147, 1378
MalI GATC 4 cut(s) 357, 777, 924, 1338
MboI GATC 4 cut(s) 355, 775, 922, 1336
MboII GAAGA 7 cut(s) 383, 395, 704, 758, 803, 1478, 1859
MhlI GDGCHC 2 cut(s) 131, 1867
MlsI TGGCCA 2 cut(s) 164, 1680
MluCI AATT 6 cut(s) 113, 348, 657, 831, 1103, 1308
MluI ACGCGT 1 cut(s) 910
MluNI TGGCCA 2 cut(s) 164, 1680
MlyI GAGTC 1 cut(s) 1536
MmeI TCCRAC 2 cut(s) 881, 1761
Mox20I TGGCCA 2 cut(s) 164, 1680
Mph1103I ATGCAT 1 cut(s) 1357
MroI TCCGGA 1 cut(s) 250
MroNI GCCGGC 1 cut(s) 203
MroXI GAANNNNTTC 1 cut(s) 1560
MscI TGGCCA 2 cut(s) 164, 1680
MseI TTAA 5 cut(s) 275, 845, 1002, 1397, 1982
MslI CAYNNNNRTG 1 cut(s) 573
Msp20I TGGCCA 2 cut(s) 164, 1680
MspA1I CMGCKG 1 cut(s) 1157
MspCI CTTAAG 1 cut(s) 844
MspI CCGG 2 cut(s) 204, 251
MspR9I CCNGG 5 cut(s) 581, 731, 1182, 1205, 1569
Mva1269I GAATGC 1 cut(s) 863
MvaI CCWGG 5 cut(s) 581, 731, 1182, 1205, 1569
MvnI CGCG 4 cut(s) 380, 413, 498, 912
MwoI GCNNNNNNNGC 9 cut(s) 269, 278, 386, 569, 860, 1699, 1862, 1953, 1977
NaeI GCCGGC 1 cut(s) 205
NdeI CATATG 1 cut(s) 1025
NdeII GATC 4 cut(s) 355, 775, 922, 1336
NgoMIV GCCGGC 1 cut(s) 203
NlaIV GGNNCC 3 cut(s) 509, 1347, 1766
NmuCI GTSAC 1 cut(s) 955
NruI TCGCGA 2 cut(s) 413, 498
NsiI ATGCAT 1 cut(s) 1357
NspV TTCGAA 1 cut(s) 835
PagI TCATGA 1 cut(s) 1587
PasI CCCWGGG 1 cut(s) 1568
PciSI GCTCTTC 1 cut(s) 1872
PctI GAATGC 1 cut(s) 863
PdiI GCCGGC 1 cut(s) 205
PdmI GAANNNNTTC 1 cut(s) 1560
PfeI GAWTC 6 cut(s) 225, 324, 423, 488, 997, 1223
PflMI CCANNNNNTGG 1 cut(s) 1181
PfoI TCCNGGA 1 cut(s) 729
PkrI GCNGC 8 cut(s) 151, 366, 1156, 1163, 1894, 1897, 1911, 1973
PleI GAGTC 1 cut(s) 1535
PpsI GAGTC 1 cut(s) 1535
Psp124BI GAGCTC 1 cut(s) 1867
Psp1406I AACGTT 1 cut(s) 525
Psp6I CCWGG 5 cut(s) 579, 729, 1180, 1203, 1567
PspEI GGTNACC 1 cut(s) 1115
PspGI CCWGG 5 cut(s) 579, 729, 1180, 1203, 1567
PspN4I GGNNCC 3 cut(s) 509, 1347, 1766
PspPI GGNCC 1 cut(s) 248
PstI CTGCAG 1 cut(s) 1156
PstNI CAGNNNCTG 1 cut(s) 1181
PvuII CAGCTG 1 cut(s) 1157
RigI GGCCGGCC 1 cut(s) 207
RruI TCGCGA 2 cut(s) 413, 498
RsaI GTAC 7 cut(s) 170, 284, 509, 755, 1275, 1543, 2013
RsaNI GTAC 7 cut(s) 169, 283, 508, 754, 1274, 1542, 2012
RseI CAYNNNNRTG 1 cut(s) 573
SacI GAGCTC 1 cut(s) 1867
SapI GCTCTTC 1 cut(s) 1872
SaqAI TTAA 5 cut(s) 275, 845, 1002, 1397, 1982
SatI GCNGC 8 cut(s) 150, 365, 1155, 1162, 1893, 1896, 1910, 1972
Sau3AI GATC 4 cut(s) 355, 775, 922, 1336
Sau96I GGNCC 1 cut(s) 248
SchI GAGTC 1 cut(s) 1536
ScrFI CCNGG 5 cut(s) 581, 731, 1182, 1205, 1569
SduI GDGCHC 2 cut(s) 131, 1867
SfaNI GCATC 2 cut(s) 863, 1364
SfcI CTRYAG 1 cut(s) 1152
SfuI TTCGAA 1 cut(s) 835
SinI GGWCC 1 cut(s) 248
SmiMI CAYNNNNRTG 1 cut(s) 573
SmlI CTYRAG 2 cut(s) 844, 1694
SmoI CTYRAG 2 cut(s) 844, 1694
Sse9I AATT 6 cut(s) 113, 348, 657, 831, 1103, 1308
SsiI CCGC 6 cut(s) 5, 109, 380, 618, 980, 1702
SspI AATATT 1 cut(s) 1447
SspMI CTAG 6 cut(s) 186, 696, 971, 1188, 1835, 2044
SstI GAGCTC 1 cut(s) 1867
StyD4I CCNGG 5 cut(s) 579, 729, 1180, 1203, 1567
StyI CCWWGG 2 cut(s) 766, 1966
TaaI ACNGT 2 cut(s) 961, 1690
TaiI ACGT 1 cut(s) 528
TaqI TCGA 1 cut(s) 835
TasI AATT 6 cut(s) 113, 348, 657, 831, 1103, 1308
TatI WGTACW 4 cut(s) 168, 753, 1273, 1541
TfiI GAWTC 6 cut(s) 225, 324, 423, 488, 997, 1223
Tru1I TTAA 5 cut(s) 275, 845, 1002, 1397, 1982
Tru9I TTAA 5 cut(s) 275, 845, 1002, 1397, 1982
TscAI CASTG 4 cut(s) 159, 960, 1558, 1695
TseFI GTSAC 1 cut(s) 955
TseI GCWGC 8 cut(s) 149, 364, 1154, 1161, 1892, 1895, 1909, 1971
Tsp45I GTSAC 1 cut(s) 955
TspDTI ATGAA 8 cut(s) 91, 316, 1030, 1051, 1443, 1576, 1604, 2029
TspGWI ACGGA 1 cut(s) 205
TspRI CASTG 4 cut(s) 159, 960, 1558, 1695
Van91I CCANNNNNTGG 1 cut(s) 1181
Vha464I CTTAAG 1 cut(s) 844
VpaK11BI GGWCC 1 cut(s) 248
XapI RAATTY 2 cut(s) 657, 831
XbaI TCTAGA 4 cut(s) 185, 695, 1187, 1834
XcmI CCANNNNNNNNNTGG 1 cut(s) 84
XmnI GAANNNNTTC 1 cut(s) 1560
XspI CTAG 6 cut(s) 186, 696, 971, 1188, 1835, 2044
Zsp2I ATGCAT 1 cut(s) 1357
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.